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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9267#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1294 fasta sequence
[CCGCGGACGCGTGGGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAGAGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTGAAGCTTACTTTATCAACGAGAAGCTTCGCCAGCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGCCTTTGTGCGCGTAGATTATCTCTCGAATGCTGAGGCGGCAAAGCGCGGCCTCGACGGTACCACGCGCAAGAACCGTGTGCTACGCGTGCGATTTGCCCCGAATGCAACAGCGATCCGCGTCAAGAATCTGACACCGTACGTCACGAACGAGCTGCTGTACAAAGCGTTTGAAGTGTTCGGTCCGCTCGAGCGAGCCGTCGTGCAGGTGGACGAGCGTGGTAAACCGACCGGCGAGGGCATTGTGGAGTTTAAGAACAAGCCCGGCGCAATGGCCGCTATACGATACTGTACGGAGAAATGCTATTTCCTGACCGCGTCACTGCGGCCAGTCATCGTGGAGCCGTACACGTACCAGGATGACAACGATGGGCTGCCGGAAAAGTCGCTCAACAAGAAGCAAAACGATTTCTTGAAGGCACGCCAGCAAGGGCCGCGCTTTGCCGAGCACGGTTCGTTCGAGTTCGAGTATGGCCAACGCTGGAAGCACATGCACGAACTGTTCAAGCAGAAGGCCGAATCGTTGAAGCGCGAGATGATCAT-GGAGGAGG-AAAAGCTCGAAGCACAGATGGAATACGCTCGATACGAGCAGGAAACAGAGTTGCTGCGAGAGCAACTGCGCCAACGCGAAATGGACCGCGATCGTCAGAAGGCTGAGTGGGAAATGAAGGAGCGCCAGGTGCAGGAGGCCCGTCAACGCAATGACATTCAGATTAAAACGGAACTCGAAGAAATGACTACCCGTATCAAACGATCGGATGAAGAATTGCATCGCCGACAAAAAGAAAACAACATGTTCATGCAGAATCGCCAGATGAACATCATCGATCCGCAGCAGCAAATGAACGATATGGGTGGTATGGGTAGTGGTGGTGAT]
[+] EMBL BM608041 [CCGCGGACGCGTGGGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAGAGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTGAAGCTTACTTTATCAACGAGAAGCTTCGCCAGCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGCCTTTGTGCGCGTAGATTATCTCTCGAATGCTGAGGCGGCAAAGCGCGGCCTCGACGGTACCACGCGCAAGAACCGTGTGCTACGCGTGCGATTTGCCCCGAATGCAACAGCGATCCGCGTCAAGAATCTGACACCGTACGTCACGAACGAGCTGCTGTACAAAGCGTTTGAAGTGTTCGGTCCGCTCGAGCGAGCCGTC ]
[+] EMBL BM648682 [ cCGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGCCTTTGTGCGCGTAGATTATCTCTCGAATGCTGAGGCGGCAAAGCGCGGCCTCGACGGTACCACGCGCAAGAACCGTGTGCTACGCGTGCGATTTGCCCCGAATGCAACAGCGATCCGCGTCAAGAATCTGACACCGTACGTCACGAACGAGCTGCTGTACAAAGCGTTTGAAGTGTTCGGTCCGCTCGAGCGAGCCGTCGTGCAGGTGGACGAGCGTGGTAAACCGACCGGCGAGGGCATTGTGGAGTTTAAGAACAAGCCCGGCGCAATGGCCGCTATACGATACTGTACGGAGAAATGCTATTTCC GACCGCGTCACTGCGGCCAGTCATCGTGGAGCCGTACACGTACCAGGATGACAACGATGGGCTGCCGGAAAAGTCGCTCAACAAGAAGCAAAACGATTTCTTGAAGGCACGCCAGCAAGGGCCGCGCTTTGCCGAGCACGGTTCGTTCGAGTTCGAGTATGGCCAACGCTGGAAGCACATGCACGAACTGTTCAAGCAGAAGGCCGAATCGTTGAAGCGCGAAATGATCATGGGAGCAGGAAAAAGCTCGAAGCACAGATGGAATACGCTCGATACGAGCAGGAAACAGAGTTGCTGC ]
[+] EMBL BM653435 [ ccgCACGCGCAAGAACCGTGTGCTACGCGTGCGATTCGCCCCGAATGCAACAGCGATCCGCGTCAAGAATCTGACACCGTACGTCACGAACGAGCTGCTGTACAAAGCGTTCGAAGTGTTCGGTCCGCTCGAGCGAGCCGTCGTACAGGTGGATGAGCGTGGTAAACCGACCGGCGAGGGCATTGTGGAGTTTAAGAACAAGCCCGGCGCGATGGCTGCCATACGATACTGTACGGAGAAATGCTATTTCCTGACCGCGTCATTGCGGCCAGTCATCGTGGAGCCGTACACGTACCAGGATGACAACGATGGGCTGCCGGAAAAGTCGCTCAACAAGAAGCAAAACGACTTCTTGAAGGCACGCCAGCAAGGGCCGCGCTTTGCCGAGCACGGTTCGTTCGAGTTCGAGTATGGCCAACGCTGGAAGCACATGCACGAACTGTTCAAGCAGAAGGCCGAATCGTTGAAGCGCGAGATGATCAT GGAGGAGG AAAAGCTCGAAGCACAGATGGAATACGCTCGATACGAGCAGGAAACAGAGTTGCTGCGAGAGCAACTGCGCCAACGCGAAATGGACCGCGATCGTCAGAAGGCTGAGTGGGAAATGAAGGAGCGCCAGGTGCAGGAGGCCCGTCAACGCAATGACATTCAGATTAAAACGGAACTCGAAGAAATGACTACCCGTATCAAACG ]
[+] EMBL BX616086 [ GAGCCGTCGTGCAGGTGGACGAGCGTGGTAAACCGACCGGCGAGGGCATTGTGGAGTTTAAGAACAAGCCCGGCGCAATGGCCGCTATACGATACTGTACGGAGAAATGCTATTTCCTGACCGCGTCACTGCGGCCAGTCATCGTGGAGCCGTACACGTACCAGGATGACAACGATGGGCTGCCGGAAAAGTCGCTCAACAAGAAGCAAAACGATTTCTTGAAGGCACGCCAGCAAGGGCCGCGCTTTGCCGAGCACGGTTCGTTCGAGTTCGAGTATGGCCAACGCTGGAAGCACATGCACGAACTGTTCAAGCAGAAGGCCGAATCGTTGAAGCGCGAGATGATCAT GGAGGAGG AAAAGCTCGAAGCACAGATGGAATACGCTCGATACGAGCAGGAAACAGAGTTGCTGCGAGAGCAACTGCGCCAACGCGAAATGGACCGCGATCGTCAGAAGGCTGAGTGGGAAATGAAGGAGCGCCAGGTGCAGGAGGCCCGTCAACGCAATGACATTCAGATTAAAACGGAACTCGAGGAAATGACTACCCGTATCAAACGATCGGATGAAGAATTGCATCGCCGACAAAAAGAAAACAACATGTTCATGCAGAATCGCCAGATGAACATCATCGATCCGCAGCAGCAAATGAACGATATGGGTGGTATGGGTAGTGGTGGTGAT]
consensusID : consensus_9267#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 871 fasta sequence
[CCGCCCACGCGTCCGCTTTTTCTTTGGTGTTCGTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA-GCGTCCACAGCA-GCAAC--CGCATGGTGGT-GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCC---------GGCGGACCA----G-----GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT---GGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAG-AGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTG-AAGCTTACTTTATCAACGAGAAGCTTCGCCAGCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCAT]
[+] EMBL BM615580 [CCGCCCACGCGTCCGCTTTTTCTTTGGTGTTCGTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAGTTTGAGAATTACATAATTTGGGATTGTGTATCGGTGTTTTAAAGCTTCCCGAACGTAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGGGGTGGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGTCCGGGCGGACCGGGTGGACCC GGCGGACCATGCGGACCATGCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGTGGCGGCGGCGGTGGCAATCCCA ]
[+] EMBL BM579550 [ ccgcTCGTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGTGGT GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCC GGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAG AGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTG AAGCTTACTTT ]
[+] EMBL BM593520 [ ccgGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGTGGT GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCC GGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAG AGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTGAAAGCTTACTTTATCAACGAGAAGCTTCGCCAGCTGGCCGGACCG ]
[+] EMBL BM583262 [ ccgGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGTGGTGGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCC GGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAGAAGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTG AAGCTTACTTTATCAACGAG ]
[+] EMBL BM605321 [ cCGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTGGGATTGTGTATCGGTGTTTTAAAGCTTCCCGAACGTAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGTGGT GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCCGGCGGACCAGGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAATAA ]
[+] EMBL BM585488 [ ccgGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCA GCGTCCACAGCA GCAAC CGCATGGTGGT GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCCGGCGGACCAGGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAA ]
[+] EMBL BM601263 [ ccGCC CACGCGTCCGC CCACGCGTCCGCGCATGGTGGT GGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCC GGCGGACCA G GCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGAATCGCAATCGCGGTCCGGGTGGTAATGCTGGT GGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAG AGGATTTCGGTCCCAATCAGCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTG AAGCTTACTTTATCAACGAGAAGCTTCGCCAGCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCAT]
consensusID : consensus_9267#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 865 fasta sequence
[GTGAACCAAACGCAATCCCGTGCCAAGGAGCAGTCGGAGCAGCAGTCGAAGGACGATCAGCAGCAGCAGCAGCAGGCAGGCGTCGGGGCCGGCACTCGGGGTCAGCAGGAGCTTAACTCACTGGACGAAATAACGAACAAGGTGTTCGACGAGCTGAGGAATGGCAAAACGGCATTCGGTGGTGTCGTGACGGCAGTTGGAAAGGGGCCCGGCACCGTGGATGTAGATTGCGCGTCCGATACTTCATCGACGCGGCGCGATCGATTCCGCAGGCGCGGCTCCAACGCAGCACCGTCGGAGAGTGGGCGCGGGGCGAAAAGTAAAAAATGCTCCACCGGCGGCTCGGAGGACGGTGGTGAGAGTGTGAACAATCTCGGCATCAAGAAGCCAATCATCGCGAAACTGAAGGCGGGTGTGAAGCTGCAGATACCGACACGCTCCCAGAACGATGAGCTGCTGGAGGGTCTGAAGCGAGCCCAACGGAGCCGGCTGGAGGATCAGCGGGGCACGGAAATCAATTTCGAGCTGCCCGACTTTCTGAAGGACAAGGAAAACTTTTCCACTAGCTCCGCCGCGGTTAGTAGCAGTGCGGGATCGATTGGCCCCTCGGCAGCACCCTCGTCGGCGGCAGGCCCTTCCAAGCTGACGCGCAGTAAGCCGGCCCGCCGCTCGGAGGCTACCACCCCGACGGCGGAGTTTGTAGGCGGTTCGTTGCAGCAAATCAACAAGCCCCAGCCAGCGCCGCGGTTATCGATCACCGGTCAGCAGGGACGCCAGAACCTGTCCGGGCCGGGATCGCCCGTCCATGCGGCCGTCAGCGATAGCCATCTGAATCTGTCCACCCAGTGCAATGCTTCGCCCCTGC]
[+] EMBL AGA282063 [GTGAACCAAACGCAATCCCGTGCCAAGGAGCAGTCGGAGCAGCAGTCGAAGGACGATCAGCAGCAGCAGCAGCAGGCAGGCGTCGGGGCCGGCACTCGGGGTCAGCAGGAGCTTAACTCACTGGACGAAATAACGAACAAGGTGTTCGACGAGCTGAGGAATGGCAAAACGGCATTCGGTGGTGTCGTGACGGCAGTTGGAAAGGGGCCCGGCACCGTGGATGTAGATTGCGCGTCCGATACTTCATCGACGCGGCGCGATCGATTCCGCAGGCGCGGCTCCAACGCAGCACCGTCGGAGAGTGGGCGCGGGGCGAAAAGTAAAAAATGCTCCACCGGCGGCTCGGAGGACGGTGGTGAGAGTGTGAACAATCTCGGCATCAAGAAGCCAATCATCGCGAAACTGAAGGCGGGTGTGAAGCTGCAGATACCGACACGCTCCCAGAACGATGAGCTGCTGGAGGGTCTGAAGCGAGCCC ]
[+] EMBL BX602402 [ TCATCGACGCGGCGCGATCGATTCCGCAGGCGCGGCTCCAACGCAGCACCGTCGGAGAGTGGGCGCGGGGCGAAAAGTAAAAAATGCTCCACCGGCGGCTCGGAGGACGGTGGTGAGAGTGTGAACAATCTCGGCATCAAGAAGCCAATCATCGCGAAACTGAAGGCGGGTGTGAAGCTGCAGATACCGACACGCTCCCAGAACGATGAGCTGCTGGAGGGTCTGAAGCGAGCCCAACGGAGCCGGCTGGAGGATCAGCGGGGCACGGAAATCAATTTCGAGCTGCCCGACTTTCTGAAGGACAAGGAAAACTTTTCCACTAGCTCCGCCGCGGTTAGTAGCAGTGCGGGATCGATTGGCCCCTCGGCAGCACCCTCGTCGGCGGCAGGCCCTTCCAAGCTGACGCGCAGTAAGCCGGCCCGCCGCTCGGAGGCTACCACCCCGACGGCGGAGTTTGTAGGCGGTTCGTTGCAGCAAATCAACAAGCCCCAGCCAGCGCCGCGGTTATCGATCACCGGTCAGCAGGGACGCCAGAACCTGTCCGGGCCGGGATCGCCCGTCCATGCGGCCGTCAGCGATAGCCATCTGAATCTGTCCACCCAGTGCAATGCTTCGCCCCTGC]
consensusID : consensus_9267#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 659 fasta sequence
[CCGCGGACGCGTGGGGTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTGGGATTGTGTATCGGTGTTTTAAAGCTTCCCGAACGTAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCAACCGCATGGTGGTGGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCCGGCGGACCAGGCGGACCAGGCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTGTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGCCTTTGTGCGCGTAGATTATCTCTCGAAATGCTGAGGCGGCAAAGCGC]
[+] EMBL BM611695 [CCGCGGACGCGTGGGGTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTGGGATTGTGTATCGGTGTTTTAAAGCTTCCCGAACGTAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCAACCGCATGGTGGTGGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGGTGGACCCGGCGGACCAGGCGGACCAGGCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACATGAACAGAAATAATCGCAACAATAGCAAGAATCGCCAGAGCATGCCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTGTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGCCTTTGTGCGCGTAGATTATCTCTCGAAATGCTGAGGCGGCAAAGCGC]
consensusID : consensus_9267#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 489 fasta sequence
[GTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCAACCGCATGGTGGTGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGCTGGACCCAGCGATAGCCATCTGAATCTGTCCACCCAGTGCAATGCTTCGCCCCTGCCGCAGGACGATCCATTCCACGTGCACGGGGGCGGCAGCGGCACTAATGGCGGTTCGCAGTCCGAAACTAGCTATGCCGACACTACCCTAGTCTTCACCCATGCCCGACCTTACAAT]
[+] EMBL BM642267 [GTGGGAAACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATCGATTGGTGTGAGCAAGTGAGTGGCTGACAGTGAAGTGTAATTTGAGAATTACATAATTTTGGATTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAAAAGAAACAAGCGAAAATGGATGTTGCTGTGAAGCAAGAAATTAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCAACCGCATGGTGGTGGTGGTGGGGGTCCCGGCCCTATGCAAGGCAATAATCAAGCTGGGCCCGATCAGCACGGCCCAGGCGGCCCGGGCGGACCGGCTGGACCCAGCGATAGCCATCTGAATCTGTCCACCCAGTGCAATGCTTCGCCCCTGCCGCAGGACGATCCATTCCACGTGCACGGGGGCGGCAGCGGCACTAATGGCGGTTCGCAGTCCGAAACTAGCTATGCCGACACTACCCTAGTCTTCACCCATGCCCGACCTTACAAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9267#3 ------------------------------------------------------------
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 ------------------------------------------------------------
consensus_9267#0 CCGCGGACGCGTGGGCGGCGGTGGCAATCCCAACAATAACGGTGGTCCCGGAAACAATCG 60
consensus_9267#2 ------------------------------------------------------------
consensus_9267#3 ------------------------------------------------------------
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 ------------------------------------------------------------
consensus_9267#0 TCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAGAGGATTTCGGTCCCAATCA 120
consensus_9267#2 ------------------------------------------------------------
consensus_9267#3 ------------------------------------------------------------
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 ------------------------------------------------------------
consensus_9267#0 GCACCAGAACCGGGGTGGCATGCATCGGGGCAACAACCGCGGAGGAAATGATATGGATAA 180
consensus_9267#2 ------------------------------------------------------------
consensus_9267#3 ------------------------------------------------------------
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 ------------------------------------------------------------
consensus_9267#0 CAGTTTCGGCGACCGTCGGCGTGGCGGTGAAGCTTACTTTATCAACGAGAAGCTTCGCCA 240
consensus_9267#2 ------------------------------------------------------------
consensus_9267#3 --------------------------------------------------CCGCGGACGC 10
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 ---------------------------------CCGCCCACGCGTCCGCTTTTTCTTTGG 27
consensus_9267#0 GCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAGGATGTGAAATTTTCTGG 300
consensus_9267#2 ------------------------------------------------------------
consensus_9267#3 GTGGGGTGGGAA--ACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATC-GATTGG 67
consensus_9267#4 -----GTGGGAA--ACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATC-GATTGG 52
consensus_9267#1 TGTTCGTGGGAA--ACGGAAGCAAGTTGTTCGCTCATCGTGCGGTCGCTGATC-GATTGG 84
consensus_9267#0 CCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGA 360
consensus_9267#2 -------GTGAA--CCAAACGCAATCCCGT--GCCAAGGAGCAGTCG--GAGC--AGCAG 45
* * **** * * * * ** *
consensus_9267#3 TGTGAGCAA-GTGAGTGGCTGA--CAGTGAAGTGTAATTTGAGAATTACATAATTTGGGA 124
consensus_9267#4 TGTGAGCAA-GTGAGTGGCTGA--CAGTGAAGTGTAATTTGAGAATTACATAATTTTGGA 109
consensus_9267#1 TGTGAGCAA-GTGAGTGGCTGA--CAGTGAAGTGTAATTTGAGAATTACATAATTTTGGA 141
consensus_9267#0 TATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCATGAACAAGGAGAAAAATTACGC 420
consensus_9267#2 TCGAAGGACGATCAGCAGCAGCAGCAGC-AGGCAGGCGTCGGGGCCGGCAC---TCGGGG 101
* * * ** *** * * * * * *
consensus_9267#3 TTGTGTATCGGTGTTTTAAAGCTTCCCGAACGTAA-AAGAAACAA-GCGAAAA-TGGATG 181
consensus_9267#4 TTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAA-AAGAAACAA-GCGAAAA-TGGATG 166
consensus_9267#1 TTGTGTATCGGTGTTTAAAAGCTTCCCGAACGCAA-AAGAAACAA-GCGAAAA-TGGATG 198
consensus_9267#0 CTTTGTGCGCGTAGATTA---TCTCTCGAATGCTG-AGGCGGCAAAGCGCGGCCTCGACG 476
consensus_9267#2 TCA---GCAGGAGCTTAA---CTCACTGGACGAAATAACGAACAAGGTGT----TCGACG 151
* * * * * * * *** * * * ** *
consensus_9267#3 TTGCTGTGAAGCAAGAAAT-----TAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCA 236
consensus_9267#4 TTGCTGTGAAGCAAGAAAT-----TAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCA 221
consensus_9267#1 TTGCTGTGAAGCAAGAAAT-----TAATGGGTCCCCGTTGCCGCAGCGTCCACAGCAGCA 253
consensus_9267#0 GTACCACGC-GCAAGAACCGTGTGCTACGCGTGCGATTTGCCCCGAATGCAACAGCGATC 535
consensus_9267#2 A-GCTGAGGAATGGCAAAACGGCATTCGGTGGTGTCGTGACGGCAGTTGGAAAGGGGCCC 210
* * ** * * * * * * *
consensus_9267#3 ACCGC-ATGGTGGTGGGTGGTGGGGGTCCCGGCC------CTATGCAAGGCAATAATCAA 289
consensus_9267#4 ACCGC-ATGGTGGTGG-TGGTGGGGGTCCCGGCC------CTATGCAAGGCAATAATCAA 273
consensus_9267#1 ACCGC-ATGGTGGTGG-TGGTGGGGGTCCCGGCC------CTATGCAAGGCAATAATCAA 305
consensus_9267#0 CGCGT-CAAGAATCTGACACCGTACGTCACGAACGAGCTGCTGTACAAAGCGTTTGAAGT 594
consensus_9267#2 GGCACCGTGGATGTAG--ATTGCGCGTCCGATAC------TTCATCGACGCGG----CGC 258
* * * * *** * * * * **
consensus_9267#3 GCTGGGCCCGATCAGCACGGCCCAGGCG--GCCCGGGCGGACCGGGTGGACC---CGGCG 344
consensus_9267#4 GCTGGGCCCGATCAGCACGGCCCAGGCG--GCCCGGGCGGACCGGCTGGACC---CAGCG 328
consensus_9267#1 GCTGGGCCCGATCAGCACGGCCCAGGCG--GCCCGGGCGGACCGGGTGGACC---CGGCG 360
consensus_9267#0 GTTCGGTCCGCTCGAGCGAGCCGTCGTGC-AGGTGGACGAGCGTGGTAAACCGACCGGCG 653
consensus_9267#2 GATCGATTCCGCAGGCGCGGCTCCAACGCAGCACCGTCGGAGAGTGGGCGCGGGGCGAAA 318
* * * * ** * * ** * *
consensus_9267#3 G--ACCAGGCGGACCA----GGCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACA 398
consensus_9267#4 ATAGCCATCTGAATCT----GTCCACCCAG-TGCAATGCTTCGCCCCTGCCGCAGGACGA 383
consensus_9267#1 G-----------ACCA----GGCGGCCCGGGTGGACCGGGTGGACCGGGAAACAAGAACA 405
consensus_9267#0 AGGGCATTGTGGAGTTTAAGAACAAGCCCGGCGCAATGGCCGCTATACGATACTGTACGG 713
consensus_9267#2 AGTAAAAAATGCTCCAC--CGGCGGCTCGGAGGACGGTGGTGAGAGTGTGAACAATCTCG 376
* * * * *
consensus_9267#3 TGAACAGAAA-----TAATCGCAACAATAGCAAGAATCGCCA--GAGCATGCCGCTGTTC 451
consensus_9267#4 TCCATTCCA------CGTGCACGGGGGCGGCAGCGGCACTAA--TGGCGGTTCGCAGTCC 435
consensus_9267#1 TGAACAGAAA-----TAATCGCAACAATAGCAAGAATCGCCA--GAGCATGCCGAATCGC 458
consensus_9267#0 AGAAATGCTATTTCCTGACCGCGTCACTGCGGCCAGTCATCGTGGAGCCGTACACGTACC 773
consensus_9267#2 GCATCAAGAAGCCAATCATCGCGAAACTGAAGGCGGGTGTGAAGCTGCAGATACCGACAC 436
* * ** *
consensus_9267#3 GAAATTCCACCGA-TCGAGGCACAGGATGTGAAATTTTCTGGCCGCAATCGGCTGTACGT 510
consensus_9267#4 GAAACT--AGCTA-TGCCGACAC----TACCCTAGTCTTCACCCATGCCCGACCTTACAA 488
consensus_9267#1 AATCGCGGTCCGGGTGGTAATGCTGGTGGCGGCGGTGGCAATCCCAACAATAACGGTGGT 518
consensus_9267#0 AGGATGACAACGATGGGCTGCCGGAAAAGTCGCTCAACAAGAAGCAAAACGATTTCTTGA 833
consensus_9267#2 GCTCCCAGAACGATGAGCTGCTGG---AGGGTCTGAAGCGAGCCCAACGGAGCCGGCTGG 493
*
consensus_9267#3 CGGCAACCTGACCAACGATGTGACGGAGGAAGAGCTGGTTGATATGTTCAAAGTGTACGG 570
consensus_9267#4 T----------------------------------------------------------- 489
consensus_9267#1 CCCGGAAACAATCGTCCCGGCAACAATGGAGGAAACCCTCAACAAATGGGAGGAGAGGAT 578
consensus_9267#0 AGGCACGCCAGCAAGGGCCGCGCTTTGCCGAGCACGGTTCGTTCGAGTTCGAGTATG-GC 892
consensus_9267#2 AGGATCAGCGG--GGCACGGAAATCAATTTCGAGCTGCCCGACTTTCTGAAGGACAAGGA 551
consensus_9267#3 CGAGATCAGCGAAGTGTTCATGAACAAG--GAGAAAA--ATTACGCCTTTGTGCGCGTAG 626
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 TTCGGTCCCAATCAGCACCAGAACCGGG--GTGGCATGCATCGGGGCAACAACCGCGGAG 636
consensus_9267#0 CAACGCTGGAAGCACATGCACGAACTGTTCAAGCAGAAGGCCGAATCGTTGAAGCGCGAG 952
consensus_9267#2 AAACTTTTCCACTAGCTCCGCCG-CGGTTAGTAGCAG-TGCGGGATCGATTGGCCCCTCG 609
consensus_9267#3 ATTATCTCTC-GAAATGCTGAGGCGGCAAAGCGC-------------------------- 659
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 GAAATGATAT-GGATAACAGTTTCGGCGACCGTCGGCGTGGCGGTGAAGCTTACTTTATC 695
consensus_9267#0 ATGATCATGGAGGAGGAAAAGCTCGAAGCACAGATGGAATACGCTCGATACGAGCAGGAA 1012
consensus_9267#2 GCAGCACCCT--CGTCGGCGGCAGGCCCTTCCAAGCTGACGCGCAGTAAGCCGGCCCGCC 667
consensus_9267#3 ------------------------------------------------------------
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 AACGAGAAGCTTCGCCAGCTGGCCGGACCGCTGTTCGAAATTCCACCGATCGAGGCACAG 755
consensus_9267#0 ACAGAGTTGCTGCGAGAGCAACTGCGCCAACGCGAAATGGACCGCGATCGTCAGAAGGCT 1072
consensus_9267#2 GCTCGGAGGCTACCACCCCGACGGCGGAGTTTGTAGGCGGTTCGTTGCAGCAAATCAACA 727
consensus_9267#3 ------------------------------------------------------------
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 GATGTGAAATTTTCTGGCCGCAATCGGCTCTACGTCGGCAACCTGACCAACGATGTGACG 815
consensus_9267#0 GAGTGGGAAATGAAGGAGCGCCAGGTGCAGGAGGCCCGTCAACGCAATGACATTCAGATT 1132
consensus_9267#2 AGCCCCAGCCAGCGCCGCGGTTATCGATCACCGGTCAGCAGGGACGCCAGAACCTGTCCG 787
consensus_9267#3 ------------------------------------------------------------
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 GAGGAAGA--GCTGGTTGATATGTTCAAAGTGTACGGCGAGATCAGCGAAGTGTTCAT-- 871
consensus_9267#0 AAAACGGA--ACTCGAAGAAATGACTACCCGTATCAAACGATCGGATGAAGAATTGCATC 1190
consensus_9267#2 GGCCGGGATCGCCCGTCCATGCGGCCGTCAGCGATAGCCATCTGAATCTGTCCACCCAGT 847
consensus_9267#3 ------------------------------------------------------------
consensus_9267#4 ------------------------------------------------------------
consensus_9267#1 ------------------------------------------------------------
consensus_9267#0 GCCGACAAAAAGAAAACAACATGTTCATGCAGAATCGCCAGATGAACATCATCGATCCGC 1250
consensus_9267#2 GCAATGCTTCGCCCCTGC------------------------------------------ 865
consensus_9267#3 --------------------------------------------
consensus_9267#4 --------------------------------------------
consensus_9267#1 --------------------------------------------
consensus_9267#0 AGCAGCAAATGAACGATATGGGTGGTATGGGTAGTGGTGGTGAT 1294
consensus_9267#2 --------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||