These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9261#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1865 fasta sequence [CCCCGNGGTTCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTGGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTACTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGTTTCGTCCCGCAGCAGATATACCTCTGTGTGTATCTGGTAGCCTGTTTGTGTGTGTATGTATGTGTGTATGTAACTCTTTTCGTACAG--GGC--TTTTGGGTAGGCACATTTTATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCAATGCACTCAATGGGGGAACCAGCAGCAAAACATAATGCAGTGGGCTGGATCACTGTTTAGTAAACCTTTATCTGCACACTATAACTGTTACTATTGCAAATTCTGTGGTTTCCGTCTCCCTCTATTTCTCCTTTTAAAAGGGTTTATTTTCACGTTAATTTCCCACTTGTTCTTTT-CCTGTAAATCTAA-AGTAAAGGTTTTGACTATCTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGAANACGAAGACACGCAAAAAACCCCGCGTTGATACTAATGCTAACATGATATTGATGATATGATGGAAGAGAGCGTGAGGGGGTGAGATAGAGAAATGATTGTGTTTTCCTTCCGCTATTAATTTTTATAACCTTCCATACAAGAAAAAAAGAGAAAAATCCAGCCGCAAATAGGAAAACAGTTGAACGACGCGAGGGAGAATGTGTTTTCATGAAACAAAACAAAAAAAAAGAAGCAGAGATATACTCGATAAAAAAGAAGCCGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGAAGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACACACAAACACACACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAAGCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGTGTGAACTGTTAAACAAAAAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC-AAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCTTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACAAACAAATAGACAAACAAATATTGAGCTGAAGGGCAAACAAAAAATAAACAGCTGGATAAGCATTAGGAAGA] [+] EMBL AL694479 [CCCCGNGGTTCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTGGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTACTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGTTTCGTCCCGCAGCAGATATACCTCTGTGTGTATCTGGTAGCCTGTTTGTGTGTGTATGTATGTGTGTATGTAACTCTTTTCGTACAGTTGGC TTTTGGGTAGGCACATTTTATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCAATGCACTCAATGGGGGAACCAGCAGCAAAACATAATGCAGTGGGCTGGATCACTGTTTAGTAAACCTTTATCTGCACACTATAACTGTTACTATTGCAAATTCTGTGGTTTCCGTCTCCCTCTATTTCTCCTTTTAAAAGGGTTTATTTTCACGTTAATTTCCCACTTGTTCTTTTACCTGTAAATCTAACAGTAAAGGTTTTGACTATCTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGAANACGAAGACAC ] [+] EMBL BM638195 [ ccG GGCTTTTTTGGGTAGGCACATTTTATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCAATGCACTCAATGGGGGAACCAGCAGCAAAACATAATGCAGTGGGCTGGATCACTGTTTAGTAAACCTTTATCTGCACACTATAACTGTTACTATTGCAAATTCTGTGGTTTCCGTCTCCCTCTATTTCTCCTTTTAAAAGGGTTTATTTTCACGTTAATTTCCCACTTGTTCTTTT CCTGTAAATCTAA AGTAAAGGTTTTGACTATCTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGAAGAAGAAGACACGCAAAAAACCCCGCGTTGATACTAATGCTAACATGATATTGATGATATGATGGAAGAGAGCGTGAGGGGGTGAGATAGAGAAATGATTGTGTTTTCCTTCCGCTATTAATTTTTATAACCTTCCATACAAGAAAAAAAGAGAAAAATCCAGCCGCAAATAGGAAAACAGTTGAACGACGCGAGGGAGAATGTGTTTTCATGAAACAAAACAAAAAAAAAGAAGCAGAGATATACTCGATAAAAAAGAAGCCGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGAAGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACAC ] [+] EMBL CNS098XT [ tcAAGCAGAGATATACTCGATAAAAAAGAAGCCGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGAAGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACACACAAACACACACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAAGCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGTGTGAACTGTTAAACAAAAAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC AAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCTTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGTGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAG ] [+] EMBL CNS09H61 [ ATATACTCGATAAAAAAGAAGCCGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGAAGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACACACAAACACACACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAAGCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGTGTGAACTGTTAAACAAAAAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC AAAAAAAAAAAAAGGGAAAGCAAAACAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGA ] [+] EMBL CNS09A2U [ ATACTCGATAAAAAAGAAGCCGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGAAGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACACACAAACACACACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAAGCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGTGTGAACTGTTAAACAAAAAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC AAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGA ] [-] EMBL CNS098XU [ GGCGATATCTTTAAGATCCTTTCTACCATCCCCCCCCCCCCGACACACAAAAAAACACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAAGCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGTGTGAACTGTTAAACAAAAAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC AAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCTTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGTGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACC ] [-] EMBL CNS09A2V [ AAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGC AAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTG TTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACAAACAAATAGACAAATAAA ] [-] EMBL CNS09H62 [ CACAGAACGGCGGATTGGGTAAAGCAGCATTAATATATACATGAATGAGCAAAAAAAAAAAAAAGGGAAAGCAAAGCAGAAATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAACAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGCTCCTCGCAGGAAACATGCAACAGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCTGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCTTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACAAACAAATAGACAAACAA ] [+] EMBL AGA280702 [ TTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCTTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACATACAAATAGACAAACAAATATTGAGCTGAAGGGCAAACAAAAAATAAACAGCTGGATAAGCATTAGGAAGA] consensusID : consensus_9261#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1156 fasta sequence [CCGGCGGCGGCGGTGGCGGTGGTGGCGGAAGTGCACAGAAGAACAAGCGCATGGTCGATGAGGATGGGTTTATGCTGCCGGCCAACTCGCGCAACAATGCCTGGACCATGCTATCGATCGATCCGAAGAAGATAAACATTTCGGCACCTAAACCGCAGACTGGTGAAACGCGCCTCGGATCGGCCTCCATGTTCCAGGGCTGGGGTGGAAAAACAAACAACGTGTTCGCGTCCCTCAACATTGACGAGTCGGCTGCCCAACCGCCAAGCTTCTTCGGTGCGTCCGGTCCGATGGGTGGTGGCAGTAGTGGTGGTGGTGGTGGTGGAAGTGGCGGAAGTGGCGGCAGCGGTGGTGGTGGACGAGGAGGTGGTGGTGGTGGAGGTGGTTCCAAGGGTTCGCAATCCCACAAAAAGGGTGGCGGCGGCGGCGGTGGCAACAACTCTAAAACGCCCCATTACCTCGGCCGAACCAGCAGCCACTTGTGATAGGGCAATCATCAGCAGCAATGATCGATCGACACCGAACAGCAGCACTAACCCCCCGGCCATCATCATCCACGTGCAATGAGGTAACAGTGGAGAGAGAGAGAGAGA-AATGGGAGAGAAACACACAGCAGCCAAGGAGTGCGGCTGCAAAATTGTGAAGCGCTGGCGCAGAAATGATCGAGAAAATCACGAGAAGAAGCTAAATTTGCTGCGAAAGATGAGGGTAGATGATGGAGGTGCGCGAGTGGGGCTGCTCTGTTTTGTTTACGCTACTACCACATCCCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTTGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTACTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGTTTCGTCCCGCAGCAGATATACCTCTGTGTGTATCTGGTAGCCTGTTTGTGTGTGTATGTATGTGTGTATGTAACTCTTTTCGTACAGTTGGCTTTTTTGGGTAGGCACATTTTATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCNAT] [+] EMBL BM639459 [CCGGCGGCGGCGGTGGCGGTGGTGGCGGAAGTGCACAGAAGAACAAGCGCATGGTCGATGAGGATGGGTTTATGCTGCCGGCCAACTCGCGCAACAATGCCTGGACCATGCTATCGATCGATCCGAAGAAGATAAACATTTCGGCACCTAAACCGCAGACTGGTGAAACGCGCCTCGGATCGGCCTCCATGTTCCAGGGCTGGGGTGGAAAAACAAACAACGTGTTCGCGTCCCTCAACATTGACGAGTCGGCTGCCCAACCGCCAAGCTTCTTCGGTGCGTCCGGTCCGATGGGTGGTGGCAGTAGTGGTGGTGGTGGTGGTGGAAGTGGCGGAAGTGGCGGCAGCGGTGGTGGTGGACGAGGAGGTGGTGGTGGTGGAGGTGGTTCCAAGGGTTCGCAATCCCACAAAAAGGGTGGCGGCGGCGGCGGTGGCAACAACTCTAAAACGCCCCATTACCTCGGCCGAACCAGCAGCCACTTGTGATAGGGCAACCATCAGCAGCAATGATCGATCGACACCGAACAGCAGCACTAACCCTCCGGCCATCATCATCCACGTGCAATGAGGTAACAGTGGAGAGAGAGAGAGAGATAATGGGTGAGAAACACACAGCAGCCAAGGAGTGCGGCTGCTAAATTGTGAAGCGCTGGCGC ] [+] EMBL BM578837 [ ccgCGGCCAACTCGCGCAACAATGCCTGGACCATGCTATCGATCGATCCGAAGAAGATAAACATTTCGGCACCTAAACCGCAGACTGGTGAAACGCGCCTCGGATCGGCCTCCATGTTCCAGGGCTGGGGTGGAAAAACAAACAACGTGTTCGCGTCCCTCAACATTGACGAGTCGGCTGCCCAACCGCCAAGCTTCTTCGGTGCGTCCGGTCCGATGGGTGGTGGCAGTAGTGGTGGTGGTGGTGGTGGAAGTGGCG ] [+] EMBL BM603805 [ ccgggaggtGGTTCGCAATCCCACAAAAAGGGTGGCGGCGGCGGCGGTGGCAACAACTCTAAAACGCCCCATTACCTCGGCCGAACCAGCAGCCACTTGTGATAGGGCAATCATCAGCAGCAATGATCGATCGACACCGAACAGCAGCACTAACCCCCCGGCCATCATCATCCACGTGCAATGAGGTAACAGTGGAGAGAGAGAGAGAG AATGGGAGAGAAACACACAGCAGCCAAGGAGTGAGGCTGCAAAATTGTGAAGCGCTGGCGCAGAAATGATCGAGAAAATCACGAGAAGAAGCTAAATTTGCTGCGAAAGATGAGGGTAGATGATGGAGGTGCGCGAGTGGGGCTGCTCTGTTTTGTTTACGCTACTACCACATCCCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTTGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTACTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGT ] [+] EMBL BX628664 [ ACCAGCAGCCACTTGTGATAGGGCAATCATCAGCAGCAATGATCGATCGACACCGAACAGCAGCACTAACCCCCCGGCCATCATCATCCACGTGCAATGAGGTAACAGTGGAGAGAGAGAGAGAGAGAATGGGAGAGAAACACACAGCAGCCAAGGAGTGCGGCTGCAAAATTGTGAAGCGCTGGCGCAGAAATGATCGAGAAAATCACGAGGAGAAGCTAAATTTGCTGCGAAAGATGAGGGTAGATGATGGAGGTGCACGAGTGGGGCTGCTCTGTTTTGTTTACGCTACTACCACATCCCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTGGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTACTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGTTTCGTCCCGCAGCAGATATACCTCTGTGTGTATCTGGTAGCCTGTTTGTGTGTGTATGTATGTGTGTATGTAACTCTTTTCGTACAGTTGGCTTTTTTGGGTAGGCACATTTTATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCNAT] consensusID : consensus_9261#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 676 fasta sequence [CCGTTCCCACTTGTTCTTTTCCTGTAAATCTAAAGTAAAGGTTTTGACTATCTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGATTTACATTGAATAAAAGTAAGAGCCGACTTCGGTCGGTATATATTGTTGCAAAAGGGGATTTGCAAAAGGGGACGAAACAGAGGGAGCTGGAAGATCTTGTCTTAACTTGTACCAAACATTAATCGGAAGAAGTTCATGTGTATGGCCACTAATATTAATATTTATGCAGTGAGTTATAGTTGCTTGTGTATGAAAGTATGAACAAGTATCAAACCAAACTTGTAGCCGGGACAGGCACTGGTGCAGCGGTGTTGACGGAACAAGTCGATCCCTTAGGCAAAAATACACAAGATGAAAGGAAGAAACCGACAGCAGTCGGAAGTATTACCCGTGAAGTCGCATCGAACAGCAACGATAATGGGCAGTATACGGATGCAATGAAATTAGACCCATCCCGCATAGAGATTGAAAGCGTTTTAGCGAATGCTATTAAAATAGAAAACTTTACAGAAGAGGACAGTGTCTTCAATGAAGAAAGCATCCCGCTTGATACAATACGGTTACCAAAGAGAAAATATTTCGGGGATAAAGAGTTGGAAGACGATTCCAGTATTACATCAAAATCGCAAGACTCTAACGATGCTTGG] [+] EMBL BM580615 [CCGTTCCCACTTGTTCTTTTCCTGTAAATCTAAAGTAAAGGTTTTGACTATCTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGATTTACATTGAATAAAAGTAAGAGCCGACTTCGGTCGGTATATATTGTTGCAAAAGGGGATTTGCAAAAGGGGACGAAACAGAGGGAGCTGGAAGATCTTGTCTTAACTTGTACCAAACATTAATCGGAAGAAGTTCATGTGTATGGCCACTAATATTAATATTTATGCAGTGAGTTATAGTTGCTTGTGTATGAAAGTATGAACAAGTATCAAACCAAACTTGTAGCCGGGACAGGCACTGGTGCAGCGGTGTTGACGGAACAAGTCGATCCCTTAGGCAAAAATACACAAGATGAAAGGAAGAAACCGACAGCAGTCGGAAGTATTACCCGTGAAGTCGCATCGAACAGCAACGATAATGGGCAGTATACGGATGCAATGAAATTAGACCCATCCCGCATAGAGATTGAAAGCGTTTTAGCGAATGCTATTAAAATAGAAAACTTTACAGAAGAGGACAGTGTCTTCAATGAAGAAAGCATCCCGCTTGATACAATACGGTTACCAAAGAGAAAATATTTCGGGGATAAAGAGTTGGAAGACGATTCCAGTATTACATCAAAATCGCAAGACTCTAACGATGCTTGG] consensusID : consensus_9261#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence [CCGCCCACGCGTCCGGCGAGGAGCAGCCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCCTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACAAACAAATAGACAAACAAATATTGAGCTGAAGGGC] [+] EMBL BM582019 [CCGCCCACGCGTCCGGCGAGGAGCAGCCTGGTTCTTCCCGTAAGCCTCTGTGGCCCAGAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGAAAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGAGCCACATTAAAACAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAATTATTACTCTTCAGTTAATATAACTTTTTTTTGTTGAATATTTACAATATCAAAACGCGCATTGTGCCTTCGCTGATCGTGTGTCGTTGGACGCTAAGCATTAGCGCGCAGCCTCCTCTTCCGTCAAACAAAGAGGTCAAACATCTGCCCTCCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGAAGAATGTAACAAACAAATAGACAAACAAATATTGAGCTGAAGGGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9261#0 CCCCGNGGTTCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTC 60 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ------------------------------------------------------------ consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 AGTGGGTTTTTAACTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCT 120 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ------------------------------------------------------------ consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 CCTTTTCTCATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGGCACCAGGGTTTA 180 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ------------------------------------------------------------ consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 CTACAGGGCCTACTACTGAGAGAGATGAGATCAAGATTAGATCTTCGTCTTCGCCTAGGT 240 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ------------------------------------------------------------ consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 TTCGTCCCGCAGCAGATATACCTCTGTGTGTATCTGGTAGCCTGTTTGTGTGTGTATGTA 300 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ------------------------------------------------------------ consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 TGTGTGTATGTAACTCTTTTCGTACAGGGCTTTTGGGTAGGCACATTTTATGATGAACGC 360 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ------------------------------------------------------------ consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 ATTAAAATTCAATGTATCGCTCTACGCACTCAATGCACTCAATGGGGGAACCAGCAGCAA 420 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ------------------------------------------------------------ consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 AACATAATGCAGTGGGCTGGATCACTGTTTAGTAAACCTTTATCTGCACACTATAACTGT 480 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ------------------------------------------------------------ consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 TACTATTGCAAATTCTGTGGTTTCCGTCTCCCTCTATTTCTCCTTTTAAAAGGGTTTATT 540 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ------------------------------------------------------------ consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 TTCACGTTAATTTCCCACTTGTTCTTTTCCTGTAAATCTAAAGTAAAGGTTTTGACTATC 600 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ------------------------------------------------------------ consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 TAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGAANACGAAGACACGCAAAAAACCCC 660 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 ---------------------------------------------------------CCG 3 consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 GCGTTGATACTAATGCTAACATGATATTGATGATATGATGGAAGAGAGCGTGAGGGGGTG 720 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 GCGGCGGCGGTGGCGGTG--GTGGCGGAAGTGCACAGAAGAACAAGCGCATGGTCGATGA 61 consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 AGATAGAGAAATGATTGTGTTTTCCTTCCGCTATTA-ATTTTTATAACCTTCCATACAAG 779 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 GGATGGGTTTATGCTGCCGGCCAACTCGCGCAACAATGCCTGGACCATGCTATCGATCGA 121 consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 AAAAAAAGAGAAAAATCCAGCCGCAAATAGGAAAACAGTTGAACGACGCGAGGGAGAATG 839 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 TCCGAAGAAGATAAACATTTCGGCACCTAAACCGCAGACTGGTGAAACGCGCCTCGGATC 181 consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 TGTTTTCATGAAACAAAACAAAAAAAAAGAAGCAGA-GATATACTCGATAAAAAAGAAGC 898 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 GGCCTCCATGTTCCAGGGCTGGGGTGGAAAAACAAACAACGTGTTCGCGTCCCTCAACAT 241 consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 CGTACTAATATGTATACATTAGTTGATTAGTTAGGACGCAAAACCGATTAAAAATTGAGA 958 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 TGACGAGTCGGCTGCCCAACCGCCAAGCTTCTTCGGTGCGTCCGGTCCGATGGGTGGTGG 301 consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 AGCGAGGCGATATCTTTAAGATCCTCTCTACCATCCCCCCGCCCCCGACACACAAACACA 1018 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 CAGTAGTGGTGGTGGTGGTGGTGGAAGTGGCGGAAGTGGCGGCAGCGGTGGTGGTGGACG 361 consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 CACACGGTTCTAAGCCAAAACATGCAACAATTGGTGCGGTTGCAGTATGAAACATTTAAA 1078 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 -AGGAGGTGGTGGTGGTGGAGGTGGTTCCAAGGGTTCGCAATCCCACAAAAAGGGTGGCG 420 consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 GCAGAAACTGCTTCCATAAGTACAGTGTTCCCAGCAGACTGT-GTGAACTGTTAAACAAA 1137 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 GCGGCGGCGGTGGCAACAACTCTAAAACGCCCCATTACCTCG-GCCGAACCAGCAGCCAC 479 consensus_9261#2 -------CCGTTCCCACTTGTTC--TTTTCCTGTAAATCTAAAGTAAAGGTTTTGACTAT 51 consensus_9261#0 AAAGAAGAAAAAAGCTAACCGTTTAAAAAACAAAAGTATGGCACAGAACGGCGGATTGGG 1197 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 TTGTGATAGGGCAATCATCAGCAGCAATGATCGATCGACACCGAACAGCAGCACTAACCC 539 consensus_9261#2 CTAAAGTGCGAGGTTGTACAGAAGAAGCAGAAGAAGATTTACATTGAATAAAAGTAAGAG 111 consensus_9261#0 TAAAGCAGCATTAATATATACATGAATGAGCAAAAAAAAAAAAAGGGAAAGCAAAGCAGA 1257 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 CCCGGCCATCATCATCCACGTGCAATGAGGTAACAGTGGAGAGAGAGAGAGAGAAATGGG 599 consensus_9261#2 C----CGACTTCGGTCGGTATATATTGTTGCAAAAGGGGATTTGCAAAAGGGGACGAAAC 167 consensus_9261#0 AATAGCACCATATATATTAGCAATATAAACCATACATTATATATAAACCACATGAGAAAA 1317 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 AGAGAAAC---ACACAGCAGCCAAGGAGTGCGGCTGCAAAAT-TGTGAAGCGCTGGCGCA 655 consensus_9261#2 AGAGGGA------------GCTGGAAGATCTTGTCTTAACTTGTACCAAACATTAATCGG 215 consensus_9261#0 CAAGAAACAACGTGTTTGATGAATATAGACTAAAACAAAGGAAGAGGAGGATGGTGCTGC 1377 consensus_9261#3 ------------------------------------------------------------ consensus_9261#1 GAAATGATCGAGAAAATCACGAGAAGAAGCTAAATTTGCTGCGAAAGATGAGGGTAG--- 712 consensus_9261#2 AAGAAGTTCATGTGTATGGCCACTA-ATATTAATATTTATGCAGTGAGTTATAGTTG--- 271 consensus_9261#0 TCCTCGCAGGAAACATGCAAC-AGTGCAACCTGGTTCTTCCCGTAAGCCTCTGTGGCCCA 1436 consensus_9261#3 -CCGCCCACGCGTCCGGCGA--GGAGCAGCCTGGTTCTTCCCGTAAGCCTCTGTGGCCCA 57 consensus_9261#1 ---ATGATGGAGGTGCGCGAGTGGGGCTGCTCTGTTTTGTT--TACGCTACTACCACATC 767 consensus_9261#2 CTTGTGTATGAAAGTATGAACAAGTATCAAACCAAACTTGT----AGCCGGGACAGGCAC 327 * * * * ** consensus_9261#0 GAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGA 1496 consensus_9261#3 GAATCTAGGGGCGCAGTTCAAAAAAGAGCAAGAAGACACAGTTTCAGGTACGATGCATGA 117 consensus_9261#1 CCAATTGCGCTTTATTTTTGACACAATTTCGGTAGGTCCGGTATCGCAGTCAGTTGGTTT 827 consensus_9261#2 TGGTGCAGCGGTGTTGACGGAACAAGTC---GATCCCTTAGGCAAAAATACACAAGATGA 384 * * * * * * consensus_9261#0 AAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGA---GCCACATTAAAA 1553 consensus_9261#3 AAAAGCATGAACTTATAAAAATATGAATCGTACCTCTTACCAAGA---GCCACATTAAAA 174 consensus_9261#1 TTAA-CTTACGCCTCAAAACACACGAAACGGTCGAACGGGGGGGTCGCGCCTCCTTTTCT 886 consensus_9261#2 AAGG-AAGAAACCGACAGCAGTCGGAA--GTATTACCCGTGAAGT---CGCATCGAACAG 438 * * *** * * * consensus_9261#0 CAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAAT----TATTACTCTTCA 1609 consensus_9261#3 CAGTGTAAAATGGGGATGTGCGCAAACAACAACAATAGGGGAAT----TATTACTCTTCA 230 consensus_9261#1 CATTGTGACATAGGGAAAGGGGCGAAGATTTGCATGAGGG--------CACCAGGGTTTA 938 consensus_9261#2 CAACGATAATGGGCAGTATACGGATGCAATGAAATTAGACCCATCCCGCATAGAGATTGA 498 ** * * * * * * ** * ** * consensus_9261#0 GTTAATATAACTTTTTTTTGTTGAATATTTACAATATCA-AAACGCGCATTGTGCTTTCG 1668 consensus_9261#3 GTTAATATAACTTTTTTTTGTTGAATATTTACAATATCA-AAACGCGCATTGTGCCTTCG 289 consensus_9261#1 CT--ACAGGGCCTACTACTGAGAGAGAT----GAGATCA-AGATTAGATCTTCGTCTTCG 991 consensus_9261#2 AAGCGTTTTAGCGAATGCTATTAAA-ATAGAAAACTTTACAGAAGAGGACAGTGTCTTCA 557 * * * ** * * * * * * * *** consensus_9261#0 CT---GATCGTGTGTCGTTGGACGCTAAGCA-TTAGCGCGCAGCCTCCTCTTCCGTCAAA 1724 consensus_9261#3 CT---GATCGTGTGTCGTTGGACGCTAAGCA-TTAGCGCGCAGCCTCCTCTTCCGTCAAA 345 consensus_9261#1 CCTA-GGTTTCGTCCCGCAGCA-GATATACC-TCTGTGTGTA-TCTGGTAGCCTGTTTGT 1047 consensus_9261#2 ATGAAGAAAGCATCCCGCTTGATACAATACGGTTACCAAAGAGAAAATATTTCGGGGATA 617 * * ** * * * * * * * consensus_9261#0 CAAAGAGGTCAAACATCTGCCCT-CCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGA 1783 consensus_9261#3 CAAAGAGGTCAAACATCTGCCCT-CCCCCCCGGAACACATTAGTTAGTACCGCAGCCAGA 404 consensus_9261#1 GTGTGTATGTATGTGTGTATGTAACTCTTTTCGTACAGTTGGCTTTTTTGGGTAGGCACA 1107 consensus_9261#2 AAGAGTTGGAAGACGATTCCAGTATTACATCAAAAT-CGCAAGACTCTAACGATGCTTGG 676 * * * * * * * consensus_9261#0 AGAATGTAACAAACAAATAGACAAACAA-ATATTGAGCTGAAGGGCAAACAAAAAATAAA 1842 consensus_9261#3 AGAATGTAACAAACAAATAGACAAACAA-ATATTGAGCTGAAGGGC-------------- 449 consensus_9261#1 TTT-TATGATGAACGCATTAAAATTCAATGTATCGCTCTACGCACTCNAT---------- 1156 consensus_9261#2 ------------------------------------------------------------ consensus_9261#0 CAGCTGGATAAGCATTAGGAAGA 1865 consensus_9261#3 ----------------------- consensus_9261#1 ----------------------- consensus_9261#2 ----------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||