cluster # 9308

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Anopheles gambiae
cluster # 9308 cluster # 9308 Sequences # 15 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9308#0 length = 1399 sequences # 8
consensus_9308#1 length = 760 sequences # 4

consensus_9308#2 length = 686 sequences # 2
consensus_9308#3 length = 158 sequences # 1

consensusID : consensus_9308#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1399
fasta sequence

                              [CAGAATCGCACGAGGTTACTCAGAACTTCACCAGTGCTGTTCTAAGGTTCGCTTGTGCCCACCAAGTGTTTGTTTTCTTCTTC-CCT-GTACGAGACCCTCCCCACTCCAACTAGTAGCAACAGCAGTAGCTACCGCCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCTAAGCACTACCTCAGCATTACTAGCACACACACACCCTCCGTGCGCGTCTCCGGCCGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGG-AATGAGAGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTAC-GTACTGGTCAGT-GTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCGTGCCTGTCCCC-GCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGA-CTTTGG-CGAAAACTTTACCATCACCTC-GCTCGA-GCCGAT-CAA-GATCGACCGGCTGACGATCGAGCGGG-GCGAAAACTTTA-A-GGCAAACTTTACCAACTTCCGGATCAGCGGTGCGACGCACGAGAAGACGGGGTTCATCGTGAAGAAGCTAAAAACCGATATTGACAATCGACAGATTAATGCCACCATCCTGCTGCCGAAGCTGCAGGTCAACTCGAAGTACTCGCTGAAGATGAGCATTCTGGTGCTGCAGATCAATGGCGATGGTGATCTGCAGGTGAATCTGACCGACACCNAGGTAAGCCTGAAGCTGACGTTCTACACGGAAACGGTCGACGGGGAGGAGTACTTCCGCTTCAATCCGATCAATCTGCGCGTTAAGTTTGGCAAGGCACGGTTCTATCTGAAGAATCTGTTCAACGGCGATCCGACGCTGGATATGATCGGCAATCAGGCGATCAACGAAAATCCGGACGTGCTGCTGGATGAGGTGAAGGGCGGCATTGAGGAGAATTTGGCCAAACTGTTCACCAAGATTGCGAGCGAGGTGGTCAAGGATGCACTGTTCGAGGAGGTGTTCCCGTGGAGCTAAGGAGGACCCTCCTCAGCGGCAAGTGTGATAAAGGAAGTGGTGGAGTGTAAGGTGGTGATAGACGCAAAAGAAA-GGGGGGTCAGATATATTGAGAAACAAAAACAAACACGTGAGCACTGAGCTGATGTATGTGATGTGATGTGTGTTTTCTGTTGGTTCCTTGTTGCCTTGCAATCTTGTGCGGCATTTGAGGTAAAGCGTTCGATTTTGAGGAGAAGCAAACGATGCAATAAATATGGAGAATCC]

[+] EMBL AL696784             [CAGAATCGCACGAGGTTACTCAGAACTTCACCAGTGCTGTTCTAAGGTTCGCTTGTGCCCACCAAGTGTTTGTTTTCTTCTTC CCTGGTACGAGACCCTCCCCACTCCAACTAGTAGCAACAGCAGTAGCTACCGCCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCTAAGCACTACCTCAGCATTACTAGCACACACACACCCTCCGTGCGCGTCTCCGGCCGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTG TTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTG CACCGG ACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGGCAATGAGAGCGATGACAACGGGCAAGGCCG CG CAGCGTGGATCGGCTGCTGACAGTCGG TAC GTACTGGTCAGT GTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGGCTACCGTTTTGCGTGCCTGTCCCCGGAAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGacg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM591285             [           ccGGCTGCTCAGAACTTCACCAGTGCTGTTCTAAGGTTCGCTTGTGCCCACCAAGTGTTTGTTTTCTTCTTC CCT GTACGAGACCCTCCCCACTCCAACTAGTAGCAACAGCAGTAGCTACCGCCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCTAAGCACTACCTCAGCATTACTAGCACACACACACCCTCCGTGCGCGTCTCCGGCCGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGG AATGAGAGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTAC GTACTGGTCAGT GTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCGTGCCTGTCCCC GCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGA CTTTGG CGAAAACTTTACCATCACCTC GCTCGA GCCGAT CAA GATCGACCGGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX621504             [                                  TGCTGTTCTAAGGTTCGCTTGTGCCCACCAAGTGTTTGTTTTCTTCTTC CCT GTACGAGACCCTCCCCACTCCAACTAGTAGCAACAGCAGTAGCTACCGCCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCTAAGCACTACCTCAGCATTACTAGCACACACACACCCTCCGTGCGCGTCTCCGGCCGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGG AATGAGAGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTAC GTACTGGTCAGT GTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCGTGCCTGTCCCC GCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGA CTTTGG CGAAAACTTTACCATCACCTC GCTCGA GCCGAT CAA GATCGACCGGCTGACGATCGAGCGGG GCGAAAACTTTA A GGCAAACTTTACCAACTTCCGGATCAGCGGTGCGACGCACGAGAAGACGGGGTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX623084             [                                         CTAAGGTTCGCTTGTGCCCACCAAGTGTTTGTTTTCTTCTTC CCT GTACGAGACCCTCCCCACTCCAACTAGTAGCAACAGCAGTAGCTACCGCCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCTAAGCACTACCTCAGCATTACTAGCACACACACACCCTCCGTGCGCGTCTCCGGCTGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGG AATGAGAGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTAC GTACTGGTCAGT GTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCGTGCCTGTCCCC GCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGA CTTTGG CGAAAACTTTACCATCACCTC GCTCGA GCCGAT CAA GATCGACCGGCTGACGATCGAGCGGG GCGAAAACTTTA A GGCAAACTTTACCAACTTCCGGATCAGCGGTGCGACGCACGAGAAGACGGGGTTCATCGTGAAGAAGCTAAAAACCGATATTGACAATCGACAGATTAATGCCACCATCCTGCTGCCGAAGCTGCAGGTCAACTCGAAGTACTCGCTGAAGATGAGCATTCTGGTGCTGCAGATCAATGGCGATGGTGATCTGCAGGTGAATCTGACCGACACCNAGGTAAGCCTGAAGCTGACGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AL692389             [                                        cgnggttaTCGCTTGTGCCCACCAAGTGNTTGTTTTCTTCTTCNTCT GTACGAGACCCTCCCCACTCCAACTAGTAGCAACAGCAGTAGCTACCGCCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCTAAGCACTACCTCAGCATTACTAGCACACACACACCCTCCGTGCGCGTCTCCGGCCGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGG AATGAGAGCGATGACAACGGGCAAGGCCGCCG CAGCGTGGATCGGCTGCTGACAGTCGGCTACAGTACTGGTCAGTAGTCGGGG CATGATCACCCTCGTCGGTGCCGGTTTGGCTACCGTTTTGCGTGCCTGTCCCC GCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTANCGACGGGCGACCTTTGGCCGAAAACTTTACCATCACCTCGGNTCGAGGCCGATCCAACGATCGACCGG TGACGATCGAGCGGGCGCGAAAACTTTACAGGGNAAACTTTACCAAgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM632717             [                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgGT GTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCGTGCCTGTCCCC GCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGA CTTTGG CGAAAACTTTACCATCACCTC GCTCGA GCCGAT CAA GATCGACTGGCTGACGATCGAGCGGG GCGAAAACTTTA A GGCAAACTTTACCAACTTCCGGATCAGCGGTGCGACGCACGAGAAGACGGGCTTCATCGTGAAGAAGCTAAAAACCGATATTGACAATCGACAGATAAATGCCACCATCCTGCTGCCGAAGCTGCAGGTCAACTCGAAGTACTCGCTGAAGATGAGCATTCTGGTGCTGCAGATCAATGGCGATGGTGATCTGCAGGTGAATCTGACCGACACCAAGGTAAGCCTGAAGCTGACGTTCTACACGGAAACGGTCGACGGGGAGGAGTACTTCCGCTTCAATCCGATCAATCTGCGCGTTAAGTTTGGCAAGGCACGGTTCTATCTGAAGAATCTGTTCAACGGCGATCCGACGCTGGATATGATCGGCAATCAGGCGATCAACGAAAATCCGGACGTGCTGCTGGATGAGGTGAAGGGCGGCATTGAGGAGAATTTGGCCA                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL BX611603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TGATCGGCAATCAGGCGATCAACGAAAACCCGGACGTGCTGCTGGATGAGGTGAAGGGCGGCATTGAGGAGAATTTGGCCAAACTGTTCACCAAGATTGCGAGCGAGGTGGTCAAGGATGCACTGTTCGAGGAGGTGTTCCCGTGGAGCTAAGGAGGACCCTCCTCAGCGGCAAGTGTGATAAAGGAAGTGGTGGAGTGTAAGGTGGTGATAGACGCAAAAGAAA GGGGGGTCAGATATATTGAGAAACAAAAACAAACACGTGAGCACTGAGCTGATGTATGTGATGTGATGTGTGTTTTCTGTTGGTTCCTTGTTGCCTTGCAATCTTGTGCGGCATTTGAGGTAAAGCGTTCGATTTTGAGGAGAAGCAAACGATGCAATAAATATGGAGAATCC]
[-] EMBL CNS093SO             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gcGATAGACGCAAAAGAAAGGGGGGGTCAAATATATTGAGAAACAAAAACAAACACGTGAGCACCAAGCTGATGTATGTGATGTGATGTGTGTTTTCTGTTGGTTCCTTGTTGCCTTccca                                                                        ]




>consensus_9308#0
CAGAATCGCACGAGGTTACTCAGAACTTCACCAGTGCTGTTCTAAGGTTCGCTTGTGCCC
ACCAAGTGTTTGTTTTCTTCTTCCCTGTACGAGACCCTCCCCACTCCAACTAGTAGCAAC
AGCAGTAGCTACCGCCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCTAAGC
ACTACCTCAGCATTACTAGCACACACACACCCTCCGTGCGCGTCTCCGGCCGTCCTTGGT
GGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTG
CTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGGAATGAGAGC
GATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTACGTACT
GGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCGTGC
CTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCG
ACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAGCCGAT
CAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACCAACTT
CCGGATCAGCGGTGCGACGCACGAGAAGACGGGGTTCATCGTGAAGAAGCTAAAAACCGA
TATTGACAATCGACAGATTAATGCCACCATCCTGCTGCCGAAGCTGCAGGTCAACTCGAA
GTACTCGCTGAAGATGAGCATTCTGGTGCTGCAGATCAATGGCGATGGTGATCTGCAGGT
GAATCTGACCGACACCNAGGTAAGCCTGAAGCTGACGTTCTACACGGAAACGGTCGACGG
GGAGGAGTACTTCCGCTTCAATCCGATCAATCTGCGCGTTAAGTTTGGCAAGGCACGGTT
CTATCTGAAGAATCTGTTCAACGGCGATCCGACGCTGGATATGATCGGCAATCAGGCGAT
CAACGAAAATCCGGACGTGCTGCTGGATGAGGTGAAGGGCGGCATTGAGGAGAATTTGGC
CAAACTGTTCACCAAGATTGCGAGCGAGGTGGTCAAGGATGCACTGTTCGAGGAGGTGTT
CCCGTGGAGCTAAGGAGGACCCTCCTCAGCGGCAAGTGTGATAAAGGAAGTGGTGGAGTG
TAAGGTGGTGATAGACGCAAAAGAAAGGGGGGTCAGATATATTGAGAAACAAAAACAAAC
ACGTGAGCACTGAGCTGATGTATGTGATGTGATGTGTGTTTTCTGTTGGTTCCTTGTTGC
CTTGCAATCTTGTGCGGCATTTGAGGTAAAGCGTTCGATTTTGAGGAGAAGCAAACGATG
CAATAAATATGGAGAATCC

consensusID : consensus_9308#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 760
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGGAACTTCACCAGTGCTGTTCTAAGGTTCGCTTGTGCCCACCAAGTGTTTGTTTTCTTTTTCCCTGTTCGAGACCCTCTCTACCCCAACCAGTAGCAACAGCAGTCGTTGCCACCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCCAAGCACTACCTCAGCATTACTGGCACACA-A-ACCCTCCGTGCGCCTCTCTAGTCGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGGAATGAGAGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTACGTACTGGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAGCCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACCAACTTCCCGGATCAGCGGTGCGACGCACGAGAAGACGGGCTTCATCGTGAAGAAGCTAAAGTAGGCGTTGGCGTTGAGATCGGGTTCGTCGCTTGCTAGATC]

[+] EMBL BM615615             [CCGCCCACGCGTCCGCCCACGCGTCCGGAACTTCACCAGTGCTGTTCTAAGGTTCGCTTGTGCCCACCAAGTGTTTGTTTTCTTTTTCCCTGTTCGAGACCCTCTCTACCCCAACCAGTAGCAACAGCAGTCGTTGCCACCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCCAAGCACTACCTCAGCATTACTGGCACACA A ACCCTCCGTGCGCCTCTCTAGTCGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGGAATGAGAGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTACGTACTGGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAGCCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACCAACTTCCCGGATCAGCGGTGCGACGCACGAGAAGACGGGCTTCATCGTGAAGAAGC                                              ]
[+] EMBL BM622383             [                        CCGGAACTTCACCAGTGCTGTTCTAAGGTTCGCTTGTGCCCACCAAGTGTTTGTTTTCTTTTTCCCTGTTCGAGACCCTCTCTACCCCAACCAGTAGCAACAGCAGTCGTTGCCACCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCCAAGCACTACCTCAGCATTACTGGCACACA A ACCCTCCGTGCGCCTCTCTAGTCGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGGAATGAGAGCGATGACAACGGGCAAGGCCGCCGCC                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM625776             [                           ccgCTTCACCAGTGCTGTTCTAAGGTTCGCTTGTGCCCACCAAGTGTTTGTTTTCTTTTTCCCTGTTCGAGACCCTCTCTACCCCAACCAGTAGCAACAGCAGTCGTTGCCACCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCCAAGCACTACCTCAGCATTACTGGCACACA A ACCCTCCGTGCGCCTCTCTAGTCGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGGAATGAGAGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTACGTACTGGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAGCCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACCAACTTCCGGGATCAGCGGTGCGACGCACGA                                                                        ]
[+] EMBL BX612853             [                                                AAGGTCCTTTTGTGCCCACCAAGTGTTTGTTTTCTTCTTCCCTGTACCATACCCTCCCCACTCCAACTAGTAGCAACAGCAGTAGCTACCGCCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTCTAAGCACTACCTCAGCATTACTAGCACACACACACCCTCCGTGCGCGTCTCCGGCCGTCCTTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGGAATGAGAGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTACGTACTGGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAGCCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACCAACTT CCGGATCAGCGGTGCGACGCACGAGAAGACGGGGTTCATCGTGAAGAAGCTAAAGTAGGCGTTGGCGTTGAGATCGGGTTCGTCGCTTGCTAGATC]




>consensus_9308#1
CCGCCCACGCGTCCGCCCACGCGTCCGGAACTTCACCAGTGCTGTTCTAAGGTTCGCTTG
TGCCCACCAAGTGTTTGTTTTCTTTTTCCCTGTTCGAGACCCTCTCTACCCCAACCAGTA
GCAACAGCAGTCGTTGCCACCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTC
CAAGCACTACCTCAGCATTACTGGCACACAAACCCTCCGTGCGCCTCTCTAGTCGTCCTT
GGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCCAA
CTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGGAATGAG
AGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTACGT
ACTGGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTGCG
TGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCT
GCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAGCC
GATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACCAA
CTTCCCGGATCAGCGGTGCGACGCACGAGAAGACGGGCTTCATCGTGAAGAAGCTAAAGT
AGGCGTTGGCGTTGAGATCGGGTTCGTCGCTTGCTAGATC

consensusID : consensus_9308#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 686
fasta sequence

                              [AATCGCCCGAGGTAAACGATGCAGCAACCAGCGTGGAGGTGTATCGTGCCGCCCAGTCGGTAGCGCTAGCCGCCGTGCTTGTCCTGCTGGCGGCGCATTACAGTGGTGCCGTGTTTCCTACCGTTTTGCGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAGCCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACCAACTTCCGGATCAGCGGTGCGACGCACGAGAAGACGGGCTTCATCGTGAAGAAGCTAAAAACCGATATTGACAATCGACAGATTAATGCCACCATACTGCTGCCGAAGCTGCAGGTCAACTCGAAGTACTCGCTGAAGATGAGCATTCTGGTGCTGCAGATCAATGGCGATGGTGATCTGCAGGTGAATCTGACCGACACCAAGGTAAGCCTGAAGCTGACGTTCTACACGGAAACGGTCGACGGGGAGGAGTACTTCCGCTTCAATCCGATCAATCTGCGCGTTAAGTTTGGCAAGGCACGGTTCTATCTGAAGAATCTGTTCAACGGCGATCCGACGCTGGAGATGATCGGCAATCAGGCGATCAACGAAAAATCC]

[+] EMBL AL933300             [AATCGCCCGAGGTAAACGATGCAGCAACCAGCGTGGAGGTGTATCGTGCCGCCCAGTCGGTAGCGCTAGCCGCCGTGCTTGTCCTGCTGGCGGCGCATTACAGTGGTGCCGTGTTTCCTACCGTTTTGCGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAGCCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACCAACTTCCGGATCAGCGGTGCGACGCACGAGAAGACGGGCTTCATCGTGAAGAAGCTAAAAACCGATATTGACAATCGACAGATTAATGCCACCATACTGCTGCCGAAGCTGCAGGTCAACTCGAAGTACTCGCTGAAGATGAGCATTCTGGTGCTGCAGATCAATGGCGATGGTGATCTGCAG                                                                                                                                                                                                   ]
[+] EMBL BM639103             [                                                                                        ccgGGTGCATTACAGTGGTGCCGTGTTTCCTACCGTTTTGCGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAGCTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAGCCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACCAACTTCCGGATCAGCGGTGCGACGCACGAGAAGACGGGCTTCATCGTGAAGAAGCTAAAAACCGATATTGACAATCGACAGATAAATGCCACCATCCTGCTGCCGAAGCTGCAGGTCAACTCGAAGTACTCGCTGAAGATGAGCATTCTGGTGCTGCAGATCAATGGCGATGGTGATCTGCAGGTGAATCTGACCGACACCAAGGTAAGCCTGAAGCTGACGTTCTACACGGAAACGGTCGACGGGGAGGAGTACTTCCGCTTCAATCCGATCAATCTGCGCGTTAAGTTTGGCAAGGCACGGTTCTATCTGAAGAATCTGTTCAACGGCGATCCGACGCTGGAGATGATCGGCAATCAGGCGATCAACGAAAAATCC]




>consensus_9308#2
AATCGCCCGAGGTAAACGATGCAGCAACCAGCGTGGAGGTGTATCGTGCCGCCCAGTCGG
TAGCGCTAGCCGCCGTGCTTGTCCTGCTGGCGGCGCATTACAGTGGTGCCGTGTTTCCTA
CCGTTTTGCGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGG
TGAACGAGCTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCT
CGCTCGAGCCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAA
ACTTTACCAACTTCCGGATCAGCGGTGCGACGCACGAGAAGACGGGCTTCATCGTGAAGA
AGCTAAAAACCGATATTGACAATCGACAGATTAATGCCACCATACTGCTGCCGAAGCTGC
AGGTCAACTCGAAGTACTCGCTGAAGATGAGCATTCTGGTGCTGCAGATCAATGGCGATG
GTGATCTGCAGGTGAATCTGACCGACACCAAGGTAAGCCTGAAGCTGACGTTCTACACGG
AAACGGTCGACGGGGAGGAGTACTTCCGCTTCAATCCGATCAATCTGCGCGTTAAGTTTG
GCAAGGCACGGTTCTATCTGAAGAATCTGTTCAACGGCGATCCGACGCTGGAGATGATCG
GCAATCAGGCGATCAACGAAAAATCC

consensusID : consensus_9308#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 158
fasta sequence

                              [GGAACGGCTGCTGAAAGTCGGCTACGTACTGGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCGGGTTAGCCTACCGTTATGCGTGCGTGTCTTTGCAACTCGACTGAACCGAACAAGTGCATCATCGAGGTGGTGAACGAGCTGCGACTTCGGC]

[+] EMBL BX608199             [GGAACGGCTGCTGAAAGTCGGCTACGTACTGGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCGGGTTAGCCTACCGTTATGCGTGCGTGTCTTTGCAACTCGACTGAACCGAACAAGTGCATCATCGAGGTGGTGAACGAGCTGCGACTTCGGC]




>consensus_9308#3
GGAACGGCTGCTGAAAGTCGGCTACGTACTGGTCAGTGTCGGGGCCATGATCACCCTCGT
CGGTGCGGGTTAGCCTACCGTTATGCGTGCGTGTCTTTGCAACTCGACTGAACCGAACAA
GTGCATCATCGAGGTGGTGAACGAGCTGCGACTTCGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9308#1      CCGCCCACGCGTCCGCCCACGCGTCCGGAACTTCACCAGTGCTGTTCTAAGGTTCGCTTG 60
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      -----CAGAATCGCACGAGGTTACTCAGAACTTCACCAGTGCTGTTCTAAGGTTCGCTTG 55
consensus_9308#2      ------------------------------------------------------------
                                                                                  

consensus_9308#1      TGCCCACCAAGTGTTTGTTTTCTTTTTCCCTGTTCGAGACCCTCTCTACCCCAACCAGTA 120
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      TGCCCACCAAGTGTTTGTTTTCTTCTTCCCTGTACGAGACCCTCCCCACTCCAACTAGTA 115
consensus_9308#2      ------------------------------------------------------------
                                                                                  

consensus_9308#1      GCAACAGCAGTCGTTGCCACCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTC 180
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      GCAACAGCAGTAGCTACCGCCAGCGTTTTATTAGGTGTTGCAAGTGTCGCAGCTTCTTTC 175
consensus_9308#2      ------------------------------------------------------------
                                                                                  

consensus_9308#1      CAAGCACTACCTCAGCATTACTGGCACACAAAC--CCTCCGTGCGCCTCTCTAGTCGTCC 238
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      TAAGCACTACCTCAGCATTACTAGCACACACACACCCTCCGTGCGCGTCTCCGGCCGTCC 235
consensus_9308#2      ------------------------------------------------------------
                                                                                  

consensus_9308#1      TTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCC 298
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      TTGGTGGCTCTTCAAGTGCGTGCGTGCGTGTGTTTGCTAGGCCAAGTTCAAACTAGCTCC 295
consensus_9308#2      ------------------------------------------------------------
                                                                                  

consensus_9308#1      AACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGGAATG 358
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      AACTGCTGCCACCGGCACACCAAAGTCGCACCGCGAAGGATCTTGCGGAGGATCGGAATG 355
consensus_9308#2      ----------------------------------------------AATCGCCCGAGGTA 14
                                                                                  

consensus_9308#1      AGAGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTAC 418
consensus_9308#3      -----------------------------------GGAACGGCTGCTGAAAGTCGGCTAC 25
consensus_9308#0      AGAGCGATGACAACGGGCAAGGCCGCCGCCAGCGTGGATCGGCTGCTGACAGTCGGCTAC 415
consensus_9308#2      AACGATGCAGCAACCAGCGTGGAGGTGTATCGTGCCGCCCAGTCGGTAGCGCTAGCCGCC 74
                                                          *  * *  * *     * * *  *

consensus_9308#1      GTACTGGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTG 478
consensus_9308#3      GTACTGGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCGGGTTAGCCTACCGTTATG 85
consensus_9308#0      GTACTGGTCAGTGTCGGGGCCATGATCACCCTCGTCGGTGCCGGTTTGCCTACCGTTTTG 475
consensus_9308#2      GTGCTTGTCC-TGCTGGCGGCGC-ATTAC----AGTGGTGCCGTGTTTCCTACCGTTTTG 128
                      ** ** ***  **  ** * *   ** **       ***** *  *  ********* **

consensus_9308#1      CGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAG 538
consensus_9308#3      CGTGCGTGTCTTTGCAACTCGACTGAACCGAACAAGTGCATCATCGAGGTGGTGAACGAG 145
consensus_9308#0      CGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAG 535
consensus_9308#2      CGTGCCTGTCCCCGCAACTCGACCGACCTGAACCAGTGCATCATCGAGGTGGTGAACGAG 188
                      ***** ****   ********** ** * **** **************************

consensus_9308#1      CTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAG 598
consensus_9308#3      CTGCGACTTCGGC----------------------------------------------- 158
consensus_9308#0      CTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAG 595
consensus_9308#2      CTGCGACCGCGGCTAGCGACGGGCGACTTTGGCGAAAACTTTACCATCACCTCGCTCGAG 248
                      *******  ****                                               

consensus_9308#1      CCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACC 658
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      CCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACC 655
consensus_9308#2      CCGATCAAGATCGACCGGCTGACGATCGAGCGGGGCGAAAACTTTAAGGCAAACTTTACC 308
                                                                                  

consensus_9308#1      AACTTCCCGGATCAGCGGTGCGACGCACGAGAAGACGGGCTTCATCGTGAAGAAGCTAAA 718
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      AACTTCC-GGATCAGCGGTGCGACGCACGAGAAGACGGGGTTCATCGTGAAGAAGCTAAA 714
consensus_9308#2      AACTTCC-GGATCAGCGGTGCGACGCACGAGAAGACGGGCTTCATCGTGAAGAAGCTAAA 367
                                                                                  

consensus_9308#1      G-TAGGCGTTGGCGTTGAGATCGGGTTCGTCGCTTGCTAGATC----------------- 760
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      AACCGATATTGACAATCGACAGATTAATGCCACCATCCTGCTGCCGAAGCTGCAGGTCAA 774
consensus_9308#2      AACCGATATTGACAATCGACAGATTAATGCCACCATACTGCTGCCGAAGCTGCAGGTCAA 427
                                                                                  

consensus_9308#1      ------------------------------------------------------------
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      CTCGAAGTACTCGCTGAAGATGAGCATTCTGGTGCTGCAGATCAATGGCGATGGTGATCT 834
consensus_9308#2      CTCGAAGTACTCGCTGAAGATGAGCATTCTGGTGCTGCAGATCAATGGCGATGGTGATCT 487
                                                                                  

consensus_9308#1      ------------------------------------------------------------
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      GCAGGTGAATCTGACCGACACCNAGGTAAGCCTGAAGCTGACGTTCTACACGGAAACGGT 894
consensus_9308#2      GCAGGTGAATCTGACCGACACCAAGGTAAGCCTGAAGCTGACGTTCTACACGGAAACGGT 547
                                                                                  

consensus_9308#1      ------------------------------------------------------------
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      CGACGGGGAGGAGTACTTCCGCTTCAATCCGATCAATCTGCGCGTTAAGTTTGGCAAGGC 954
consensus_9308#2      CGACGGGGAGGAGTACTTCCGCTTCAATCCGATCAATCTGCGCGTTAAGTTTGGCAAGGC 607
                                                                                  

consensus_9308#1      ------------------------------------------------------------
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      ACGGTTCTATCTGAAGAATCTGTTCAACGGCGATCCGACGCTGGATATGATCGGCAATCA 1014
consensus_9308#2      ACGGTTCTATCTGAAGAATCTGTTCAACGGCGATCCGACGCTGGAGATGATCGGCAATCA 667
                                                                                  

consensus_9308#1      ------------------------------------------------------------
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      GGCGATCAACGAAAATCCGGACGTGCTGCTGGATGAGGTGAAGGGCGGCATTGAGGAGAA 1074
consensus_9308#2      GGCGATCAACGAAAAATCC----------------------------------------- 686
                                                                                  

consensus_9308#1      ------------------------------------------------------------
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      TTTGGCCAAACTGTTCACCAAGATTGCGAGCGAGGTGGTCAAGGATGCACTGTTCGAGGA 1134
consensus_9308#2      ------------------------------------------------------------
                                                                                  

consensus_9308#1      ------------------------------------------------------------
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      GGTGTTCCCGTGGAGCTAAGGAGGACCCTCCTCAGCGGCAAGTGTGATAAAGGAAGTGGT 1194
consensus_9308#2      ------------------------------------------------------------
                                                                                  

consensus_9308#1      ------------------------------------------------------------
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      GGAGTGTAAGGTGGTGATAGACGCAAAAGAAAGGGGGGTCAGATATATTGAGAAACAAAA 1254
consensus_9308#2      ------------------------------------------------------------
                                                                                  

consensus_9308#1      ------------------------------------------------------------
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      ACAAACACGTGAGCACTGAGCTGATGTATGTGATGTGATGTGTGTTTTCTGTTGGTTCCT 1314
consensus_9308#2      ------------------------------------------------------------
                                                                                  

consensus_9308#1      ------------------------------------------------------------
consensus_9308#3      ------------------------------------------------------------
consensus_9308#0      TGTTGCCTTGCAATCTTGTGCGGCATTTGAGGTAAAGCGTTCGATTTTGAGGAGAAGCAA 1374
consensus_9308#2      ------------------------------------------------------------
                                                                                  

consensus_9308#1      -------------------------
consensus_9308#3      -------------------------
consensus_9308#0      ACGATGCAATAAATATGGAGAATCC 1399
consensus_9308#2      -------------------------