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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9196#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1720 fasta sequence
[AATGATGGTGGAAAGAAAAAGCAAGCAAAGCAGGTTTTGTCAATGCGCTTTGCATTTAATTAGTGTTTCGCTGAAAATTGATTATTTTCTACATACTCTTGGGATTGCCACGCGATATAATGTTAATTGTTCCATGTTCTACTGCTATATCAGAAGTTGGATGTGTAGTTCTCTATACACGAAAAGAATGTACTGTAATACTATTTAAAATTCTGTGCAATATAGGCTTATTTAATAGTTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTTGTTTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAATGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGACTAGCGTTCCTTAGCGGGGAGGCAGAAGGCTATCCGTTATGGCCTTAGTCTTTAAAATGGGGCTTTAAATATTTAAGCATACCAAAGGTACGGAATCGTTTTACACCAATCACTTTTCGCAGTTGTTCATCGC-AGATGGCAAACTGTCTGTTTTTCGGATCGTACAGATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCAGAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA-TCGTCGTCATCTTCCTCCT-CCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCCTCCAAGTTTGCATCCTTTAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGAAATAAGCTAAGCACTCGTTTTATGGCGGTGTGC-GGTTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGAAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATTTATGCACCTCGATGCAAGCGAGAGGCCGATTTTTTTTTGGGCGAAATGTGTACCGGGGTGCCAAAGACGCTTACTTCAGCGCTGCGTGCGG]
[-] EMBL BX626659 [AATGATGGTGGAAAGAAAAAGCAAGCAAAGCAGGTTTTGTCAATGCGCTTTGCATTTAATTAGTGTTTCGCTGAAAATTGATTATTTTCTACATACTCTTGGGATTGCCACGCGATATAATGTTAATTGTTCCATGTTCTACTGCTATATCAGAAGTTGGATGTGTAGTTCTCTATACACGAAAAGAATGTACTGTAATACTATTTAAAATTCTGTGCAATATAGGCTTATTTAATAGTTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTTGTTTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAATGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGACTAGCGTTCCTTAGCGGGGAGGCAGAAGGCTATCCGTTATGGCCTTAGTCTTTAAAATGGGGCTTTAAATATTTAAGCATACCA ]
[-] EMBL BM581307 [ CTGTGCAATATAGGCTTATTTAATAGTTGATTTTGTATGAAGACAATGTAAAATAGAGAAC TTTTTTTGTTTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAGTGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCcgg ]
[+] EMBL CNS08ZAM [ TTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTTGTTTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAATGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGACTAGCGTTCCTTAGCGGGGAGGCAGAAGGCTATCCGTTATGGCCTTAGTCTTTAAAATGGGGCTTTAAATATTTAAGCATACCAAAGGTACGGAATCGTTTTACACCAATCACTTTTCGCAGTTGTTCATCGC AGATGGCAAACTGTCTGTTTTTCGGATCGTACAGATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTTATTTGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTGGCCTTA ]
[+] EMBL CNS09K2O [ gggatgTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTTGTTTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAATGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGTCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGACTAGCGTTCCTTAGCGGGGAGGCAGAAGGCTATCCGTTATGGCCTTAGTCTTTAAAATGGGGCTTTAAATATTTAAGCATACCAAAGGTACGGAATCGTTTTACACCAATCACTTTTCGCAGTTGTTCATCGCGAGATGGCAAACTGTCTGTTTTTCGGATCGTACAGATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCAGAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACC ]
[+] EMBL CNS09I7S [ ACGATGAGAACGCACCCGATAGTTATGTACACGAAATGTGTAAAATACACTACAGCTTCGTAACCTCGGGCCTTACTGTCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAA ]
[-] EMBL BM600668 [ AGATGGCAAACTGTCTGTTTTTCGGATCGTACAGATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCAGAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTcgg ]
[-] EMBL CNS09K2N [ CTGTTTTTCGGATCGTACAGATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCAGAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGT CCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTACGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCCTCCAAGTTTGCATCCTTTAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGAAATAAGCTAAGCACTCGTTTTATGGCGGTGTGC GGTTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGAAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTC ]
[-] EMBL BM655402 [ GATTACGTTCCTTAATGATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCCGCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCACCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCAGAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACcgg ]
[-] EMBL BM585266 [ CTTGCCGCCTTGCCTTTCCCACTGCCCTTGGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGTGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCCTCCAGGTTGGCATCCTTAAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTCTACAATAGTAATAAGCTAAGCACTCGTTTTATGGCGGTGTGC GGTTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGGAGCTGCAAGAGTTTGTTGGGTGAAAAACcgg ]
[-] EMBL CNS08ZAL [ GCACTCTTACGTTCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCA TCGTCGTCATCTTCCTCCT CCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTACGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCCTCCAAGTTTGCATCCTTTAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAAAAATAAGCTAAGCACTCGTTTTATGGCGGTGTGCGGGTTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGAAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTC ]
[-] EMBL BM601781 [ TACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATTCGTCGTCATCTTCCTCCTCCCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTACGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCCTCCAAGTTTGCATCCTTTAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGAAATAAGCTAAGCACTCGTTTTATGGCGGTGTGC GGTTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGAAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATTTATGCACCTCGATGCAAGCGAGAGGCCGATTTTTTTTTGGGCGAAATGTGTACCGGGGTGCCAAAGACGCTTACTTCAGCGCTGCGTGCGG]
consensusID : consensus_9196#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 688 fasta sequence
[CCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCCTCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCCTCCAGGTTGGCATCCTTAAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCGGTTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGGAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATCGGACGCGTGGGCGG]
[-] EMBL BM587857 [CCTTTGGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCCTCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCCTCCAGGTTGGCATCCTTAAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCGGTTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGGAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATCGGACGCGTGGGCGG]
consensusID : consensus_9196#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 682 fasta sequence
[TTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCCTCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCAT-GATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCCTCCAGGTTGGCATCCTTAAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCGGTTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGGAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATTTATGCACCTCGATGCAAGCGAGCCCACGCGTCCGCGG]
[-] EMBL BM607507 [TTATCATCATCGCCGGAATCGTCCTCACTGTTGGAGGCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTCTTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCCTCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTGTTACCCTTGCCGTTACCTGCAT GATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTGGAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCCTCCAGGTTGGCATCCTTAAGAATTTTTTGAATTTCAGCCTTAAGCTCAGCTTTCGTCGGATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCGGTTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACTGCAGGAGCTGCAAGAGTTTGTTGAGTGAAAAACTCTAGCGAAATAATTCACGAACGTGCTCGAAGATGCCGATTTATGCACCTCGATGCAAGCGAGCCCACGCGTCCGCGG]
[-] EMBL CNS09I7R [ TTTTTGTTACCCTTGCCGTTACCTGCATGGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCGGAGGAAGCTTGTGAATTTACGTAGTCC ]
consensusID : consensus_9196#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 619 fasta sequence
[AAGATGATACGCTTACAAAATTAGTTTATTGCATGTGTATTTTGTATTACACTTTCGTAGGGGAATTCGCAATGATGGTTGAAATGAAAAAGCAAGCAAAGCAGGTTTTGTCAATGCGCTTTGCATTTAATTAGTTTTTCGCTGAAAATTGATTATTTTCTACATACTCTTGGGATTGCCACGCGATATAATGTTAATTGTTCCATGTTCTACTGCTATATCAGAAGTTGGATGTGTAGTTCACTATACACGAAAAGAATGTACTGTAATACTATTTAAAATTCTGTGCAATATAGGCTTATTTAATAGTTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTGTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAGTGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGCGGACGCGTGGGCGG]
[-] EMBL BM601092 [AAGATGATACGCTTACAAAATTAGTTTATTGCATGTGTATTTTGTATTACACTTTCGTAGGGGAATTCGCAATGATGGTTGAAATGAAAAAGCAAGCAAAGCAGGTTTTGTCAATGCGCTTTGCATTTAATTAGTTTTTCGCTGAAAATTGATTATTTTCTACATACTCTTGGGATTGCCACGCGATATAATGTTAATTGTTCCATGTTCTACTGCTATATCAGAAGTTGGATGTGTAGTTCACTATACACGAAAAGAATGTACTGTAATACTATTTAAAATTCTGTGCAATATAGGCTTATTTAATAGTTGATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTGTTGCTTAAATCATATAACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAGTGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTTACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGCGGACGCGTGGGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 AATGATGGTGGAAAGAAAAAGCAAGCAAAGCAGGTTTTGTCAATGCGCTTTGCATTTAAT 60
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 TAGTGTTTCGCTGAAAATTGATTATTTTCTACATACTCTTGGGATTGCCACGCGATATAA 120
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 TGTTAATTGTTCCATGTTCTACTGCTATATCAGAAGTTGGATGTGTAGTTCTCTATACAC 180
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 GAAAAGAATGTACTGTAATACTATTTAAAATTCTGTGCAATATAGGCTTATTTAATAGTT 240
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 GATTTTGTATGAAGACAATGTAAAATAGAGAACTTTTTTTTGTTTTGCTTAAATCATATA 300
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 ACCGTATATCCGCTGTCGTAGGTTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCA 360
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 CCCGATAGTAATGTACACGAAATGTGTAAAAAACACTACAGCTTCGTAACCTCGGGCCTT 420
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 ACTGCCCAAATGCACTATTGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGA 480
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 GCAATTAAGTATGACTCGTACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGACTA 540
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 GCGTTCCTTAGCGGGGAGGCAGAAGGCTATCCGTTATGGCCTTAGTCTTTAAAATGGGGC 600
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 TTTAAATATTTAAGCATACCAAAGGTACGGAATCGTTTTACACCAATCACTTTTCGCAGT 660
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 TGTTCATCGCAGATGGCAAACTGTCTGTTTTTCGGATCGTACAGATTACGTTCCTTAATG 720
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 ATGGCCCACATTTTCTTCACCACCTCATGTCGTGGCAATGACTCCGCACCGCACACTTCC 780
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 GCCAGTTCTGGAGATAGTGTGTACGGTCGTGTGTAGCCATTTGATCTCTTGGCACCACCA 840
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 ------------------------------------------------------------
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 CCACCACCAGCAGCCTTCTTAGCCTTAGCTGCCGGTTTGGTTTGCTTCCAGTCTCCGTCA 900
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 -------------------------------------------------------CCTTT 5
consensus_9196#2 ------------------------------------------------------------
consensus_9196#0 GAATCCGAGTCGGAATTGTTCTTTTTCTTACTTGCCGCCTTGCCCTTCCCACTGCCCTTT 960
consensus_9196#3 ------------------------------------------------------------
consensus_9196#1 GGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAG 65
consensus_9196#2 ------------------------TTATCATCATCGCCGGAATCGTCCTCACTGTTGGAG 36
consensus_9196#0 GGGTTGTAGTCGTCATCGCTACCCTTATCATCATCGCCGGAATCGTCCTCACTGTTGGAG 1020
consensus_9196#3 -----------------------------------------------------------A 1
consensus_9196#1 GCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTC 125
consensus_9196#2 GCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTC 96
consensus_9196#0 GCGCGTCTCTTCTTCTTGGCCGGGCCCCGTTTGGCCGGGGTGCCGCGCTTTCCGGCACTC 1080
consensus_9196#3 AGATGATACGCTTACAAAATTAG----TTTATTGCATGTGTATTTTGTATTACA-CTTTC 56
* * * * * * * ** * ** * ** * * **
consensus_9196#1 TTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCC 185
consensus_9196#2 TTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCC 156
consensus_9196#0 TTACGTCCCTTCGGTTTCTCTTCCTCGGAGAAATCTTCATCATCGTCGTCATCTTCCTCC 1140
consensus_9196#3 GTAGGGGAATTCGCAATGATGGTTGAAATGAAAAAGCAAGCAAAGCAGGTTTTGTCAATG 116
** * **** * **** * ** * * * **
consensus_9196#1 TCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTG 245
consensus_9196#2 TCCTCATCCTCTTCGTCATCTTCATAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTG 216
consensus_9196#0 TCCTCATCCTCTTCGTCATCTTCGTAGTCACTGTTACCTTTGGCTTTTTTGTCCTTTTTG 1200
consensus_9196#3 CGCTT-TGCATTTAATTAGTTTT----TCGCTG--AAAATTGATTATTTTCTACATACTC 169
** * * ** * * ** ** *** * *** * **** * * * *
consensus_9196#1 TTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCG 305
consensus_9196#2 TTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCG 276
consensus_9196#0 TTACCCTTGCCGTTACCTGCATGATCATCGTCCTCCTCATCGTCATCTTCCTCTCCCTCG 1260
consensus_9196#3 TTGGGATTGCCAC--GCGATATAATGTTAATTGTTC----CATGTTCTACTGCTATATCA 223
** ***** * ** ** * * * * * * *** * ** **
consensus_9196#1 GAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTG 365
consensus_9196#2 GAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTG 336
consensus_9196#0 GAGGAAGCTTGTGAATTTACGTAGTCCATCACGAGTTCATCCACCTCCTTTTTGCGATTG 1320
consensus_9196#3 GAAGTTGGATGTGTAGTT-CACTATACACGAAAAGAATGTAC-----TGTAATACTATTT 277
** * * **** * ** * * ** * ** * * * * * ***
consensus_9196#1 GAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCC 425
consensus_9196#2 GAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTCGCTGCTGTTTCC 396
consensus_9196#0 GAAAGATCGCACTTCAAATTCTTTTCCAGCTGTAGACGCACCTTCTTGGCTGCTGTTTCC 1380
consensus_9196#3 AAAATTCTGTGCAATATAGGCTTATTTAATAGTTGA-------TTTTGTATGAAGACAAT 330
*** * * * * *** * * ** ** * ** ** *
consensus_9196#1 TCCAGGTTGGCATCCTTAAGAATTTTTTGAAT--TTCAGCCTTAAGCTCAGCTTTCGTCG 483
consensus_9196#2 TCCAGGTTGGCATCCTTAAGAATTTTTTGAAT--TTCAGCCTTAAGCTCAGCTTTCGTCG 454
consensus_9196#0 TCCAAGTTTGCATCCTTTAGAATTTTTTGAAT--TTCAGCCTTAAGCTCAGCTTTCGTCG 1438
consensus_9196#3 GTAAAATAGAGAACTTTTTTTGTTGCTTAAATCATATAACCGTATATCC-GCTGTCGTAG 389
* * * * ** ** ** *** * * ** ** * *** **** *
consensus_9196#1 GATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCG-G 542
consensus_9196#2 GATTTTTAGTCATTTTACAATAGTAATAAGCTAACCACTCGTTTTATGGCGGTGTGCG-G 513
consensus_9196#0 GATTTTTAGTCATTTTACAATAGAAATAAGCTAAGCACTCGTTTTATGGCGGTGTGCG-G 1497
consensus_9196#3 G--TTTTGGACTGCCGGCCAGTATGTGACGATGAGAACGCACCCGATAGTAGTGTACACG 447
* **** * * * * * * * * ** * ** * **** * *
consensus_9196#1 TTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACT-- 600
consensus_9196#2 TTTTGTTTTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACT-- 571
consensus_9196#0 TTTTGTTGTGATAATAATGTATCCACAAATACCACTGAGTTTTAACTGTGGATAAACT-- 1555
consensus_9196#3 AAATGTGTAAAAAACACTACAGCTTCGTA-ACCTCGGGCCTTACTGCCCAAATGCACTAT 506
*** * ** * * * * * * *** * * ** ** ***
consensus_9196#1 -GCAGGAGCTGCAAGAGTTTGTTGAGTGA--AAAACTCTAGCGAAATAATTCACGAA-CG 656
consensus_9196#2 -GCAGGAGCTGCAAGAGTTTGTTGAGTGA--AAAACTCTAGCGAAATAATTCACGAA-CG 627
consensus_9196#0 -GCAGAAGCTGCAAGAGTTTGTTGAGTGA--AAAACTCTAGCGAAATAATTCACGAA-CG 1611
consensus_9196#3 TGCAGTAGATCGTTGAGCCCGTTTAGTTGTCGCAGTTTAGGAGCAATTAAGTATGACTCG 566
**** ** * *** *** *** * * * * *** * * ** **
consensus_9196#1 TGCTCGAAGATGCCGATCGG-ACGCG--TGGGCGG------------------------- 688
consensus_9196#2 TGCTCGAAGATGCCGATTTATGCACC--TCGATGCAAGCGAGCCCACGCGTCCGCGG--- 682
consensus_9196#0 TGCTCGAAGATGCCGATTTATGCACC--TCGATGCAAGCGAGAGGCCGATTTTTTTTTGG 1669
consensus_9196#3 TACTTGGTTAAAATAGTTAAAAAAGTGTTCGATGCCCGCGGACGCGTGGGCGG------- 619
* ** * * * * * *
consensus_9196#1 ---------------------------------------------------
consensus_9196#2 ---------------------------------------------------
consensus_9196#0 GCGAAATGTGTACCGGGGTGCCAAAGACGCTTACTTCAGCGCTGCGTGCGG 1720
consensus_9196#3 ---------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||