These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9284#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1698 fasta sequence [GTCCCAAAACACGGCGATTTCATCTCTGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGCTTACACCTTTTCCCATCCCCCTCATCACCATCATCGCAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCACCCTTAAGTCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCGTATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCATCTGACCGGGCACGTGGTGGACGATGTGGCGAGCCGCGTTCCGCTGCAGTACGTGAGCCACACGTTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAGGTGGCCGAAAATCCGAGAAGCCGGTCGGCTAAACTGCGCGCCGCCGTACGGTTGAGCTGAGGATGAGCACCACCACGCCGCGACGAATGAATAAAACTGAAACCAAATCTGTGTTAGCGATTAGTCAC] [+] EMBL BX625636 [GTCCCAAAACACGGCGATTTCATCTCTGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGCTTACACCTTTTCCCATCCCCCTCATCACCATCATCGCAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCACCCTTAAGTCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTG ] [+] EMBL BM613419 [ ccgCAAAACACGGCGATTTCATCTCTGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGCTTACACCTTTTCCCATCCCCCTCACCACCATCATCGCAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCACCCTTAAATCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGTGGCACGGgt ] [+] EMBL BX618636 [ ACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTC GGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAAGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCG ] [+] EMBL BX609194 [ ACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCGTATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCAT ] [+] EMBL BM603869 [ ccgGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCGTATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTT ] [+] EMBL BX617173 [ GGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCAGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCGTATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGTTGCTGGCAAAGCATCTGCTCCGTACCGGCGGC CTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCATCTGACCGGGCACGTGGTGGACGATGTGGCGAGCCGCGTTCCGCTGCAGTACGTGAGCCACACGCTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATG ] [+] EMBL BM623275 [ ccgGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCGCATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCATCTGACCGGGCACGTGGTGGACGATGTGGCGAGCCGCGTTCCGCTGCAGTACGTTAGCCACACGTTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAGGTGGCCGAAAATCCGAGAAGCCGGTCGGCTAAACTGCGCGCCGCCGTACGGTTGAGCTGAGGATGAGCACCACCACGCCGCGACGAATGAATAAAACTGAAACCAAATCTGTGTTAGCGATTAGTCAC] [+] EMBL BM636576 [ ccgCGTTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAGGTGGCCGAAAATCCGAGAAGCCGGTCGGCTAAACTGCGCGCCGCCGTACGGTTGAGCTGAGGATGAGCACCACCACGCCGCGACGAATGAATAAAACTGAAACCAAATCTGTGTTAGCGATTAGTCAC] consensusID : consensus_9284#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 683 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCG] [+] EMBL BM627902 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCG] [+] EMBL AL713814 [ tccccgattTAAAG TTTTTGAGCCACAGCGCGA CAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGAGGAAAAGCAGGC ] [+] EMBL BM589185 [ ccgCACACGCGTGCCCTGCTCGAGGCCGCACCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCA ] consensusID : consensus_9284#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 622 fasta sequence [CCGGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCACCCTTAAATCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTG] [+] EMBL BM621941 [CCGGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCACCCTTAAATCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGGTAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGTTCGGTG] [+] EMBL BM601609 [ ccgCGAGTCAAAATCAAAAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTTGGAACGGTGGCCGGTCGACAAGAGCAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCGATCAGCTGACGGCCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTGCACGCGAACCGGTACCCGCGCACCCTTAAATCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGAC GGCGTGCACGATGGTGTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGGTAGGGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCCCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAGGTGTTTATCGATATGACGT ] consensusID : consensus_9284#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 587 fasta sequence [CCGCCCACTCGTCCGGAAAGAATAAACGGGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGTAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCCAAACGACGGCCGAGCTGGCGAACATTGTGGTGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCTCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCATATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCATCTGACCGGTCACGTGGTGGACGATGTGGCGAGCCGCGTTCCGCTGCAGTACGTTAGCCACACGCTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAGGTGGCCGA] [+] EMBL BM629578 [CCGCCCACTCGTCCGGAAAGAATAAACGGGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCTCAAGGTGTACGGGGTAGGAAAAGCAGGCGAAAAAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCCAAACGACGGCCGAGCTGGCGAACATTGTGGTGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTACGACTTCCGCCAGGACAAACTGCTCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGCGCTGCATATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCGCTCGAGGACACGATCGTGAAGCGCCATCTGACCGGTCACGTGGTGGACGATGTGGCGAGCCGCGTTCCGCTGCAGTACGTTAGCCACACGCTGGCGCACGAAACGGAGGCGATGCAGGAGATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAGGTGGCCGA] consensusID : consensus_9284#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 528 fasta sequence [GCAGAATCGGCACGNNNNACGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCTCCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGCAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCGTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAGNNAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCG] [+] EMBL BX468853 [GCAGAATCGGCACGNNNNACGCGACCAGGTGTTTATCGATATGACGTTCGGTGCGGGCGGTCACACGCGTGCCCTGCTCGAGGCCGCTCCCGGCTCGACGGTGGTCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCGTGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCGCTGTTGGGTCGATTTTTCCGAACTTCCGGCCCTGTTGCGCACGGTCGAGGGGCTTGATCGGCAGCGGCATTTCGACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGATGCAAGCGGCCCGTGGCTTTTCCATCTCGCACGATGGGCCGCTCGATATGCGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCGCGGCCGAGGTGCTCGCACGCATCCAGGAACCGGATCTCGTGCGCATCCGTCAAGGTGTACGGGGAGGAAAAGCAGGCGAAGNNAGATTGCCCGCGCGATCGTGAATGCACGGTTCACGGTGAAGCGCATCGAAACGACGGCCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 GTCCCAAAACACGGCGATTTCATCTCTGGCGTAATCTTTCCTTGCTTGCGGAAATTGTGC 60 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 ATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGCTTACACCTTTTCCCATCCCCCTCAT 120 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 CACCATCATCGCAGAGCGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCC 180 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 TTTTGGAACGGTGGCCGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGC 240 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 GCGATCAGCTGACGGTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTC 300 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 TTCAGCGGCAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACC 360 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 CGCGCACCCTTAAGTCGACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGT 420 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------CCGCCCACGCGTCCGCCC 18 consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 CCACCGAGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGT 480 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGAGCGATAGTAGGACGAACTAGTTTAGG 78 consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 GTGGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGATAGTAGGACGAACTAGTTTAGG 540 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 TAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCC 138 consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 -----------------------------------------------------------C 1 consensus_9284#0 TAGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCC 600 consensus_9284#2 ------------------------------------------------CCGGGCGTAATC 12 consensus_9284#1 CCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCA 198 consensus_9284#4 -------------------------------GCAGAATCGGC--ACGNNNNACGCGACCA 27 consensus_9284#3 CGCCCACTCGTCCGGAAAGAATAAACGGGAGGTGCTCGCACGCATCCAGGAACCGGATCT 61 consensus_9284#0 CCTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCA 660 consensus_9284#2 TTTCCTTGCTTGCGGAAATTGTGCATCGATGTAGAGCGCATCGAGTCAAAATCAAAAGAG 72 * * consensus_9284#1 GGTGTTTATCGATATGACGTT-CGGTGCGGGCGGT-CACACGCGTGCC-CTGCTCGAGGC 255 consensus_9284#4 GGTGTTTATCGATATGACGTT-CGGTGCGGGCGGT-CACACGCGTGCC-CTGCTCGAGGC 84 consensus_9284#3 CGTGCGCATCCTCAAGGTGTA-CGGGGTAGGAAAAGCAGGCGAAAAAGATTGCCCGCG-- 118 consensus_9284#0 GGTGTTTATCGATATGACGTT-CGGTGCGGGCGGT-CACACGCGTGCC-CTGCTCGAGGC 717 consensus_9284#2 CGCGCACGGAACTATGTCCCAGCACTACAAGAACTTCCTGAGCCTTTT-GGAACGGTGGC 131 * * * * * * * * * * consensus_9284#1 CGCACC-CGGCTCGACGGTGG-TCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCG 313 consensus_9284#4 CGCTCC-CGGCTCGACGGTGG-TCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCG 142 consensus_9284#3 CGATCG-TGAATGCACGGT---TCACGGTGAAGCGCATCCAAACGACGGCCGAGCTGGCG 174 consensus_9284#0 CGCACC-CGGCTCGACGGTGG-TCGCCCTCGACCGTGATCCACTCGCGCACCGGTTGGCG 775 consensus_9284#2 CGGTCGACAAGAGTAAGGTGGGCCGCGACTTGGGACAGTATCTGCGCG-ATCAGCTGACG 190 ** * * *** * * ** * ** ** consensus_9284#1 TGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCG-CTGTTGGGTCGATTTT-CCG 371 consensus_9284#4 TGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCG-CTGTTGGGTCGATTTTTCCG 201 consensus_9284#3 ---AACATTGTGGTGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGGCAGGGTACGTAC 231 consensus_9284#0 TGTGAAATGGCGGCGCAGTTTCCCGGCCGCATCGTACCG-CTGTTGGGTCGATTTT-CCG 833 consensus_9284#2 ------GTCGTGCTGGGCTCCTCGAACATTGTCGCCGTCAAGGACGATCGTCTTCAGCGG 244 * * * * * * ** * * * consensus_9284#1 AACTTCCGGCC--------CTGTT-------GCGCACG-GTCGAGGGGCTTGATCGGCA- 414 consensus_9284#4 AACTTCCGGCC--------CTGTT-------GCGCACG-GTCGAGGGGCTTGATCGGCA- 244 consensus_9284#3 GACTTCCGCCAGG-ACAAACTGCTCCGGCCAGCGCACGTGGCGACGAAAACGTTCCAAGC 290 consensus_9284#0 AACTTCCGGCC--------CTGTT-------GCGCACG-GTCGAGGGGCTTGATCGGCA- 876 consensus_9284#2 CAGTTCCACTCGCTGGAAAATATTGTCAACGACGTACACGCGAACCGGTACCCGCGCAC- 303 * **** * * ** ** * * * consensus_9284#1 GCGGCATTTC------GACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGA 468 consensus_9284#4 GCGGCATTTC------GACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGA 298 consensus_9284#3 GCTGCATATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATGGTGCTGG-CGA 349 consensus_9284#0 GCGGCATTTC------GACGGTGTGCTGTTCGACTTCGGCTGCTCCTCGATGCAGTTCGA 930 consensus_9284#2 -CCTTAAATC--GACCGCCACCGGGCTGACCGGGGAACAGTGCCGTGAAGTGTTGTCCAC 360 * * ** * * **** ** * * ** * * consensus_9284#1 TG-AAGCGGCCCGTGGCTTTTCCATCTCGC--ACGAT---GGG---CCGCTCGAT-ATG- 517 consensus_9284#4 TGCAAGCGGCCCGTGGCTTTTCCATCTCGC--ACGAT---GGG---CCGCTCGAT-ATG- 348 consensus_9284#3 AGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGAT---CGCGTTCCACTCGCTCGAG- 405 consensus_9284#0 TG-AAGCGGCCCGTGGCTTTTCCATCTCGC--ACGAT---GGG---CCGCTCGAT-ATG- 979 consensus_9284#2 CG--AGTTCCTAGAGATTATACAGAAGAAGAAAGAATAGACGGGGGGTGCACGATGGTGT 418 * * * ** * * ** * * consensus_9284#1 CGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCG-CGGCCGAGGTGCTCGCACGCAT 576 consensus_9284#4 CGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCG-CGGCCGAGGTGCTCGCACGCAT 407 consensus_9284#3 GACACGATCGTGAAGCGCCATCT-GACCGGTCACGTGGTGGACGATGTGGCGAGCCGCGT 464 consensus_9284#0 CGCATGGACCGGGACCGCTGTCCCGAGCAGCTGTCCG-CGGCCGAGGTGCTCGCACGCAT 1038 consensus_9284#2 GGCACGGTTTAGGAGGGGCAGTGGCAGTAGTAGCGAT-AGTAGGACGAACTAGTTTAGGT 477 ** * * * * * * * ** * * consensus_9284#1 CCAGGAACCGG-ATCTCGTGCGCATCC-TCAAGGTG-TACGGGGAGGAAAAGCAGGCGAA 633 consensus_9284#4 CCAGGAACCGG-ATCTCGTGCGCATCCGTCAAGGTG-TACGGGGAGGAAAAGCAGGCGAA 465 consensus_9284#3 TCCGCTGCAGT-ACGTTAGCCACACGC----TGGCG-CACGAAACGGAGGCGATGCAGGA 518 consensus_9284#0 CCAGGAACCGG-ATCTCGTGCGCATCC-TCAAGGTG-TACGGGGAGGAAAAGCAGGCGAA 1095 consensus_9284#2 AGAGCAAAGGGCATCGCGCGAAGATGCTACTCGGCGGTAGCAACCGGTGCCAAAGCGCCC 537 * * * * * ** * * ** * consensus_9284#1 -AAAGATTGCCCGCGC-GATCGTGAATGCAC--G-GTTCACGGTGAAGCGCATCG----- 683 consensus_9284#4 GNNAGATTGCCCGCGC-GATCGTGAATGCAC--G-GTTCACGGTGAAGCGCATCGAAACG 521 consensus_9284#3 GATGATGAAGCCGCACTGGAAGCAGATGCAC--AAGCACGTGATGGTACCGACGGACGAG 576 consensus_9284#0 -AAAGATTGCCCGCGC-GATCGTGAATGCAC--G-GTTCACGGTGAAGCGCATCGAAACG 1150 consensus_9284#2 CTTCACCGGGCCGTGATGGCAACGGAAACGGTAAAGTTTTTTGAGCCACAGCGCGACCAG 597 *** * * * * * * * consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ACGGCCG----------------------------------------------------- 528 consensus_9284#3 GAGGTGGCCGA------------------------------------------------- 587 consensus_9284#0 ACGGCCGAGCTGGCGAACATTGTGGCGCACTGTCTGAGCCAGGGCGAGTCGGCCGGCGGG 1210 consensus_9284#2 GTGTTTATCGATATGACGTTCGGTG----------------------------------- 622 consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 CAGGGTACGTACGACTTCCGCCAGGACAAACTGCGCCGGCCAGCGCACGTGGCGACGAAA 1270 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 ACGTTCCAAGCGCTGCGTATCTTCGTCAACAACGAGCTGAACGAAATCAACTACGGGATG 1330 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 GTGCTGGCGAAGCATCTGCTCCGTACCGGCGGCAAGCTGGTAACGATCGCGTTCCACTCG 1390 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 CTCGAGGACACGATCGTGAAGCGCCATCTGACCGGGCACGTGGTGGACGATGTGGCGAGC 1450 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 CGCGTTCCGCTGCAGTACGTGAGCCACACGTTGGCGCACGAAACGGAGGCGATGCAGGAG 1510 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 ATGATGAAGCCGCACTGGAAGCAGATGCACAAGCACGTGATGGTACCGACGGACGAGGAG 1570 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 GTGGCCGAAAATCCGAGAAGCCGGTCGGCTAAACTGCGCGCCGCCGTACGGTTGAGCTGA 1630 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 ------------------------------------------------------------ consensus_9284#4 ------------------------------------------------------------ consensus_9284#3 ------------------------------------------------------------ consensus_9284#0 GGATGAGCACCACCACGCCGCGACGAATGAATAAAACTGAAACCAAATCTGTGTTAGCGA 1690 consensus_9284#2 ------------------------------------------------------------ consensus_9284#1 -------- consensus_9284#4 -------- consensus_9284#3 -------- consensus_9284#0 TTAGTCAC 1698 consensus_9284#2 -------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||