cluster # 9291

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Anopheles gambiae
cluster # 9291 cluster # 9291 Sequences # 15 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9291#0 length = 1043 sequences # 9
consensus_9291#1 length = 780 sequences # 2

consensus_9291#2 length = 686 sequences # 2
consensus_9291#3 length = 669 sequences # 1
consensus_9291#4 length = 244 sequences # 1

consensusID : consensus_9291#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1043
fasta sequence

                              [GAATTGCCCAGGTTTATGCAGGCATGACGGGTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCTGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGTGCACGACCGGGCCGGTGCAGCGTATG-GAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGC-TGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCG-CGAACGAGATACAGTACAATCTGCACGGCATCGTCG-GTACG-GCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG-CGAAGCGCAACGTCGAGGGTCAGGACATGC-TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC-TGAAACTATCGCCGGGCAGTTCCGA-CGCAA-CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA-GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT-ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT-GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAATCGATGATATACTACTAAACGGAA]

[+] EMBL AL693594             [GAATTGCCCAGGTTTATGCAGGCATGACGGGTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCTGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGTGCACGACCGGGCCGGTGCAGCGTATGTGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCCGAACGAGATACAGTACAATCTGCACGGCATCGTCGCGTACGTGCCGATACGGTCGCGG CAAGATGACGG GAACAGCATCTTCACCATCGCCGAAGCGCAACGTCGAGGGTCAGGACATGCTTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTTGAAACTATCGCCGGGCAGTTCCGACCGCAA CGCTCAG CTGAAAACGCGCTCGGTTGAGGTCGGAGGCGATCATCTTTGCCG TTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCA CAACGGTGTGTAGAGTTTAGTATTGTTCATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCA CCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTTGGGGTGGCAAA                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BX613571             [                                                                   TGCCGAGCGCTCCGCTGCAAGTGGC GCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTG GCACGACCGGGCCGGTGCAGCGTATG GAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGC TGGATAAGCGCTTCTTTCTGACCACCTGGAAGGAAATTCCGGCCG CGAACGAGATACAGTACAATCTGCACGGCATCGTCG GTACG GCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG CGAAGCGCAACGTCGAGGGTCAGGACATGC TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACT                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM647704             [                                                                                                                                                         ccgAGCGTATG GAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGC TGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCG CGAACGAGATACAGTACAATCTGCACGGCATCGTCG GTACG GCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG CGAAGCGCAACGTCGAGGGTCAGGACATGC TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGGTCTG                                                                                                                                                                                                                                ]
[+] EMBL BM578753             [                                                                                                                                                                                                                                                                                                         ccgGGAAATTCCGGCCG CGAACGAGATACAGTACAATCTGCACGGCATCGTCG GTACG GCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG CGAAGCGCAACGTCGAGGGTCAGGACATGC TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAA                               ]
[+] EMBL BM596033             [                                                                                                                                                                                                                                                                                                                                                                              ccgCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG CGAAGCGCAACGTCGAGGGTCAGGACATGC TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCG                                                 ]
[-] EMBL BM579826             [                                                                                                                                                                                                                                                                                                                                                                                  GCGGCCAAGATGACGGCGAACAGCATCTTCACCATCG CGAAGCGCAACGTCGAGGGTCAGGACATGC TGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAATCGATGATATACTACTAAACGG  ]
[-] EMBL CNS09QLI             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gGGAGC GGAAACAACCGCCGGGCAGTTCTTT TTTAACCGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGG GCGATCATTTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTTTCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTTTCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAATCGATGATAT              ]
[+] EMBL BX627233             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGC TGAAACTATCGCCGGGCAGTTCCGA CGCAA CGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGA GCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTT ATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGTTGAGTT GGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGTTGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAATCGATGATATAC            ]
[-] EMBL AGA284410            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATATTTCTTCATGCACAGTATGAAAACGACCCATGAGTTTTAGTAGTATCGAATAAGCGTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGTACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAATCGATGATATACTACTAAAaaaaa]




>consensus_9291#0
GAATTGCCCAGGTTTATGCAGGCATGACGGGTTGCGATTCAACTGAACAAAAACAGCTTC
GGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCTGCCACTGCAACCGTCGCAATCGGTTGA
TACGTCGCTCGCCCTTGTGCACGACCGGGCCGGTGCAGCGTATGGAGCCGCTGAACAACC
TGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCA
ACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGG
AAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATA
CGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGG
GTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC
TGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGG
TCGGAGCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACG
CGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTTATATTCCATTAGATTGTAACC
GTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGT
TGAGTTGGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGT
TGTTCGCAGAAGAGGCAATATTCATCTTCTGTGGTTCTGTTCTGCAGCGCTATTATTATA
TTTCTTCATGCACAGTATGAAAACGAGCCATGAGTTTTAGTAGTATCGAATAAGCGTCTA
TCTCTCCCTAGCAATGTACGCAAACTAGACAAAAACACATCGCGTAAAGAGAACTGTAGT
ACCATATGTATCGATACAATTCACACATCGTCCGTCGTGACTACCTAAATAAAGTATAAT
CGATGATATACTACTAAACGGAA

consensusID : consensus_9291#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 780
fasta sequence

                              [GCCAGCATCAACGTGGATCTGCTTGGCGGTGGGCTGGATATTCTGCTCGGCGGCGGTCCCGTGGCATCTAATGACGCGGCACCAGCGGCTCCAGCACCGGCCGGTGGCTCCGCTGCGGGAGGACTGCTCGGAGACATTTTCGGTATCGGCCCAGTGAGCAGCTCGAACATGATACAGATCCCGAAAATCACCTGTCTGCCATCGGACAAGGGCAAGGGACTCGAAATTCAGGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTTCGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAGCGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTATTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCC]

[+] EMBL AGA285716            [GCCAGCATCAACGTGGATCTGCTTGGCGGTGGGCTGGATATTCTGCTCGGCGGCGGTCCCGTGGCATCTAATGACGCGGCACCAGCGGCTCCAGCACCGGCCGGTGGCTCCGCTGCGGGAGGACTGCTCGGAGACATTTTCGGTATCGGCCCAGTGAGCAGCTCGAACATGATACAGATCCCGAAAATCACCTGTCTGCCATCGGACAAGGGCAAGGGACTCGAAATTCAGGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM653520             [                                                                                                                                                                                  ccgCGAAAATCACCTGGCTGCCAGCGGACAAGGGCAAGGGACTCGAAATTCAGGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAGCGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTATTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCC]




>consensus_9291#1
GCCAGCATCAACGTGGATCTGCTTGGCGGTGGGCTGGATATTCTGCTCGGCGGCGGTCCC
GTGGCATCTAATGACGCGGCACCAGCGGCTCCAGCACCGGCCGGTGGCTCCGCTGCGGGA
GGACTGCTCGGAGACATTTTCGGTATCGGCCCAGTGAGCAGCTCGAACATGATACAGATC
CCGAAAATCACCTGTCTGCCATCGGACAAGGGCAAGGGACTCGAAATTCAGGGCACTTTC
TCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCA
ATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTTCGACTGGTGCCGAGCGCTCCG
CTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACG
ACCGGGCCGGTGCAGCGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAAC
GTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGA
CAGCTGGATAAGCGCGTATTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATA
CAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCAAGATGACGGCG
AACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCG
CTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCC

consensusID : consensus_9291#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 686
fasta sequence

                              [AGGCAGAATTGCCCGAGGTNTAT-CCGAAAATCACCTGGCTGCCAGCGGACAAGGGCAAGGGACTCGAAATTCAGTGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAG-CGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTG-TTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGA-GATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACG]

[+] EMBL AL696959             [AGGCAGAATTGCCCGAGGTNTAT CCGAAAATCACCTGGCTGCCAGCGGACAAGGGCAAGGGACTCGAAATTCAGTGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAG CGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTG TTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGA GATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACG]
[+] EMBL AL696185             [       ATCGCCAGAGGT TATCCCGAAAATCA CTGGCTG CAGCGGAC AGGGCAAGGGACTCGAAATTCAG GGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTTGATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAGCCGTATGGAGCCGCTGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGANGATACAGTACAATCTGCACGGCATCGTCGGTACGGGCGATACGGTCGCGGCAAGATGA                                                                                                                                                                                             ]




>consensus_9291#2
AGGCAGAATTGCCCGAGGTNTATCCGAAAATCACCTGGCTGCCAGCGGACAAGGGCAAGG
GACTCGAAATTCAGTGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATGACG
TTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAACAGC
TTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCGGTT
GATACGTCGCTCGCCCTTGGCACGACCGGGCCGGTGCAGCGTATGGAGCCGCTGAACAAC
CTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGC
AACGTACTGTTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGG
AAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATA
CGGTCGCGGCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGG
TCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCT
GAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGT
CGGAGCGATCATCTTTGCCGCTTACG

consensusID : consensus_9291#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 669
fasta sequence

                              [TCCCCGAGGTTAGCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCACANATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTTATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAACGGAGACAGAGCGCGAGAGGAGTTGAGTTGGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCAGTCGTTGTTCGCAGAAGAGNGCCATATTCATCTCTCTGTGGTTCTGTTCTGCAGCGCTCATTATTATATTTCTTCATGCACAGATGAAAACGAGCCATGAGTT]

[+] EMBL AL933333             [TCCCCGAGGTTAGCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCACANATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTTATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAACGGAGACAGAGCGCGAGAGGAGTTGAGTTGGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCAGTCGTTGTTCGCAGAAGAGNGCCATATTCATCTCTCTGTGGTTCTGTTCTGCAGCGCTCATTATTATATTTCTTCATGCACAGATGAAAACGAGCCATGAGTT]




>consensus_9291#3
TCCCCGAGGTTAGCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGG
ATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACA
ATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCACANATGACGGCGAACAGC
ATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAG
CTGACGAACAACATCTGGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCA
ACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACGAG
CAGATTATCCGTTCGCCGTAAAGACTCAACGCGCGCGAACCACCAACCGTGTGTAGAGTT
TAGTATTGTTATATTCCATTAGATTGTAACCGTTGGACAAAGATGCCACCCGAATACTCC
GTTAGATAACGGAGACAGAGCGCGAGAGGAGTTGAGTTGGGTGGCAAAATCGTTACGCGG
ACTCGAAGCACACATTGTGGGCGGCAGTCGTTGTTCGCAGAAGAGNGCCATATTCATCTC
TCTGTGGTTCTGTTCTGCAGCGCTCATTATTATATTTCTTCATGCACAGATGAAAACGAG
CCATGAGTT

consensusID : consensus_9291#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 244
fasta sequence

                              [CGCAGAAGAAGCAATATACATCTCCTGTGGTGCTGTGCCGCAGCGCTAAGATGACACACCTCCATGCACAGTATGAAAACGAGCCATGAGTCAGAGCAGTAACGAATAAGCGTCTATCCCGCCCTAGCAAGGTACGCAAAATAGACAAAAACACATCGCGTAAAGAGAACGGTAGTACCATACGTAACGATACAATCCACACATCGTCCGTCGGGACTACCTAAATAAAGTAAAAACGATGAAA]

[+] EMBL BX612248             [CGCAGAAGAAGCAATATACATCTCCTGTGGTGCTGTGCCGCAGCGCTAAGATGACACACCTCCATGCACAGTATGAAAACGAGCCATGAGTCAGAGCAGTAACGAATAAGCGTCTATCCCGCCCTAGCAAGGTACGCAAAATAGACAAAAACACATCGCGTAAAGAGAACGGTAGTACCATACGTAACGATACAATCCACACATCGTCCGTCGGGACTACCTAAATAAAGTAAAAACGATGAAA]




>consensus_9291#4
CGCAGAAGAAGCAATATACATCTCCTGTGGTGCTGTGCCGCAGCGCTAAGATGACACACC
TCCATGCACAGTATGAAAACGAGCCATGAGTCAGAGCAGTAACGAATAAGCGTCTATCCC
GCCCTAGCAAGGTACGCAAAATAGACAAAAACACATCGCGTAAAGAGAACGGTAGTACCA
TACGTAACGATACAATCCACACATCGTCCGTCGGGACTACCTAAATAAAGTAAAAACGAT
GAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9291#0      GAATTGCCCAGGTTTATGCAGGCATGACGGGTTGCGATTCAACTGAACAAAAACAGCTTC 60
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ------------------------------------------------------------
consensus_9291#1      ------------------------------------------------------------
consensus_9291#2      ------------------------------------------------------------
                                                                                  

consensus_9291#0      GGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCTGCCACTGCAACCGTCGCAATCGGTTGA 120
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ------------------------------------------------------------
consensus_9291#1      ------------------------------------------------------------
consensus_9291#2      ------------------------------------------------------------
                                                                                  

consensus_9291#0      TACGTCGCTCGCCCTTGTGCACGACCGGGCCGGTGCAGCGTATGGAGCCGCTGAACAACC 180
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ------------------------------------------------------------
consensus_9291#1      ------------------------------------------------------------
consensus_9291#2      ------------------------------------------------------------
                                                                                  

consensus_9291#0      TGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCTGTCTCGTGCACGGCA 240
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ------------------------------------------------------------
consensus_9291#1      ------------------------------------------------------------
consensus_9291#2      ------------------------------------------------------------
                                                                                  

consensus_9291#0      ACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGG 300
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ------------------------------------------------------------
consensus_9291#1      ------------------------------------------------------------
consensus_9291#2      ------------------------------------------------------------
                                                                                  

consensus_9291#0      AAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATA 360
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ------------------------------------------------------------
consensus_9291#1      ------------------------------------------------------------
consensus_9291#2      ------------------------------------------------------------
                                                                                  

consensus_9291#0      CGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGG 420
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ------------------------------------------------------------
consensus_9291#1      ------------------------------------------------------------
consensus_9291#2      ------------------------------------------------------------
                                                                                  

consensus_9291#0      GTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGC 480
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ------------------------------------------------------------
consensus_9291#1      -------------------------GCCAGCATCAACGTGGATCTGCTTGGCGGTGGGCT 35
consensus_9291#2      ------------------------------------------------------------
                                                                                  

consensus_9291#0      TGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGG 540
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ------------------------------------------------------------
consensus_9291#1      GGATATTCTGCTCGGCGGCGGTCCCGTGGCATCTAATGACGCGGCACCAGCGGCTCCAGC 95
consensus_9291#2      ------------------------------------------------------------
                                                                                  

consensus_9291#0      TCGGAGCGATCATCTTTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAGACTCAACG 600
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ------------TCCCCGAGGTTAGCTGTCTCGTGCACGGCAACGTACTGTTTGTGGAGG 48
consensus_9291#1      ACCGGCCGGTGGCTCCGCTGCGGGAGGACTGCTCGGAGACATTTTCGGTATCGGCCCAGT 155
consensus_9291#2      ------------------------------------------------------------
                                                                                  

consensus_9291#0      CGCGCGAACCACCAACCGTGTGTAGAGTTTAGTATTGTTATATTCCATTAGATTGTAACC 660
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ACGGACAGCTGGATAAGCGCGTCTTTCTGACCACCTGGAAGGAAATTCCGGCCGCGAACG 108
consensus_9291#1      GAGCAGC-TCGAACATGATACAGATCCCGAAAATCACCTGTCTGCCATCGGACAAGGGCA 214
consensus_9291#2      AGGCAGAATTGCCCGAGGTNTA---TCCGAAAATCACCTGGCTGCCAGCGGACAAGGGCA 57
                                                                                  

consensus_9291#0      GTTGGACAAAGATGCCACCCGAATACTCCGTTAGATAAGGAGACAGAGCGCGAGAGGAGT 720
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      AGATACAGTACAATCTGCACGGCATCGTCGGTACGGCCGATACGGTCGCGGCCACANATG 168
consensus_9291#1      AGGGACTCGAAATTCAG-GGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATG 273
consensus_9291#2      AGGGACTCGAAATTCAGTGGCACTTTCTCGCGCCGAGCCGGCCAGGTGTACATGGACATG 117
                                                                                  

consensus_9291#0      TGAGTTGGGTGGCAAAATCGTTACGCGGACTCGAAGCACACATTGTGGGCGGCCAGTCGT 780
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ACGGCGAACAGCATCTTCACCATCGCGAAGCGCAACGTCGAGGGTCAGGACATGCTGTAC 228
consensus_9291#1      ACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAAC 333
consensus_9291#2      ACGTTCACCAACAAGGCGATGCAGGCAATGACCGGGTTTGCGATTCAACTGAACAAAAAC 177
                                                                                  

consensus_9291#0      TGTTCGCAGAAG-----AGGCAATATTCATCTTCTG-TGGTTCTGTT-CTGCAGCGCTAT 833
consensus_9291#4      ----CGCAGAAG-----AAGCAATATACATCTCCTG-TGGTGCTGTG-CCGCAGCGCTAA 49
consensus_9291#3      CAGTCGCTGAAGCTGACGAACAACATCTGGGTGTTGCTGGAGCTGAA-AC-TATCGCCGG 286
consensus_9291#1      AGCTTTCGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCG 393
consensus_9291#2      AGCTTCGGACTGGTGCCGAGCGCTCCGCTGCAAGTGGCGCCACTGCAACCGTCGCAATCG 237
                                 *        *             **  *   ***         *     

consensus_9291#0      TATTATATTTCTTCATGCACAGTATGAAAACGAGCCATG----AGTTTTAGTAGTAT--- 886
consensus_9291#4      GATGACACACCTCCATGCACAGTATGAAAACGAGCCATG----AGTCAGAGCAGTAA--- 102
consensus_9291#3      GCAGTTCCGACGCAACGCTCAGCCTGAAAACGCGCTCGGTTGAGGTCGGAGCGATCATCT 346
consensus_9291#1      GTTGATACGTCGCT-CGCCCTTGGCACGACCGGGCCGGT--GCAGCGTATGGAGCCGC-- 448
consensus_9291#2      GTTGATACGTCGCT-CGCCCTTGGCACGACCGGGCCGGT--GCAGCGTATGGAGCCGC-- 292
                                *     ** *        * ** **         *     *         

consensus_9291#0      ------CGAATAAGC-GTCTATCTCTCCCTAGCAATGTACGCAAACTAGACAAAA-ACAC 938
consensus_9291#4      ------CGAATAAGC-GTCTATCCCGCCCTAGCAAGGTACGCAAAATAGACAAAA-ACAC 154
consensus_9291#3      TTGCCGCTTACGAGCAGATTATCCGTTCGCCGTAAAG-ACTCAACGCGCGCGAACCACCA 405
consensus_9291#1      ------TGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCT 502
consensus_9291#2      ------TGAACAACCTGCAGGTTGCTATCAAAAACAACGTGGACATCTTCTACTTTGCCT 346
                               *  * * *    *           *        *              *  

consensus_9291#0      ATCGCGTAAAGAGAACTGTAGTACC-ATATGTATCGATACAATTCACACATCGTCCGTCG 997
consensus_9291#4      ATCGCGTAAAGAGAACGGTAGTACC-ATACGTAACGATACAATCCACACATCGTCCGTCG 213
consensus_9291#3      ACCGTGTGTAGAGTTTAGTATTGTT-ATA--TTCCATTAGATTGTAACCGTTGGACAAAG 462
consensus_9291#1      GTCTCGTGCACGGCAACGTACTGTTTGTGGAGGACGGACAGCTGGATAAGCGCGTATTTC 562
consensus_9291#2      GTCTCGTGCACGGCAACGTACTGTT-GTGGAGGACGGACAGCTGGATAAGCGCGTCTTTC 405
                        *  **  *  *    *** *     *      *       *  *              

consensus_9291#0      TGACTACCTAAATAAAGTAT-AATCGATGATATACTACTAAACGGAA------------- 1043
consensus_9291#4      GGACTACCTAAATAAAGTAA-AAACGATGAAA---------------------------- 244
consensus_9291#3      ATGCCACCCGAATACTCCGTTAGATAACGGAGACAGAGCGCGAGAGGAGTTGAGTTGGGT 522
consensus_9291#1      TGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCG 622
consensus_9291#2      TGACCACCTGGAAGGAAATTCCGGCCGCGAACGAGATACAGTACAATCTGCACGGCATCG 465
                         * ***   *                *                               

consensus_9291#0      ------------------------------------------------------------
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      GGCAAAATCGTTACGCGGACTCGAA-GCACACATTGTGGGCGGCAGTCGTTGTTCGCAGA 581
consensus_9291#1      TCGGTACGGCCGATACGGTCGCGGCCAAGATGACGGCGAACAGCATCTTCACCATCGCGA 682
consensus_9291#2      TCGGTACGGCCGATACGGTCGCGGC-AAGATGACGGCGAACAGCATCTTCACCATCGCGA 524
                                                                                  

consensus_9291#0      ------------------------------------------------------------
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      AGAGNGCCATATTCATCTCTCTGTGGTTCTGTTCTGCAGCGCTCATTATTATATTTCTTC 641
consensus_9291#1      AGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCT 742
consensus_9291#2      AGCGCAACGTCGAGGGTCAGGACATGCTGTACCAGTCGCTGAAGCTGACGAACAACATCT 584
                                                                                  

consensus_9291#0      ------------------------------------------------------------
consensus_9291#4      ------------------------------------------------------------
consensus_9291#3      ATGCACAGATGAAAACGAGCCATGAGTT-------------------------------- 669
consensus_9291#1      GGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCC---------------------- 780
consensus_9291#2      GGGTGTTGCTGGAGCTGAAACTATCGCCGGGCAGTTCCGACGCAACGCTCAGCCTGAAAA 644
                                                                                  

consensus_9291#0      ------------------------------------------
consensus_9291#4      ------------------------------------------
consensus_9291#3      ------------------------------------------
consensus_9291#1      ------------------------------------------
consensus_9291#2      CGCGCTCGGTTGAGGTCGGAGCGATCATCTTTGCCGCTTACG 686