cluster # 9304

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Anopheles gambiae
cluster # 9304 cluster # 9304 Sequences # 15 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9304#0 length = 1050 sequences # 11
consensus_9304#1 length = 787 sequences # 2

consensus_9304#2 length = 622 sequences # 1
consensus_9304#3 length = 425 sequences # 1

consensusID : consensus_9304#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1050
fasta sequence

                              [TCGAGCACTGTTGGCCTACTGATACATTTTCACGCGTGGTTCGCGAATCGAGCGGCTCTTAGCAAAACGATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA-CCCCATAAGCTCGAAGTACATATATAACAGGTTGCTCTCCCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC-AACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC-GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACAAAACAAAAGAAGAAGAAATCAAAAAAATAAAATAGAAAAACTACCATTCTACCAAAAAAAAAAAAAAAGGCCACATGTGCTCG]

[-] EMBL CNS09IX4             [TCGAGCACTGTTGGCCTACTGATACATTTTCACGCGTGGTTCGCGAATCGAGCGGCTCTTAGCAAAACGATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACACCCCCATAAGCTCGAAGTACATATATAACAGGTTGCTTTCTCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACCATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCG TACGC AACGGCTTTATAACAGAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGGAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGAAACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACAAAACAAAAGAAGAAGAAATCAAAAAAAT                                                       ]
[+] EMBL BM613497             [           ccgcttgtcGATACATTTTCACGCGTGGTTCGCGAATCGAGCAGCTCTTAGCAAAACAATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA CCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGTTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCATCCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09MEP             [                           TTTCACGCGTGGTTCGCGAATCGAGCGGCTCTTAGCAAAACGATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA CCCCATAAGCTCGAAGTACATATATAACAGGTTGCTTTCTCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACCATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGGAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGAAACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACAAAACAAAAGAAGAAGAAATCAAAAAAATAAAATAGAAAAACTACCATTCTACCAAAAAAAAAAAAAAAGGCCACATGTGCTCG]
[+] EMBL CNS09IX3             [                                               TCGAGCGGCTCTTAGCAAAACGATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA CCCCATAAGCTCGAAGTACATATATAACAGGTTGCTTTCTCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACCATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGGAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGAAACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACAAAACAAAAGAAGAAGAAATCAAAAAAATAAAATAGAAAAACTACCATTCTACCAAAAAA                        ]
[+] EMBL CNS08VO8             [                                                        TCTTAGCAAAACAATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA CCACATTAGCTCGAAGTACATATATAACAGGTTGCTCACCCACCGCCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAATCAAACGATGCTCACGATTCCTGCAAGAGGTAGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTCGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGTTTGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGCTTTATATCGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAAAAGCGCCGTCAATGCGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGAGTTTGTTTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTTCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATTGTGTTGAGCACAAGAAGACGAAACAAAAG                                                                          ]
[+] EMBL BX621674             [                                                             GCAAAACGATCACATATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACA CCACAAAAGCTCGAAGTACATATATAACAGGTTGCTCTCCCACCGCCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAAGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAAGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTCGACTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTTCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACATTCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGCAAGCCATAAAGCGTTTTGCTCAGGACACGGGAAGATTTTATTTCCTTTTCCGATACGAANAGTGATGTGAGTGTGTCTCGCGACNAATATCAACAGCCAGTTCAGCCGCGCACGAAAAg                                                                                                                                                                        ]
[+] EMBL BX622947             [                                                                                             CGAAAAATGTGAATTTAAATCAATATTCAACA CCACAAAAGCTCGAAGTACATATATAACAGGTTGCTCTCCCACCGCCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAAGCGAAAAAGGCATCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAAGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTCGACTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTCATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTTCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACATTCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGANGTGGCAAAGTT                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AGA280119            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGC AACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGGCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATG                                                                                                                                                                                                                            ]
[-] EMBL CNS08VO9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccACGCGGTTCAAGCGTTGCTAAGCTGGTTGAGGGTTTTGTCG TCCGC CCCGGCTTTTTATCGAAAAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGCGAAGAAAAGCGCCGTCAATGCGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGA TTTTTCTCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACGAAACAAAAGAAGAAGAAATCAAAAAAATAAAAT                                                  ]
[-] EMBL AGA282543            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGGTGGATGAAGGATGTGTCGCTACGCAAACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGGCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGTGCACGAAAAAGTTCAAACTGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCAC                                                                                            ]
[-] EMBL AGA281817            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     gGAAAACGAACCCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGGCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACAC GGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCCAGTTCAGCCGTGCACGAAAAAGTTCAAACTGGTCAAGAGTACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAG                                                                                               ]




>consensus_9304#0
TCGAGCACTGTTGGCCTACTGATACATTTTCACGCGTGGTTCGCGAATCGAGCGGCTCTT
AGCAAAACGATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATT
CAACACCCCATAAGCTCGAAGTACATATATAACAGGTTGCTCTCCCACCGTCAGCCAGTG
TACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAAAACCTTCGTAATGT
TTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATG
CTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCAT
TAGATTGCTCCAAAGTGGGCAAGTGCTTGCCTGCTTCATACTTGACTCCTTTAACCCGAA
AGTATTTGGCAAGCTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCT
GGCAGTGCCTTCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAA
GCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGT
GTCGCTACGCAACGGCTTTATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAA
GAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGA
GGTGGCAAAGTTTTACGTTTACGGACCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTT
TGCTCAGGACACGGAAGATTTTATTTCCTTTTCCGATACGAAGAGTGATGTGAGTGTGTC
TCGCGACAAATATCAACAGCCAGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAG
TACGTACGTCCCCCTGAAGGTGAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAA
GAAGACAAAACAAAAGAAGAAGAAATCAAAAAAATAAAATAGAAAAACTACCATTCTACC
AAAAAAAAAAAAAAAGGCCACATGTGCTCG

consensusID : consensus_9304#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 787
fasta sequence

                              [CAGAATCCCCCGAGGTNNACGAGGGTGGTTCGCGAATCGAGCAGCTCTTAGCAAAACAATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGAACAAAACAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGGCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCGAAAGTATTTGGCAAGTTAATCATCCAGATGGCACGAAAGCGTAACCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCCCGGTGGACTGCGGCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACACGTCGGCTGAAGAACAGGCCGTCAATGTGCCTATGACCGATGACGGAGGTGGCAANGTTTTACGTTTACGGGCCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTNCAGCTCAGGACACGGGAAGATT]

[+] EMBL AL930734             [CAGAATCCCCCGAGGTNNACGAGGGTGGTTCGCGAATCGAGCAGCTCTTAGCAAAACAATCACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGAACAAAACAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGGCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCGAAAGTATTTGGCAAGTTAATCATCCAGATGGCACGAAAGCGTAACCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCCCGGTGGACTGCGGCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACACGTCGGCTGAAGAACAGGCCGTCAATGTGCCTATGACCGATGACGGAGGTGGCAANGTTTTACGTTTACGGGCCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTNCAGCTCAGGACACGGGAAGATT]
[+] EMBL AGA280914            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAACGCATAAGCAGGCCGATGGTTCCA                                                                                                                                                           ]




>consensus_9304#1
CAGAATCCCCCGAGGTNNACGAGGGTGGTTCGCGAATCGAGCAGCTCTTAGCAAAACAAT
CACTTATTAAAGGTTTCTCCAGCGAAAAATGTGAATTTAAATCAATATTCAACACCCCAT
AAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGA
ACAAAACAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACC
TTTGACGATTGATTGGGCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCT
GCAAGAGGTGGAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCA
AAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCGAAAGTATTTGGCAAG
TTAATCATCCAGATGGCACGAAAGCGTAACCTTCCGTACTGGTGCTGGCAGTGCCATCCT
TCCCGGTGGACTGCGGCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGA
ACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGG
ATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACACGT
CGGCTGAAGAACAGGCCGTCAATGTGCCTATGACCGATGACGGAGGTGGCAANGTTTTAC
GTTTACGGGCCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTNCAGCTCAGGACACGG
GAAGATT

consensusID : consensus_9304#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 622
fasta sequence

                              [GGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGGTACGAAAACGTCTTATCGTTACGTTTTGCCTTTCATTAACCAACTGACTAATATGCGTCTTTTGCTTTCCTTGCGTAGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGTTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGGCCGGCCGTTGAGAA]

[+] EMBL BX620671             [GGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGGTACGAAAACGTCTTATCGTTACGTTTTGCCTTTCATTAACCAACTGACTAATATGCGTCTTTTGCTTTCCTTGCGTAGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGTTAATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCCCGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACCACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTACGGGCCGGCCGTTGAGAA]




>consensus_9304#2
GGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCAT
ACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGGTACGAAAA
CGTCTTATCGTTACGTTTTGCCTTTCATTAACCAACTGACTAATATGCGTCTTTTGCTTT
CCTTGCGTAGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTG
GGCAAGTGCTAGCCTGCTTTATACTTGACTCCTTTAACCCGAAAGTATTTGGCAAGTTAA
TCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCC
CGGTGGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAAC
AATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGAT
TCATAACGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACCACCGC
CGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACG
TTTACGGGCCGGCCGTTGAGAA

consensusID : consensus_9304#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 425
fasta sequence

                              [GCGAATCGAGCAGCTCTTAGCNAAACAATCACTTATTAGAAGGTTTCTCCAGCTAAAAATGTGAATTTAAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTNGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTNCGACTCCTTTAACCCGAAAGTATTTGGCCAANGTTNAATCATCCTTCCCCGGTGGGACTG]

[+] EMBL BX619721             [GCGAATCGAGCAGCTCTTAGCNAAACAATCACTTATTAGAAGGTTTCTCCAGCTAAAAATGTGAATTTAAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTNGGCCCCGCATACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAAACGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTATACTNCGACTCCTTTAACCCGAAAGTATTTGGCCAANGTTNAATCATCCTTCCCCGGTGGGACTG]




>consensus_9304#3
GCGAATCGAGCAGCTCTTAGCNAAACAATCACTTATTAGAAGGTTTCTCCAGCTAAAAAT
GTGAATTTAAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCT
CTACCACCGTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCTT
CCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTNGGCCCCGCATACCG
GAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAAACGTAAACACATCGT
CAGCGGATGTAACGGCGTCATTAAGATTGCTCCAAAGTGGGCAAGTGCTAGCCTGCTTTA
TACTNCGACTCCTTTAACCCGAAAGTATTTGGCCAANGTTNAATCATCCTTCCCCGGTGG
GACTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9304#1      ------------------------------------------------------------
consensus_9304#3      ------------------------------------------------------------
consensus_9304#0      ------------------------------------------------------------
consensus_9304#2      GGCTTCCAAAAACCTTCGTAATGTTTTAGCTCAACCTTTGACGATTGATTGGCCCCGCAT 60
                                                                                  

consensus_9304#1      -----------------CAGAATCCCCCGAGGTNNACGAGGGTGGTTCGCGAATCGAGCA 43
consensus_9304#3      ------------------------------------------------GCGAATCGAGCA 12
consensus_9304#0      ------TCGAGCACTGTTGGCCTACTGATACATTTTCACGCGTGGTTCGCGAATCGAGCG 54
consensus_9304#2      ACCGGAGAGTGAAGTAAAACGATGCTCACGATTCCTGCAAGAGGTGGAACGGTACGAAAA 120
                                                                       **   ***   

consensus_9304#1      GCTCTTAGCAAAACAAT----CACTTATTA-AAGGTTTCTCCAGCGAAAAATGTGAATTT 98
consensus_9304#3      GCTCTTAGCNAAACAAT----CACTTATTAGAAGGTTTCTCCAGCTAAAAATGTGAATTT 68
consensus_9304#0      GCTCTTAGCAAAACGAT----CACTTATTA-AAGGTTTCTCCAGCGAAAAATGTGAATTT 109
consensus_9304#2      CGTCTTATCGTTACGTTTTGCCTTTCATTAACCAACTGACTAATATGCGTCTTTTGCTTT 180
                        ***** *   **  *    *  * ****      *     *        * *   ***

consensus_9304#1      AAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACC 158
consensus_9304#3      AAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGATTGCTCTACCACC 128
consensus_9304#0      AAATCAATATTCAACACCCCATAAGCTCGAAGTACATATATAACAGGTTGCTCTCCCACC 169
consensus_9304#2      CCTTGCGTAGTAAACACATCGTCAGCGGATGTAACGGCGTCATTAGATTGCTCCAAAGTG 240
                         *   ** * *****  * * ***       **      *  ** ******       

consensus_9304#1      GTCAGCCAGTGTACAACCATGAACAAAAC-AAGGAAAAGGCGAAAAAGGCTTCCAAA--A 215
consensus_9304#3      GTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCTTCCAAA--A 186
consensus_9304#0      GTCAGCCAGTGTACAACCATGAACAAAACCAAGGAAAAGGCGAAAAAGGCATCCAAA--A 227
consensus_9304#2      GGCAAGTGCTAGCCTGCTTTATACTTGAC-TCCTTTAACCCGAAAGTATTTGGCAAGTTA 299
                      * **     *   *  *  *  **   **       **  *****        ***   *

consensus_9304#1      ACCTTCGTAATGTTTT---AGCTCAACCTTTGACGATTGAT--TGG----GCCC-GCATA 265
consensus_9304#3      ACCTTCGTAATGTTTT---AGCTCAACCTTTGACGATTGAT--TNG----GCCCCGCATA 237
consensus_9304#0      ACCTTCGTAATGTTTT---AGCTCAACCTTTGACGATTGAT--TGG----CCCC-GCATA 277
consensus_9304#2      ATCATCCAGATGGCACGAAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCATCCTTC 359
                      * * **   ***       ***  **** **    * ** *  * *     **   * * 

consensus_9304#1      CCGG-AGAGTGAAGTAA-AACGATGCTCACGATTCCTGCAA-GAGGTGGAA-CGTAAACA 321
consensus_9304#3      CCGG-AGAGTGAAGTAA-AACGATGCTCACGATTCCTGCAA-GAGGTGGAAACGTAAACA 294
consensus_9304#0      CCGG-AGAGTGAAGTAA-AACGATGCTCACGATTCCTGCAA-GAGGTGGAA-CGTAAACA 333
consensus_9304#2      CCGGTGGACTGCGGCCGCAACAGTACCTTT-ATGGCTGTAACGAAGCTCAA-AGAAAACG 417
                      ****  ** **  *    ***  * *     **  *** ** ** *   **  * **** 

consensus_9304#1      CATCGTCAGCGGATGTAACGGCGTCATTA-GATTGCTCCAAAGTGGGCAAGTGCTAGCCT 380
consensus_9304#3      CATCGTCAGCGGATGTAACGGCGTCATTAAGATTGCTCCAAAGTGGGCAAGTGCTAGCCT 354
consensus_9304#0      CATCGTCAGCGGATGTAACGGCGTCATTA-GATTGCTCCAAAGTGGGCAAGTGCTTGCCT 392
consensus_9304#2      AACAATCCGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACG 477
                       *   ** *  *  **    ****   ** * * * *  *   ** *    * *    * 

consensus_9304#1      GCTTTATACTT------GACTCCTTTAACC-GAAAGTATTTGGC---AAGTTAATCATCC 430
consensus_9304#3      GCTTTATACTNC-----GACTCCTTTAACCCGAAAGTATTTGGCCAANGTTNAATCATCC 409
consensus_9304#0      GCTTCATACTT------GACTCCTTTAACCCGAAAGTATTTGGC---AAGCTAATCATCC 443
consensus_9304#2      GATTCATAACGCAGAAGCAGGCCGATGGTTCCACAATA--CGACAGAAGAAAACGAAACC 535
                      * ** ***          *  **  *      * * **   * *        *   * **

consensus_9304#1      AGATGGCACG--AAAGCGTAACCTTCCGTACTGGTGCTGGCAGTGCCATCCTTCCCGGTG 488
consensus_9304#3      TTCCCCGGTG--GGACTG------------------------------------------ 425
consensus_9304#0      AGATGGCACG--AAAGCGTAACCCTTCCGTACTGGTGCTGGCAGTGCCTTCCTTCCCGGT 501
consensus_9304#2      ACCGCCGGCGAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTT 595
                               *    *  *                                          

consensus_9304#1      GACTGCGGCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATCCG 548
consensus_9304#3      ------------------------------------------------------------
consensus_9304#0      GGACTGCGGCCGCAACAGTACCTTTATGGCTGTAACGAAGCTCAAAGAAAACGAACAATC 561
consensus_9304#2      TTACGTTTACGGGCCGGCCGTTGAGAA--------------------------------- 622
                                                                                  

consensus_9304#1      ACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGATTCATAA 608
consensus_9304#3      ------------------------------------------------------------
consensus_9304#0      CGACGCGGTTCAAGCGTTGCTAAGCTGGATGAAGGATGTGTCGCTACGCAACGGCTTTAT 621
consensus_9304#2      ------------------------------------------------------------
                                                                                  

consensus_9304#1      CGCAGAAGCAGGCCGATGGTTCCACAATACGACAGAAGAAAACGAAACACGTCGGCTGAA 668
consensus_9304#3      ------------------------------------------------------------
consensus_9304#0      AACGCAGAAGCAGGCCGATGGTTCCACAATACGACGGAAGAAAACGAAACCACCGCCGGC 681
consensus_9304#2      ------------------------------------------------------------
                                                                                  

consensus_9304#1      GAACAGGCCGTCAATGTGCCTATGACCGATGACGGAGGTGGCAANGTTTTACGTTTACGG 728
consensus_9304#3      ------------------------------------------------------------
consensus_9304#0      GAAGAACAGCGCCGTCAATGTGCCTATGACCGATGAGGAGGTGGCAAAGTTTTACGTTTA 741
consensus_9304#2      ------------------------------------------------------------
                                                                                  

consensus_9304#1      GCCCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTNCAGCTCAGGACACGGGAAGATT- 787
consensus_9304#3      ------------------------------------------------------------
consensus_9304#0      CGGACCGGCCGTTGAGAATAAGCAAGCCATGAAGCGTTTTGCTCAGGACACGGAAGATTT 801
consensus_9304#2      ------------------------------------------------------------
                                                                                  

consensus_9304#1      ------------------------------------------------------------
consensus_9304#3      ------------------------------------------------------------
consensus_9304#0      TATTTCCTTTTCCGATACGAAGAGTGATGTGAGTGTGTCTCGCGACAAATATCAACAGCC 861
consensus_9304#2      ------------------------------------------------------------
                                                                                  

consensus_9304#1      ------------------------------------------------------------
consensus_9304#3      ------------------------------------------------------------
consensus_9304#0      AGTTCAGCCGCGCACGAAAAAGTTCAAACCGGTCAAGAGTACGTACGTCCCCCTGAAGGT 921
consensus_9304#2      ------------------------------------------------------------
                                                                                  

consensus_9304#1      ------------------------------------------------------------
consensus_9304#3      ------------------------------------------------------------
consensus_9304#0      GAACCGCGTGCAGGGCAACCCCAATCGTGTCGAGCACAAGAAGACAAAACAAAAGAAGAA 981
consensus_9304#2      ------------------------------------------------------------
                                                                                  

consensus_9304#1      ------------------------------------------------------------
consensus_9304#3      ------------------------------------------------------------
consensus_9304#0      GAAATCAAAAAAATAAAATAGAAAAACTACCATTCTACCAAAAAAAAAAAAAAAGGCCAC 1041
consensus_9304#2      ------------------------------------------------------------
                                                                                  

consensus_9304#1      ---------
consensus_9304#3      ---------
consensus_9304#0      ATGTGCTCG 1050
consensus_9304#2      ---------