cluster # 9282

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Anopheles gambiae
cluster # 9282 cluster # 9282 Sequences # 15 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9282#0 length = 1931 sequences # 13

consensus_9282#1 length = 404 sequences # 1
consensus_9282#2 length = 345 sequences # 1

consensusID : consensus_9282#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1931
fasta sequence

                              [CCGGTCGAAGTAGAAAAACATTCCCTTCGCCAGATTTT-CTCCG-GTGCAGTTGGTATTGTTGTGTTTTAAGTTAGTTTCTATATTTTAACTTTCCCAAGGGCTAGGTGCACTGCGCAGCAAGCAGAATGAGTGCACCATCGAACTCGAAGAGCGCCACTGGCCAACCGGGAGCTTCGGGTTCGAGCGCGCCCACTACGGTGCAGGAGTTTGTGATTCGTGTGCCGAAGAATCTGAAAAAGAAGTATCACGTCATGCGGTTCAACGCGACGCTCAACGTCGACTTTACCCAGTGGCGGACGGTGAAGATGGAGCGCGAAAACAACCAGAAGGAGTACAAGGGCATCGAGGAGGTGATGCCCAAGTTCGGTGCCGGCTCGGAGTTCAATCGGGATCTGCGCGAGGAGGCACGCCGGAAGCGGTTCGGTATTATTTCGAAAAAGTACAAGCCCGAAGCGCAGCCCTGGATTTTGCGTGCCGGTGGCAAGAGCGGCAAAATGTTCCGTGGCATCCGGGAGGGTGGCGTGGGCGAGAATGCTGCGTTTTACGTGTTTACACACGCACCGGACGGGGCGATCGAGGCGTATCCGCTGAACGAGTGGTACAACTTTCAGCCCATCAACCGATACAAAGCACTGTCCGCGGAGGAAGCGGAGCAGGAGTA-CGGGCGGCGCAAGAAGACGATGAACTACTTCTCGCTCATGTTCCGGAAGCGGCTAAAGAANGGCGAGGATAACGAGGCCGACGACCAGGA-GAAACAAAGGGCAAGAAGGGAGAGGGAGGCAAGAGCAAGGATTTGAAGATCAGCGACATGGACGAGTGGATCGACTCGGATGAGGTGTCGTCGTCGGGCGACGATGACGATGAGGGCAAGTCGAAGCAGAAGGACAGCGACGACGATGCGAAGGATAAGAAGGCGAAGAACAAAAAGAAGGCACTGGCGGACAGCAAGAAGAAGAAGCGGGACGTGGACGAGGAAGCGTTCGAAGAGTCGGACGATGGTGATGAGGAGGGGCGCGAGCTGGACTACATCTCGGACTCGAGCGACAGCGAG-TCGGACCACGACGCAAAGGTGGTGAAGGAGATGAAGTCCGTTGCGGAGGAAGACGCACTGCGGAAGCTGCTGACCTCGGACGAAGATTCGGAGGAGGAGGAAAAGAAATCGGAGGAGGATGAGGAAAAGGAGGACGAGAAGAATGGCAAATCGAAGGAGAAGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGACGACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCTAAAAAGGTTAAGACGGAAATTACGCCATCCCTTCCGCCCACGTTCGCTGGCATCGTTAATGCCACAAGCAAAGATGATTATGGCATAACCGAGGAAGCGGTCCGGCGGTACTTGATGCGCAAACCGATGACCACGACGGAACTACTGACCAAGTTCAAGAACAAGAAGACGGGTGTGTCGAGTGAGAAGCTGGTCGAAACCATGACCCAAATACTGAAACGCATCAATCCGGTCAAACAGACCATACAGGGCAAAATGTATCTCAGCATAAAGGTGCCGAAATGAGCGCAAAAAAGATTAACATTGAGGACTGGCGAAACGCATCGTAAGCACTAGCAGTAATTTTAAAGCAGGAAATTTAAACNAATAAACTTTTGGN]

[+] EMBL BM599819             [CCGGTCGAAGTAGAAAAACATTCCCTTCGCCAGATTTTGCTTCGTGTGCAGTTGGTATAGTTGTGTTTTAAGTTAGTTTCTATATTTTAACTTTCCCAAGGGCTAGGTGCACTGCGCAGCAAGCAGAATGAGTGCACCATCGAACTCGAAGAGCGCCACTGGCCAACCGGGAGCTTCGGGTTCGAGTGCACCCACTACGGTGCAGGAGTTTGTGATTCGTGTGCCGAAGAATCTGAAAAAGAAGTATCACGTCATGCGGTTCAACGCGACGCTCAACGTCGACTTTACCCAGTGGCGGACGGTGAAGATGGAGCGCGAAAACAACCAGAAGGAGTACAAGGGCATCGAGGAGGTGATGCCCAAGTTCGGTGCCGGCTCGGAGTTCAATCGGGATCTGCGCGAGGAGGCACGCCGCAAGCGGTTCGGTATTATTTCGAAAAAGTACAAACCCGAAGCGCAGCCCTGGATTTTGCGTGCCGGTGGCAAGAGCGGCAAAATGTTCCGTGGCATCCGGGAGGGTGGCGTGGGCGAGAATGCTGCGTTTTACGTGTTTACACACGCACCGGACGGGGCGATCGAGGCGTATCCGCTGAACGAGTGGTACAACTTTCAGCCCATCAACCGATACAAAGCACTGTCCGCGGAAGAAGCGGAGCAGGAGTACCGGGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AL933335             [                        aaTCCCCCGAGGTT ATCGT GTGCAGTTGGTATTGTTGTGTTTTAAGTTAGTTTCTATATTTTAACTTTCCCAAGGGCTAGGTGCACTGCGCAGCAAGCAGAATGAGTGCACCATCGAACTCGAAGAGCGCCACTGGCCAACCGGGAGCTTCGGGTTCGAGCGCGCCCACTACGGTGCAGGAGTTTGTGATTCGTGTGCCGAAGAATCTGAAAAAGAAGTATCACGTCATGCGGTTCAACGCGACGCTCAACGTCGACTTTACCCAGTGGCGGACGGTGAAGATGGAGCGCGAAAACAACCAGAAGGAGTACAAGGGCATCGAGGAGGTGATGCCCAAGTTCGGTGCCGGCTCGGAGTTCAATCGGGATCTGCGCGAGGAGGCACGCCGGAAGCGGTTCGGTATTATTTCGAAAAAGTACAAGCCCGAAGCGCAGCCCTGGATTTTGCGTGCCGGTGGCAAGAGCGGCAAAATGTTCCGTGGCATCCGGGAGGGTGGCGTGGGAGAGAATGCTGCGTTTTACGTGTTTACACACGCACCGGACGGGGCGATCGA GCGTATCCGCTGAACGAGTGGTACAACTTTCAGCCGATTAACCGATACAAAGCACTGTCCGCGGAng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM599040             [                                         CCG GTGCAGTTGGTATTGTTGTGTTTTAAGTTAGTTTCAATATTTTAACTTTCCCAAGGCCTAGGTGCACTGCGCAGCAAGCAGAATGAGTGCACCATCGAACTCGAAGAGCGCCACTGGCCAACCGGGAGCTTCGGGTTCGAGCGCGCCCACTACGGTGCAGGAGTTTGTGATTCGTGTGCCGAAGAATTTGAAAAAGAAGTATCACGTCATGCGGTTCAACGCGACGCTCAACGTTGACTTTACCCAGTGGCGGACGGTGAAGATGGAGCGCGAAAACAACCAGAAGGAGTACAAGGGCATCGAGGAGGTGATGCCCAAGTTCGGTGCCGGCTCGGAGTTCAATCGGGATCTGCGCGAGGAGGCACGCCGGAAGCGATTTGGTATAATATCGAAAAAGTACAAGCCCGAAGCGCAGCCCTGGATTTTGCGTGCCGGTGGCAAGAGCGGCAAAATGTTCCGTGGCATCCGGGAGGGTGGCGTGGGCGAGAATGCTGCGTTTTACGTGTTTACACACGCACCGGACGGGGCGATCGAGGCGTATCCGCTGAACGAGTGGTACAACTTTCAGCCCATCAACCGATACAAAGCACTGTCCGCGGAGGAAGCGGAGCAGGAGTA CGGGCGGCGCAAGAAGACGATGAACTACTTCTCGCTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX621142             [                                                                                aATATTTTAACTTTCCCAAGGCCTAGGTGCACTGCGCAGCAAGCAGAATGAGTGCACCATCGAACTCGAAGAGCGCCACTGGCCAACCGGGAGCTTCGGGTTCGAGCGCGCCCACTACGGTGCAGGAGTTTGTGATTCGTGTGCCGAAGAATTTGAAAAAGAAGTATCACGTCATGCGGTTCAACGCGACGCTCAACGTTGACTTTACCCAGTGGCGGACGGTGAAGATGGAGCGCGAAAACAACCAGAAGGAGTACAAGGGCATCGAGGAGGTGATGCCCAAGTTCGGTGCCGGCTCGGAGTTCAATCGGGATCTGCGCGAGGAGGCACGCCGGAAGCGATTTGGTATAATATCGAAAAAGTACAAGCCCGAAGCGCAGCCCTGGATTTTGCGTGCCGGTGGCAAGAGCGGCAAAATGTTCCGTGGCATCCGGGAGGGTGGCGTGGGCGAGAATGCTGCGTTTTACGTGTTTACACACGCACCGGACGGGGCGATCGAGGCGTATCCGCTGAACGAGTGGTACAACTTTCAGCCCATCAACCGATACAAAGCACTGTCCGCGGAGGAAGCGGAGCAGGAGTA CGGGCGGCGCAAGAAGACGATGAACTACTTCTCGCTCATGTTCCGGAAGCGGCTAAAGAANGGCGAGGATAACGAGGCCGACGACCAGGA GGAACca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS09OAU             [                                                                                                                                                         CGCCACTGGCCAACCGGGAGCTTCGGGTTCGAGCGCGCCCACTACGGTGCAGGAGTTTGTGATTCGTGTGCCGAAGAATCTGAAAAAGAAGTATCACGTCATGCGGTTCAACGCGACGCTCAACGTCGACTTTACCCAGTGGCGGACGGTGAAGATGGAGCGCGAAAACAACCAGAAGGAGTACAAGGGCATCGAGGAGGTGATGCCCAAGTTCGGTGCCGGCTCGGAGTTCAATCGGGATCTGCGCGAGGAGGCACGCCGGAAGCGGTTCGGTATTATTTCGAAAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM625655             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccgGCGTTTTACGTGTTTACACACGCACCGGACGGGGCGATCGAGGCGTATCCACTGAACGAGTGGTACAACTTTCAGCCCATCAACCGATACAAAGCACTGTCCGCGGAGGAAGCGGAGCAGGAGTA CGGGCGGCGCAAGAAGACGATGAACTACTTCTCGCTCATGTTCCGGAAGCGGCTAAAGAAGGGCGAGGATAACGAGGCCGACGACCAGGAGGAAACAAAGGGCAAGAAGGGAGAGGGAGGCAAGAGCAAGGATTTGAAGATCAGCGACATGGACGAGTGGATCGACTCGGATGAGGTGTCGTCGTCGGGCGACGATGACGATGAGGGCAAGTCGAAGCAGAAGGACAGCGACGACGATGCGAAGGATAAGAAGGCGAAGAACAAAAAGAAGGCACTGGCGGACAGCAAGAAGAAGAAGCGGGACGTGGACGAGGAAGCGTTCGAAGAGTCGGACGATGGTGATGAGGAGGGGCGCGAGCTGGACTACATCTCGGACTCGAGCGACAGCGAG TCGGACCACGACGCAAAGGTGGTGAAGGAGATGAAGTCCGTTGCGGAGGAAGACGCACTGCGGAAGCTGCTGACCTCGGACGAAGATTCGGAGGAGGAGGAAAAGAAATCGGAGGAGGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS08MKP             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGA GAAACAAAGGGCAAGAAGGGAGAGGGAGGCAAGAGCAAGGATTTGAAGATCAGCGACATGGACGAGTGGATCGACTCGGATGAGGTGTCGTCGTCGGGCGACGGTGACGATGAGGGCAAGTCGAAGCAGAAGGACAGCGACGACGATGCGAAGGATAAGAAGGCGAAGAACAAAAAGAAGGCACTGGCGGACAGCAAGAAGAAGAAGCGGGACGTGGACGAGGAAGCGTTCGAAGAGTCGGACGATGGTGATGAGGAGGGGCGCGAGCTGGACTACATCTCGGACTCGAGCGACAGCACGTTCGGACCACGACGCGAAGGTGGTGAAGGAGATGAAGTCCGTTGCGGAGGAAGACGCACTGCGGAAGCTGCTGACCTCGGACGAAGATTCGGAGGAGGAGGAAAAGAAATCGGAGGAGGATGAGGAAAAGGAGGACGAGAAGAATGGCAAATCGAAGGAGAAGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCCGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCCAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGACGACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCTAAAAAGGTTAAGACGGAAATTACGCCATCCCTTCCGCCCACGTTCGCTGGCATCGTTAATGCCACAAGCAAAGATGATTATGGCATAACCGAGGAAGCGGTCCGGCGGTACTTGATGCGCAAACCGATGACCACGACGGAACTACTGACCAAGTTCAAGAACAAGAAGACGGGTGTGTCGAGTGAGAAGCTGGTCGAAA CATGACCCAAATACTGAAACGCATC                                                                                                                                                          ]
[-] EMBL CNS08MKQ             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGAAAACGCACTGCGGAAGCTGCTGACCTCGGACGAAGATTCGGAGGAGGAGGAAAAGAAATCGGAGGAGGATGAGGAAAAGGAGGACGAGAAGAATGGCAAATCGAAGGAGAAGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCCGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCCAGCGTGAGCCAGTTCGATTCGAAAAAGCGCAAAATGACCGGCTCCAATATGCCGACGACGGGTCTGACCGGATCGGATAATAGCAAAAGTCCCGTCTCTACGCCAGCTAAAAAGGTTAAGACGGAAATTACGCCATCCCTTCC                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX628964             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGGAGGAAAAGAAATCGGAGGAGGATGAGGAAAAGGAGGACGAGAAGAATGGCAAATCGAAGGAGAAGGACAAGGACGGCAAGG AAAGGAAGGCAAAGAGAGCAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGACGACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCTAAAAAGGTTAAGACGGAAATTACGCCATCCCTTCCGCCCACGTTCGCTGGCATCGTTAATGCCACAAGCAAAGATGATTATGGCATAACCGAGGAAGCGGTCCGGCGGTACTTGATGCGCAAACCGATGACCACGACGGAACTACTGACCAAGTTCAAGAACAAGAAGACGGGTGTGTCGAGTGAGAAGCTGGTCGAAACCATGACCCAAATACTGAAACGCATCAATCCGGTCAAACAGACCATACAGGGCAAAATGTATCTCAGCATAAAG                                                                                                          ]
[+] EMBL BX624922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGAAGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACAGGCTCCAATATGCCGACGACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCTAAAAAGGTTAAGACGGAAATTACGCCATCCCTTCCGCCCACGTTCGCTGGCATCGTTAATGCCACAAGCAAAGATGATTATGGCATAACCGAGGAAGCGGTCCGGCGGTACTTGATGCGCAAACCGATGACCACGACGGAACTACTGACCAAGTTCAAGAACAAGAAGACGGGTGTGTCGAGCGAGAAGCTGGTCGAAACCATGACCCAAATTCTGAAACGCATCAATCCGGTCAAACAGACCATACAGGGCAAAATGTATCTCAGCATAAAGGTGCCGAAATGAGCGCGAAAAAGATTAACATTGAGGACTGGCGAAACGCATCGTAAGCACTAGC                                          ]
[+] EMBL BX628630             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGACGACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCTAAAAAGGTTAAGACGGAAATTACGCCATCCCTTCCGCCCACGTTCGCTGGCATCGTTAATGCCACAAGCAAAGATGATTATGGCATAACCGAGGAAGCGGTCCGGCGGTACTTGATGCGCAAACCGATGACCACGACGGAACTACTGACCAAGTTCAAGAACAAGAAGACGGGTGTGTCGAGTGAGAAGCTGGTCGAAACCATGACCCAAATACTGAAACGCATCAATCCGGTCAAACAGACCATACAGGGCAAAATGTATCTCAGCATAAAGGTGCCGAAATGAGCGCAAAAAAGATTAACATTGAGGACTGGCGAAACGCATCGTAAGCACTAGCAGTAATTTTAAAGCAGGAAATTTAAACNAATAAACTTT    ]
[+] EMBL CNS08FD3             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCCGATACGGCCAGTGCGAAGAAAAAAAAAAAAAAAAAAAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACTATTCGCGCTCGGCCTCGCCCAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGACGACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCTAAAAAGGTTAAGACGGAAATTACGCCATCCCTTCCGCCCACGTTCGCTGGCATCGTTAATGCCACAAGCAAAGATGATTATGGCATAACCGAGGAAGCGGTCCGGCGGTACTTGATGCGCAAACCGATGACCACGACGGAACTACTGACCAAGTTCAAGAACAAGAAGACGGGTGTGTC                                                                                                                                                                                                        ]
[+] EMBL BX620650             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGGACTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGACGACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCTAAAAAGGTTAAGACGGAAATTACGCCATCCCTTCCGCCCACGTTCGCTGGCATCGTTAATGCCACAAGCAAAGATGATTATGGCATAACCGAGGAAGCGGTCCGGCGGTACTTGATGCGCAAACCGATGACCACGACGGAACTACTGACCAAGTTCAAGAACAAGAAGACGGGTGTGTCGAGTGAGAAGCTGGTCGAAACCATGACCCAAATACTGAAACGCATCAATCCGGTCAAACAGACCATACAGGGCAAAATGTATCTCAGCATAAAGGTGCCGAAATGAGCGCAAAAAAGATTAACATTGAGGACTGGCGAAACGCATCGTAAGCACTAGCAGTAATTTTAAAGCAGGAAATTTAAACAAATAAACTTTTGGN]




>consensus_9282#0
CCGGTCGAAGTAGAAAAACATTCCCTTCGCCAGATTTTCTCCGGTGCAGTTGGTATTGTT
GTGTTTTAAGTTAGTTTCTATATTTTAACTTTCCCAAGGGCTAGGTGCACTGCGCAGCAA
GCAGAATGAGTGCACCATCGAACTCGAAGAGCGCCACTGGCCAACCGGGAGCTTCGGGTT
CGAGCGCGCCCACTACGGTGCAGGAGTTTGTGATTCGTGTGCCGAAGAATCTGAAAAAGA
AGTATCACGTCATGCGGTTCAACGCGACGCTCAACGTCGACTTTACCCAGTGGCGGACGG
TGAAGATGGAGCGCGAAAACAACCAGAAGGAGTACAAGGGCATCGAGGAGGTGATGCCCA
AGTTCGGTGCCGGCTCGGAGTTCAATCGGGATCTGCGCGAGGAGGCACGCCGGAAGCGGT
TCGGTATTATTTCGAAAAAGTACAAGCCCGAAGCGCAGCCCTGGATTTTGCGTGCCGGTG
GCAAGAGCGGCAAAATGTTCCGTGGCATCCGGGAGGGTGGCGTGGGCGAGAATGCTGCGT
TTTACGTGTTTACACACGCACCGGACGGGGCGATCGAGGCGTATCCGCTGAACGAGTGGT
ACAACTTTCAGCCCATCAACCGATACAAAGCACTGTCCGCGGAGGAAGCGGAGCAGGAGT
ACGGGCGGCGCAAGAAGACGATGAACTACTTCTCGCTCATGTTCCGGAAGCGGCTAAAGA
ANGGCGAGGATAACGAGGCCGACGACCAGGAGAAACAAAGGGCAAGAAGGGAGAGGGAGG
CAAGAGCAAGGATTTGAAGATCAGCGACATGGACGAGTGGATCGACTCGGATGAGGTGTC
GTCGTCGGGCGACGATGACGATGAGGGCAAGTCGAAGCAGAAGGACAGCGACGACGATGC
GAAGGATAAGAAGGCGAAGAACAAAAAGAAGGCACTGGCGGACAGCAAGAAGAAGAAGCG
GGACGTGGACGAGGAAGCGTTCGAAGAGTCGGACGATGGTGATGAGGAGGGGCGCGAGCT
GGACTACATCTCGGACTCGAGCGACAGCGAGTCGGACCACGACGCAAAGGTGGTGAAGGA
GATGAAGTCCGTTGCGGAGGAAGACGCACTGCGGAAGCTGCTGACCTCGGACGAAGATTC
GGAGGAGGAGGAAAAGAAATCGGAGGAGGATGAGGAAAAGGAGGACGAGAAGAATGGCAA
ATCGAAGGAGAAGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAA
GAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGA
TTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAA
GAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTC
GCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGAC
GACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCTAAAAAGGT
TAAGACGGAAATTACGCCATCCCTTCCGCCCACGTTCGCTGGCATCGTTAATGCCACAAG
CAAAGATGATTATGGCATAACCGAGGAAGCGGTCCGGCGGTACTTGATGCGCAAACCGAT
GACCACGACGGAACTACTGACCAAGTTCAAGAACAAGAAGACGGGTGTGTCGAGTGAGAA
GCTGGTCGAAACCATGACCCAAATACTGAAACGCATCAATCCGGTCAAACAGACCATACA
GGGCAAAATGTATCTCAGCATAAAGGTGCCGAAATGAGCGCAAAAAAGATTAACATTGAG
GACTGGCGAAACGCATCGTAAGCACTAGCAGTAATTTTAAAGCAGGAAATTTAAACNAAT
AAACTTTTGGN

consensusID : consensus_9282#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 404
fasta sequence

                              [CAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGACGACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCAAAAAAGATTAACATTGAGGACTGGCGAAACGCATCGTAAGCACTAGCAGTAATTTTAAAGCAGGAAATTTAAACAAATAAACTTTTGGTTCTTACAAATA]

[+] EMBL BX628596             [CAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGACGACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCAAAAAAGATTAACATTGAGGACTGGCGAAACGCATCGTAAGCACTAGCAGTAATTTTAAAGCAGGAAATTTAAACAAATAAACTTTTGGTTCTTACAAATA]




>consensus_9282#1
CAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGA
CTCGTCCAGCGATTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAA
GCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTC
GCGCTCGGCCTCGCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTC
CAATATGCCGACGACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCC
AGCAAAAAAGATTAACATTGAGGACTGGCGAAACGCATCGTAAGCACTAGCAGTAATTTT
AAAGCAGGAAATTTAAACAAATAAACTTTTGGTTCTTACAAATA

consensusID : consensus_9282#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 345
fasta sequence

                              [GGAGGAGGAAAAGAAACCGGAGGAGGATGAGGAAAAGGAGGACGAGAAGAATGGCAAATCGAAGGAGAAGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGTTTTTTTTTTTTTTTTTTTTTTCGGACAGTTCGGATTCCGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCCAGCGTGAGCCAGTTCGATTCGAAAAAGCGCAAAATGACCGGCTC]

[-] EMBL CNS08FD4             [GGAGGAGGAAAAGAAACCGGAGGAGGATGAGGAAAAGGAGGACGAGAAGAATGGCAAATCGAAGGAGAAGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAAGAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGTTTTTTTTTTTTTTTTTTTTTTCGGACAGTTCGGATTCCGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCCCAGCGTGAGCCAGTTCGATTCGAAAAAGCGCAAAATGACCGGCTC]




>consensus_9282#2
GGAGGAGGAAAAGAAACCGGAGGAGGATGAGGAAAAGGAGGACGAGAAGAATGGCAAATC
GAAGGAGAAGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAAGAA
AGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGTTTTTTTTTTTTTTTTT
TTTTTCGGACAGTTCGGATTCCGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAAGAA
GAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTCGCC
CAGCGTGAGCCAGTTCGATTCGAAAAAGCGCAAAATGACCGGCTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9282#0      CCGGTCGAAGTAGAAAAACATTCCCTTCGCCAGATTTTCTCCGGTGCAGTTGGTATTGTT 60
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GTGTTTTAAGTTAGTTTCTATATTTTAACTTTCCCAAGGGCTAGGTGCACTGCGCAGCAA 120
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GCAGAATGAGTGCACCATCGAACTCGAAGAGCGCCACTGGCCAACCGGGAGCTTCGGGTT 180
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      CGAGCGCGCCCACTACGGTGCAGGAGTTTGTGATTCGTGTGCCGAAGAATCTGAAAAAGA 240
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      AGTATCACGTCATGCGGTTCAACGCGACGCTCAACGTCGACTTTACCCAGTGGCGGACGG 300
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      TGAAGATGGAGCGCGAAAACAACCAGAAGGAGTACAAGGGCATCGAGGAGGTGATGCCCA 360
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      AGTTCGGTGCCGGCTCGGAGTTCAATCGGGATCTGCGCGAGGAGGCACGCCGGAAGCGGT 420
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      TCGGTATTATTTCGAAAAAGTACAAGCCCGAAGCGCAGCCCTGGATTTTGCGTGCCGGTG 480
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GCAAGAGCGGCAAAATGTTCCGTGGCATCCGGGAGGGTGGCGTGGGCGAGAATGCTGCGT 540
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      TTTACGTGTTTACACACGCACCGGACGGGGCGATCGAGGCGTATCCGCTGAACGAGTGGT 600
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      ACAACTTTCAGCCCATCAACCGATACAAAGCACTGTCCGCGGAGGAAGCGGAGCAGGAGT 660
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      ACGGGCGGCGCAAGAAGACGATGAACTACTTCTCGCTCATGTTCCGGAAGCGGCTAAAGA 720
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      ANGGCGAGGATAACGAGGCCGACGACCAGGAGAAACAAAGGGCAAGAAGGGAGAGGGAGG 780
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      CAAGAGCAAGGATTTGAAGATCAGCGACATGGACGAGTGGATCGACTCGGATGAGGTGTC 840
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GTCGTCGGGCGACGATGACGATGAGGGCAAGTCGAAGCAGAAGGACAGCGACGACGATGC 900
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GAAGGATAAGAAGGCGAAGAACAAAAAGAAGGCACTGGCGGACAGCAAGAAGAAGAAGCG 960
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GGACGTGGACGAGGAAGCGTTCGAAGAGTCGGACGATGGTGATGAGGAGGGGCGCGAGCT 1020
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GGACTACATCTCGGACTCGAGCGACAGCGAGTCGGACCACGACGCAAAGGTGGTGAAGGA 1080
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GATGAAGTCCGTTGCGGAGGAAGACGCACTGCGGAAGCTGCTGACCTCGGACGAAGATTC 1140
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GGAGGAGGAGGAAAAGAAATCGGAGGAGGATGAGGAAAAGGAGGACGAGAAGAATGGCAA 1200
consensus_9282#2      ---GGAGGAGGAAAAGAAACCGGAGGAGGATGAGGAAAAGGAGGACGAGAAGAATGGCAA 57
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      ATCGAAGGAGAAGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAA 1260
consensus_9282#2      ATCGAAGGAGAAGGACAAGGACGGCAAGGAAAAGGAAGGCAAAGAGAGCAAGAAGAAGAA 117
consensus_9282#1      ------------------------------------------------CAAGAAGAAGAA 12
                                                                      ************

consensus_9282#0      GAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGA 1320
consensus_9282#2      GAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGTTTTTTTTTTTTTT 177
consensus_9282#1      GAAAGCAAAGAAGAACAAGAGCAAAAAGTCGGAATCGGACAAAAAGGACTCGTCCAGCGA 72
                      **********************************************   *  *       

consensus_9282#0      TTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAA 1380
consensus_9282#2      TTTTTTTTCGGACAGTTCGGATTCCGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAA 237
consensus_9282#1      TTTCAGCTCGGACAGTTCGGATTCGGATACGGCCAGTGCGAAGAAAAAGCCGAAAGACAA 132
                      ***    ***************** ***********************************

consensus_9282#0      GAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTC 1440
consensus_9282#2      GAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTC 297
consensus_9282#1      GAAGAGCAAGGAAGGCGTTGGGTCGAATTTGTCCAGCGCAAACAATTCGCGCTCGGCCTC 192
                      ************************************************************

consensus_9282#0      GCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGAC 1500
consensus_9282#2      GCCCAGCGTGAGCCAGTTCGATTCGAAAAAGCGCAAAATGACCGGCTC------------ 345
consensus_9282#1      GCCTAGCGTGAGCCAGTTCGATTCGAACAAGCGCAAAATGACCGGCTCCAATATGCCGAC 252
                      *** *********************** ********************            

consensus_9282#0      GACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCTAAAAAGGT 1560
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      GACGGATCTGACCGGATCGGATAATAGCAACAGTCCCGTCTCTACGCCAGCAAAAAAGAT 312
                                                                                  

consensus_9282#0      TAAGACGGAAATTACGCCATCCCTTCCGCCCACGTTCGCTGGCATCGTTAATGCCACAAG 1620
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      TAACATTGAGGACTGGCGAAACGCATCGTAAGCACTAGCAGTAATTTTAAAGCAGGAAAT 372
                                                                                  

consensus_9282#0      CAAAGATGATTATGGCATAACCGAGGAAGCGGTCCGGCGGTACTTGATGCGCAAACCGAT 1680
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      TTAAACAAATAAACTTTTGGTTCTTACAAATA---------------------------- 404
                                                                                  

consensus_9282#0      GACCACGACGGAACTACTGACCAAGTTCAAGAACAAGAAGACGGGTGTGTCGAGTGAGAA 1740
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GCTGGTCGAAACCATGACCCAAATACTGAAACGCATCAATCCGGTCAAACAGACCATACA 1800
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GGGCAAAATGTATCTCAGCATAAAGGTGCCGAAATGAGCGCAAAAAAGATTAACATTGAG 1860
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      GACTGGCGAAACGCATCGTAAGCACTAGCAGTAATTTTAAAGCAGGAAATTTAAACNAAT 1920
consensus_9282#2      ------------------------------------------------------------
consensus_9282#1      ------------------------------------------------------------
                                                                                  

consensus_9282#0      AAACTTTTGGN 1931
consensus_9282#2      -----------
consensus_9282#1      -----------