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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9283#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1206 fasta sequence
[ACAGAACAAAAGTCGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCC-CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT-CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG-GGA-TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG-ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG-TT-TCAGCG-TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT-CAGCTCCGCGTT-GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA-AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTCTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACGCCGAGCGGTG]
[+] EMBL CNS095AJ [ACAGAACAAAAGTCGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACA GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACG CACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGCTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGT ]
[+] EMBL CNS09AU4 [ AGTCGTTATTTTTTATT CACCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG GGATTTGCGTATCGTGGGCAG ]
[+] EMBL CNS09L5N [ TCGTTTTTTTTTATTCC CCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGAAAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTTCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG GAA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGT ACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTTCTGGTCCGT ]
[+] EMBL CNS09DN2 [ tGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCCACCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACA GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGGTATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTtc ]
[+] EMBL CNS0908Y [ TTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACA GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTTCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAA CTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGT ]
[+] EMBL CNS08SGB [ CCTCTACTCACTACCCTCCTCTCCTCC CCCCTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTTGCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCGCCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGTTGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGTCCGCCTCGCACTTGGTCGCCT CCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAG GGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCA CGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCGCTTCGCACTGCCGCTCGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTTGGGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTTAGCGAGGCGGTGGAA CTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCC ]
[-] EMBL CNS0908X [ CCTCGCACTTGGTCGCCT CCCAC GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAG CCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTCTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACGCCGAGC ]
[-] EMBL CNS08SGA [ GCCTCCCCAC GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAG CCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCG TTCGAACTGCCGCTCGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGTTCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCATAAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTCTTACGCCCAAGCCCAGCC ]
[-] EMBL CNS09L5M [ CAC GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTC TACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTAACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTG TTATCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAGCTCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTA TAATTCCTACGCCCAA ]
[-] EMBL CNS095AI [ GTTCCACCGTGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAG CCCTTCGGCCAGGGAGTGCAGAACTG TT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCAT CAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGG TGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTGTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACG CGAGCGGTG]
[-] EMBL CNS09DN1 [ TGTTCGACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTGTTT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAAT ]
[+] EMBL CNS08O4C [ ACTCGTGGTACAGCGCGGTCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCG ]
[-] EMBL CNS09AU3 [ CACCGGTCCGTCACGATCGTGAGCAGATCCGTGTCCGGGTCTTACCGTTCGCCCACCAGCCGCAGCAGCTTTTCGCGCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGACGATGCGCGACAGCGGA TTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGACGTGACGCACGTCACCGG ATAGTGGGCCCGCATCTTTTCCTCCGTCTCCAGCCCCTTCGGCCAGGGAGTGCAGAACTGTTT TCAGCG TTCGCACTGCCGCTTGATGACCGGGGGCGTTAAATGCAAAAAGTTCGGTATCTTCATCCAG TCCGCGTT GGCAAACTTGCCGGGTGACATTTGGTTGCGCTTCGTCGCGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAA CTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCCGAACGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGAACCGACCGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCA AAATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTTGTTACGCCCAAGCCCAGCCTCCAAACACGCTTAAGTAATAATT ]
consensusID : consensus_9283#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 778 fasta sequence
[GCCGNTCGAGNTTNAGGCGCCAGCTCCACGGCACCTGTNACCGATGCGCGACACCTGGTATGCCGTATCGTGGCAGCNCGTGGTCANTATCGNACTGTGTACGCACGTCACCGGATAGTGGGCCCGCTATCTTGTTCCGTCCGTCTCCAGCCCCTTTCGGCCAAGGGTAGTTGCAGGTAACTGTTTCAGCGCTTCGCACTGCCGCTTGATGACCGGGGTCTTTTANATGCTTAAAGTTCGGTATCTTCATCAGCTCCGCGTTGCCAAACTTGCCGGGTGACATTGTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGACGGCACGTCGGACGGNNTTGAACGTGCACGNTCACCAGGGCCAATACCGCACCCCAGTCCTGGTCCAGTGGCCATCTGCTGTGAGCGAGCAGGTGGAACNCTGCCGGACGGGTCGCTTTCACAGGCAGAGCTAGCACAGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGNACTCTTCGTTGCGTTCGTAGACCAGCCAGAGTCGAGCNGCCGTCCTCCTGCAACCGGTTCGACTGCATATCGAATGCCGACACGTCTGTACCGAACGGCTCCACAGCAGCAGGCCAGGGTACACGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCACTCCAAACACGCTTAAGTAATAATTTCAGAACCGTTTGCCGACGCCGAGCGGTGTGGTTTAACCNCGGGGATCT]
[-] EMBL AL695637 [GCCGNTCGAGNTTNAGGCGCCAGCTCCACGGCACCTGTNACCGATGCGCGACACCTGGTATGCCGTATCGTGGCAGCNCGTGGTCANTATCGNACTGTGTACGCACGTCACCGGATAGTGGGCCCGCTATCTTGTTCCGTCCGTCTCCAGCCCCTTTCGGCCAAGGGTAGTTGCAGGTAACTGTTTCAGCGCTTCGCACTGCCGCTTGATGACCGGGGTCTTTTANATGCTTAAAGTTCGGTATCTTCATCAGCTCCGCGTTGCCAAACTTGCCGGGTGACATTGTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGACGGCACGTCGGACGGNNTTGAACGTGCACGNTCACCAGGGCCAATACCGCACCCCAGTCCTGGTCCAGTGGCCATCTGCTGTGAGCGAGCAGGTGGAACNCTGCCGGACGGGTCGCTTTCACAGGCAGAGCTAGCACAGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGNACTCTTCGTTGCGTTCGTAGACCAGCCAGAGTCGAGCNGCCGTCCTCCTGCAACCGGTTCGACTGCATATCGAATGCCGACACGTCTGTACCGAACGGCTCCACAGCAGCAGGCCAGGGTACACGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCACTCCAAACACGCTTAAGTAATAATTTCAGAACCGTTTGCCGACGCCGAGCGGTGTGGTTTAACCNCGGGGATCT]
consensusID : consensus_9283#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 449 fasta sequence
[CCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCAGAGCGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGTACCGAACGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCCTCCAACACGCTTAAGTAATATTTCAGCANTNACCTCGGGGAT]
[-] EMBL AL932901 [CCGGGTGACATTTGGTTGCGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTTGAACGTGCGCGGCCCGGGCCATACCGCACCCCAGTCCTGGTCCGTGGCCATCTGCTGTGAGCGAGGCGGTGGAACCTCCGGACGGGTCGCTTTCCGGCGAGCTAGCCGCTGTGACTTTGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTCTTCGAGACCGCCAGAGCGAGCGCCGTCCTCCTGCAACCGGGTCGACTGCAATCGAATGCCGACCGTCTGTACCGAACGGCTCCACAGCAGCGGCCAGGGACCGCAGGCACGTGCAAGCAAAGCCATCTCAAAATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCCTCCAACACGCTTAAGTAATATTTCAGCANTNACCTCGGGGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9283#0 ACAGAACAAAAGTCGTTATTTTTTATTCCACCTCTACTCACTACCCTCCTCTCCTCCCCC 60
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 ------------------------------------------------------------
consensus_9283#0 CTTCCACTCCTCATTGCGCCACCTGCTCCGGCTCGGCCAAACCGAGCAGCGCTAACGTTT 120
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 ------------------------------------------------------------
consensus_9283#0 GCTCCTTATACTTGGCTATATTATACTCGTTCTCGCCCTCGTTGAACAGCCTCGATACCG 180
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 ------------------------------------------------------------
consensus_9283#0 CCTCCCCGTACGCTTCCGGCACCTGCTGCCAGCCGCTGTCCCCTTCCTTCCGGCCCCAGT 240
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 ------------------------------------------------------------
consensus_9283#0 TGAGCGTCGCTTCCGCGTTCCGTTTGCTGCGGCTCTGCTCGTAGTCGAAAAACTCCATGT 300
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 ------------------------------------------------------------
consensus_9283#0 CCGCCTCGCACTTGGTCGCCTCCCACGGTTCCACCGTGTTCGACTCGTGGTACAGCGCGG 360
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 ------------------------------------------------------------
consensus_9283#0 TCAGCAGATAGATCGCGTAATCGTAGTTCTGCTTCTTGAGCGGGCACCGGTCCGTCACGA 420
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 ------------------------------------------------------------
consensus_9283#0 TCGTGAGCAGATCCGTGTCCGGGTCGTACCGTTCGCCCACCAGCCGCAGCAGCTTGTCGC 480
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 ------------------------------------------------------------
consensus_9283#0 GCGCGTGCCGATCGAGCTGCAGCGCGCCCAGCTCCACCTGCACCGTGAC-GATGCGCGAC 539
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 ------GCCGNTCGAGNTTNAG-GCGCC-AGCTCCACGGCACCTGTNACCGATGCGCGAC 52
consensus_9283#0 A---GGGATTGCGTATCGTGGGCAGCGCGTGGCAGTAGTCGGAC-GTG-ACGCACGTCAC 594
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 ACCTGGTATGCCGTATCGTGG-CAGCNCGTGGTCANTATCGNACTGTGTACGCACGTCAC 111
consensus_9283#0 CGGATAGTGGGCCCGC-ATCTTTTCC--TCCGTCTCCAGCCCCTT-CGGCCAGGGAG--- 647
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 CGGATAGTGGGCCCGCTATCTTGTTCCGTCCGTCTCCAGCCCCTTTCGGCCAAGGGTAGT 171
consensus_9283#0 TGCAG--AACTGTTTCAGCG-TTCGCACTGCCGCTTGATGACCGGGGGCGTT-AAATGCA 703
consensus_9283#2 ------------------------------------------------------------
consensus_9283#1 TGCAGGTAACTGTTTCAGCGCTTCGCACTGCCGCTTGATGACCGGGGTCTTTTANATGCT 231
consensus_9283#0 AAAAGTTCGGTATCTTCATCAGCTCCGCGTTGGCAAACTTGCCGGGTGACATT-TGGTTG 762
consensus_9283#2 -----------------------------------------CCGGGTGACATT-TGGTTG 18
consensus_9283#1 TAAAGTTCGGTATCTTCATCAGCTCCGCGTTGCCAAACTTGCCGGGTGACATTGTGGTTG 291
************ ******
consensus_9283#0 CGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTT-GAACGTGCG 821
consensus_9283#2 CGCTTCGTCACGTACCCCTGCCGGATCGGGAGCGGCACGGCGGACGGGTT-GAACGTGCG 77
consensus_9283#1 CGCTTCGTCACGTACCCCTGCCGGATCGGGA-CGGCACGTCGGACGGNNTTGAACGTGCA 350
******************************* ******* ******* * ********
consensus_9283#0 CGG---CCCGGGCCA-TACCGCACCCCAGTCCTGGTCC-GTGGCCATCTGCTGTGAGCGA 876
consensus_9283#2 CGG---CCCGGGCCA-TACCGCACCCCAGTCCTGGTCC-GTGGCCATCTGCTGTGAGCGA 132
consensus_9283#1 CGNTCACCAGGGCCAATACCGCACCCCAGTCCTGGTCCAGTGGCCATCTGCTGTGAGCGA 410
** ** ****** ********************** *********************
consensus_9283#0 GGCGGTGGAACCT--CCGGACGGGTCGCTTTCC--GGC-GAGCTAGCC--GCTGTGACTT 929
consensus_9283#2 GGCGGTGGAACCT--CCGGACGGGTCGCTTTCC--GGC-GAGCTAGCC--GCTGTGACTT 185
consensus_9283#1 GCAGGTGGAACNCTGCCGGACGGGTCGCTTTCACAGGCAGAGCTAGCACAGCTGTGACTT 470
* ******** ***************** *** ******** **********
consensus_9283#0 TGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTC---TTCG-AGACCGCCCGAA--CG 983
consensus_9283#2 TGTTTGCTTCAAGTTCAGCACACGGAACTCTTCTTC---TTCG-AGACCGCCAGAG--CG 239
consensus_9283#1 TGTTTGCTTCAAGTTCAGCACACGGNACTCTTCGTTGCGTTCGTAGACCAGCCAGAGTCG 530
************************* ******* * **** ***** * **
consensus_9283#0 AGCG-CCGTCCTCCTGCAACCGGGTCGACTGCA-ATCGAATGCCGAC-CGTCTGAACCGA 1040
consensus_9283#2 AGCG-CCGTCCTCCTGCAACCGGGTCGACTGCA-ATCGAATGCCGAC-CGTCTGTACCGA 296
consensus_9283#1 AGCNGCCGTCCTCCTGCAACCGGTTCGACTGCATATCGAATGCCGACACGTCTGTACCGA 590
*** ****************** ********* ************* ****** *****
consensus_9283#0 CCGGCTCCACAGCAGC-GGCCAGGG-AC-CGCAGGCACGTGCAAGCAAAGCCATCTCAAA 1097
consensus_9283#2 ACGGCTCCACAGCAGC-GGCCAGGG-AC-CGCAGGCACGTGCAAGCAAAGCCATCTCAAA 353
consensus_9283#1 ACGGCTCCACAGCAGCAGGCCAGGGTACACGCAGGCACGTGCAAGCAAAGCCATCTCAAA 650
*************** ******** ** *******************************
consensus_9283#0 ATCTCGTTCCGTGCCTGTGTTCCGTGTATTATTT-CTTACGCCCAAGCCCAGC-CTCCAA 1155
consensus_9283#2 ATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGC-CTCCAA 412
consensus_9283#1 ATCTCGTTCTGTGCCTGTGTTCTGTGTATTATTTGCTTCCGCCCAAGCCCAGCACTCCAA 710
********* ************ *********** *** ************** ******
consensus_9283#0 ACACGCTTAAGTAATAATTTCAGCACCGGTTTTGCCGGACGCCGAGCGGTG--------- 1206
consensus_9283#2 -CACGCTTAAGTAATA-TTTCAGCANTNACCTCGG-GGAT-------------------- 449
consensus_9283#1 ACACGCTTAAGTAATAATTTCAGAACCG--TTTGC-CGACGCCGAGCGGTGTGGTTTAAC 767
*************** ****** * * * **
consensus_9283#0 -----------
consensus_9283#2 -----------
consensus_9283#1 CNCGGGGATCT 778
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||