These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9183#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1088 fasta sequence [CGCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTAAAATCTCTACAGGATTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATT-AAAG-AAACCCCAA-A-CAGTTAAGGAAAAAGATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC-AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTC-----ACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCG-A-ATGATA-CGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACATCGTCCACCGCGGTACAGCCGTTCGACGATCTTGTGCACCATGCACGC-TCGGACGAATTAACCAGTCCAGTAGGCCAAC] [-] EMBL CNS09DM3 [CGCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTAAAATCTCTACAGGATTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATT AAAG AAACCCCAA A CAGTTAAGGAAAAAGATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTC ACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCG C A AATA CGCAAATCCATGcc ] [+] EMBL BM593715 [ ccgTTTTTAAATCTCTACAGGATTGCCACTATTTATTTCGTCCATCGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTGGCTTAGGTTCATTACAAAAATCACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGCTAGAATGAGCACTATT AAAGAAAAACCGAACAGCAGTTAGGGAATACGATAGCGAAGAGTGCATGGGAAATGGGGTAACTGGTCTGATCAACCGCGTGAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAACAAAATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGAGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGAGTTTAAAACGTATTGGAATCACCATAGTGTTACATCGTTTGTTCCTGCTACCTGCCGTCTACCTTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGCCGCGTGGCCGTTGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCA ] [-] EMBL CNS08UCH [ ATCTCTACAGGATTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATT AAAG AAACCCCAA A CAGTTAAGGAAAAAGATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTC ACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCGTATATG TA CGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACATCGTCCACCGCGGTACAGCCGTTCGACGATCTTGTGCACCATGCACGC TCGGACG ] [+] EMBL CNS08UCI [ TTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATT AAAG AAACCCCAA A CAGTTAAGGAAAAAGATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTC ACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCG A ATGCTA CGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACATCGTCCACCGCGGTACAGCCGTTCGACGATCTTGTGCACCATGCACGCTTCGGACGAATTAACCAGTCCAGTAGGCCAAC] [-] EMBL CNS08DUK [ ATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAAG AAACCCCAA A CAGTTAAGGAAAAAGATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACATATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTC ACCCGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATTTTTTTGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGC ] [-] EMBL CNS09G83 [ cgtTCGTCGTCGGCGTCTTTAT GCG TGTAA TA TG CCTC C GCG GT GCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGACAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAGTCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCC ] [-] EMBL CNS08XBD [ CTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCG A AATTTACCGCACCTGCA ] consensusID : consensus_9183#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 939 fasta sequence [ACTTTATTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAG-AAACCCCAA-A-CAGTTAAGGAAAAAG-ATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC-AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTCACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGAAAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACAAAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATTTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCGAATGCTACGCACCTGCATGCCAGTGGGCCAACAG] [+] EMBL CNS09DM4 [ACTTTATTGCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAG AAACCCCAA A CAGTTAAGGAAAAAG ATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTCACCTGCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGAAAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACAAAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATTTTGGGCGGTTCCAGCATGGCCGCATCGAATGTACGCCGAATGCTACGCACCTGCATGCCAGTGGGCCAACAG] [-] EMBL BM594938 [ ATTGCCACTATTTATTTCGTCCATCGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTGGCTTAGGTTCATTACACAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGCTAGAATGAGCACTATTAAAGAAAAACCGAACAGCAGTTAGGGAATACG ATAGCGAAGAGTGCATGGGAAATGGGGTAACTGGTCTGATCAACCGCGTGAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAACAAAATTGCGGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGAGACATGTAGAATGAAAGTACGATCAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGAGTTTAAAACGTATTGGAATCACCATAGTGTTACATCGTTTGTTCACCTGCCATCTACCTTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGCCGAGTGGCCGTTGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCgg ] [+] EMBL CNS08DUL [ TTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAG AAACCCCAA A CAGTTAAGGAAAAAGCATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACATATTAAACTAAAGTGACATGTAGAATGAAAGTACGATCAATTAAAATTCAATTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGATTTTAAAACGTATCGGAATCACCGTAGTGTTACATTGTTTGTTCACCCGCCGAAAAAAAAAAAAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCAGCGCCACTTTCGCGCGAGAAAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGACATAAGCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATTTTGGGCGGTT ] [+] EMBL CNS09G84 [ TTATTTCGTCCAACGTGTCATTTCTTTAAGAAGATGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAG AAACCCCAA A CAGTTAAGGAAAAAG ATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAATTCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAAC AGATTGCGGTTTTCAGCAAAGAACCAAACA ] [-] EMBL CNS08LP4 [ TGGTAAGCTCTTTGTTGCTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGTCCCTAAACCAACACGGTAGAATGAGCACTATTAAAG AAACCCCAA A CAGTTAAGGAAAAAG ATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTA ] consensusID : consensus_9183#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 783 fasta sequence [TGTCATTTTGCTTTTAGAAGATGTGTAAGCTCTTTGTGTGGGCNTTGAGGTTCATGTACACNTTATTGAGCGGATATAGGGTGGCNACATATNTTGCCTCNTCTAGTGTATTTTNTCACGCGTGTTCCGCGTTGAACCATACCACGTGCTAGTANATGAGCACCTATTAAAGGAAAAACCGATACACGCAGTTAGGGTATACGATAGCGATAGAGTNNNCATGGGANATGGGTGTAACTGCTCTGATCAACCGCGTGAAGCTGANAGTTCTTGTAATACCCNTAATCGNTTACTTAGACAATAGTATAAATCTTATGTTGACGATGACGTACGGATAGATTGGGCGGTTTTTCANAGCCANATAGAACCCGNTGTACTACANAGNNTAATANTAAAGTAGACATGTTAGGAATGNAATAGTTACGGTATCATAGTTNTAGATATTCAGANNTCAAATGTGCTAACACTGTCCAAGNATATCTCCTGGTTGCTTTTCTCTCGAGTTTGAATACGTATTGGAATCACCATAGTGTTACATCGTTTGTTCACGCTGGCCATCTACCTTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCACTCACGCCGTAGTGGCCGTTGAAACGTTTCGCATAAATGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGTACGCGCATCCACGTTTAATCGTGACCAGCAGGTTCGGATGCCGATTACTATTAATCCNTGG] [-] EMBL AL931046 [TGTCATTTTGCTTTTAGAAGATGTGTAAGCTCTTTGTGTGGGCNTTGAGGTTCATGTACACNTTATTGAGCGGATATAGGGTGGCNACATATNTTGCCTCNTCTAGTGTATTTTNTCACGCGTGTTCCGCGTTGAACCATACCACGTGCTAGTANATGAGCACCTATTAAAGGAAAAACCGATACACGCAGTTAGGGTATACGATAGCGATAGAGTNNNCATGGGANATGGGTGTAACTGCTCTGATCAACCGCGTGAAGCTGANAGTTCTTGTAATACCCNTAATCGNTTACTTAGACAATAGTATAAATCTTATGTTGACGATGACGTACGGATAGATTGGGCGGTTTTTCANAGCCANATAGAACCCGNTGTACTACANAGNNTAATANTAAAGTAGACATGTTAGGAATGNAATAGTTACGGTATCATAGTTNTAGATATTCAGANNTCAAATGTGCTAACACTGTCCAAGNATATCTCCTGGTTGCTTTTCTCTCGAGTTTGAATACGTATTGGAATCACCATAGTGTTACATCGTTTGTTCACGCTGGCCATCTACCTTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCACTCACGCCGTAGTGGCCGTTGAAACGTTTCGCATAAATGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGTACGCGCATCCACGTTTAATCGTGACCAGCAGGTTCGGATGCCGATTACTATTAATCCNTGG] consensusID : consensus_9183#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 657 fasta sequence [TTACATTCGTTTGNTTTCACCTGCCATCTACCTTTCTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGCCGAGTGGCCGTTGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGTACGCGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATTACTATCAGTGCCACTTTCGCGCGAGATAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGAGATAAGCACTGGATGAGCGAACCGTCGACACGATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAAGGTACGCCGAATGCTGCGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACACCGTTCCCCGCGGTACAACCGTTCGACGATCCT---NA-CGTGC-CGATTCTGCCTAATTAAACCAGGACGGGCTGTCCGGCGACTGTTTGTTCGTGCCGTCGATGCCACAGAAGAAGAATCCTTTGCGTGAATCCTCCGAGCTGTTTACCTGNGGGGA] [-] EMBL BX467198 [TTACATTCGTTTGNTTTCACCTGCCATCTACCTTTCTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAATTATTGCCCTCACGCCGAGTGGCCGTTGAAACGTTTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTTGTAGTACGCGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATTACTATCAGTGCCACTTTCGCGCGAGATAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGAGATAAGCACTGGATGAGCGAACCGTCGACACGATGATCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAAGGTACGCCGAATGCTGCGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACACCGTTCCCCGCGGTACAACCGTTCGACGATCCT NA CGTGC CGATTCTGCCT ] [-] EMBL AL692162 [ TTCGGATTGCCGATTACTATCAGTGCCACTTTCGCGCGAGATAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTTGGAATCGTGTGCGAGATAAGCACTGGATGAGCGAACCGTCGACACGATGATCACTTTGCGCTCCTGGCCATGGAATTCTTCCACCGAGCCAATCTTGGGCGGTTCCAGCATGGCCGCATCGAAGGTACGCCGAATGCTGCGCACCTGCATGACGTACGGTGTGATAATGCCGATATCGGCCGGACCACACCGTTCCCCGCGGTACAACCGTTCGACGATCTTGTGCACCATGCACGCTTCGGCCGAATTAAACCAGGACGGGCTGTCCGGCGACTGTTTGTTCGTGCCGTCGATGCCACAGAAGAAGAATCCTTTGCGTGAATCCTCCGAGCTGTTTACCTGNGGGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9183#0 CGCCGCCCGGGCACATGTGGCCTTTTTTTTTTTTTTTTAAAATCTCTACAGGATTGCCAC 60 consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 ------------------------------------------------------------ consensus_9183#2 ------------------------------------------------------------ consensus_9183#0 TATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCTCTTTGTTGCTTAGG 120 consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 ------------------------------------------------------------ consensus_9183#2 ------------------------------------------------------------ consensus_9183#0 TTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCCGCGTGT 180 consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 ------------------------------------------------------------ consensus_9183#2 ------------------------------------------------------------ consensus_9183#0 CCCTAAACCAACACGGTAGAATGAGCACTATTAAAGAAACCCCAAACAGTTAAGGAAAAA 240 consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 ------------------------------------------------------------ consensus_9183#2 ------------------------------------------------------------ consensus_9183#0 GATGACGTAGAGTGCATGGGAAACGGGGTAACTGGTCTGATCAACCGCGTAAAGCGAAAT 300 consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 ------------------------------------------------------------ consensus_9183#2 ------------------------------------------------------------ consensus_9183#0 TCTTGAAAGCAAATCGAAATTAACAATAGTATAAATCTTATGTTACATACAACAGATTGC 360 consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 ------------------------------------------------------------ consensus_9183#2 ------------------------------------------------------------ consensus_9183#0 GGTTTTCAGCAAAGAACCAAACACATTAAACTAAAGTGACATGTAGAATGAAAGTACGAT 420 consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 ------------------------------------------------------------ consensus_9183#2 ------------------------------------------------------------ consensus_9183#0 CAATTAAAATTCAACTCAATTCTAACACTGTCCAAAATCTCCTGGTTGCTTTTCTCTCGA 480 consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 ----------------------------------------------------ACTTTATT 8 consensus_9183#2 -----------------------------------------------------------T 1 consensus_9183#0 TTTTAAAACGTATCGGAATCACCGTAGTGTTACATT-GTTTGTT--CACCTGCCGTCCAC 537 consensus_9183#3 -----------------------------TTACATTCGTTTGNTTTCACCTGCCATCTAC 31 consensus_9183#1 GCCACTATTTATTTCGTCCAACGTGTCATTTCTTTTAGAAGATGGTAAGCT-CTTTGTTG 67 consensus_9183#2 GTCATT-TTGCTTTTAGAAGATGTGTAAGCTCTTTGTGTGGGCNTTGAGGT-TCATGTAC 59 * * * * * * consensus_9183#0 -CGTTTTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAA 596 consensus_9183#3 -CTTTCTAGTACTGATACTCATCGTCTTCGTCGTCGTCGTCGTCATACTGGCGCTGTAAA 90 consensus_9183#1 CTTAGGTTCATTACAAAAATTACGGATATATTTGCAACAATTTCCTCCTCATGTATTTCC 127 consensus_9183#2 ACNTTATTGAGCGGATATAGGGTGGCNACATATNTTGCCTCNTCTAGTGTATTTTNTCAC 119 * * * * * * ** * consensus_9183#0 TTATTGCCC--------TCACGGCGCGTGGCCGATGAAACGTTTCGCAAAATGGCCGACC 648 consensus_9183#3 TTATTGCCC--------TCACGCCGAGTGGCCGTTGAAACGTTTCGCAAAATGGCCGACC 142 consensus_9183#1 GCGTGTCCC----TAAACCA----ACACGGTAG--AATGAGCAC-TATTAAAG--AAACC 174 consensus_9183#2 GCGTGTTCCGCGTTGAACCATACCACGTGCTAGTANATGAGCACCTATTAAAGGAAAAAC 179 * ** ** * * * * ** * * * consensus_9183#0 CGA-GCGTACACCCACAGTAAGTGCCATCG-TCCAGCGCTCGTTGTAG-CACACGCATCC 705 consensus_9183#3 CGA-GCGTACACCCACAGTAAGTGCCATCG-TCCAGCGCTCGTTGTAG-TACGCGCATCC 199 consensus_9183#1 C----CAAACAGTTAAGGAAAAAGATGACG-TAGAGTGCA--TGGGAAACGGG-GTAACT 226 consensus_9183#2 CGATACACGCAGTTAGGGTATACGATAGCGATAGAGTNNNCATGGGANATGGGTGTAACT 239 * * ** * * * * ** * ** * * * * * * consensus_9183#0 ACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCG-ATCACTATCAGC--GCCACTTTCG 762 consensus_9183#3 ACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCG-ATTACTATCAGT--GCCACTTTCG 256 consensus_9183#1 GG-TCTGATCAACCGCGTAAAGC--GAAATTCTTGAAAG----CAAATCGA--AATTA-A 276 consensus_9183#2 GC-TCTGATCAACCGCGTGAAGCTGANAGTTCTTGTAATACCCNTAATCGNTTACTTAGA 298 * * *** ** *** ** * * * * ** consensus_9183#0 CGCGAG-ACAGAGCT-ACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTT 820 consensus_9183#3 CGCGAG-ATAGAGCT-ACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAATCTTGGTGTT 314 consensus_9183#1 CAATAGTATAAATCTTATGTT-------ACATACA-ACAGATTG--CGGTTTTCAGCAA- 325 consensus_9183#2 CAATAGTATAAATCTTATGTTGACGATGACGTACGGATAGATTGGGCGGTTTTTCANAGC 358 * ** * * * ** * *** **** * * * consensus_9183#0 GGAATCGTGTGCGACATAA-GCACTGGATGAGCGAACCGTCGACACAATGATCACTTTGC 879 consensus_9183#3 GGAATCGTGTGCGAGATAA-GCACTGGATGAGCGAACCGTCGACACGATGATCACTTTGC 373 consensus_9183#1 -----AGAACC---------AAACACATTAA-ACTAAAGT-GACATGT--AGAATGAAAG 367 consensus_9183#2 CANATAGAACCCGNTGTACTACANAGNNTAATANTAAAGTAGACATGTTAGGAATGNAAT 418 * * * * * ** **** * consensus_9183#0 GCTCCTGGCCCTGGAATTCT-----TCCACCGAGCCAAT---CTTGGGCGGTTCCAGCAT 931 consensus_9183#3 GCTCCTGGCCCTGGAATTCT-----TCCACCGAGCCAAT---CTTGGGCGGTTCCAGCAT 425 consensus_9183#1 ---TACGAT----CAATTAAA---ATTCA--ACTCAATT---CTAACACTGTCCAAAA-- 410 consensus_9183#2 AGTTACGGTATCATAGTTNTAGATATTCAGANNTCAAATGTGCTAACACTGTCCAAGNAT 478 * * ** * ** * * * ** * ** * * consensus_9183#0 GGCCGC--ATCGAATGTACGCCGAAT---GATACGCACCTGCATGACGTACGGTGTGATA 986 consensus_9183#3 GGCCGC--ATCGAAGGTACGCCGAAT---GCTGCGCACCTGCATGACGTACGGTGTGATA 480 consensus_9183#1 -TCTCCTGGTTGCTTTTCTCTCGATTTTAAA-ACGTATCGGAATCAC-CGTAGTGTTACA 467 consensus_9183#2 ATCTCCTGGTTGCTTTTCTCTCGAGTTTGAATACGTATTGGAATCAC-CATAGTGTTACA 537 * * * * * *** * ** * * ** ** **** * * consensus_9183#0 ATGCCGATATCGGCCGGACCACATCGTCCACCGCGGTACAGCCGTTCGACGATCTTG-TG 1045 consensus_9183#3 ATGCCGATATCGGCCGGACCACACCGTTCCCCGCGGTACAACCGTTCGACGATCCTNACG 540 consensus_9183#1 TTGTTTGTTCACCT--GCCGTCCACCGTTTTAGTACTGATACTCATCGTCTTCGTCGTCG 525 consensus_9183#2 TCGTTTGTTCACGCTGGCCATCTACCTTTTTAGTACTGATACTCATCGTCTTCGTCGTCG 597 * * * * * * * * * *** * * consensus_9183#0 C-ACCA--TGCACGCTCGGACGAATTAACCAGTCCAGT-AGG--CCAAC----------- 1088 consensus_9183#3 T-GCCG--ATTCTGCCTAATTAAACCAGGACGGGCTGT-CCG--GCGACTGTTTGTTCGT 594 consensus_9183#1 TCGTCGTCATACTGGCGCTGTAAATTATTGCC-CTCACGGCGC-GTGGCCGATGAAACGT 583 consensus_9183#2 TCGTCGTCATACTGGCGCTGTAAATTATTGCCACTCACGCCGTAGTGGCCGTTGAAACGT 657 * * ** * * * consensus_9183#0 ------------------------------------------------------------ consensus_9183#3 GCCG--TCGATGCCACAGAAGAAGAATCCTTTGCGTGAAT-CCTCCGAGCTGTTTACCTG 651 consensus_9183#1 TTCGCAAAATGGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTT 643 consensus_9183#2 TTCGCATAAATGCCGACCCGAGCGTACACCCACAGTAAGTGCCATCGTCCAGCGCTCGTT 717 consensus_9183#0 ------------------------------------------------------------ consensus_9183#3 NGGGGA------------------------------------------------------ 657 consensus_9183#1 GTAGCACACGCATCCACGTTTTATCGGTGGCCAGCAGCTTCGGATTGCCGATCACTATCA 703 consensus_9183#2 GTAGTACGCGCATCCACGTTTAATCG-TGACCAGCAGGTTCGGAT-GCCGATTACTATTA 775 consensus_9183#0 ------------------------------------------------------------ consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 GCGCCACTTTCGCGCGAGAAAGAGCTACGTTAATGCGCTTGGGGGCCGAGATAAAGCCAA 763 consensus_9183#2 ATCCNTGG---------------------------------------------------- 783 consensus_9183#0 ------------------------------------------------------------ consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 TCTTGGTGTTGGAATCGTGTGCGACAAAAGCACTGGATGAGCGAACCGTCGACACAATGA 823 consensus_9183#2 ------------------------------------------------------------ consensus_9183#0 ------------------------------------------------------------ consensus_9183#3 ------------------------------------------------------------ consensus_9183#1 TCACTTTGCGCTCCTGGCCCTGGAATTCTTCCACCGAGCCAATTTTGGGCGGTTCCAGCA 883 consensus_9183#2 ------------------------------------------------------------ consensus_9183#0 -------------------------------------------------------- consensus_9183#3 -------------------------------------------------------- consensus_9183#1 TGGCCGCATCGAATGTACGCCGAATGCTACGCACCTGCATGCCAGTGGGCCAACAG 939 consensus_9183#2 -------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||