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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9202#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1446 fasta sequence
[TCCGCGCCCTGTCGGCGAACAAGATCGCCGAGATCGCCGTGGAAGACATGGAGCATCCGCAGCAGGCGGCCGAAGGGGCCACCCTGGGCCAACTACAAGTTCCAGGCGTTCAAGAGCAAGGAGAAACAAACGCCGCTGCCCGCGGTAAGCTTCGCGGAGGATGCCAGCGGGAAGGCCGATTGGGATCGGGGTGTGATCA-TGCCGAGGCGCAAAACTTTGCCCGCGTATTGATGGAAACACCGGCCAACCATATGACGCCCACCATTTTCGCGGATACCGTCAAGCAACGGCTCGGCGCTGCCAACGTCGAGGTCGTCGTGCACGATGAAGCTTGGGCGAAGGAGAAAAAGATGGGTTCGTTCCTCTCGGTTACGAACGGTTCGAACGAACCGGCCCGCTTCCTGGAGCTGACGTATCGTGGATCCCTGGACGAACAGTGCGTGGCGCTGGTAGGCAAGGGCATCACGTTCGATTCCGGTGGCATCAGCCTGAAGCCGTCCGCCAACATGGACCAGATGCGTGCCGACATGGGTGGTGCAGCGAACGTGGTGTCGACCATACTGGCCTTGGCACAGCTGAAGGCACCGGTGCACGTGAAAGGGTTTGTGCCGCTGTGCGAAAACATGCCAAGCGGCACGGCCACCAAACCGGGCGACGTGGTTTACGCAATGAATGGCAAGAGCATCTGCGTGGATAACACCGACGCCGAGGGGCGTCTTATATTGGCGGACGCGTTATGCTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACC-GGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCA]
[+] EMBL AGA281707 [TCCGCGCCCTGTCGGCGAACAAGATCGCCGAGATCGCCGTGGAAGACATGGAGCATCCGCAGCAGGCGGCCGAAGGGGCCACCCTGGGCCAACTACAAGTTCCAGGCGTTCAAGAGCAAGGAGAAACAAACGCCGCTGCCCGCGGTAAGCTTCGCGGAGGATGCCAGCGGGAAGGCCGATTGGGATCGGGGTGTGATCA TGCCGAGGCGCAAAACTTTGCCCGCGTATTGATGGAAACACCGGCCAACCATATGACGCCCACCATTTTCGCGGATACCGTCAAGCAACGGCTCGGCGCTGCCAACGTCGAGGTCGTCGTGCACGATGAAGCTTGGGCGAAGGAGAAAAAGATGGGTTCGTTCCTCTCGGTTACGAACGGTTCGAACGAACCGGCCCGCTTCCTGGAGCTGACGTATCGTGGATCCCTGGACGAACAGTGCGTGGCGCTGGTAGGCAAGGGCATCACGTTCGATTCCGGTGGCATCAGCCTGAAGCCGTCCGCCAACATGGACCAGATGCGTGCCGACATGGGTGGTGCAGCGAACGTGGTGTCGACCATACTGGCCTTGGCACAGCTGAAGGCACCGGTGCACGTGAAAGGGTTTGT ]
[+] EMBL BX603176 [ GGTGTGATCATTGCCGAGGCGCAAAACTTTGCCCGCGTATTGATGGAAACACCGGCCAACCATATGACGCCCACCATTTTCGCGGATACCGTCAAGCAACGGCTCGGCGCTGCCAACGTCGAGGTCGTCGTGCACGATGAAGCTTGGGCGAAGGAGAAAAAGATGGGTTCGTTCCTCTCGGTTACGAACGGTTCGAACGAACCGGCCCGCTTCCTGGAGCTGACGTATCGTGGATCCCAGGACGAACAGTGCGTGGCGCTGGTAGGCAAGGGCATCACGTTCGATTCCGGTGGCATCAGCCTGAAGCCGTCCGCCAACATGGACCAGATGCGTGCCGACATGGGTGGTGCAGCGAACGTGGTGTCGACCATACTGGCCTTGGCACAGCTGAAGGCACCGGTGCACGTGAAAGGGTTTGTGCCGCTGTGCGAAAACATGCCAA ]
[+] EMBL BM577769 [ ccgGGACCAGATGCGTGCCGACATGGGTGGTGCAGCGAACGTGGTGTCGACCATACTGGCCTTGGCACAGCTGAAGGCACCGGTGCACGTGAAAGGGTTTGTGCCGCTGTGCGAAAACATGCCAAGCGGCACGGCCACCAAACCGGGCGACGTGGTTTACGCAATGAATGGCAAGAGCATCTGCGTGGATAACACCGACGCCGAGGGGCGTCTTATATTGGCGGACGCGTTATGCTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACC GGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTG ]
[-] EMBL AGA282987 [ AGGGTTTGTGCCGCTGTGCGAAAACATGCCAAGCGGCACGGCCACCAAACCGGGCGACGTGGTTTACGCAATGAATGGCAAGAGCATCTGCGTGGATAACACCGACGCCGA GGGCGTCTTATATTGGCGGACGCGTTATGCTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACCGGGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCAKSCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCA]
[+] EMBL BX612926 [ GGCCACCAAACCGGGCGACGTGGTTTACGCAATGAATGGCAAGAGCATCTGCGTGGATAACACCGACGCCGAGGGGCGTCTTATATTGGCGGACGCGTTATGCTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACC GGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTTTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCC ]
[+] EMBL BX626637 [ TACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACC GGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCNGNTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGAT ]
consensusID : consensus_9202#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1052 fasta sequence
[TCGGTAGGTCGTGGAGTCGCAGCTACGCTTCAATGTCGAAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAAGGATGAGGTGAAGTTTACGCCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATCTGCGGTCCGGTAAAAGCTGGCCAGACGCGAATTTTCTGGGAGCTCGGTAAGTTTCCAGCGGTAGCGGTAGCCGGTTTGGGCGATGCTTCCAAATGGGACGAGCTGGACGAGATCGATGGAGCGAAGGAAAACGTGCGCA-TTGCGGCCGCGGCCGGTGTCCGCGCCCTGTCGGGCGTGTTTTCCAGCAACAATAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACA----GTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTACATGCTAACCATTTGTTTTATTTGTTAGAAATGTGGCAAAGGTTGTTGGTTAATAAATAGTCAAT]
[+] EMBL CNS09K09 [TCGGTAGGTCGTGGAGTCGCAGCTACGCTTCAATGTCGAAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAAGGATGAGGTGAAGTTTACGCCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATCTGCGGTCCGGTAAAAGCTGGCCAGACGCGAATTTTCTGGGAGCTCGGTAAGTTTCCAGCGGTAGCGGTAGCCGGTTTGGGCGATGCTTCCAAATGGGACGAGCTGGACGAGATCGATGGAGCGAAGGAAAACGTGCGCA TTGCGGCCGCGGCCGGTGTCCGCGCCCTGTCGGGCGTGTTTTCCAGCAACAATAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAA GGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTGTTTTTCTTCTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGCG ACTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTACATGCTA ]
[-] EMBL CNS09K0A [ TTGGGTGTTTACTCGTCCGAGGGCAAGGATGAGGTGAAGTTTACGCCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATCTAAAAACCGGTAAAAGCTGGCCAGACGCGAATTTTCTGGGAGCTCGGTAAGTTTCCAGCGGTAGCGGTAGCCGGTTTGGGCGATGCTTCCAAATGGGACGAGCTGGACGAGATCGATGGAGCGAAGGAAAACGTGCGCATTTGCGGCCGCGGCCGGTGTCCCCG CCTGTCGGGCGTGTTTTCCAGCAACAATAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGAACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACAGTTTGTTTGTTTGTTTGTTTTTCTTCTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTACATGCTAACCATTTGTTTTATTTGTTAGAAATGTGGCAAAGGTTGTTGGTTAATA ]
[+] EMBL BM580958 [ CCGGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACA GTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATA ]
[+] EMBL BM581938 [ ccgCGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACA GTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTACATGCTAACCATTTGTTTTATTTGTTAGAAATGTGGCAAA ]
[-] EMBL AGA283282 [ GGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACA GTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCAAGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAG ]
[-] EMBL BM581172 [ CTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAACA GTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAACCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTTGTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATCGATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTACATGCTAACCATTTGTTTTATTTGTTAGAAATGTGGCAAAGGTTGTTGGTTAATAAATAGTCAAT]
consensusID : consensus_9202#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 666 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCG-GTTATGTTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACCGGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCTACAGTTTGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACA-CCAGTGTTGTGGATAGCATTTCCGGGGGACTAC-TTCTATGATCCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCTTTACCCGCATTCGGTTTTGT]
[+] EMBL BM579468 [CCGCCCACGCGTCCGCCCACGCGTCCG GTTATGTTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACCGGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCTACAGTTTGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACA CCAGTGTTGTGGATAGCATTTCCGGGGGACTAC TTCTATGATCCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCTTTACCCGCATTCGGTTTTGT]
[+] EMBL BM613364 [ ccgtattgGCGGACGCGTTATGTTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATTGCGACCCTGACCGGTGCCATCAAGGTAGCGCTGGGCGATTGCGTGTCGGGCGTGTTTTCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGGGTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACCACAACGGTTACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTCTTGCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGATGGGCGATTGTAGCGATCAAAGCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATGCGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCTACAGTTTGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTTTACTGACTTTGTACAACACCCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTTCTATGATCCGTATGC ]
consensusID : consensus_9202#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 618 fasta sequence
[CCGCAATTCGGTACGGTCGTGGAGTCGCAGCTACGCTTCAATGTCGAAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAGGGATGAGGTGAAGTTTACGCCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATATCCACTGTTATGTTCTAAGCCCCAACCTGGTACACACTTTTGCAAACGATAGCAAAGCAAAGCGAATAAGCACAGTGCGCGAGAAAAATGCAAACATTCATATTAGAGAACTCGACTTTCTCTAAAGCACACCCATACGATATAGTGAAAGTGTATAGGAAAAGATAACAGACAGTTCAACTGTACGACGGATATACACGTCGCGCGTAACGCAGTTTGTTCATTCGAAGATGATGTTGTTGATTTGTAAAAAAAACACACACTGCACAGCTTAATCGTCTTAATAAGTTCAGTTTTTGAAATGTTTTAAAGTTTATTGGTGTGATTCGGGTTTGAGTTACGTACGATATGCTTTTACTGTGACTTCCGGCTAGAAACAATCGTTTCTGTTAAGCGCTATCTGTAGACGAGTTGTGTTTGAGTGCTCTAATCTATCCAATCGATTAACTCTA]
[+] EMBL BM632474 [CCGCAATTCGGTACGGTCGTGGAGTCGCAGCTACGCTTCAATGTCGAAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAGGGATGAGGTGAAGTTTACGCCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATATCCACTGTTATGTTCTAAGCCCCAACCTGGTACACACTTTTGCAAACGATAGCAAAGCAAAGCGAATAAGCACAGTGCGCGAGAAAAATGCAAACATTCATATTAGAGAACTCGACTTTCTCTAAAGCACACCCATACGATATAGTGAAAGTGTATAGGAAAAGATAACAGACAGTTCAACTGTACGACGGATATACACGTCGCGCGTAACGCAGTTTGTTCATTCGAAGATGATGTTGTTGATTTGTAAAAAAAACACACACTGCACAGCTTAATCGTCTTAATAAGTTCAGTTTTTGAAATGTTTTAAAGTTTATTGGTGTGATTCGGGTTTGAGTTACGTACGATATGCTTTTACTGTGACTTCCGGCTAGAAACAATCGTTTCTGTTAAGCGCTATCTGTAGACGAGTTGTGTTTGAGTGCTCTAATCTATCCAATCGATTAACTCTA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9202#0 TCCGCGCCCTGTCGGCGAACAAGATCGCCGAGATCGCCGTGGAAGACATGGAGCATCCGC 60
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 ------------------------------------------------------------
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 AGCAGGCGGCCGAAGGGGCCACCCTGGGCCAACTACAAGTTCCAGGCGTTCAAGAGCAAG 120
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 ------------------------------------------------------------
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 GAGAAACAAACGCCGCTGCCCGCGGTAAGCTTCGCGGAGGATGCCAGCGGGAAGGCCGAT 180
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 ------------------------------------------------------------
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 TGGGATCGGGGTGTGATCATGCCGAGGCGCAAAACTTTGCCCGCGTATTGATGGAAACAC 240
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 ------------------------------------------------------------
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 CGGCCAACCATATGACGCCCACCATTTTCGCGGATACCGTCAAGCAACGGCTCGGCGCTG 300
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 ------------------------------------------------------------
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 CCAACGTCGAGGTCGTCGTGCACGATGAAGCTTGGGCGAAGGAGAAAAAGATGGGTTCGT 360
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 ------------------------------------------------------------
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 TCCTCTCGGTTACGAACGGTTCGAACGAACCGGCCCGCTTCCTGGAGCTGACGTATCGTG 420
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 ------------------------------------------------------------
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 GATCCCTGGACGAACAGTGCGTGGCGCTGGTAGGCAAGGGCATCACGTTCGATTCCGGTG 480
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 ------------------------------------------------------------
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 GCATCAGCCTGAAGCCGTCCGCCAACA-TGGACCAGATGCGTGCCGACATGGGTGGTGCA 539
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 ---------------------TCGGTA-GGTCGTGGAGTCGCAGCTACGCTTCAATGTCG 38
consensus_9202#3 --------------CCGCAATTCGGTACGGTCGTGGAGTCGCAGCTACGCTTCAATGTCG 46
consensus_9202#0 GCGAACGTGGTGTCGACCATACTGGCCTTGGCACAGCTGAAGGCACCGGTGCACGTGAAA 599
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 AAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAAGGATGAGGTGAAGTTTACG 98
consensus_9202#3 AAGAAAGGTCTGGTTTTGGGTGTTTACTCGTCCGAGGGCAGGGATGAGGTGAAGTTTACG 106
consensus_9202#0 GGGTTTGTGCCGCTGTGCGAAAACATGCCAAGCGGCACGGCCACCAAACCGGGCGACGTG 659
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 CCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATC 158
consensus_9202#3 CCGTACGCTCAAAAGTACAACGAATCAACAGCTGGAAAGTTGCTGGAGCAGATTAATATA 166
consensus_9202#0 GTTTACGCAATGAATGGCAAGAGCATCTGCGTGGATAACACCGACGCCGAGGGGCGTCTT 719
consensus_9202#2 -------------------------------------------CCGCCCACG--CGTCC- 14
consensus_9202#1 TGCGGTCCGGTAAAAGCTGGCCAGACGCGAATTTTCTGGGAGCTCGGTAAGTTTCCAGCG 218
consensus_9202#3 TCCACTGTTAT------------------------------GTTC--TAAGCCCCAACC- 193
* * *
consensus_9202#0 ATATTGGCGGACGCGTTATGCTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATT 779
consensus_9202#2 GCCCACGCGTCCG-GTTATGTTACGCCTCGACCTTCAATCCAAAGTTCATCCTGGACATT 73
consensus_9202#1 GTAGCGGTAGCCGGTTTGGGCGATGCTTCCAAATGGGACGAGCTGGACGAGATCGATGGA 278
consensus_9202#3 ----TGGTACACACTTTTGCAAACGATAGCAAAGCAAAGCGAATAAGCACAGTGCGCGAG 249
* * ** * * * * * *
consensus_9202#0 GCGACCCTGACCGGTGCCATCAAGGTAGCGCTGGGCGATTGCG---TGTCGGGCGTGTTT 836
consensus_9202#2 GCGACCCTGACCGGTGCCATCAAGGTAGCGCTGGGCGATTGCG---TGTCGGGCGTGTTT 130
consensus_9202#1 GCGAAGGAAAACGTGCGCATTGCGGCCGCGGCCGGTGTCCGCGCCCTGTCGGGCGTGTTT 338
consensus_9202#3 AAAAATGCAAACATTCATATTAGAGA---ACTCGACTTTCTCTAAAGCACACCCATACGA 306
* * * ** * * * * * *
consensus_9202#0 TCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGG 896
consensus_9202#2 TCCAGCAACAACAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGG 190
consensus_9202#1 TCCAGCAACAATAAACTGTGGGAGACGATCCACGAGGCGGGCTCGCAGACCGGTGATCGG 398
consensus_9202#3 TATAGTGAAAGTGTATAGGAAAAGATAACAGAC-AGTTCAACTGTACGACGGATA--TAC 363
* ** * * * * *** * ** ** ** *** * *
consensus_9202#0 GTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACC---ACAACGGT 953
consensus_9202#2 GTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACC---ACAACGGT 247
consensus_9202#1 GTGTGGCGCATGCCACTGTTCAAGCACTACAGCGACCAGATGTGCGACC---ACAACGGT 455
consensus_9202#3 ACGTCGCGCGTAACGCAGTTTGTTCATT-CGAAGATGATGTTGTTGATTTGTAAAAAAAA 422
** **** * * * *** ** * * ** * * ** * **
consensus_9202#0 TACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTC 1013
consensus_9202#2 TACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTC 307
consensus_9202#1 TACGATCTGAACAACCTGGGCAAGGGCAAGGGCGGCGGATCCTGCACTGCCGCTGCATTC 515
consensus_9202#3 CACACACTGCACAGCTTAATCGTCT-TAATAAGTTCAGTTTTTGAAATGTTTTAAAGTTT 481
** *** *** * * * ** * * * ** * ** **
consensus_9202#0 TT--GCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGA 1071
consensus_9202#2 TT--GCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGA 365
consensus_9202#1 TT--GCGCGAGTTCGTGCCGAAGGGTACACCGTGGCTGCACGTAGATATCGCCGGCGTGA 573
consensus_9202#3 ATTGGTGTGATTCGGGTTTGAGTTACGTACGATATGCTTTTACTGTGACTTCCGGCTAGA 541
* * * ** * * ** ** * * * ***** **
consensus_9202#0 TGGGCGATTGTAGCGATCAAA-GCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATG 1130
consensus_9202#2 TGGGCGATTGTAGCGATCAAA-GCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATG 424
consensus_9202#1 TGGGCGATTGTAGCGATCAAA-GCTACACCGGGTCGAAGGGCATGTCGGGCCGCCCGATG 632
consensus_9202#3 --AACAATCGTTTCTGTTAAGCGCTATCTGTAGACGAGTTGTGT-TTGAGTGCTCTAATC 598
* ** ** * * ** **** * *** * * * * * * **
consensus_9202#0 CGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAAC 1190
consensus_9202#2 CGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCTAC 484
consensus_9202#1 CGTACGCTCGTCGAGTTCGTTACCAAGGCGGGTAGCGCTTAAAGCAGGCAATGAAGCAAC 692
consensus_9202#3 TATCCAATCGATTAACTCTA---------------------------------------- 618
* * *** * **
consensus_9202#0 AGTTTGTTTGTTTGTTT----TTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTT 1246
consensus_9202#2 AGTTTGTTTGTTTGTTTGTTTTTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTT 544
consensus_9202#1 AGTTTGTTTGTTTGTTT----TTCTTTTCTTCGTTGCATTTAGTGACGATTCTACAAGTT 748
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 TACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAA 1306
consensus_9202#2 TACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATGAT 604
consensus_9202#1 TACTGACTTTGTACAACACCAGTGTTGTGGATAGCATTTCCGGGGGACTACTTCTATAAA 808
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 CCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTT 1366
consensus_9202#2 CCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCTTTACCCGCATTCGGTTTT 664
consensus_9202#1 CCGTATGCATTTTATGGTCACGCAGTGCGCTGTGGTAGTTCCTTACCCGCACTCGGTTTT 868
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 GTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATC 1426
consensus_9202#2 GT---------------------------------------------------------- 666
consensus_9202#1 GTTTTGCCATCGAGCTAACATTAGCATCACTTCTTTTTCAGCATTAAATATTATTCAATC 928
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 GATCAAGCGAAGTATTTTCA---------------------------------------- 1446
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 GATCAAGCGAAGTATTTTCAGCAGTAGCACCCAACATACATCCGTTTGGTTTTTGTTTAC 988
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 ------------------------------------------------------------
consensus_9202#2 ------------------------------------------------------------
consensus_9202#1 ATGCTAACCATTTGTTTTATTTGTTAGAAATGTGGCAAAGGTTGTTGGTTAATAAATAGT 1048
consensus_9202#3 ------------------------------------------------------------
consensus_9202#0 ----
consensus_9202#2 ----
consensus_9202#1 CAAT 1052
consensus_9202#3 ----
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||