These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9311#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 990 fasta sequence [AAAAAGCTGCGGAATTCCTCGAGAACTGTTGGCCAACTGGATTCATTTGTAAACATTGTCGCGAAACGATTGCCCTGCGGCCCCCAAAACGATGGATC-TCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCAAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGA-TCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGAT-GCTGCTATAATAGCACTCGTAGCCGCCTTCCAC-ACAGTTAAAC-TTCCGACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACC-T-CGTTCGTGATGGTTGCTGGCCGCTTGATCGCGGATCCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGTGGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAACGGTCCGTGAAAAAGATGATTC-AAACCATGCAAAGAAAATCATCCAGCTGAACGCAAATGAAAATAAAACGATTAAGAATTGAAAAAAAAA-AAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTG] [-] EMBL CNS09KVA [AAAAAGCTGCGGAATTCCTCGAGAACTGTTGGCCTACTGGATTCATTTGTAAACATTGTCGCGAAACGATTG CCTGCGGCCCCCAAAACGATGGATC TCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCAAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCAGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGA TCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGAT GCTGCTATAATAGCACTCGTAGCCGCCTTCCAC ACAGTTAAAC TTCCGACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACC T CGTTCGTGATGGTTGCTGGCCGCTTGATCGCGGATCCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGTGGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAACGGTCCGTGAAAAAGATGATTC AAACCATGCAAAGAAAATAATCCAACTGAACGCAAATGAAAATAAA ] [-] EMBL CNS097VA [ CGGAATTCCTCGAGCACTGTTGGCCAACTGGATTCATTTGTAAACATTGTCGCGAAACGATTGGCCTGCGGCCCCCAAAACGATGGTTC TCAAAACGTTCAAATTGCTGCATCCTGTGAAGAACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAAAACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCAAGGCACGGCTTTCTCGTACCGAATGTCGTTCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGA TCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGAT GCTGCTATAATAGCACTCGTAGCCGCCTTCCAC ACAGTTAAAC TTCCGACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACC T CGTTCGTGATGGTTGCTGGCCGCTTGATCGCGGATCCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGTGGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAACGGTCCGTGAAAAAGATGATTC AAACCATGCAAAGAAAATCATCCAGCTGAACGCAAATGAAAATAAAACGATTGTGAATTG ] [-] EMBL CNS09AOM [ CTCGAGAACTGTTGGCCAACTGGATTCATTTGTAAACATTGTCGCGAAACGATTGCCCCGCGGCCCCCAAAACGATGGATC TCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCAACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCAAGGCACGGCTTTCTCGTACCGAATGTCGTTCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGA TCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGAT GCTGCTATAATAGCACTCGTAGCCGCCTTCCAC ACAGTTAAAC TTCCGACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACC T CGTTCGTGATGGTTGCTGGCCGCTTGATCGCGGATCCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGTGGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAACGGTCCGTGAAAAAGATGATTC AAACCATGCAAAGAAAATCATCCAG TGAACGCAAATTAAA ] [+] EMBL CNS09OXC [ aaaaGTAAACATTGTCGCGAAACGATTGCCCTGCGGCCCCCAAAACGATGGATC TCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAGCTGGCCACACCGAATGCGTTA CACCGGGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGA TCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGAT GCGGCTATAATAGCACTCGTAGCCGCTTTCCAC ACAGTAAAAC TTCCCACCATTCAATACAACAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACC T CGTTCGTGATGGTTGCTGGCCGCTTGATTGCGGATCCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGTGGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAACGGTCCGTGAAAAAGATGATTC TAACCATGCAAAGAAAATCATCCAGCTGAACGCAAATGAAAATAAAACGATTAAGAATTGAAAAAAAAA AAAAAAAAAAAAAAGGGCAAATGTGCCCGAGCTG] [+] EMBL CNS09KV9 [ ACATTGTCGCGAAACGATTGCCCTGCGGCCCCCAAAACGATGGATC TCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTA CCCCAAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCAGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGA TCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGAT GCTGCTATAATAGCACTCGTAGCCGCCTTCCAC ACAGTTAAAC TTCCGACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACC T CGTTCGTGATGGTTGCTGGCCGCTTGATCGCGGATCCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGTGGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAACGGTCCGTGAAAAAGATGATTC AAACCATGCAAAGAAAATCATCCAGCTGAACGCAAATGAAAATAAAACGATTAAGAATTGAAAAAAAAACAAAAAAAAAAAAAAGGCCACATGTGCTCGAG ] [+] EMBL CNS09MTU [ TCGCGAAACGATTGCGCTGCGGCCCCCAAAACGATGGATC TCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGTTCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTA CCCCAAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGA TCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGAT GCTGCTATAATAGCACTCGTAGCCGCCTTCCAC ACAGTTAAAC TTCCGACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACC T CGTTCGTGATGGTTGCTGGCCGCTTGATCGCGGATCCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGAT ] [+] EMBL CNS097V9 [ CGCG AACGATTGCCCTGCGGCCCCCAAAACGATGGATC TCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTA CCCCAAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGA TCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGAT GCTGCTATAATAGCACTCGTAGCCGCCTTCCAC ACAGTTAAAC TTCCGACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACC T CGTTCGTGATGGTTGCTGGCCGCTTGATCGCGGATCCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGTGGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAACGGTCCGTGAAAAAGATGATTC AAACCATGCAAAGAAAATCATCCAGCTGAACGCAAATGAAAATAAAACGATTTAGAATTG AAAAAAAA ACAAAAAAAAAAAAGGCCACATGTGC ] [+] EMBL CNS097D0 [ AACGATTGCCC GCGGCCCCCAAAACGATGGATC TCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAGCTGGCCACACCGAATGCGTTA CACCGGGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGAGTCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGAT GCGGCTATAATAGCACTCGTAGCCGCTTTCCAC ACAGTAAAAC TTCCCACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACC T CGTTCGTGATGGTTGCTGGCCGCTTGATTGCGGATCCGACCACCGAAGAA ] [+] EMBL BX624232 [ GCCCTGCGGCCCCCAAAACGATGGATCATCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCTCAAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGA TCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTATTATGTCTGGATCATGACGGATGCGTCTTAGAT GCTGCTATAATAGCACTCGTAGCCGCCTNCCAC ACAGTTAAACNTTCCGACCATTCAATACAATAGTGACACAGANGAAACGGAAGCAGAC ] [+] EMBL BM627393 [ ccgATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCGAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGA TCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGAT GCTGCTATAATAGCACTCGTAGCCGCTTTCCAC ACAGTAAATC TTCCCACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACC T CGTTCGTGATGGTTGCTGGCCGCTTGATCGCGGATCCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGTGGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAACGGTCCGTGAAAAAGATGATTCAAAACCATGCAAAGAAAATCATCCAGCTGAACGCGAATGAAAATAAAA ] [-] EMBL CNS09MTV [ TTAGATAGCTGCTATAATAGCACTCGTAGCCGCCTTCCACAACAGTTAAAC TTCCGACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACGGTTGACTGTGTGCCTGTAACGACCATACGTTCGTGATGGTTGCTGGCCGCTTGATCGCGGATCCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGTGGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAACGGTCCGTGAAAAAGATGATTC AAACCATGCAAAGAAAATCATCCAGCTGAACGCAAATGAAAA ] [-] EMBL CNS097D1 [ CCGACCACCGAAGAAGAAAAACTTGCGAGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGTGGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAA ] consensusID : consensus_9311#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 732 fasta sequence [GCGGCCCCCAAAACGATGGATCTCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCAAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGATCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTANTATGTCTGGATCATGACGGATGCGTCTTAGATGCTGCTATAATAGCACTCGTAGCCGCCTTCCACACAGTTAAACTTCCGACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACNGGTTGACTGTGTGCCTGTAACGACCTCGTTCGTGATGGTTGCTGGATATCATCTATCATCTTCCAGCCGCTTGATCGCGGATCCGACCACCGAAGAANAAAACTTGCGAGCACGACCTTAACGGTAACGGTNAGCGATGGCAAGATGAGC] [+] EMBL BX626303 [GCGGCCCCCAAAACGATGGATCTCAAAACGTTCAAATTGCTGCATCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCAAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGATCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTTTGTACTGCGATTTANTATGTCTGGATCATGACGGATGCGTCTTAGATGCTGCTATAATAGCACTCGTAGCCGCCTTCCACACAGTTAAACTTCCGACCATTCAATACAATAGTGACACAGAGGAAACGGAAGCAGACACATCCAGGCTTTTGCCGTTGACNGGTTGACTGTGTGCCTGTAACGACCTCGTTCGTGATGGTTGCTGGATATCATCTATCATCTTCCAGCCGCTTGATCGCGGATCCGACCACCGAAGAANAAAACTTGCGAGCACGACCTTAACGGTAACGGTNAGCGATGGCAAGATGAGC] consensusID : consensus_9311#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 625 fasta sequence [CTAGGCAGATCCCCGTTTAAGTACTACAAAGATTACTCCCNAAACACATTCGTNNCGATGGGCGCGAACTGGAAGAGCTGCGGCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGTGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCAAGGACACGGTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGGTCCACTGTCGGTACCCGTCCCNTGTNACACGCAGTTGCGATTGAGGCGTCAAGTTGTACAAGNCAAGTCGGTAGNCGTGGACGCGAATCAGGCTAAGTTGGCCCGCTAGTCATCTGAATTTGTAGCAGAGACACACTATANAGCATCTTCNGACCCCGGANCACGTCTGGTACTGAGTAGTTGCTGGACATATGGCGAGTTTAGGATACATTGTCTTGGGATCAATTGGAACGGGAATAGCAAGTCTNTANAGATTGCCTTGTTAATTAATTAAGGCACTTCTCGATTAGGCCCGNTCTTNTCCCAACAGCACANTTCACACAATCTATCCGAAACATTTCCANNTACAATATTAACGAGTNGAACAACAGAA] [+] EMBL AL695250 [CTAGGCAGATCCCCGTTTAAGTACTACAAAGATTACTCCCNAAACACATTCGTNNCGATGGGCGCGAACTGGAAGAGCTGCGGCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGTGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCAAGGACACGGTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGGTCCACTGTCGGTACCCGTCCCNTGTNACACGCAGTTGCGATTGAGGCGTCAAGTTGTACAAGNCAAGTCGGTAGNCGTGGACGCGAATCAGGCTAAGTTGGCCCGCTAGTCATCTGAATTTGTAGCAGAGACACACTATANAGCATCTTCNGACCCCGGANCACGTCTGGTACTGAGTAGTTGCTGGACATATGGCGAGTTTAGGATACATTGTCTTGGGATCAATTGGAACGGGAATAGCAAGTCTNTANAGATTGCCTTGTTAATTAATTAAGGCACTTCTCGATTAGGCCCGNTCTTNTCCCAACAGCACANTTCACACAATCTATCCGAAACATTTCCANNTACAATATTAACGAGTNGAACAACAGAA] consensusID : consensus_9311#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 519 fasta sequence [GCCCCAGGTGTTTNTCAAAACGTTCAAATTGCTGCATCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCAAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGATCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTAATGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGATGCTGCTATAATAGCACTCGNTAGCCGCCTTCCACACAGTTAAACTTCCGACCATTCAATA] [+] EMBL AL697563 [GCCCCAGGTGTTTNTCAAAACGTTCAAATTGCTGCATCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACTGGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGGATCCGCAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACACCGAATGCGTTAGCCCCAAGGCACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTATCGTCACCGTCGTACCGTCCCGGGCACCGTGCGATGAGGCTCAGGTGTACAGCCAATCGGTAGCGGACGCGATCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTCGCCCGGAAAGCTGGTATGGTGTAATGTACTGCGATTTAGTATGTCTGGATCATGACGGATGCGTCTTAGATGCTGCTATAATAGCACTCGNTAGCCGCCTTCCACACAGTTAAACTTCCGACCATTCAATA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9311#0 AAAAAGCTGCGGAATTCCTCGAGAACTGTTGGCCAACTGGATTCATTTGTAAACATTGTC 60 consensus_9311#1 ------------------------------------------------------------ consensus_9311#3 ------------------------------------------------------------ consensus_9311#2 ------------------------------------------------------------ consensus_9311#0 GCGAAACGATTGCCCTGCGGCCCCCAAAACGATGGATCTCAAAACGTTCAAATTGCTGCA 120 consensus_9311#1 ----------------GCGGCCCCCAAAACGATGGATCTCAAAACGTTCAAATTGCTGCA 44 consensus_9311#3 --------------------GCCCCA----GGTGTTTNTCAAAACGTTCAAATTGCTGCA 36 consensus_9311#2 -----------------------------------------------CTAGGCAGATCC- 12 * * * * consensus_9311#0 TCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACT 180 consensus_9311#1 TCCTGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACT 104 consensus_9311#3 TC-TGTGAAGTACTACAAAGATTACCTCGAAAACAACATTCGTCCCGATGGGCGCGAACT 95 consensus_9311#2 -CCGTTTAAGTACTACAAAGATTACTCCCNAAACA-CATTCGTNNCGATGGGCGCGAACT 70 * * ****************** * ***** ******* *************** consensus_9311#0 GGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATG-GATCCG 239 consensus_9311#1 GGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATG-GATCCG 163 consensus_9311#3 GGAAGAGCTGCGGCCACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATG-GATCCG 154 consensus_9311#2 GGAAGAGCTGCGGC-ACTGGCTATTAGCTTCGATGTGATCAAAAGCGCGGATGTGATCCG 129 ************** ************************************** ****** consensus_9311#0 CAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACAC 299 consensus_9311#1 CAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACAC 223 consensus_9311#3 CAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACAC 214 consensus_9311#2 CAATAGTGAAAGTGGGCAACACAACGGTAGTGTGCGGAATTAAGGCAGAACTGGCCACAC 189 ************************************************************ consensus_9311#0 CGAATGCGTTAGCCCCAAGG-CACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTA 358 consensus_9311#1 CGAATGCGTTAGCCCCAAGG-CACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTA 282 consensus_9311#3 CGAATGCGTTAGCCCCAAGG-CACGGCTTTCTCGTACCGAATGTCGATCTGTCACCGGTA 273 consensus_9311#2 CGAATGCGTTAGCCCCAAGGACACGG-TTTCTCGTACCGAATGTCGATCTGTCACCGGTA 248 ******************** ***** ********************************* consensus_9311#0 TCG--TCACCGTCG-TACC-GTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCA 414 consensus_9311#1 TCG--TCACCGTCG-TACC-GTCCCGGGCCACCGTGCGATGAGGCTCAGGTGTACAGCCA 338 consensus_9311#3 TCG--TCACCGTCG-TACC-GTCCCGGGC-ACCGTGCGATGAGGCTCAGGTGTACAGCCA 328 consensus_9311#2 TCGGTCCACTGTCGGTACCCGTCCCNTGTNACACGCAGTTGCGATTGAGGCGTCAAGTTG 308 *** *** **** **** ***** * ** * ** * * *** ** ** consensus_9311#0 ATCGGTAGCGGACGCGATCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTC 474 consensus_9311#1 ATCGGTAGCGGACGCGATCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTC 398 consensus_9311#3 ATCGGTAGCGGACGCGATCAGCAATGCCCGCTGCATCGATTTGCAGCAGCTTTGCATCTC 388 consensus_9311#2 TACA--AGNCAAGTCGGT-AGNCGTGGACGC-GAATCAGGCTA-AGTTGGCCCGCTAGTC 363 * ** * ** * ** ** *** * *** * ** * ** ** consensus_9311#0 GCCCGGAAAGCTGGTATGG-TGTT-TGTACTGCGATTTAGTATGTCTGGATCATGACGGA 532 consensus_9311#1 GCCCGGAAAGCTGGTATGG-TGTT-TGTACTGCGATTTANTATGTCTGGATCATGACGGA 456 consensus_9311#3 GCCCGGAAAGCTGGTATGG-TGTAATGTACTGCGATTTAGTATGTCTGGATCATGACGGA 447 consensus_9311#2 ATCTGAATTTGTAGCAGAGACACACTATANAGCATCTTCNGAC-CCCGGANCACGTCTGG 422 * * * * * * * * ** ** ** * * *** ** * * * consensus_9311#0 TGCGTCTTAGATGCTGCTATAATAGCACTCGT-AGCCGCCTTCCACACAGTTAAACTTC- 590 consensus_9311#1 TGCGTCTTAGATGCTGCTATAATAGCACTCGT-AGCCGCCTTCCACACAGTTAAACTTC- 514 consensus_9311#3 TGCGTCTTAGATGCTGCTATAATAGCACTCGNTAGCCGCCTTCCACACAGTTAAACTTC- 506 consensus_9311#2 TACTGAGTAGTTGCTGGACATATGGCGAGTTTAGGATACATTGTCTTGGGATCAATTGGA 482 * * *** ***** ** ** * * ** * * ** * consensus_9311#0 -CGACCATT-CAATACAATAGTGAC-ACAGAGGAAACGGAAGCAGACACATCCAGGCTTT 647 consensus_9311#1 -CGACCATT-CAATACAATAGTGAC-ACAGAGGAAACGGAAGCAGACACATCCAGGCTTT 571 consensus_9311#3 -CGACCATT-CAATA--------------------------------------------- 519 consensus_9311#2 ACGGGAATAGCAAGTCTNTANAGATTGCCTTGTTAATTAATTAAGGCACTTCTCGATTAG 542 ** ** *** consensus_9311#0 TGCCGTTGACGG-TTGACTGTGTGCCTGTAACGACCTCGTTCGTGATGGTTGCTGG---- 702 consensus_9311#1 TGCCGTTGACNGGTTGACTGTGTGCCTGTAACGACCTCGTTCGTGATGGTTGCTGGATAT 631 consensus_9311#3 ------------------------------------------------------------ consensus_9311#2 GCCCGNTCTTNTCCCAACAGCACANTTCACACAATCT-ATCCGAAACATTTCCANN---- 597 consensus_9311#0 -----------------CCGCTTGATCGCGGATCCGACCACCGAAGAAGAAAAACTTGCG 745 consensus_9311#1 CATCTATCATCTTCCAGCCGCTTGATCGCGGATCCGACCACCGAAGAANAAAA-CTTGCG 690 consensus_9311#3 ------------------------------------------------------------ consensus_9311#2 -----------------TACAATATTAACGAGTNGAACAACAGAA--------------- 625 consensus_9311#0 AGCACGACCTTAACGGTAACGGTAAGCGATGGCAAGATGAGCTTTTTCAACCAGTCCGGT 805 consensus_9311#1 AGCACGACCTTAACGGTAACGGTNAGCGATGGCAAGATGAGC------------------ 732 consensus_9311#3 ------------------------------------------------------------ consensus_9311#2 ------------------------------------------------------------ consensus_9311#0 GGCGATCCAATGGACAGCAGAACGCTTAAAAAGTGCACCGACAGTGCAATAAAACGCGAA 865 consensus_9311#1 ------------------------------------------------------------ consensus_9311#3 ------------------------------------------------------------ consensus_9311#2 ------------------------------------------------------------ consensus_9311#0 CGGTCCGTGAAAAAGATGATTCAAACCATGCAAAGAAAATCATCCAGCTGAACGCAAATG 925 consensus_9311#1 ------------------------------------------------------------ consensus_9311#3 ------------------------------------------------------------ consensus_9311#2 ------------------------------------------------------------ consensus_9311#0 AAAATAAAACGATTAAGAATTGAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCG 985 consensus_9311#1 ------------------------------------------------------------ consensus_9311#3 ------------------------------------------------------------ consensus_9311#2 ------------------------------------------------------------ consensus_9311#0 AGCTG 990 consensus_9311#1 ----- consensus_9311#3 ----- consensus_9311#2 ----- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||