|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9216#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1334 fasta sequence
[CCGAACATATCTCATCAAAGCAGAAAACGGAGAACAAAAAACGGAAAAACATCAGGATTGTGCAAGGAAATCCCCCTCTTGCGAGTGCTTTTTGTCAATATCTGTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG-GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT-GGGCGGTAGAGGCATCAAGGTGTTTCTCTTCACC-GGATTC-GTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC-GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCCCGACAGAGAGCGATTATTTGGGCAACTTCTAAGTGGGTCAGCCTGATGAACTGACCACCCATCGTGTCGGATACATCCATGAATCATCCGAAACCATCAACGACGCTGGGTAAACCGTACTTTAAATAGGTGTCCTTACACCATCCACGCTTCAAATTCCTACCCCCCCATTAGTCGCGGTGATTTTTTTTTAATTGTGATTCCCGTACAGCGCG-CTTGCTGGGCTGGGATAGTTCCACCCTCGGTGAGGCAGTTGGGTCGCTTCTCTCATACAGAAAAACATAAACTCATGCGACGTCGGAAGAGGAAGTAACGTTTTGATTATTTGAAGAAAAAAAAATCCATTTTCTTGATAAGTAAGTCCTAACACCCTCGAATGTCTTATCGGCCGGCAAGGAGAGTGATCGTACAAACACGAGTGTGCTGCTGCTGCTGCTGCTGCTACCGTCGATTTGAACGATCATCCATTCCTTCTTGCCTTTCGAAAAAATGACTGGAGCTGCTGTCCTAGAGAATCCAAAATTTGAAGAAACGACATGAAAAAAAAAGAACTTGCGCAGCTTCTGTATGTAAAAAGGCAAAATATCGCTCCCCCTTATAAACCATGAACTAACCTACCACGAACAAGTAAGTGTAAACACAAT]
[+] EMBL BM629562 [CCGAACATATCTCATCAAAGCAGAAAACGGAGAACAAAAAACGGAAAAACATCACGATTGTGCAAGGAAATCCCTCTCTAGCGAGTGCTTTTTGTCGATATCTGTGTCTTGTGTTCCGTCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTCTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGCGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCT ]
[+] EMBL BM580717 [ ccgAGCAGAAAACGGAGAACAAAAAACGGAAAAACATCAGGATTGTGCAAGGAAATCCCCCACTTGCGAGTGCTTTTTGTCAATACCTGTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCATGGGGCGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCCGGGGGTACGC ]
[+] EMBL CNS09LHY [ ACGGAGAACAAAAAACGGAAAAACATCAGGATTGTGCAAGGAAATCCCCCACTTGCGAGTGCTTTTTGTCAATACCTGTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACGCGCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGCGGTAGAGGCATCAAGGTGTTTCCCTTCACC GGATTC GTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCCCGACAGAGAGCGATTATTTGGGCAACTTCTAAGTGGGTCAGCCTGATGAACTGACCGCCCATCGTGTCGGATACATCCATGAATCATCCGAAACCATCAACGACGCTGGGTGAACCGTACTTTAAATAGGTGTCCTTACACCATCCACGCTTCAAATTCCTACCCCCCCATTAGTCGCGGTGATTTTTTTTTAATTGTGATTCCCGTACAGCGCG CTTGCTGGGCTGGGATAGTTCCACCC ]
[+] EMBL BM587207 [ ccgCAGGATTGTGCAAGGAAATCCCCCACTTGCGAGTGCTTTTTGTCAATACCTGTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGCGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCCCGACAGAGAGCGATTATTTGGGCAACTTCTAAGTGGGTCAGCCTGATGAACTG ]
[+] EMBL BX606906 [ TGCAAGGAAATCCCCCTCTTGCGAGTGCTTTTTGTCAATATCTGTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGTGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATTATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAA ]
[+] EMBL BM605040 [ ccGCAAGGAAATCCGTCTCTTGCGAGTGCTTTTTGTCAATATCTGTGTCTTGTGTTCCGTCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTCTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCT ]
[+] EMBL BX616114 [ GTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGTGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATTATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCCCGACGGAGAGCGATTATTTGGGCAACTTCTAAGTGGGTCAGCCTGATGAACTGACCACCCATCGTGTCGGATACATCCATGAATCATCCGAAACCATCAACGACGCTGGGTAAACCGTACTTTAAATAGGTGTCCTTACACCATCCACGCTTC ]
[+] EMBL BM618151 [ ACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAGCAAACACGCATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGGTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTCTACCCGAAATCGATCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAGCGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGCGGTAGAGGCATCAAGGTGTTTCTCTTCACCGGGAGTCGGGGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCAT ]
[+] EMBL BX615770 [ CGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGTGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATTATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCCCGACGGAGAGCGATTATTTGGGCAACTTCTAAGTGGGTCAGCCTGATGAACTGACCACCCATCGTGTCGGATACATCCATGAATCATCCGAAACCATCAACGACGCTGGGTAAACCGTACTTTAAATAGGTGTCCTTACACCATCCACGCTTCAAATTCCTACCCCCCCATTAGTCGCGGTG ]
[+] EMBL BX618169 [ CCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGTGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATTATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCC ]
[-] EMBL CNS09LHZ [ TCCACGCTTCAAATTCCTACCCCCCCATTAGTCGCGGTGATTTTTTTTTAATTGTGATTCCCGTACAGCGCGACTTGCTGGGCTGGGATAGTTCCACCCTCGGTGAGGCAGTTGGGTCGCTTCTCTCATACAGAAAAACATAAACTCATGCGACGTCGGAAGAGGAAGTAACGTTTTGATTATTTGAAGAAAAAAAAATCCATTTTCTTGATAAGTAAGTCCTAACACCCTCGAATGTCTTATCGGCCGGCAAGGAGAGTGATCGTACAAACACGAGTGTGCTGCTGCTGCTGCTGCTGCTACCGTCGATTTGAACGATCATCCATTCCTTCTTGCCTTTCGAAAAAATGACTGGAGCTGCTGTCCTAGAGAATCCAAAATTTGAAGAAACGACATGAAAAAAAAAGAACTTGCGCAGCTTCTGTATGTAAAAAGGCAAAATATCGCTCCCCCTTATAAACCATGAACTAACCTACCACGAACAAGTAAGTGTAAACACAAT]
consensusID : consensus_9216#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1178 fasta sequence
[GGTTAAATGGAGAACAAAAAACGGACCAACATCACGATTGTTCAATGGAAATCCCTCTCTACGAGTGCTTTTTGTCGATATCTGTGTCTTGTGTTCCGTCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACTGGCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCAAAGAAACAAACAAACAATCACAATGGGATAATCGAAAGCATACCCAGGGTNGTGGTCAATGGTTCCCCGAAAACGATCCTTGCGACGGTGGTAGCAGCACGTGTGTACTTTCCTNCCGGATGGTGGATCCATCCATCGANACGGGATACCGGTCTACCCCGAAAATCGGTCAANTTATACCCTAACATACATACTTGGCGGTATCCTAAGGGACGATCCAGCTTNCACTCATNGNNTGACTGCTTGTCAACAAACGCAANATTGTNCAGCNGCGCTCCCCAANTAACAACGGGGAGNGTNATCACATTTNGACGCGGCAGAGGNATACNAGGTGTATCTCTATCACCGGNAATNTACGNATGGTCGGGAGGNATACCANCCTCGAATCAGTNATGCCACCCAANCATGGGAANAACTGNCNTGGGCGAAGTAACNNGAGGAAACGAAGNTGAGAGACCNGNACAAGNACACCCGGGGGATAAGGACATGNGCAATGGAGAACAGGGTGTACCCACAATCCATAAAGACAGCCATNAAGNAACAAANNNANTGTGGCCCCAGACGGNNTAAGTAAGAAGTGATACNNAAGANAAGNAGCAGNAAANANTAGNCGCGCACGGGCTGNTGTAGGATCAAGTGCCACGAAAGAAATAAAGCNANGGGCNNACGAGAAGNNAANAGAAGGGGTAGNANAACACGCAGAACAGTGNNAACAAANACNNACACNGAANACACGGAGGAGCCNANCCGAAGAGGGGAAAAGANCNNGAAATGCAAAAGAANGGACNANAANAAAANGCANCANNAAGCAGGNCACAAGNCACGCACGGANAGCAAAGCCANCCGAGCGACGAGNANATGCNACAAGNNNNAGAGNAAGGCACGGANGGNNCNAGNNCCGGGAGCNGNGAAACGGGCGNGCGAGNAGAGGGNGAGAGGACNGCTGGCGGGGNNTGGGGNGGGGTGNNGNCNAGGCGCGGGCNGA]
[+] EMBL AL696467 [GGTTAAATGGAGAACAAAAAACGGACCAACATCACGATTGTTCAATGGAAATCCCTCTCTACGAGTGCTTTTTGTCGATATCTGTGTCTTGTGTTCCGTCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACTGGCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCAAAGAAACAAACAAACAATCACAATGGGATAATCGAAAGCATACCCAGGGTNGTGGTCAATGGTTCCCCGAAAACGATCCTTGCGACGGTGGTAGCAGCACGTGTGTACTTTCCTNCCGGATGGTGGATCCATCCATCGANACGGGATACCGGTCTACCCCGAAAATCGGTCAANTTATACCCTAACATACATACTTGGCGGTATCCTAAGGGACGATCCAGCTTNCACTCATNGNNTGACTGCTTGTCAACAAACGCAANATTGTNCAGCNGCGCTCCCCAANTAACAACGGGGAGNGTNATCACATTTNGACGCGGCAGAGGNATACNAGGTGTATCTCTATCACCGGNAATNTACGNATGGTCGGGAGGNATACCANCCTCGAATCAGTNATGCCACCCAANCATGGGAANAACTGNCNTGGGCGAAGTAACNNGAGGAAACGAAGNTGAGAGACCNGNACAAGNACACCCGGGGGATAAGGACATGNGCAATGGAGAACAGGGTGTACCCACAATCCATAAAGACAGCCATNAAGNAACAAANNNANTGTGGCCCCAGACGGNNTAAGTAAGAAGTGATACNNAAGANAAGNAGCAGNAAANANTAGNCGCGCACGGGCTGNTGTAGGATCAAGTGCCACGAAAGAAATAAAGCNANGGGCNNACGAGAAGNNAANAGAAGGGGTAGNANAACACGCAGAACAGTGNNAACAAANACNNACACNGAANACACGGAGGAGCCNANCCGAAGAGGGGAAAAGANCNNGAAATGCAAAAGAANGGACNANAANAAAANGCANCANNAAGCAGGNCACAAGNCACGCACGGANAGCAAAGCCANCCGAGCGACGAGNANATGCNACAAGNNNNAGAGNAAGGCACGGANGGNNCNAGNNCCGGGAGCNGNGAAACGGGCGNGCGAGNAGAGGGNGAGAGGACNGCTGGCGGGGNNTGGGGNGGGGTGNNGNCNAGGCGCGGGCNGA]
consensusID : consensus_9216#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 741 fasta sequence
[GCAGATCCCCCGAGGTTATTGACGCAACCAAAGGAAAGTGAAACGGTCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCTACAATGGCGATAATCGAAAGCATTCGCCAGCGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGGCGACGGTGGTAGCAGCACTGCTGTTCTTCTACCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCGAAATCGTTCAACTTTTCCTACTACATCTTGCGGTATCCTAGGGACGATCAGCGTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCATGGGCTGGTAGAGGCATCAAGGTGTTTCTCTTCACCGGATTCGTGCTCGGCTTCACCTCGATTATCGGCACATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCCGGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCAACCTGATCTACAAGTTNGGTACCCCCGACGGAGAGCGACNTCATCTGGGCAACTTCTAAGTGGGTCAGCCTGATGCAACTGACCAACCATCCGTGTCGGATTACATCCATGAATCATCCGACACCATCAACGACGCTGGTAAACCGTACTTTAAATAGGTGTCCTTACACCATCCACAGCTTCAAA]
[+] EMBL AL692783 [GCAGATCCCCCGAGGTTATTGACGCAACCAAAGGAAAGTGAAACGGTCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCTACAATGGCGATAATCGAAAGCATTCGCCAGCGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGGCGACGGTGGTAGCAGCACTGCTGTTCTTCTACCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCGAAATCGTTCAACTTTTCCTACTACATCTTGCGGTATCCTAGGGACGATCAGCGTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCATGGGCTGGTAGAGGCATCAAGGTGTTTCTCTTCACCGGATTCGTGCTCGGCTTCACCTCGATTATCGGCACATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCCGGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCAACCTGATCTACAAGTTNGGTACCCCCGACGGAGAGCGACNTCATCTGGGCAACTTCTAAGTGGGTCAGCCTGATGCAACTGACCAACCATCCGTGTCGGATTACATCCATGAATCATCCGACACCATCAACGACGCTGGTAAACCGTACTTTAAATAGGTGTCCTTACACCATCCACAGCTTCAAA]
consensusID : consensus_9216#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 702 fasta sequence
[GCAAGAATCCCCCGAGGTTTNANATGGTNAACAGAAAACGGCATGACATCACGATTGTGCAAGGAAATCCCTCTCTAGACGAGTGCTTTTTGTCGATATCTGTGTCTTGTAGTATCCTGTCCAAGTTACATGAATAGTATGACGGCAACAAAGTGAAAGTGAAGACTGGACACTTGTACTGATTTGCCATATTCTATGAGCTGCGAACCAACACTAACCANCACAACGAAACAAACAAACACACATCACAATGGCGATAATCTGAAAGCATTCTGCCAGGCGTACTTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCTGACNGTGTGGTAGCAGCACTGCTGTTCTTCTCCTGGNATGTGTGGATCATCATCGACACGGCGATCTGGTCTACCCTGAAATCGTTCAACTTTCTACCTACTACATCTGGCGTATCCTAAAGGACTGATCAGCTANACCATNCATGGTTGAATGCTTGTAAACGAACGAAATGNTNATACAACTGGGCAGNCTACACCCCAAANATAACCACTGCGTGCCTGTGTTAATACCATAGGTCACTGCGCTCAGCAGTGCCATACAANTGNTTGTATACNCTCCTATACTAAACTGGGATAACCGATAGCNACTGAGCTATCCACCCTCCNGAATCCTATACGGCCCACACAATACATTGGGATTCATTGATCTGCCCGAAGAN]
[+] EMBL AL931659 [GCAAGAATCCCCCGAGGTTTNANATGGTNAACAGAAAACGGCATGACATCACGATTGTGCAAGGAAATCCCTCTCTAGACGAGTGCTTTTTGTCGATATCTGTGTCTTGTAGTATCCTGTCCAAGTTACATGAATAGTATGACGGCAACAAAGTGAAAGTGAAGACTGGACACTTGTACTGATTTGCCATATTCTATGAGCTGCGAACCAACACTAACCANCACAACGAAACAAACAAACACACATCACAATGGCGATAATCTGAAAGCATTCTGCCAGGCGTACTTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCTGACNGTGTGGTAGCAGCACTGCTGTTCTTCTCCTGGNATGTGTGGATCATCATCGACACGGCGATCTGGTCTACCCTGAAATCGTTCAACTTTCTACCTACTACATCTGGCGTATCCTAAAGGACTGATCAGCTANACCATNCATGGTTGAATGCTTGTAAACGAACGAAATGNTNATACAACTGGGCAGNCTACACCCCAAANATAACCACTGCGTGCCTGTGTTAATACCATAGGTCACTGCGCTCAGCAGTGCCATACAANTGNTTGTATACNCTCCTATACTAAACTGGGATAACCGATAGCNACTGAGCTATCCACCCTCCNGAATCCTATACGGCCCACACAATACATTGGGATTCATTGATCTGCCCGAAGAN]
consensusID : consensus_9216#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 498 fasta sequence
[NGCCGAGGTTTANTGGTGACGAAAACGGCATGACATCACGATTGTGCAAGGAANATCCCTCTCTAGCGAGTGCTTGAGTCGATATCTGGGTCTTGTGTTCCGTCCAGAGTTACAGAATAGTTGAGGCAANCAAAGGAAAGTGAAACGGCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAAGAAACAAACAAACACACATCACAANTGGCGATAATCGAAGAGCACTTCGCAGGACGTACTGGTTCGAGAGTGTTTCCCCGAAGAACAGATCCTATGCGACAGGTGGTACGCAGCACTGCTGTAACTTCTCCGGATGGTGGATCATCATACGACTACGGCATCGGTCTACCCGAGAATCGTTACAACTTTACCTAGCTACATCTGCGGCATCCTACGGACGATCAGCTTCACTACATGGTGAATGCTGTANCGAACGAAATGCTTCACGGACGCTCCCAATTACACGGGCTGGTATCAC]
[+] EMBL AL931869 [NGCCGAGGTTTANTGGTGACGAAAACGGCATGACATCACGATTGTGCAAGGAANATCCCTCTCTAGCGAGTGCTTGAGTCGATATCTGGGTCTTGTGTTCCGTCCAGAGTTACAGAATAGTTGAGGCAANCAAAGGAAAGTGAAACGGCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAAGAAACAAACAAACACACATCACAANTGGCGATAATCGAAGAGCACTTCGCAGGACGTACTGGTTCGAGAGTGTTTCCCCGAAGAACAGATCCTATGCGACAGGTGGTACGCAGCACTGCTGTAACTTCTCCGGATGGTGGATCATCATACGACTACGGCATCGGTCTACCCGAGAATCGTTACAACTTTACCTAGCTACATCTGCGGCATCCTACGGACGATCAGCTTCACTACATGGTGAATGCTGTANCGAACGAAATGCTTCACGGACGCTCCCAATTACACGGGCTGGTATCAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9216#1 --------------------GGTTAAATGGAGAACAAAAAACGGACCAACATCACGATTG 40
consensus_9216#3 ---GCAAGAATCCCCCGAGGTTTNANATGGTNAACAGAAAACGGCATGACATCACGATTG 57
consensus_9216#4 --------------NGCCGAGGTTTANTGGTGAC--GAAAACGGCATGACATCACGATTG 44
consensus_9216#0 CCGAACATATCTCATCAAAGCAGAAAACGGAGAACAAAAAACGGAAAAACATCAGGATTG 60
consensus_9216#2 ------------------------------------------------------------
consensus_9216#1 TTCAATGGAAATCCCTCTCTA--CGAGTGCTTTTTGTCGATATCTGTGTCTTGTG---TT 95
consensus_9216#3 TGCAA-GGAAATCCCTCTCTAGACGAGTGCTTTTTGTCGATATCTGTGTCTTGTAGTATC 116
consensus_9216#4 TGCAAGGAANATCCCTCTCTAG-CGAGTGCTTGA-GTCGATATCTGGGTCTTGTG---TT 99
consensus_9216#0 TGCAAGGAAATCCCCCTCTTG--CGAGTGCTTTTTGTCAATATCTGTGTCTTGTG---TT 115
consensus_9216#2 ------------------------------------------------------------
consensus_9216#1 CCGTCAA-AGTTACA-GAATAGT-TGACG-CAACCAAAGGAAAGTGAAACTGGCACACG- 150
consensus_9216#3 CTGTCCA-AGTTACATGAATAGTATGACGGCAACAAAGTGAAAGTGAAGACTGGACACTT 175
consensus_9216#4 CCGTCCAGAGTTACA-GAATAGT-TGAGG-CAANCAAAGGAAAGTGAAA-CGGCACACG- 154
consensus_9216#0 CCGCCAA-AGTTACA-GAATAGT-TGACG-CAACCAAAGGAAAGTGAAACGG-CACACG- 169
consensus_9216#2 --GCAGA-TCCCCCG-AGGTTAT-TGACG-CAACCAAAGGAAAGTGAAACGGTCACACG- 53
* * * * * *** * *** ** ********* ****
consensus_9216#1 GTACGA--TTGCCAT-TTCT-TGAGC-GCGAACCAACACTACCCACCAAA--GAAACAAA 203
consensus_9216#3 GTACTGATTTGCCATATTCTATGAGCTGCGAACCAACACTAACCANCACAACGAAACAAA 235
consensus_9216#4 GTACGA--TTGCCAT-TTCT-TGAGC-GCGAACCAACACTACCCACCACAA-GAAACAAA 208
consensus_9216#0 GTACGA--TTGCCAT-TTCT-TGAGC-GCGAACCAACACTACCCACCACAACGAAACAAA 224
consensus_9216#2 GTACGA--TTGCCAT-TTCT-TGAGC-GCGAACCAACACTACCCACCACAACGAAACAAA 108
**** ******* **** ***** ************** *** ** * ********
consensus_9216#1 CAAACA---ATC-ACAAT-GG-GATAATC-GAAAGCATAC--CCAGGGTNG--TGGTC-- 250
consensus_9216#3 CAAACACACATC-ACAAT-GGCGATAATCTGAAAGCATTCTGCCAGGCGTACTTGGTTCG 293
consensus_9216#4 CAAACACACATC-ACAANTGGCGATAATCGAAGAGCACTTCGCAGGACGTACTGGTTCGA 267
consensus_9216#0 CAAACACACATC-ACAAT-GGCGATAATC-GAAAGCATTC-GCCAG-GCGTACTGGTTCG 279
consensus_9216#2 CAAACACACATCTACAAT-GGCGATAATC-GAAAGCATTC-GCCAGCGCGTACTGGTTCG 165
****** *** **** ** ******* * **** * * * *
consensus_9216#1 -AATGGTTCCCCGAA-AAC-GATCCTTGC-GACGGTG--GTA-GCAGCACGTGTGTACTT 303
consensus_9216#3 AAGTGCTTCCCCGAAGAAC-GATCCTTGCTGACNGTGTGGTA-GCAGCACTGCTGTTCTT 351
consensus_9216#4 GAGTGTTTCCCCGAAGAACAGATCCTATGCGACAG-GTGGTACGCAGCACTGCTGTAACT 326
consensus_9216#0 AAGTGCTTCCCCGAAGAAC-GATCCTTG-CGACGGTG--GTA-GCAGCACTGCTGTTCTT 334
consensus_9216#2 AAGTGCTTCCCCGAAGAAC-GATCCTTGGCGACGGTG--GTA-GCAGCACTGCTGTTCTT 221
* ** ********* *** ****** *** * * *** ******* *** *
consensus_9216#1 TCCTNCCGGATGGTGGATCCATCCATCGANACGGGATACCGGTCTACCCCGAAAATCGGT 363
consensus_9216#3 CTCCTGGNATGTGTGGATCA--TCATCGACACGGCGATCTGGTCTACCCTGAAA-TCGTT 408
consensus_9216#4 TC--TCCGGATGGTGGATCATCATACGACTACGGCAT--CGGTCTACCC-GAGAATCGTT 381
consensus_9216#0 CT---CCGGATGGTGGATCA--TCATCGACACGGCAT--CGGTGTACCC--GAAATCGTT 385
consensus_9216#2 CT--ACCGGATGGTGGATCA--TCATCGACACGGCAT--CGGTGTACC---GAAATCGTT 272
******* * **** *** **** * *** *
consensus_9216#1 -CAANTTATACCCTAACATACATACTTGGCGGTATCCTAAGGGACGATCCAGCT-TNCAC 421
consensus_9216#3 -CAACTT----TCTACCTACTACATCTGGCG-TATCCTAAAGGACTGATCAGCTANACCA 462
consensus_9216#4 ACAACTTT--ACCTAGC---TACATCTG-CGGCATCCTAC-GGACGA-TCAGCT--TCAC 431
consensus_9216#0 -CAACTT------TTCCTACTACATCT-GCGGTATCCTAG-GGACGA-TCAGC---TTCA 432
consensus_9216#2 -CAACTT------TTCCTACTACATCTTGCGGTATCCTAG-GGACGA-TCAGCG--TTCA 321
*** ** * * * * * ** ****** **** ****
consensus_9216#1 TCATNGNNTGACTGCTTGTCAACAAACGCAANATTG-TNCAGCNGCGCTCCCCAANTAAC 480
consensus_9216#3 TNCATGGTTGAATGCTTGTAAACGAACGAAATGNTNATACAACTGGGCAGNCTACACCCC 522
consensus_9216#4 TACATGGT-GAATGCT-GT-ANCGAACGAAATGCTT---CACGGACGCTCCCAATTACAC 485
consensus_9216#0 TCA-TGGT-GAATGCT-GT-AACGAACGAAATGCTT----CACGGCGCTCCCAATTACAC 484
consensus_9216#2 TCA-TGGT-GAATGCT-GT-AACGAACGAAATGCTT----CACGGCGCTCCCAATTACAC 373
* * ** **** ** * * **** ** * ** * * *
consensus_9216#1 AACGGGGAGNGTNATCACATTTNGACGCGGCAGAGGNATACNAGGTGTATCTCTATCACC 540
consensus_9216#3 A------AANATAACCAC--TGCGTGCCTGTGTTAATACCATAGGT-CACTGCGCTCAGC 573
consensus_9216#4 G-----GGCTGGTATCAC------------------------------------------ 498
consensus_9216#0 G------GGCGGTATCA-----TGGGC-GGTAGAGGCAT-CAAGGTGTTTCTCT-TCACC 530
consensus_9216#2 G------GGCGGTATCA-----TGGGCTGGTAGAGGCAT-CAAGGTGTTTCTCT-TCACC 420
* **
consensus_9216#1 GGNAATNTACGNATGGTCGGGAGGNATACCANCCTCGAATCAGTNATGCCACCCAANCAT 600
consensus_9216#3 AGTGCCATACAANTGNTTG-----TATACNCTCCTATACTAAACTGGGATAACCGAT--- 625
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 GGATTCGTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGT-T 589
consensus_9216#2 GGATTCGTGCTCGGCTTCACCTCGATTATCGGCAC-ATCTGGATTATGATTGCCGAGT-T 478
consensus_9216#1 GGGAANAACTGNCNTGGGCGAAGTAACNNGAGGAAACGAAGNTGAGAGACCNGNACAAGN 660
consensus_9216#3 ---AGCNACTGAGCTATCC-----ACCCTCCNGAATC----CTATACGGCCCACACAA-T 672
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 TACCGTGAACGAGTCGCGA-----ACCGACAAGTACCC--GGGGTACGCTCTGCTCATGC 642
consensus_9216#2 TACCGTGAACGAGTCGCGA-----ACCGACAAGTACCC--GGGGTACGCTCTGCTCATGC 531
consensus_9216#1 ACACCCGGGGGATAAGGACATGNGCAATGGAGAACAGGGTGTACCCACAATCCATAAAGA 720
consensus_9216#3 ACATT-GGGATTCATTGATCTGCCCGAAGAN----------------------------- 702
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 ACAAC--GTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGT-CCCCCGACAGAGA 699
consensus_9216#2 ACAAC--GTGTTCATCTTCCTAGCCAACCTGATCTACAAGTTNGGTACCCCCGACGGAGA 589
consensus_9216#1 CAGCCAT-NAAGNAACAAANNNANTGTGGCCCCAGACGGNNTAAGTAAGAAGTGATACNN 779
consensus_9216#3 ------------------------------------------------------------
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 GCGATT--ATTTGGGCAACTTCTAAGTGGGTCAGCCTGATG-AACTGACCACCCATC-GT 755
consensus_9216#2 GCGACNTCATCTGGGCAACTTCTAAGTGGGTCAGCCTGATGCAACTGACCAACCATCCGT 649
consensus_9216#1 AAGANAAGNAGCAGNAAANANTAGNCGCGCACGGGCTGNTGTAGGATCAAGTGCCACGAA 839
consensus_9216#3 ------------------------------------------------------------
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 GTCGGAT-ACATCCATGAATCATCCGAAACCATCAACGACGCTGGGTAAACCGT-ACTTT 813
consensus_9216#2 GTCGGATTACATCCATGAATCATCCGACACCATCAACGACGCTGG-TAAACCGT-ACTTT 707
consensus_9216#1 AGAAATAAAGCNANGGGCNNACGAGAAGNNAANAGAAGGGGTAGNANAACACGCAGAACA 899
consensus_9216#3 ------------------------------------------------------------
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 AAATAGGTGTCCTTACACCATCCAC-GCTTCAAATTCCTACCCCCCCATTAGTCGCGGTG 872
consensus_9216#2 AAATAGGTGTCCTTACACCATCCACAGCTTCAAA-------------------------- 741
consensus_9216#1 GTGNNAACAAANACNNACACNGAANACACGGAGGAGCCNANCCGAAGAGGGGAAAAGANC 959
consensus_9216#3 ------------------------------------------------------------
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 ATTTTTTTTTAATTGTGATTCCCGTACAGCGCGCTTGCTGGGCTGGGATAGTTCCACCCT 932
consensus_9216#2 ------------------------------------------------------------
consensus_9216#1 NNGAAATGCAAAAGAANGGACNANAANAAAANGCANCANNAAGCAGGNCACAAGNCACGC 1019
consensus_9216#3 ------------------------------------------------------------
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 CGGTGAGGCAGTTGGGTCGCTTCTCTCATACAGAAAAACATAAACTCATGCGACGTCGGA 992
consensus_9216#2 ------------------------------------------------------------
consensus_9216#1 ACGGANAGCAAAGCCANCCGAGCGACGAGNANATGCNACAAGNNNNAGAGNAAGGCACGG 1079
consensus_9216#3 ------------------------------------------------------------
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 AGAGGAAGTAACGTTTTGATTATTTGAAGAAAAAAAAATCCATTTTCTTGATAAGTAAGT 1052
consensus_9216#2 ------------------------------------------------------------
consensus_9216#1 ANGGNNCNAGNNCCGGGAGCNGNGAAACGGGCGNGCGAGNAGAGGGNGAGAGGACNGCTG 1139
consensus_9216#3 ------------------------------------------------------------
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 CCTAACACCCTCGAATGTCTTATCGGCCGGCAAGGAGAGTGATCGTACAAACACGAGTGT 1112
consensus_9216#2 ------------------------------------------------------------
consensus_9216#1 GCGGGGNNTGGGGNGGGGTGNNGNCNAGGCGCGGGCNGA--------------------- 1178
consensus_9216#3 ------------------------------------------------------------
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 GCTGCTGCTGCTGCTGCTGCTACCGTCGATTTGAACGATCATCCATTCCTTCTTGCCTTT 1172
consensus_9216#2 ------------------------------------------------------------
consensus_9216#1 ------------------------------------------------------------
consensus_9216#3 ------------------------------------------------------------
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 CGAAAAAATGACTGGAGCTGCTGTCCTAGAGAATCCAAAATTTGAAGAAACGACATGAAA 1232
consensus_9216#2 ------------------------------------------------------------
consensus_9216#1 ------------------------------------------------------------
consensus_9216#3 ------------------------------------------------------------
consensus_9216#4 ------------------------------------------------------------
consensus_9216#0 AAAAAAGAACTTGCGCAGCTTCTGTATGTAAAAAGGCAAAATATCGCTCCCCCTTATAAA 1292
consensus_9216#2 ------------------------------------------------------------
consensus_9216#1 ------------------------------------------
consensus_9216#3 ------------------------------------------
consensus_9216#4 ------------------------------------------
consensus_9216#0 CCATGAACTAACCTACCACGAACAAGTAAGTGTAAACACAAT 1334
consensus_9216#2 ------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||