These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9213#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1278 fasta sequence [CCGAACGGTGTTAGATCCGTGATCATTCACTTCAACTCTGCAATCCAAGATATCATAAAACAAAGCAAAAATAGAGTAGACACGATCGCTTGTCGATCCGACTCATTCAAACCGCCATGTTGTCAACATCGTCAAACGGGAAGATCAAACGATCATCATCATCATCATCGTCATCGTCATCATTAGCGGGTTCATTGCAATGCCTGCAATTGATTGCAATCAGTGTTTTGCTGTGGTGTAGTGCGTCCAGTAGCCTCGCCCAAGCACAGAGAGTAAAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACTCTCAGAGCCTTTACTATGTGGACATCAACACACCGG-CCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCAAGCTAGCGGGTGCAAACTCCATTTCCTTCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTT-CAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTCAATGGCGCACATCC-GGGGTACGTT-CCGGACGGAATGACGAGCGATGCGGACGGTAATCTGTACGTTGCGACTTGGGGCGGTTCGAAGGTTATGAAGATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAACATCGGTAGCCTTTGGCGGTCCGCAGATGGATGAGCTGTTTGTCACGACGTCTTCCAACGGGGACAAGCCTGCACCGGCCGGCGAGCTGTTCAAAGTGACCGGTTTGGGCGTCAAGGGAAAGCCGATGCATAAGATGGTGCTGTGAAGGATGGGTGCATTAATAAATCAGTTCACAGTTTTTGATT-TTTCAAACTTCAAAATAAAAAAAAAAA] [+] EMBL BM619373 [CCGAACGGTGTTAGATCCGTGATCATTCACTTCAACTCTGCAATCCAAGATATCATAAAACAAAGCAAAAATAGAGTAGACACGATCGCTTGTCGATCCGACTCATTCAAACCGCCATGTTGTCAACATCGTCAAACGGGAAGATCAAACGATCATCATCATCATCATCGTCATCGTCATCATTAGCGGGTTCATTGCAATGCCTGCAATTGATTGCAATCAGTGTTTTGCTGTGGTGTAGTGCGTCCAGTAGCCTCGCCCAAGCACAGAGAGTAAAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACTCTCAGAGCCTTTACTATGTGGACATCAACACACCGG CCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCAAGCTAGCGGGTGCAAACTCCATTTCCTTCATTGCTCTCGTCGTGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCAGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGC ] [+] EMBL CNS09J5U [ GCTGTGGTGTAGTGCGTCCAGTAGCCTCGCCCAAGCACAGAAAGTAAAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACACCCAGAGCCTTTACTATGTGGACATCAACACACCGG CCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCTTCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTT CAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTCAATGGCGCACATCC GGGGTACGTT CCGGACGGAATGACGAGCGATGCGGACGGTAATCTGTACGTTGCGACTTGGGGCGGTTCGAAGGTTATGAAGATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAACATCGGTAGCCTTTGGCGGTCCGCAGATGGATGAGCTGTTTGTCACGACGTCTTCCAACGGGGACAAGCCTGCACCGGCCGGCGAGCTGTTCAAAGTGACCGGTTTGGGCGTCAAGGGAAAGCCGATGCATAAAAAAAAAAAGTGAAGGATGGGTGCATTAATAAATCAGTTCA ] [+] EMBL BM630932 [ ccGGTGTAGTGCGTCCAGTAGCCTCGCCCAAGCACAGAGAGTAAAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACTCCCAGAGCCTTTACTATGTGGACATCAACACACCGG CCGTGCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCAAGCTAGCGGGTGCAAACTCCATTTCCTTCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATTGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTT CAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGA ] [+] EMBL BX628283 [ GTAGCCTCGCCCAAGCACAGAGAGTAAAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACTCTCAGAGCCTTTACTATGTGGACATCAACACACCGG CCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCAAGCTAGCGGGTGCAAACTCCATTTCCTTCATTGCTCTCGTCGTGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCAGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGAGGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTT CAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTCAATGGCGCACATCC GGGATACGTT CCGGATGGTATGACGAGCGATGCNGAANGTAATCTGTACGTTGCG ] [+] EMBL BX621889 [ CCTCGCCCAAGCACAGAGAGTAAAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACTCTCAGAGCCTTTACTATGTGGACATCAACACACCGG CCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCAAGCTAGCGGGTGCAAACTCCATTTCCTTCATTGCTCTCGTCGTGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCAGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGAGGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTT CAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTCAATGGCGCACATCC GGGATACGTT CCGGATGGTATGACGAGCGATGCGGAAGGTAATCTGTACGTTGCGACTTGGGGCGGTTCGAAGGTTATGAAGATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAACATCGGTAGCCTTTGGCGGTCCGCANATGGATGAGCT ] [+] EMBL BM617113 [ ccgGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACTCCCAGAGCCTTTACTATGTGGACATCAACACACCGG CCGTGCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCAAGCTAGCGGGTGCAAACTCCATTTCCTTCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATTGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTT CAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAA ] [+] EMBL BX612617 [ ACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACTCTCAGAGCCTTTACTATGTGGACATCAACACACCGG CCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCAAGCTAGCGGGTGCAAACTCCATTTCCTTCATTGCTCTCGTCGTGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCAGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGAGGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTT CAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTCAATGGCGCACATCC GGGATACGTT CCGGATGGTATGACGAGCGATGCGGAag ] [-] EMBL CNS08EPI [ CAACACACCGG CCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCCCGCTGGCGGGTGCAAACTCCATCTCCTTCATGGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAAAAAAAAAGTAACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTAACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAAAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAATATCTCGAACGGGTTGACCTGGGACGAACCGTT CAACCC CTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTAAATGGCGCACATCC GGGGTACGTT CCGGACGGAATGACGAGCGATGCGGACGGTAATCTGTACGTTGCGACTTGGGGCGGTTCGAAGGTTATGAAGATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAACATCGGTAGCCTTTGGCGGTCCGCAGATGGTTGAGCTGTTTGTCACGACGTCTTCCAACGGGGACAAGCCTGCACCGGCCGGCGAGCTGTTCAAAGTGACCGGTTTGGGCGTCAAGGGAAAGCCGATGCATAAGATGGTGCTGTGAAGGATGGGTGCATTAATAAATCAGTTCACAGTTTTTGATTCTTTCAAACTTCAAAATAAAAAAAAAAA] [-] EMBL CNS09J5V [ ACACACCGGCCCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCTTCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTAACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAAAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCATTTTCTCGAACGGGTTGACCTGGGACGAACCGTT CAACCC CTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTTTTTTACGACCTGCGCGTAAATGGCGCACATCC GGGGTACGTT CCGGACGGAATGACGAGCGATGCGGACGGTAATCTGTACGTTGCGACTTGGGGCGGTTCGAAGGTTATGAAGATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAACATCGGTAGCCTTTGGCGGTCCGCAGATGGATGAGCTGTTTGTCACGACGTCTTCCAACGGGGACAAGCCTGCACCGGCCGGCGAGCTGTTCAAAGTGACCGGTTTGGGCGTCAAGGGAAAGCCGATGCATAAGATGGTGCTGTGAAGGATGGGTGCATTAATAAATCAGTTCACAGTTTTTGATT TTTCAAACTTCAAAA ] [-] EMBL CNS094EY [ GACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCCGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTCCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTTCCAACCCCCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTCAATGGCGCACATCCGGGGGTACGTTCCCGGACGGAATGACGAGCGATGCGGACGGTAATCTGTACGTTGCGACTTGGGGCGGTTCGAAGGTTATGAAGATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCC GCTGAGCAGGTAACATCGGTAGCCTTTGGCGGTCCGCAGATGGATGAGCTGTTTGTCACGACGTCTTCCAACGGGGACAAGCCTGCACCGGCCGGCGAGCTGTTCAAAGTGACCGGTTTGGGCGTCAAGGGAAAGCCGATGCATAAGATGGTGCTGTGAAGGATGGG GCATTAATAAATCAGTTCACAGTTTTTGTTT TTTAAAA ] consensusID : consensus_9213#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 951 fasta sequence [GAATCATATTGGAATTGATCATTTTTTCAATTCTCTTGCAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACACCCAGAGCCTTTACTATGTGGACATCAACACACCGGCCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCTTCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTCAATGGCGCACATCCGGGGTACGTTCCGGACGGAATTTTGAGCGATGCGGACGGTAATCTGTACGTTGCGACTTGGGGCGGTTCGAAGGTTATGAAGATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAACATCGGTAGCCTTTGGCGGTCCGCAGATGGATGAGCTGTTTGTCACGACGTCTTCCAACGGGGACAAGCCTGCACCGGCCGGCGAGCTGTTCAAAGTGACCGGTTTGGGCGTCAAGGGAAAGC] [+] EMBL CNS08EPH [GAATCATATTGGAATTGATCATTTTTTCAATTCTCTTGCAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACACCCAGAGCCTTTACTATGTGGACATCAACACACCGGCCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCTTCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTCAATGGCGCACATCCGGGGTACGTTCCGGACGGAATTTTGAGCGATGCGGACGGTAATCTGTACGTTGCGACTTGGGGCGGTTCGAAGGTTATGAAGATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAACATCGGTAGCCTTTGGCGGTCCGCAGATGGATGAGCTGTTTGTCACGACGTCTTCCAACGGGGACAAGCCTGCACCGGCCGGCGAGCTGTTCAAAGTGACCGGTTTGGGCGTCAAGGGAAAGC] [+] EMBL BX618943 [ TGAGAACAACCGAGTGACGCTGATCAGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGAGGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGA ] consensusID : consensus_9213#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 869 fasta sequence [GTGATTCATTTGAAACCATTCGCAACTGTGGCGAACGAAATAGTTGAAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACACCCAGAGCCTTTACTATGTGGACATCAACACACCGGCCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCTTCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTCCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTCAATGGCGCACATCCGGGGTACGTTCCGGACGGAATGACGAGCGATGCGGACGGTAATCTGTACGTTGCGACTTGGGGCGGTTCAAAGGTTATGAAGATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAACATCGGTAGCCTTTGGCGGTCCGCAGATGGATG] [+] EMBL CNS094EX [GTGATTCATTTGAAACCATTCGCAACTGTGGCGAACGAAATAGTTGAAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACACCCAGAGCCTTTACTATGTGGACATCAACACACCGGCCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCTTCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTCCGCCCAGAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGAAGAATGAGACGGTGTTTTACGACCTGCGCGTCAATGGCGCACATCCGGGGTACGTTCCGGACGGAATGACGAGCGATGCGGACGGTAATCTGTACGTTGCGACTTGGGGCGGTTCAAAGGTTATGAAGATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAACATCGGTAGCCTTTGGCGGTCCGCAGATGGATG] consensusID : consensus_9213#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 794 fasta sequence [AATCCCCGAGGTTATGAAACCATTCGCAACTGTGGCGAACGAAATAGTTGAAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACACCCAGAGCCTTTACTATGTGGACATCAACACACCGGCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCTTCATTGCTCTCGTCGCGGGACAGCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGNGCGGAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCANAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATCCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGACAGAATGAGACGGTGTTTTACGACCTGCGCGTCAACTGGCGCACATCCGGGGTACGTTCCGGACGGAATGACGAGCGATGCGCGACGGTAACTCTGTACGTTGCCGACCTTGGGCCGGCTCGAACGGTCATGACGATTGAT] [+] EMBL AL695008 [AATCCCCGAGGTTATGAAACCATTCGCAACTGTGGCGAACGAAATAGTTGAAGATGGCCAGCAGTGATAGCAGTTATCAGGTGGTGAAGCTCCCAAGTCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACACCCAGAGCCTTTACTATGTGGACATCAACACACCGGCGTCCTGCGCTACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCTTCATTGCTCTCGTCGCGGGACAGCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGACGCTGATCCGTTGGGACGGTCGCTCCGAGNGCGGAAGTCACGTCCGTGTGCTGGCCGATTTGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTTTGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCANAAGGAGGGCCAGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGAACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATCCGATTCGGCCGCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGACAGAATGAGACGGTGTTTTACGACCTGCGCGTCAACTGGCGCACATCCGGGGTACGTTCCGGACGGAATGACGAGCGATGCGCGACGGTAACTCTGTACGTTGCCGACCTTGGGCCGGCTCGAACGGTCATGACGATTGAT] consensusID : consensus_9213#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 190 fasta sequence [GCCCCGAGGNTNTGCTCGCCAGCACAGAGAGTAAGATGGCAGCAGTGATAGCAGTTATCAAGGGTGGGTGAAGCTCCCAAGGTCCACGGCCGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACTCTCAGAGCTTTACTATGTGGACATCAAAACACACCGGCCGTCCTGCGCTACGACTATGGGGAAA] [+] EMBL AL693431 [GCCCCGAGGNTNTGCTCGCCAGCACAGAGAGTAAGATGGCAGCAGTGATAGCAGTTATCAAGGGTGGGTGAAGCTCCCAAGGTCCACGGCCGAAGCTAGGCGAGGGTCCAGTGTGGGACATCGACTCTCAGAGCTTTACTATGTGGACATCAAAACACACCGGCCGTCCTGCGCTACGACTATGGGGAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9213#2 ------------------------------------------------------------ consensus_9213#3 ------------------------------------------------------------ consensus_9213#1 ------------------------------------------------------------ consensus_9213#0 CCGAACGGTGTTAGATCCGTGATCATTCACTTCAACTCTGCAATCCAAGATATCATAAAA 60 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 ------------------------------------------------------------ consensus_9213#3 ------------------------------------------------------------ consensus_9213#1 ------------------------------------------------------------ consensus_9213#0 CAAAGCAAAAATAGAGTAGACACGATCGCTTGTCGATCCGACTCATTCAAACCGCCATGT 120 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 ------------------------------------------------------------ consensus_9213#3 ------------------------------------------------------------ consensus_9213#1 ------------------------------------------------------------ consensus_9213#0 TGTCAACATCGTCAAACGGGAAGATCAAACGATCATCATCATCATCATCGTCATCGTCAT 180 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 ------------------------------------------------GTGATTCATTTG 12 consensus_9213#3 -------------------------------------------AATCCCCGAGGT-TATG 16 consensus_9213#1 --------------------------------------------------GAATCATATT 10 consensus_9213#0 CATTAGCGGGTTCATTGCAATGCCTGCAATTGATTGCAATCAGTGTTTTGCTGTGGTGTA 240 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 AAACCATTCGCAACTGTGGC-GAACGAAATAGTTGAAGATGGCCAGCAGTGATAGCAGTT 71 consensus_9213#3 AAACCATTCGCAACTGTGGC-GAACGAAATAGTTGAAGATGGCCAGCAGTGATAGCAGTT 75 consensus_9213#1 GGA--ATTGATCATTTTTTC-AATT----CTCTTGCAGATGGCCAGCAGTGATAGCAGTT 63 consensus_9213#0 GTGCGTCCAGTAGCCTCGCCCAAGCACAGAGAGTAAAGATGGCCAGCAGTGATAGCAGTT 300 consensus_9213#4 -GCCCCGAGGNTNTGCTCGCCAGCACAGAGAGT--AAGATGGC-AGCAGTGATAGCAGTT 56 * ******* **************** consensus_9213#2 ATCAGGTG---GTGAAGCTCCCAAG-TCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGG 127 consensus_9213#3 ATCAGGTG---GTGAAGCTCCCAAG-TCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGG 131 consensus_9213#1 ATCAGGTG---GTGAAGCTCCCAAG-TCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGG 119 consensus_9213#0 ATCAGGTG---GTGAAGCTCCCAAG-TCCACGGACGAAGCTAGGCGAGGGTCCAGTGTGG 356 consensus_9213#4 ATCAAGGGTGGGTGAAGCTCCCAAGGTCCACGGCCGAAGCTAGGCGAGGGTCCAGTGTGG 116 **** * * ************** ******* ************************** consensus_9213#2 GACATCGACACCCAGAGCCTTTACTATGTGGACATCAA--CACACCGGCCGTCCTGCGCT 185 consensus_9213#3 GACATCGACACCCAGAGCCTTTACTATGTGGACATCAA--CACACCGGC-GTCCTGCGCT 188 consensus_9213#1 GACATCGACACCCAGAGCCTTTACTATGTGGACATCAA--CACACCGGCCGTCCTGCGCT 177 consensus_9213#0 GACATCGACTCTCAGAGCCTTTACTATGTGGACATCAA--CACACCGGCCGTCCTGCGCT 414 consensus_9213#4 GACATCGACTCTCAGAGC-TTTACTATGTGGACATCAAAACACACCGGCCGTCCTGCGCT 175 ********* * ****** ******************* ********* ********** consensus_9213#2 ACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCT 245 consensus_9213#3 ACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCT 248 consensus_9213#1 ACGACTATGGGGAAAATCGTACCTACAGCGCCCAGCTAGCGGGTGCAAACTCCATCTCCT 237 consensus_9213#0 ACGACTATGGGGAAAATCGTACCTACAGCGCCAAGCTAGCGGGTGCAAACTCCATTTCCT 474 consensus_9213#4 ACGACTATGGGGAAA--------------------------------------------- 190 *************** consensus_9213#2 TCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGA 305 consensus_9213#3 TCATTGCTCTCGTCGCGGGACAGC-GGAACATTTCGTGGTTGGTGAGAACAACCGAGTGA 307 consensus_9213#1 TCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGA 297 consensus_9213#0 TCATTGCTCTCGTCGCGGGACAGCCGGAACATTTCGTGGTTGGTGAGAACAACCGAGTGA 534 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 CGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATT 365 consensus_9213#3 CGCTGATCCGTTGGGACGGTCGCTCCGAGNGCGGAAGTCACGTCCGTGTGCTGGCCGATT 367 consensus_9213#1 CGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATT 357 consensus_9213#0 CGCTGATCCGTTGGGACGGTCGCTCCGAGGCGGCAAGTCACGTCCGTGTGCTGGCCGATT 594 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 TGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTT 425 consensus_9213#3 TGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTT 427 consensus_9213#1 TGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTT 417 consensus_9213#0 TGGGCCCCAGCCAGAGCCACGTTCGGTTCAACGATGGCAAGATCGATCCGGCCGGCCGTT 654 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 TGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTCCGCCCAGAAGGAGGGCC 485 consensus_9213#3 TGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCANAAGGAGGGCC 487 consensus_9213#1 TGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCC 477 consensus_9213#0 TGTACGCGGGCACGATGCAGCTAGAATCGCTGGGCGATCTGTTCGCCCAGAAGGAGGGCC 714 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 AGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGA 545 consensus_9213#3 AGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGA 547 consensus_9213#1 AGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGA 537 consensus_9213#0 AGCTGTTCCGGTACACCAACGGGACGATGGTGGTGCAGAAGCAGAACGTCAGTATCTCGA 774 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 ACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATC-GATTCGGCC 604 consensus_9213#3 ACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATCCGATTCGGCC 607 consensus_9213#1 ACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATC-GATTCGGCC 596 consensus_9213#0 ACGGGTTGACCTGGGACGAACCGTTCAACCCGCTGCGCATGTACTACATC-GATTCGGCC 833 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 GCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGA-AGAATGAGACGGT 663 consensus_9213#3 GCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGACAGAATGAGACGGT 667 consensus_9213#1 GCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGA-AGAATGAGACGGT 655 consensus_9213#0 GCGCTGGATGTGAAAGCGTTCGATGTGGATGCGAACGGTGATCTGA-AGAATGAGACGGT 892 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 GTTTTACGACCTGCGCGTCAA-TGGCGCACATCCGGGGTACGTTCCGGACGGAATGACGA 722 consensus_9213#3 GTTTTACGACCTGCGCGTCAACTGGCGCACATCCGGGGTACGTTCCGGACGGAATGACGA 727 consensus_9213#1 GTTTTACGACCTGCGCGTCAA-TGGCGCACATCCGGGGTACGTTCCGGACGGAATTTTGA 714 consensus_9213#0 GTTTTACGACCTGCGCGTCAA-TGGCGCACATCCGGGGTACGTTCCGGACGGAATGACGA 951 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 GCGATGCG-GACGGTAA-TCTGTACGTTGCGA--CTTGGGGCGGTTCAAA-GGTTATGAA 777 consensus_9213#3 GCGATGCGCGACGGTAACTCTGTACGTTGCCGACCTTGGGCCGGCTCGAACGGTCATGAC 787 consensus_9213#1 GCGATGCG-GACGGTAA-TCTGTACGTTGCGA--CTTGGGGCGGTTCGAA-GGTTATGAA 769 consensus_9213#0 GCGATGCG-GACGGTAA-TCTGTACGTTGCGA--CTTGGGGCGGTTCGAA-GGTTATGAA 1006 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 GATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAAC 837 consensus_9213#3 GATTGAT----------------------------------------------------- 794 consensus_9213#1 GATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAAC 829 consensus_9213#0 GATTGATAAGGGATCGCAGAAACTGGTGCTGGAAATTAAGATTCCTGCTGAGCAGGTAAC 1066 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 ATCGGTAGCCTTTGGCGGTCCGCAGATGGATG---------------------------- 869 consensus_9213#3 ------------------------------------------------------------ consensus_9213#1 ATCGGTAGCCTTTGGCGGTCCGCAGATGGATGAGCTGTTTGTCACGACGTCTTCCAACGG 889 consensus_9213#0 ATCGGTAGCCTTTGGCGGTCCGCAGATGGATGAGCTGTTTGTCACGACGTCTTCCAACGG 1126 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 ------------------------------------------------------------ consensus_9213#3 ------------------------------------------------------------ consensus_9213#1 GGACAAGCCTGCACCGGCCGGCGAGCTGTTCAAAGTGACCGGTTTGGGCGTCAAGGGAAA 949 consensus_9213#0 GGACAAGCCTGCACCGGCCGGCGAGCTGTTCAAAGTGACCGGTTTGGGCGTCAAGGGAAA 1186 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 ------------------------------------------------------------ consensus_9213#3 ------------------------------------------------------------ consensus_9213#1 GC---------------------------------------------------------- 951 consensus_9213#0 GCCGATGCATAAGATGGTGCTGTGAAGGATGGGTGCATTAATAAATCAGTTCACAGTTTT 1246 consensus_9213#4 ------------------------------------------------------------ consensus_9213#2 -------------------------------- consensus_9213#3 -------------------------------- consensus_9213#1 -------------------------------- consensus_9213#0 TGATTTTTCAAACTTCAAAATAAAAAAAAAAA 1278 consensus_9213#4 -------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||