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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9234#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 954 fasta sequence
[NGCAAGAAATTGCCCCGAGGTTNGCAGATAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCTGAACGATGTGCACCAGCAGCAACGNGCTGCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGAACAAGTGAGAAGATGTGCGCTGCAAGATCAACGAGAACCCGCTTGGGTGCCGATCGGGGTGCGCCCGCCACGCTTGACCGCGCTCCGGTTCGGGCCTGTGGAACTTCCCGCAGGTGGCCGGTCCCAGATTGGTCGACAGGTACATTGTATGCGTGNGGCTGCGCATACTTGGCCAAGGGGCTTCACCCGTGATTTGCNGCTCATTCATTTGGGCGGTGGGGCATTGCACGTACGTGCAGGCCAACGGAGCCCGGATGGNCAAAAGAAGTTAGACTCCCCGGGATTATTGTNATAAGAGTTTNGTAACCCAAAATTTTGTTCGACTTTGTAATTTTATAATCTTGATTTGGAATAGAGATGCGGGGTTGGGAAGCTGGGGGAAGGGGTTGGAGAANTGGAAGAGAAGANNNATGAAACCCCCANNACACTCGCNAANATAAAGGGAAACAGAACAANAAACTGAGTACNGGNTAGGAAGAACCANGGNCGACNACNNGNAGNAACGNNCNNNANACNCAACCANACCNAANAAAAAACCGCACAANAAACAANACAACGNNANGNNNAGGCCNNAACAAGANGANAGCAAGGANACNNCNCNACACNGCNCAGANNAGCACCGAGCGCAGANCGAGAAGGCACGAGNNNCAGCAGGGAAGAACNGAAAGGAAAAACAACANGACCAACAGNGCNAGGACGNCAAGAAAACANGNACAGACAAGNCAAGNANAAAGAAACCAAGCNNNNAANACCACAGGCACCANANAC]
[+] EMBL AL696381 [NGCAAGAAATTGCCCCGAGGTTNGCAGATAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCTGAACGATGTGCACCAGCAGCAACGNGCTGCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGAACAAGTGAGAAGATGTGCGCTGCAAGATCAACGAGAACCCGCTTGGGTGCCGATCGGGGTGCGCCCGCCACGCTTGACCGCGCTCCGGTTCGGGCCTGTGGAACTTCCCGCAGGTGGCCGGTCCCAGATTGGTCGACAGGTACATTGTATGCGTGNGGCTGCGCATACTTGGCCAAGGGGCTTCACCCGTGATTTGCNGCTCATTCATTTGGGCGGTGGGGCATTGCACGTACGTGCAGGCCAACGGAGCCCGGATGGNCAAAAGAAGTTAGACTCCCCGGGATTATTGTNATAAGAGTTTNGTAACCCAAAATTTTGTTCGACTTTGTAATTTTATAATCTTGATTTGGAATAGAGATGCGGGGTTGGGAAGCTGGGGGAAGGGGTTGGAGAANTGGAAGAGAAGANNNATGAAACCCCCANNACACTCGCNAANATAAAGGGAAACAGAACAANAAACTGAGTACNGGNTAGGAAGAACCANGGNCGACNACNNGNAGNAACGNNCNNNANACNCAACCANACCNAANAAAAAACCGCACAANAAACAANACAACGNNANGNNNAGGCCNNAACAAGANGANAGCAAGGANACNNCNCNACACNGCNCAGANNAGCACCGAGCGCAGANCGAGAAGGCACGAGNNNCAGCAGGGAAGAACNGAAAGGAAAAACAACANGACCAACAGNGCNAGGACGNCAAGAAAACANGNACAGACAAGNCAAGNANAAAGAAACCAAGCNNNNAANACCACAGGCACCANANAC]
consensusID : consensus_9234#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 871 fasta sequence
[NGCAAAATNCCCCGAGGTTAAAATTAGTGCAATTTATTCAGCCGGAACGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCTGGCTGTGCACGCGTGAAACGACCAANGAGAAGATGGCTGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCTGGGTGCGCCGCCACGCGTGACCGCGCTCGTGCTTCGGGCTGTGGAACTTCCGCCAGGGCCCGGTCCCAGATGTACGGCAGTAACATGATGCGGGCGCGCATACCTGGCCCAGNGNCTATACACCGCTGATTGCGCTCATCATAAGGCGTGGGGCATGCACGTACGGGAGGAANGGANACCGGCGGGCAAAGAAGGTAGACTACCGGATACTTGTCAAAAAGAGTACCAAAATNAGCGCTNCCGGCCTANTGGCTANCANNACTTNNAACCTCCCTAGAACTGGGGACANTAANAAGGAATTTGCCGGGTTGNGGAAAGCCCTGGCTGNGGAAAAGGGGGGANGGCNNAGACCACCACAACGANANAACNCANCACAACAAAACANNGACANCNCAANACAAACACCCCCAGCCCACACACGCAAAACCACACANCAACCGCAACAGACCACACAAGCCCCCACCACANNCACCCCAGCACACANCCACACANAACNANCNAACAACCCCACAACANCNACAANACANNACACCGAACCACCCNCAGANAAAGANCCAGCCACNAACACCCAGCCACCAACGNAAGCAAACNCGAAC]
[+] EMBL AL934576 [NGCAAAATNCCCCGAGGTTAAAATTAGTGCAATTTATTCAGCCGGAACGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCTGGCTGTGCACGCGTGAAACGACCAANGAGAAGATGGCTGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCTGGGTGCGCCGCCACGCGTGACCGCGCTCGTGCTTCGGGCTGTGGAACTTCCGCCAGGGCCCGGTCCCAGATGTACGGCAGTAACATGATGCGGGCGCGCATACCTGGCCCAGNGNCTATACACCGCTGATTGCGCTCATCATAAGGCGTGGGGCATGCACGTACGGGAGGAANGGANACCGGCGGGCAAAGAAGGTAGACTACCGGATACTTGTCAAAAAGAGTACCAAAATNAGCGCTNCCGGCCTANTGGCTANCANNACTTNNAACCTCCCTAGAACTGGGGACANTAANAAGGAATTTGCCGGGTTGNGGAAAGCCCTGGCTGNGGAAAAGGGGGGANGGCNNAGACCACCACAACGANANAACNCANCACAACAAAACANNGACANCNCAANACAAACACCCCCAGCCCACACACGCAAAACCACACANCAACCGCAACAGACCACACAAGCCCCCACCACANNCACCCCAGCACACANCCACACANAACNANCNAACAACCCCACAACANCNACAANACANNACACCGAACCACCCNCAGANAAAGANCCAGCCACNAACACCCAGCCACCAACGNAAGCAAACNCGAAC]
consensusID : consensus_9234#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 737 fasta sequence
[CCGAGGTTTACTCACAGGTGATTTCGTGTTGATGCGAAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA-GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTT-GTTTTTTTTTGTACCAAAATTTGTTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTGGGAGCTGGGGAAGGGTGGTGATGGGGCGAGCGGTGACCTAATGCATTTGCACCACCTCGTCGGTGACCGTTCGGCCCCATCCCCACCCCCTTTCTCTCTCTCGCTGATGCAACCCGCAGTCGGCGGGGCCAGGGCTAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTTCCCGGGCTGTT]
[+] EMBL AL695414 [CCGAGGTTTACTCACAGGTGATTTCGTGTTGATGCGAAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTTGGTTTTTTTTTGTA ]
[+] EMBL CNS08J5G [ acacttTCACAGGTGATTTCGTGTTGATGCGAAATTAGTGCAA TTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGGGCCGGCGGCAAAGAAGTAGACTCCCGGATTT GTTTTTTTTTGTACCAAAATTTGCTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTGGGAGCTGGGGAAGGGTGGTGATGGGGCGAGCGGTGACCTAATGCATTTGCACCACCTCGTCGGTGACCGTTCGGCCCCATCCCCACCCCCTTTCTCTCTCTCGCTGATGCAACCCGCAGTCGGCGGGGCCAGGGCTAGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTTCCCGGGCTGTT]
[+] EMBL BM641890 [ ccGCGAAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTTGGTTTTTTTTTGTACCAAAATTTGTTC ]
[+] EMBL BX627671 [ GTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTT GTTTTTTTTTGTACCAAAATTTGTTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTG ]
[+] EMBL BM652367 [ ccgCGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGAT GCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTTGGTTTTTTTTTGTACCAAAATTTGTTCGC ]
[+] EMBL BX625445 [ AGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTT GTTTTTTTTTGTACCAAAATTTGTTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTGGG ]
[+] EMBL BX618247 [ ACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACTGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCTTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTT GTTTTTTTTTGTACCAAAATTTGTTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTGGGAGCTGGGGA ]
[+] EMBL BX614234 [ GCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAA GGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTT GTTTTTTTTTGTACCAAAATTTGTTCGCTTGTAATTTTAATCTGATTGGAATAGAGATGCGGGTGGGAGCT ]
[-] EMBL CNS08J5H [ ACCGCGCTCGGCTTCGGGCTGTGGAACTTCCCCCAGGGCCGGTCCCAGTTTTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATAATTGGCGTGGGCATAACGTACGGCAGCAAGGGCGCCGGCGGCAAAGAAGTAAACCCCCGGATTT GTTTTTTTTTGTACCAAAATTTGCTCGCTTGTAATTTTAATCTGATTGG ]
consensusID : consensus_9234#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 668 fasta sequence
[CCGAGGTTATACACACACGCTCACAGGTGATTTCGTGTTGATGCTGAAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCATGCAGCACATCGAACGATGGCTACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATTGCTGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGNNACTTCCGCCAGGGGCCGGTCCCCAGATGTCGCAGTACATTGATGCGGGCTGCGCATTCCTTGTGCCCCAGGGGCTTTCACCCGGTGATTTGCGCTCAATCATATGGGCCGTTGGGCCACTGAACGGTACCGGCCACGCCACAAGGGAAGACCCCCTGTGGCNCGGGGCNCAAACGAAAAAGCTTACGAACTTCCCCCCCGGAACTTTCNGGGTTATANATCATCATCTGGTNAACCCCCAACAAACAATTTTTGGNATCCNGCCTTTGGCGTAACACNTTNTATCTAACACTCCCTCGGACTTTCGGGCCCACTTACACA]
[+] EMBL AL694173 [CCGAGGTTATACACACACGCTCACAGGTGATTTCGTGTTGATGCTGAAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCATGCAGCACATCGAACGATGGCTACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATTGCTGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGNNACTTCCGCCAGGGGCCGGTCCCCAGATGTCGCAGTACATTGATGCGGGCTGCGCATTCCTTGTGCCCCAGGGGCTTTCACCCGGTGATTTGCGCTCAATCATATGGGCCGTTGGGCCACTGAACGGTACCGGCCACGCCACAAGGGAAGACCCCCTGTGGCNCGGGGCNCAAACGAAAAAGCTTACGAACTTCCCCCCCGGAACTTTCNGGGTTATANATCATCATCTGGTNAACCCCCAACAAACAATTTTTGGNATCCNGCCTTTGGCGTAACACNTTNTATCTAACACTCCCTCGGACTTTCGGGCCCACTTACACA]
consensusID : consensus_9234#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 536 fasta sequence
[CAATTTTGTACCCACTGTCGTTGACCCTACCATCCCCGTTCCCTGCTCTCTCGCCGCAGTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACTACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGTAGCAAGGAGCCGGAGGCAAAGAAGTAGACTCCCGGATTATTTTTTTTGTACCAAAATTTGTTGCTTGTAATTTTAATCTGATTGGAATAG]
[+] EMBL BX626898 [CAATTTTGTACCCACTGTCGTTGACCCTACCATCCCCGTTCCCTGCTCTCTCGCCGCAGTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACTACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGTAGCAAGGAGCCGGAGGCAAAGAAGTAGACTCCCGGATTATTTTTTTTGTACCAAAATTTGTTGCTTGTAATTTTAATCTGATTGGAATAG]
consensusID : consensus_9234#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 457 fasta sequence
[GCATCGGGTAAGGAATAGTGCAACTTTACTTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAAGGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTCG]
[+] EMBL BX469020 [GCATCGGGTAAGGAATAGTGCAACTTTACTTCAGCCGGAACCGAAACGCAGCGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCGAACGATGGCACCAGCAGCAACGGCCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGATACAGATGCGGAAGGACTTTTCCGGCGTGCACGCGGAAACGACCAAGGAGAAGATGGCGCGCAAGATCAACGAGAACCCGCTGGTGCCGATCGGGTGCGCCGCCACGCTGACCGCGCTCGGCTTCGGGCTGTGGAACTTCCGCCAGGGCCGGTCCCAGATGTCGCAGTACATGATGCGGGCGCGCATCCTGGCCCAGGGCTTCACCGTGATTGCGCTCATCATTGGCGTGGGCATGACGTACGGCAGCAAGGAGCCGGCGGCAAAGAAGTAGACTCCCGGATTCG]
consensusID : consensus_9234#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 421 fasta sequence
[AATGCCCCGGTTANAACACACGCTCACAGGTGATTCGTGTTGATGCTNAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCTGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCTGAACGATGGCACCAGNCAGCAACGGCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGNNTACAGATGCGGAAGGACTTTTCCGGCGTGCACCGCGGAAACGAGACCAACGGAGAAGATGGNCGCCGCAAGATCCAACGAGAAACCCGCTGGGTGCCGATCTGGGGTTGCGCCCGCAACGCTGAACCGGGCTCGGGCNTTCCGGGGCCTGTAGGAAACTTCCCGCCAGGGCCGGTCCCAGATGTTCNGGGCAAGGTAACAATGGATTGCGG]
[+] EMBL AL694253 [AATGCCCCGGTTANAACACACGCTCACAGGTGATTCGTGTTGATGCTNAATTAGTGCAACTTTATTCAGCCGGAACCGAAACGCAGCTGCAGATCAAAACCACTCGCAACGCCCATCAACAACGCAAGAGCAGCAGCACATCTGAACGATGGCACCAGNCAGCAACGGCGCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGNNTACAGATGCGGAAGGACTTTTCCGGCGTGCACCGCGGAAACGAGACCAACGGAGAAGATGGNCGCCGCAAGATCCAACGAGAAACCCGCTGGGTGCCGATCTGGGGTTGCGCCCGCAACGCTGAACCGGGCTCGGGCNTTCCGGGGCCTGTAGGAAACTTCCCGCCAGGGCCGGTCCCAGATGTTCNGGGCAAGGTAACAATGGATTGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9234#2 ------------CCGAGGTT-TACTCACAGGTGATTTCGTGTTGATGCGAAA-TTAGTGC 46
consensus_9234#4 -------------CAATTTTGTACCCACTGTCGTTGACCCTACCATCCCCGT-TCCCTGC 46
consensus_9234#0 ------------------------------------------------------------
consensus_9234#5 --------------------------------------GCATCGGGTAAGGA-ATAGTGC 21
consensus_9234#1 -----------------------------------NGCAAAATNCCCCGAGG-TTAAAAT 24
consensus_9234#3 ----CCGAGGTTATACACACACGCTCACAGGTGATTTCGTGTTGATGCTGAAATTAGTGC 56
consensus_9234#6 AATGCCCCGGTTANA-ACACACGCTCACAGGTGATT-CGTGTTGATGCTNAA-TTAGTGC 57
consensus_9234#2 AACTTT-----ATTCAGCCGGAACCGAAACGCAG--CGCAGATCAAAACCACTCGCAACG 99
consensus_9234#4 TCTCTCGCCGCAGTCAGCCGGAACCGAAACGCAG--CGCAGATCAAAACCACTCGCAACG 104
consensus_9234#0 --------------NGCAAGAAATTGCCCCGAGGTTNGCAGAT-AAAACCACTCGCAACG 45
consensus_9234#5 AACTTTA----CTTCAGCCGGAACCGAAACGCAG--CGCAGATCAAAACCACTCGCAACG 75
consensus_9234#1 TAGTGCAATTTATTCAGCCGGAAC-GAAACGCAG--CGCAGATCAAAACCACTCGCAACG 81
consensus_9234#3 AACTTT-----ATTCAGCCGGAACCGAAACGCAGC--GCAGATCAAAACCACTCGCAACG 109
consensus_9234#6 AACTTT-----ATTCAGCCGGAACCGAAACGCAGC-TGCAGATCAAAACCACTCGCAACG 111
* ** * ** * ****** ****************
consensus_9234#2 CCCATCAACAACGCAAGAGCA-GCAGCACATC-GAACGATG-GCACCAGCAGCAACGGCC 156
consensus_9234#4 CCCATCAACTACGCAAGAGCA-GCAGCACATC-GAACGATG-GCACCAGCAGCAACGGCC 161
consensus_9234#0 CCCATCAACAACGCAAGAGCA-GCAGCACATCTGAACGATGTGCACCAGCAGCAACGNGC 104
consensus_9234#5 CCCATCAACAACGCAAGAGCA-GCAGCACATC-GAACGATG-GCACCAGCAGCAACGGCC 132
consensus_9234#1 CCCATCAACAACGCAAGAGCA-GCAGCACATC-GAACGATG-GCACCAGCAGCAACGGCC 138
consensus_9234#3 CCCATCAACAACGCAAGAGCATGCAGCACATC-GAACGATGGCTACCAGCAGCAACGGCC 168
consensus_9234#6 CCCATCAACAACGCAAGAGCA-GCAGCACATCTGAACGATGGCACCAGNCAGCAACGGC- 169
********* *********** ********** ******** * ********
consensus_9234#2 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATG--CGGAAGGAC 213
consensus_9234#4 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATG--CGGAAGGAC 218
consensus_9234#0 TGCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATG--CGGAAGGAC 161
consensus_9234#5 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATG--CGGAAGGAC 189
consensus_9234#1 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATG--CGGAAGGAC 195
consensus_9234#3 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGAT-ACAGATTGCTGGAAGGAC 227
consensus_9234#6 GCCCCGGTCGTCGATCTGTCGACGGAGGAGCTGGACTGGNNTACAGATG--CGGAAGGAC 227
************************************* ****** ********
consensus_9234#2 TTTTCCGG--CGTGCAC-GCG-GAAACGA--CCAAG-GAGAAGATG-GCGC-GCAAGATC 264
consensus_9234#4 TTTTCCGG--CGTGCAC-GCG-GAAACGA--CCAAG-GAGAAGATG-GCGC-GCAAGATC 269
consensus_9234#0 TTTTCCGG--CGTGCAC-GCG-GAAACGA--ACAAGTGAGAAGATGTGCGCTGCAAGATC 215
consensus_9234#5 TTTTCCGG--CGTGCAC-GCG-GAAACGA--CCAAG-GAGAAGATG-GCGC-GCAAGATC 240
consensus_9234#1 TTTTCCTGGCTGTGCAC-GCGTGAAACGA--CCAAN-GAGAAGATGGCTGC-GCAAGATC 250
consensus_9234#3 TTTTCCGG--CGTGCAC-GCG-GAAACGA--CCAAAGGAGAAGATGGCG--CGCAAGATC 279
consensus_9234#6 TTTTCCGG--CGTGCACCGCG-GAAACGAGACCAACGGAGAAGATGGNCGCCGCAAGATC 284
****** * ****** *** ******* *** ********* ********
consensus_9234#2 -AACGAGAA-CCCGCT--GGTGCCGATCGGG---TGCGCC-GCCACGCT-GACCGCGCTC 315
consensus_9234#4 -AACGAGAA-CCCGCT--GGTGCCGATCGGG---TGCGCC-GCCACGCT-GACCGCGCTC 320
consensus_9234#0 -AACGAGAA-CCCGCTTGGGTGCCGATCGGGG--TGCGCCCGCCACGCTTGACCGCGCTC 271
consensus_9234#5 -AACGAGAA-CCCGCT--GGTGCCGATCGGG---TGCGCC-GCCACGCT-GACCGCGCTC 291
consensus_9234#1 -AACGAGAA-CCCGCT--GGTGCCGATCTGGG--TGCGCC-GCCACGCGTGACCGCGCTC 303
consensus_9234#3 -AACGAGAA-CCCGCT-GGGTGCCGATCGGG---TGCGCC-GCCACGCTGA-CCGCGCTC 331
consensus_9234#6 CAACGAGAAACCCGCT-GGGTGCCGATCTGGGGTTGCGCCCGCAACGCTGAACCGGGCTC 343
******** ****** ********** ** ****** ** **** *** ****
consensus_9234#2 G--GCTTCGGGC---TGT--GGAACTTCCGCCAGG--GCCGGTCCC-AGAT--GTCG--- 360
consensus_9234#4 G--GCTTCGGGC---TGT--GGAACTTCCGCCAGG--GCCGGTCCC-AGAT--GTCG--- 365
consensus_9234#0 C--GGTTCGGGCC--TGT--GGAACTTCCCGCAGGTGGCCGGTCCC-AGATTGGTCGACA 324
consensus_9234#5 G--GCTTCGGGC---TGT--GGAACTTCCGCCAGG--GCCGGTCCC-AGAT--GTCG--- 336
consensus_9234#1 GT-GCTTCGGGC---TGT--GGAACTTCCGCCAGG-GCCCGGTCCC-AGATGTACGG--- 352
consensus_9234#3 GG--CTTCGGG---CTGT-GGNNACTTCCGCCAGG-GGCCGGTCCCCAGAT-GT-CG--- 379
consensus_9234#6 GGGCNTTCCGGGGCCTGTAGGAAACTTCCCGCCAG-GGCCGGTCCC-AGAT-GTTCN--- 397
*** ** *** * ****** * * ******** ****
consensus_9234#2 ----CAGTA-CATG-ATG--CGGGCGCGCATCCTG---GCCCA--GGGCTT--CACC-GT 404
consensus_9234#4 ----CAGTA-CATG-ATG--CGGGCGCGCATCCTG---GCCCA--GGGCTT--CACC-GT 409
consensus_9234#0 GGTACATTG-TATGCGTG--NGGCTGCGCATACTT---GGCCAAGGGGCTT--CACCCGT 376
consensus_9234#5 ----CAGTA-CATG-ATG--CGGGCGCGCATCCTG---GCCCA--GGGCTT--CACC-GT 380
consensus_9234#1 ----CAGTAACATG-ATG--CGGGCGCGCATACCT---GGCCCAGNGNCTATACACCGCT 402
consensus_9234#3 ----CAGTACATTG-ATG-CGGGCTGCGCATTCCTTGTGCCCCAGGGGCTTTCACCCGGT 433
consensus_9234#6 ----GGGCAAGGTA-ACAATGGATTGCGG------------------------------- 421
* * ***
consensus_9234#2 GATTG--CGCTCAT-CATTGGCGTGG----GCATG--ACGTACG-GCAG--CAA-GGAGC 451
consensus_9234#4 GATTG--CGCTCAT-CATTGGCGTGG----GCATG--ACGTACG-GTAG--CAA-GGAGC 456
consensus_9234#0 GATTTGCNGCTCATTCATTTGGGCGGTGGGGCATTGCACGTACGTGCAGGCCAACGGAGC 436
consensus_9234#5 GATTG--CGCTCAT-CATTGGCGTGG----GCATG--ACGTACG-GCAG--CAA-GGAGC 427
consensus_9234#1 GATTG--CGCTCATCATAAGGCGTGG---GGCATG-CACGTACGGGAGG---AANGGANA 453
consensus_9234#3 GATTTG-CGCTCAATCATATGGGCCG---------------TTGGGCCACTGAACGGTAC 477
consensus_9234#6 ------------------------------------------------------------
consensus_9234#2 C--GGCGGC--AAAGAAGT-AGACTCCC--GGATTTGTTTTTT------TTTGTA--CCA 496
consensus_9234#4 C--GGAGGC--AAAGAAGT-AGACTCCC--GGATTA--TTTTT------TTTGTA--CCA 499
consensus_9234#0 CCGGATGGNCAAAAGAAGTTAGACTCCCCGGGATTATTGTNATAAGAGTTTNGTAACCCA 496
consensus_9234#5 C--GGCGGC--AAAGAAGT-AGACTCCC--GGATTCG----------------------- 457
consensus_9234#1 CCGGCGGGC--AAAGAAGGTAGACTACC--GGATACTTGTCAAAAAGAGTACCAAAATNA 509
consensus_9234#3 C--GGCCACGCCACAAGGGAAGACCCCCTGTGGCNCGGGGCNCAAACGAAAAAGCTTACG 535
consensus_9234#6 ------------------------------------------------------------
consensus_9234#2 AAATTT-------GTTCG--CTTGTAATTTTA--ATCT-----GA--TTGGAATAGAGAT 538
consensus_9234#4 AAATTT-------GTT-G--CTTGTAATTTTA--ATCT-----GA--TTGGAATAG---- 536
consensus_9234#0 AAATTTT------GTTCGACTTTGTAATTTTATAATCT-----TGATTTGGAATAGAGAT 545
consensus_9234#5 ------------------------------------------------------------
consensus_9234#1 GCGCTNCCGGCCTANTGGCTANCANNACTTNN-AACCTCCCTAGAACTGGGGACANTAAN 568
consensus_9234#3 AACTTCCC---CCCCGGAACTTTCNGGGTTATANATCATCATCTGGTNAACCCCCAACAA 592
consensus_9234#6 ------------------------------------------------------------
consensus_9234#2 GCGGGT---GGGAGCTGGGGAAGGGTGGTGATGGGGCG--AGCGGTGACCTAATGCATTT 593
consensus_9234#4 ------------------------------------------------------------
consensus_9234#0 GCGGGGTTGGGAAGCTGGGGGAAGGGGTTGGAGAANTGGAAGAGAAGANNNATGAAACCC 605
consensus_9234#5 ------------------------------------------------------------
consensus_9234#1 AAGGAATTTGCCGGGTTGNGGAAAGCCCTGGCTGNGGAAAAGGGGGGANGGCNNAGACCA 628
consensus_9234#3 ACAATTTTTGGNATCCNGCCTTTGGCGTAACACNTTNTATCTAACACTCCCTCGGACTTT 652
consensus_9234#6 ------------------------------------------------------------
consensus_9234#2 GCACCAC-CTCGTCGGTG---------ACCGTTCGGCCCCATCCCCACCCCCTTTCTCTC 643
consensus_9234#4 ------------------------------------------------------------
consensus_9234#0 CCANNACACTCGCNAANATAAAGGGAAACAGAACAANAAACTGAGTACNGGNTAGGAAGA 665
consensus_9234#5 ------------------------------------------------------------
consensus_9234#1 CCACAACGANANAACNCANCACAACAAAACANNGACANCNCAANACAAACACCCCCAGCC 688
consensus_9234#3 CGGGCCCACTTACACA-------------------------------------------- 668
consensus_9234#6 ------------------------------------------------------------
consensus_9234#2 TCTCGCTGATGCAACCCGCAGTCGGCGGGGCCAGGGCTAGCTAAAAAAAAAAAAAAAAAA 703
consensus_9234#4 ------------------------------------------------------------
consensus_9234#0 ACCANGGNCGACNACNNGNAGNAACGNNCNNNANACNCAACCANACCNAANAAAAAACCG 725
consensus_9234#5 ------------------------------------------------------------
consensus_9234#1 CACACACGCAAAACCACACANCAAC-CGCAACAGACCACACAAGCCCCCACCACANNCAC 747
consensus_9234#3 ------------------------------------------------------------
consensus_9234#6 ------------------------------------------------------------
consensus_9234#2 AAAAAAAAAAAAGGCCACATGTTCCCGGGCTGTT-------------------------- 737
consensus_9234#4 ------------------------------------------------------------
consensus_9234#0 CACAANAAACAANACAACGNNANGNNNAGGCCNNAACAAGANGANAGCAAGGANACNNCN 785
consensus_9234#5 ------------------------------------------------------------
consensus_9234#1 CCCAGCACACANCCACACANAACNANCNAACAACCCCACAACANCNACAANACANNACAC 807
consensus_9234#3 ------------------------------------------------------------
consensus_9234#6 ------------------------------------------------------------
consensus_9234#2 ------------------------------------------------------------
consensus_9234#4 ------------------------------------------------------------
consensus_9234#0 CNACACNGCNC-AGANNAGCACCGAGCGCAGANCGAGAAGGCACGAGNNNCAGCAGGGAA 844
consensus_9234#5 ------------------------------------------------------------
consensus_9234#1 CGAACCACCCNCAGANAAAGANCCAGCCACNAACACCCAGCCACCAACGNAAGCAAACNC 867
consensus_9234#3 ------------------------------------------------------------
consensus_9234#6 ------------------------------------------------------------
consensus_9234#2 ------------------------------------------------------------
consensus_9234#4 ------------------------------------------------------------
consensus_9234#0 GAACNGAAAGGAAAAACAACANGACCAACAGNGCNAGGACGNCAAGAAAACANGNACAGA 904
consensus_9234#5 ------------------------------------------------------------
consensus_9234#1 GAAC-------------------------------------------------------- 871
consensus_9234#3 ------------------------------------------------------------
consensus_9234#6 ------------------------------------------------------------
consensus_9234#2 --------------------------------------------------
consensus_9234#4 --------------------------------------------------
consensus_9234#0 CAAGNCAAGNANAAAGAAACCAAGCNNNNAANACCACAGGCACCANANAC 954
consensus_9234#5 --------------------------------------------------
consensus_9234#1 --------------------------------------------------
consensus_9234#3 --------------------------------------------------
consensus_9234#6 --------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||