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Anopheles gambiae
cluster # 9190 cluster # 9190       Sequences # 15       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9190#0 length = 1023 sequences # 14  
consensus_9190#1 length = 583 sequences # 1  

consensusID : consensus_9190#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 1023
fasta sequence
                              [AGAACTGTTGGCCTACTGGGTTGTGACTTGGACAAAATCGTCCC-GCACCCG-AGCGAAGAAGAGAGCGTGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACT-GGA-GCAAAACC-TA-GAGT--GGAC-GGC-GGAA-GA-GGAAGCGCAG-TGTTTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTG-TGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCGATTGCAAAGCGACGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGAC-GGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACAGCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAGGACGCAAAAGATGGTGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCACGACAGTGGACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCACAGAGCCGGGTCATTCGAACGCTTCCAGTCCGGCAAACACCCCACCGAACGGACCGAGCACGAAGCGACGACGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGTTGGAGTGCTGATGTAAATAT-CTTTAACGTAAGAATTATAGGTGGTTTACGAGGATGGCTGCGCGCATGTTACGAACAATCAGAATTGTTTGCGTGAAAATATGTATTAATTTTCCATCCGCATGGAATGAATTATGAAAAGGAAAATGAATTAAATATGAATACCGAAAGCCAAAAAAAAAAAAAAAGGCCACAT]

[-] EMBL CNS09JNC             [AGAACTGTTGGCCTACTGGGTTGTGACTTGGACAAAATCGTCCC GCACCCG AGCGAAGAAGAGAGCGTGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACT GGA GCAAAACC TA GAGT  GGAC GGC GGAA GA GGAAGCGCAGCTG TTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTG TGGGACGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCGATTGCAAAGCGACGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGAC GGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACAGCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAGGACGCAAAAGATGGTGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCACGACAGTGGACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCACAGAGCCGGGTCATTCGAACGCTTCCAGTCCGGCAAACACCCCACCGAACGGACCGAGCACGAAGCGACGACGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGTTGGAGTGCTGATGTAAATAT CTTTAACGTAAGAATTATAGGTGGTTTACGAGGATGG  GCGCGCATGTTACGAACAATCAGAATTGTTTGCGTGAAAATATGTATTAATTTTCCATCCGCATGGAATGAATTATGAAAAGGAAAATGAATTAAAT                                       ]
[+] EMBL CNS096RO             [            aggctttGTTGTGACTTGGACAAAATCGTCCC GCACCCG AGCGAAGAAGAGAGCGTGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACT GGA GCAAAACC TA GAGT  GGAC GGC GGAA GA GGAAGCGCAC TGTCTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTG TGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGGGTTCTGCTTACCGGAATCGGAATTTAGTGCTGCGATTGCAAAGCGACGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGACGGGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACAGCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAGGACGCAAAAGATGGTGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCACGACAGTGGACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCACAG                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS092TI             [                     TGTG TTTGGACAAAATCGTCCC GCACCCG AGCGAAGAAGAGAGCGTGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACT GGA GCAAAACC TA GAGT  GGAC GGC GGAA GA GGAAGCGCAC TGTTTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTG TGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCGATTGCAAAGCGACGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGAC GGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAGCAGCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAGGACGCAAAAGATGGTGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCACGACAGTGAACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCACAGAGCCGGGTCATTCGAACGCTTCCAGTTCGGCAAACACCCCACCGAACGGACCGAGCACGAAGCGACGACGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGTTGGAGTTCTGATGTAAATAT CTTTAACGTAAGAATTATAGGTGGTTTACGAGGATGGCTGCGCGCATGTAACGAACAATCAGAATTGTTTGCGTGAAAATATGTACTAATTTTCCATCCGCATGGAATGAATTATGAAAAGGAAAATGAATTA                                          ]
[+] EMBL CNS09J87             [                     TGTGACTTGGACAAAATCGTCCC GCACCCG AGCGAAGAAGAGAGCGTGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACTGGGAGGCAAAACCTTAGGAGTTGGGACGGGCGGGAAGGAGGGAAGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09HFG             [                           TTGGACAAAATCGTCCC GCACCCG AGCGAAGAAGAGAGCGTGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACT GGA GCAAAACC TA GAGT  GGAC GGC GGAA GA GGAAGCGCAC TGTTTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTG TGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCGATTGCAAAGCGACGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGAC GGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACAGCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAGGACGCAAAAGATGGTGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCACGACAGTGAACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCACAGAGCCGGGTCATTCGAACGCTTCCAGTCCGGCAAACACCCCACCGAACGGACCGAGCACGAAGCGACGACGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGTTGGAGTGCTGATGTAAATAT CTTTAACGTAAGAATTATAGGTGGTTTAAGAGGATGGCTGCGCGCATGTTAAGAACAATCAGAATTGTTTG                                                                                                        ]
[+] EMBL CNS09JNB             [                             GGACAAAATCGT CC GCACCCG AGCGAAGAAGAAAGCGTGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACT GGA GCAAAACC TA GAGT  GGAC GGC GGAA GA GGAAGCGCAG TGTTTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTG TGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCGATTGGAAAGCGACGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGAC GGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACAGCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAGGACGCAAAAGATGGTGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCACGACAGTGAACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCACAGAGCCGGGTCATTCGAACGCTTCCAGTCCGGCAAACACCCCACCGAACGGACCGAGCACGAAGCGACGACGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGTTGGAGTGCTGATGTAAATAT CTTTAACGTAAGAATTATAGGTGGTTTACGAGGATGGCTGCGCGCATGTTACGAACAATCAGAATTGTTTGCGTGAAAATATGTATTAATTTTCCATCCGCATGGAATGAATTATGAAAAGGAAAATGAATTAAATATGAATACCGAAAGCCAAAAAAAAAAAAAAAGGCCACAT]
[+] EMBL CNS09IMF             [                                      gcTCCCGGCACCCGCAGCGAAGAAGAGAGCGTGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACT GGA GCAAAACC TA GAGT  GGAC GGC GGAA GA GGAAGCGCAG TGTTTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTG TGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCGATTGCAAAGCGACGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCA CGAC GGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACAGCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAGGACGCAAAAGATGGTGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTTAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCACGACAGTGACCCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCACAGAGCCGGGTCATTCGAACGCTTCCAGTCCGGCAAACACCCCACCGAACGGACCGAGCACGAAGCGACGACGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGTTGGAGTGCTGATGTAAATAT CTTTAACGTAAGAATTATAGGTGGTTTACGAGGATGGCT                                                                                                                                        ]
[-] EMBL CNS092TJ             [                                                                     TGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACT GGA GCAAAACC TA GAGT  GGAC GGC GGAA GA GGAAGCGCAGCTG TTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTGTTGGAG GCTTTTCGCGCTCGCTGCAGCGGGAGTTCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCGATTGCAAAGCGACGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGAC GGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAGCAGCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAGGACGCAAAAGATGGTTACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCACGACAGTGGACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCACAGAGCCGGGTCATTCGAACGCTTCCAGTCCGGCAAACACCCCACCGAACGGACCGAGCACGAAGCGACGACGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGTTGGAGTGCTGATGTAAATAT CTTTAACGTAAGAATTATAGGTGGTTTACGAGGAT GCTGCGCGCATGTTACGAACAATCAGAATTGTTTGCGTGAAAATATGTACTAATTTTCCATCCGCATGGAATGAATTATGAAAAGGAAAATGAATTAAATATG ATACCGA                            ]
[+] EMBL BX611995             [                                                                                           CGACACCGTTGCCTTTATGGCGGCCGTGCGTGAAAAGCAAGAACT GGA GCAAAACC TA GAGT  GGAC GGC GGAA GA GGAAGCGCAGCTG TTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTG TGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCCATTGCAAAGCGACGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGAC GGTGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACATCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAAGACGCAAAAGATGGCGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAA                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX612268             [                                                                                                                        GTGAAAAGCAAGAACT GGA GCAAAACC TA GAGT  GGAC GGC GGAA GA GGAAGCGCAGCTG TTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTG TGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCCATTGCAAAGCGACGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGAC GGTGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACATCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAAGACGCAAAAGATGGCGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCCAAAAACAGCGACAACGCCGGAAACCACGACAGTGGACCGAAACGATCGCAGAAACGCACACGCGGTTCACTGTCCACGGAGCCGGGTCATT                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09IMG             [                                                                                                                                                                                                                                                                                                        GAAGCGGTCTGGTCGCATCTTCGCACCCTCTAAAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCGATTGAAAAGCGACGAAAGGAAAACGCCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS095X6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAGCACCGGG GGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACAGCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCTGACAGGACGCAAAAGATGGTGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCACGACATTGGACCGAAACGATCGCAGAAACGCACACGCGGATCATTGTCCACAGAGCCGGGTCATTCGAACGtt                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS09HFH             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCACCGAC GGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACAGCATTGAAAAAATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAGGACGCAAAAGATGGTGAAAAGGACGAAAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCACGACAGTGGACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCACAGAGCCGGGTCATTCGAACGCTTCCAGTCCGGCAAAAACCCCCCCGAACGGACCGAGCACGAAGCGACGACGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGTTGGAGTGCTGATGTAAATATGCTTTAACGTAAGAATTATAGGTGGTTTACGAGGATGG  GCGCGCATGTTACGAAAAATCAGAATTGTTTGCGTGAAAATATGTATTAAT                                                                                     ]
[-] EMBL CNS096RP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AC GGGGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACAACAGCATTGAAAACATCGGCGGCCAAAACACCCGTTCCCTCATCAGCCCGACAGGACGCAAAAGATGGTGACAAGGACGACAAGGACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAATCCGAAAAACAGCGACAACGCCGGAAACCACGACAGTGGACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCAAAGAGCCGGGTCATTCGAACGCTTCCAGTCCGGCAAACACCCCCCCGAACGGACCGAGCACGAAGCGACGACGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGTTGGAGTGCTGATGTAAATAT CTTTAACGTAAGAATTATAGGTGGTTTACGAGGATGG TGCGCGCATGTT                                                                                                                             ]


>consensus_9190#0 AGAACTGTTGGCCTACTGGGTTGTGACTTGGACAAAATCGTCCCGCACCCGAGCGAAGAA GAGAGCGTGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGT GAAAAGCAAGAACTGGAGCAAAACCTAGAGTGGACGGCGGAAGAGGAAGCGCAGTGTTTT CTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATT GTGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCAT CTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCGTG AGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCGATTGCAAAGCGA CGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGACGGGGGAACATGATTCCAAG AAGCCGGAAACTAAATCGGAAACAACAGCATTGAAAACATCGGCGGCCAAAACACCCGTT CCCTCATCAGCCCGACAGGACGCAAAAGATGGTGACAAGGACGACAAGGACGTTAAGGAT CGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAACGCCGGAAACCAC GACAGTGGACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCCACAGAGCCGGGT CATTCGAACGCTTCCAGTCCGGCAAACACCCCACCGAACGGACCGAGCACGAAGCGACGA CGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGTTGGAGTGCTGAT GTAAATATCTTTAACGTAAGAATTATAGGTGGTTTACGAGGATGGCTGCGCGCATGTTAC GAACAATCAGAATTGTTTGCGTGAAAATATGTATTAATTTTCCATCCGCATGGAATGAAT TATGAAAAGGAAAATGAATTAAATATGAATACCGAAAGCCAAAAAAAAAAAAAAAGGCCA CAT



consensusID : consensus_9190#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 583
fasta sequence
                              [GCAGAATCGCCACGAGNTTNTGTTGTGACTTGGACAAAATCATCCCGCACCGAGCGAAGAGAGCGTGCCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACTGGAGCAAAACCTAGAGTGGACGGCGGAAGAGGAAGCGCAGCTGTTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTGTGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTTCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCCATTGCAAAGCGACGGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGACGGTGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACGAAGCATCATTGAANAACATCGGCGGGCGGAAGAACACCCGTTCCCTCATCAGGCCCGAGCAAGANNGCAAAAGATGGCGA]

[+] EMBL BX467299             [GCAGAATCGCCACGAGNTTNTGTTGTGACTTGGACAAAATCATCCCGCACCGAGCGAAGAGAGCGTGCCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGAAAAGCAAGAACTGGAGCAAAACCTAGAGTGGACGGCGGAAGAGGAAGCGCAGCTGTTTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTGTGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTTCCTTTCGTGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCCATTGCAAAGCGACGGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGACGGTGGAACATGATTCCAAGAAGCCGGAAACTAAATCGGAAACGAAGCATCATTGAANAACATCGGCGGGCGGAAGAACACCCGTTCCCTCATCAGGCCCGAGCAAGANNGCAAAAGATGGCGA]


>consensus_9190#1 GCAGAATCGCCACGAGNTTNTGTTGTGACTTGGACAAAATCATCCCGCACCGAGCGAAGA GAGCGTGCCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGCGTGA AAAGCAAGAACTGGAGCAAAACCTAGAGTGGACGGCGGAAGAGGAAGCGCAGCTGTTTCT TGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCATTGT GGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGCATCT TCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTTCCTTTCGTGAG CGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCCATTGCAAAGCGACG GACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGACGGTGGAACATGATTCCAAGA AGCCGGAAACTAAATCGGAAACGAAGCATCATTGAANAACATCGGCGGGCGGAAGAACAC CCGTTCCCTCATCAGGCCCGAGCAAGANNGCAAAAGATGGCGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9190#0      --AGAACTGTTGGCCTACTGGGTTGTGACTTGGACAAAATCGTCCCGCACCCGAGCGAAG 58
consensus_9190#1      GCAGAATCGCCACGAGNTTNTGTTGTGACTTGGACAAAATCATCCCGCACC-GAGCGAAG 59
                        ****  *         *  ******************** ********* ********

consensus_9190#0      AAGAGAGCGTGGCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGC 118
consensus_9190#1      A---GAGCGTGCCAAACATTTTCCGTCCAATCGACACCGCTGCGATGATGGCGGCCGTGC 116
                      *   ******* ************************************************

consensus_9190#0      GTGAAAAGCAAGAACTGGAGCAAAACCTAGAGTGGACGGCGGAAGAGGAAGCGCAGTGTT 178
consensus_9190#1      GTGAAAAGCAAGAACTGGAGCAAAACCTAGAGTGGACGGCGGAAGAGGAAGCGCAGCTGT 176
                      ********************************************************   *

consensus_9190#0      TTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCA 238
consensus_9190#1      TTCTTGCCATGGACGGGGTGAAGCCGGTCGGCATCAACCGGCACTTCTTCATGGCGTGCA 236
                      ************************************************************

consensus_9190#0      TTGTGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGC 298
consensus_9190#1      TTGTGGAGCGCTTGTCGCGCTCGCTGCAGCGGGAGATCAGCAGTGAAGCGGTCTGGTCGC 296
                      ************************************************************

consensus_9190#0      ATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTCCCTTTCG 358
consensus_9190#1      ATCTTCGCACCCTCTACAACCTAAAAGCCCTGGACGAGCTGGAACCGCCGGTTCCTTTCG 356
                      **************************************************** *******

consensus_9190#0      TGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCGATTGCAAAGC 418
consensus_9190#1      TGAGCGATGAGAGCGAGTTCTGCTTGCCGGAATCGGAATTTAGTGCTGCCATTGCAAAGC 416
                      ************************************************* **********

consensus_9190#0      GACG-ACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGACGGGGGAACATGATTCC 477
consensus_9190#1      GACGGACAGGAAGACGCCGAGCGAGGTGGTGCAGCAGCACCGACGGTGGAACATGATTCC 476
                      **** ***************************************** *************

consensus_9190#0      AAGAAGCCGGAAACTAAATCGGAAACAA--CAGCATTGAAAA-CATCGGCGGCC---AAA 531
consensus_9190#1      AAGAAGCCGGAAACTAAATCGGAAACGAAGCATCATTGAANAACATCGGCGGGCGGAAGA 536
                      ************************** *  ** ******* * ********* *   * *

consensus_9190#0      ACACCCGTTCCCTCATCAG-CCCGAC--AGGACGCAAAAGATGGTGACAAGGACGACAAG 588
consensus_9190#1      ACACCCGTTCCCTCATCAGGCCCGAGCAAGANNGCAAAAGATGGCGA------------- 583
                      ******************* *****   **   *********** **             

consensus_9190#0      GACGTTAAGGATCGCGGCGAAACGGGTAGCAGTAAAATGAAGCCGAAAAACAGCGACAAC 648
consensus_9190#1      ------------------------------------------------------------
                                                                                  

consensus_9190#0      GCCGGAAACCACGACAGTGGACCGAAACGATCGCAGAAACGCACACGCGGATCACTGTCC 708
consensus_9190#1      ------------------------------------------------------------
                                                                                  

consensus_9190#0      ACAGAGCCGGGTCATTCGAACGCTTCCAGTCCGGCAAACACCCCACCGAACGGACCGAGC 768
consensus_9190#1      ------------------------------------------------------------
                                                                                  

consensus_9190#0      ACGAAGCGACGACGAATCTAACTTCTAATTTGTTCCTTGGAACAGAACAAGAAAGCTAGT 828
consensus_9190#1      ------------------------------------------------------------
                                                                                  

consensus_9190#0      TGGAGTGCTGATGTAAATATCTTTAACGTAAGAATTATAGGTGGTTTACGAGGATGGCTG 888
consensus_9190#1      ------------------------------------------------------------
                                                                                  

consensus_9190#0      CGCGCATGTTACGAACAATCAGAATTGTTTGCGTGAAAATATGTATTAATTTTCCATCCG 948
consensus_9190#1      ------------------------------------------------------------
                                                                                  

consensus_9190#0      CATGGAATGAATTATGAAAAGGAAAATGAATTAAATATGAATACCGAAAGCCAAAAAAAA 1008
consensus_9190#1      ------------------------------------------------------------
                                                                                  

consensus_9190#0      AAAAAAAGGCCACAT 1023
consensus_9190#1      ---------------
                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)