These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9323#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1339 fasta sequence [CAATCATCGCTTGCTACGGGCTGGAACGTCTTCTCGAAGGTGGCGAACGTGGCGAAGGAGAACGCGCTCAAGTACGGCAGTATCGCCTCGCAAAAGGTAGTTGAAGTTTCTAGCACCGTTTCGGAGAAGGTTAAAGAAGGTTCGCTGCTGGAAGGCGTCGGCTCGCAAGTCTCAAACCTGGCGACGAAGGTGACAGAGGTGGGCCGTAAAGGATGGGGTGGTTTCGGTGGGCCGGGCAGTGGCAGCTACAGCACCCCGTCCGGCAGTAACGATCAGTACAGCAACATCTCGTCGGACAGCGGCGTGAGCAGTCCGATCAATGGCCGACAGCCGGGTGGCTACCAGCAACAGCGCGGCTCGACCGGCGGTTCCGGCC-GCCGGGACGAATCGTCCTGGTCGAACAACGGCTGGTCGAACGACAGTAACTCCAACAGTTTGCCTCAATCGTACCAGAACGGTGACAACGACGATGACGGCTGGAACGGGTTCGAGTCGTACTCGGGGCCAGCATCGTCCGGCCAGCGCACATCCGCATCGGCCGAGCTGATGGCCAACGTGGACGTGCGCAACGAAAATGGCCCCGATCGCCACGCCAGCAGCAAGTCCGGCAGTACGCGCCGCACAAGCAACGGGTCAGCGAACAG---ACATTCGGCCAAATCGTCTGGTGCCGCGGCCGGCATCGATGAGGACTTTGCCGCCCTTGATATTAAGAGTAACCGGGCGCCGAAAAGCAGCAGCACTTCCAAGAAGGCGAACAACAACCCGGAAGACGATCTGTGGAACATGCTGAACAATTAGGTGCAGAGGGAGGAGTGGGAACTGAGCGCGGACGCACGTCCCCTTCTTTCACACCTTCACAGTCGGAGTTGATGTGAATTTTAACGAATCAAACTATCGAAGAGGAAGAAAAAACAACCCTTTTGCCAGATATGACTTAAAGTAGTCCCCCGGA-GGGAGGTAGCGCGGAACTGGAGAGCGAGCGTTACACCCCGCGCGGGGACTGT--CTTGTCCCTTTCCGTAACGAGCATGTAATGTGAATGTGAATTGTGTAATCCAATGTATTATAAGCAGAAAAAAAAGAAAAAGTAGAAAAAACTGGTTCAAAACCGACCGATCGCCTATCCAAGGAGAAACACTCCCATCCCAGATCTGGTGGTAGATAAGCAAAATGAGAGAGATACAATTATATACAGTTATAGAAGTGCGAAAACATGCAGCAGTTGGGGAGAGAGAGAAAGAGATAAAAAAATAGGAGAAAAGGGGAAGAGATATATAATACGAAGAGACACACAAGAAAATGTAGGCGCTATATATATACACATATTCTATATTCTAGTAG] [+] EMBL BX628667 [CAATCATCGCTTGCTACGGGCTGGAACGTCTTCTCGAAGGTGGCGAACGTGGCGAAGGAGAACGCGCTCAAGTACGGCAGTATCGCCTCGCAAAAGGTAGTTGAAGTTTCTAGCACCGTTTCGGAGAAGGTTAAAGAAGGTTCGCTGCTGGAAGGCGTCGGCTCGCAAGTCTCAAACCTGGCGACGAAGGTGACAGAGGTGGGCCGTAAAGGATGGGGTGGTTTCGGTGGGCCGGGCAGTGGCAGCTACAGCACCCCGTCCGGCAGTAACGATCAGTACAGCAACATCTCGTCGGACAGCGGCGTGAGCAGTCCGATCAATGGCCGACAGCCGGGTGGCTACCAGCAACAGCGCGGCTCGACCGGCGGTTCCGGCC GCCGGGACGAATCGTCCTGGTCGAACAACGGCTGGTCGAACGACAGTAACTCCAACAGTTTGCCTCAATCGTACCAGAACGGTGACAACGACGATGACGGCTGGAACGGGTTCGAGTCGTACTCGGGGCCAGCATCGTCCGGCCAGCGCACATCCGCATCGGCCGAGCTGATGGCCAACGTGGACGTGCGCAACGAAAATGGCCCCGATCGCCACGCCAGCAGCAAGTCCGGCAGTACGCGCCGCACAAGCAACGGGCCAGCGAACAG ACATTCGGCCAAATCGTCTGGTGCCGCGGCCGGCATCGATGAGGACTTTGCCGCCCTTGATATTAAGAGTAACCGGGCGCCGAAAAGCAGCAGCACTTCCAAGAAGGCGAACAACAACCCGGAAGACGATCTGTGGAA ] [+] EMBL AL694220 [ agggTTNGGAGAAGGTT AAGAAGGTTCGCTGCTGGAAGGCGT GGCTCGCAAGTCTCAAACCTGGCGACGAAGGTGACAGAGGTGGGCCGTAAAGGATGGGGTGGTTTCGGTGGCCCGGGCAGTGGCAGCTACAGCACCCCGTCCGGCAGTAACGATCAGTACAGCAACATCTCGTCGGACAGCGGCGTGAGCAGTCCGATCAATGGCCGACAGCCGGGTGGCTACCAGCAACAGCGTGGCTCGACCGGCGGTTCCGGCCTGCCGGGACGAATCGTCCTGGTCGAACAACGGCTGGTCGAACGACAGTAACTCCAACAGTTTGCCTCAATCGTACCAGAACGGTGACAACGACGATGACGGCTGGAACGGGTTCGAGTCGTACTC GGGCCAGCATCGTCCGGC ] [+] EMBL BX621183 [ AACCTGGCGACGAAGGTGACAGAGGTGGGCCGTAAAGGATGGGGTGGTTTCGGTGGGCCGGGCAGTGGCAGCTACAGCACCCCGTCCGGCAGTAACGATCAGTACAGCAACATCTCGTCGGACAGCGGCGTGAGCAGTCCGATCAATGGCCGACAGCCGGGTGGCTACCAGCAACAGCGCGGCTCGACCGGCGGTTCCGGCC GCCGGGACGAATCGTCCTGGTCGAACAACGGCTGGTCGAACGACAGTAACTCCAACAGTTTGCCTCAATCGTACCAGAACGGTGACAACGACGATGACGGCTGGAACGGGTTCGAGTCGTACTCGGGGCCAGCATCGTCCGGCCAGCGCACATCCGCATCGGCCGAGCTGATGGCCAACGTGGACGTGCGCAACGAAAATGGCCCCGATCGCCACGCCAGCAGCAAGTCCGGCAGTACGCGCCGCACAAGCAACGGGCCAGCGAACAG ACATTCGGCCAAATCGTCTGGTGCCGCGGCCGGCATCGATGAGGACTTTGCCGCCCTTGATATTAAGAGTAACCGGGCGCCGAAAAGCAGCAGCACTTCCAAGAAGGCGAACAACAACCCGGAAGACGATCTGTGGAACATGCTGAACAATTAGGTGCAGAGGGAGGAGTGGGAACTGAGCGCGGACGCACGTCCCCTTCTTTCACACCTTCACAGTCGGAGTTGATGTGAATTTTAACGAATC AACTATCGAA ] [+] EMBL BM576032 [ ccgGATCAATGGCCGACAGCCGGGTGGCTACCAGCAACAGCGTGGCTCGACCGGCGGTTCCGGCC GCCGGGACGAATCGTCCTGGTCGAACAACGGCTGGTCGAACGACAGTAACTCCAACAGTTTGCCTCAATCGTACCAGAACGGTGACAACGACGATGACGGCTGGAACGGGTTCGAGTCGTACTCGGGGCCAGCATCGTCCGGCCAGCGCACATCCGCATCGGCCGAGCTGATGGCCAACGTGGACGTGCGCAACGAAAATGGCCCCGATCGCCACGCCAGCAGCAAGTCCGGCAGTACGCGCCGCACAAGCAACGGGTCAGCGAACAG ACATTCGGCCAAATCGTCTGGTGCCGCGGCCGGCATCGATGAGGACTTTGCCGCCCTTGATATTAAGAGTAACCGGGCGCCGAAAAGTAGCAGCAGTTCCAAGAAGGCGAACAACAACCCGGAAGACGATCTGTGGAACATGCTGAACAATTAGGTGCAGAGGGAGGAGTGGGAACTGAGCGCGGACGCACGTCCCCTTCTTTCACACCTTCACAGTCGGAGTTGATGTGAATTTTAACGAATCAAACTATCGAAGAGGAAGAAAAAACAACCCTTTTGCCAGATATGACTTAAAGTAGTCCCCCGGAGGGGAGGTAGC ] [+] EMBL BM604850 [ ccgCGGCGGTTCCGGCC GCCGGGACGAATCGTCCTGGTCGAACAACGGCTGGTCGAACGACAGTAACTCCAACAGTTTGCCTCAATCGTACCAGAACGGTGACAACGACGATGACGGCTGGAACGGGTTCGAGTCGTACTCGGGGCCAGCATTGTCCGGCCAGCGCACATCTGCCTCGGCCGAGCTGATGGCCAACGTGGACGTGCGCAACGAAAATGGCCCCGATCGCCACGCCAGCAGCAAGTCCGGCAGTACGCGCCGCACAAGCAACGGATCGGCGAACAGACAACATTCGACGAAAGCGTCTGGTGCCGCGGCCGGTATCGATGAGGACTTTGCCGCCCTTGATATTAAGAGTAACCGGGCGCCGAAAAGCAGCAGCACTTCCAAGAAGGCGAACAACAACCCGGAAGACGATCTGTGGAACATGCTGAACAATTAGGTGCAGAGGGAGGAGTGGGAACTGAGCGCGGACGCACGTCCCCTTCTTTCACACCTTTACAGTCGGAGTTGATGTGAATTTTAACGAATCAAACTATCGAAGAGGAAGAAAAAACAACCCTTTTGCCAGATATGACTTAAAGTAGTCCCCCc ] [+] EMBL BX605390 [ GCATCGTCCGGCCAGCGCACATCCGCATCGGCCGAGCTGATGGCCAACGTGGACGTGCGCAACGAAAATGGCCCCGATCGCCACGCCAGCAGCAAGTCCGGCAGTACGCGCCGCACAAGCAACGGGTCGGCGAACAGACAACATTCGGCGAAAGCGTCTGGTGCCGCGGCCGGCATCGATGAGGACTTTGCCGCCCTTGATATTAAGAGTAACCGGGCGCCGAAAAGCAGCAGCACTTCCAAGAAGGCGAACAACAACCCGGAAGACGATCTGTGGAACATGCTGAACAATTAGGTGCAGAGGGAGGGGCGGGAACTGAGCGCGGACGCACGTCCCCTTCTTTCACACCTTCACAGTCGGAGTTGATGTGAATTTTAACGAATCAAACTATCGAAGAGGAAGAAAAAACAACCCTTTTGCCAGATATGACTTAAAGTAGTCCCCCGGA GGGAGGTAGCGCGGAACTGGAGAGCGAGCGTTACACCCCGCGCGGGGACTGTCCCTTGTCCCTTTCCGTAACGAGCATGTAATGTGAATGTGAATTGTGTAATCCAATGTATTATAAGCAGAA ] [-] EMBL AGA283450 [ cCCAAGAAGGCGACCACCAACCCGGAAGACAATCTGTGGAACATGCTGAACAATTAGGTGCAGAGGGAGGAGTGGGAACTGAGCGCGGACGCACGTCCCCTTCTTTCACACCTTCACAGTCGGAGTTGATGTGAATTTTAACGAATCAAACTATCGAAGAGGAAGAAAAAACAACCCTTTTGCCAGATATGACTTAAAGTAGTCCCCCGGA GGGAGGTAGCGCGGAACTGCAGGGCGAGCGTTACACCCCGCGCGGGGACTGT GTTGTCCCTTTCCGTAACGAGCATGTAATGTGAATGTGAATTGTGTAATCCAATGTATTATAAGCAAAAAAAA ] [+] EMBL BM652584 [ ccgCGAGCATGTAATGTGAATGTGAATTGTGTAATCCAATGTATTATAAGCAGAAGAAGAAGAAAAAGTAGAAAAAACTGGTTCAAAACCGACCGATCGCCTATCCAAGGAGAAACACTCCCATCCCAGATCTGGTGGTAGATAAGCAAAATGAGAGAGATACAATTATATACAGTTATAGAAGTGCGAAAACATGCAGCAGTTGGGGAGAGAGAGAAAGAGATAAAAAAATAGGAGAAAAGGGGAAGAGATATATAATACGAAGAGACACACAAGAAAATGTAGGCGCTATATATATACACATATTCTATATTCTAGTAG] consensusID : consensus_9323#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 913 fasta sequence [GCTACGTGTACGAGTGAAGGTTTCCACCGTTTGTTAGGCTCCAAATTCACCCCCACCCCCTCCTCTTCACTTATCTGGCATCTGGATCTGTCTCGAGTGCTCGGGCAAGCACCGCGGCCTCGGTGTGCATCTGTCCTTCGTGCGGTCCGTGTCGATGGACAAGTGGAAGGACATCGAGCTGGAGAAGATGAAGGTGGGCGGCAATCGGAAGGCGAGAGAGTTTCTCGACGCGCAGGACGACTGGGACGAGACGATGCCGATCCAGCGGAAGTACAGTACGCGAGCGGCTGCCCTGTACCGCGATCGGATTAGTACGCTGGCCCAGGGACAGCCGTGGGATGAGTCGGGTGCGCTGGCACGCGTGAACGGATCGGGCGGGTATGCGGCGAGCGGCAGCAGCGGTGGATCGACCGGCTCGATGACACATTCCAGAAGCAGTGGCTCGATGGGTGGTGGCAGTGGTGCTGGTGGCAAC---GGTGGCTACCAGAATGGAGGTGACAATTACTACCAGGACGGGGGAAGCTACCAGCAGTACCAGACGCCCGAGTTTAAGGCGCAGAAGGAAGATTTCTTCAGCCGCAAGCAGGAGGAAAACGCTGCCAGACCAGAAAACTTGCCACCGAACCAGGGCGGAAAGTATGCCGGTTTCGGATACACCATGGATCCACCG-CCAGAAGTCAATCACACGAGCTTTTCGACACGGTGCAATCATCGCTTGCTACGGTGCTGGAACGTCTTCTCGAAGGTGGCGAACGTGGCGAAGGAGAACGCGCTCAAGTACGGCAGTATCGCCTCGCAAAAGGTGACAGAGGTGGGCCGTAAA-GGATGGGGT-GGTTTCGGTGGCCCGGGCAGTGGCAGCTACAGCACCCCGTCCGGCAGTAACGATCAGTACAGCAACATCTCGTCGGACAGC] [+] EMBL BX621877 [GCTACGTGTACGAGTGAAGGTTTCCACCGTTTGTTAGGCTCCAAATTCACCCCCACCCCCTCCTCTTCACTTATCTGGCATCTGGATCTGTCTCGAGTGCTCGGGCAAGCACCGCGGCCTCGGTGTGCATCTGTCCTTCGTGCGGTCCGTGTCGATGGACAAGTGGAAGGACATCGAGCTGGAGAAGATGAAGGTGGGCGGCAATCGGAAGGCGAGAGAGTTTCTCGACGCGCAGGACGACTGGGACGAGACGATGCCGATCCAGCGGAAGTACAGTACGCGAGCGGCTGCCCTGTACCGCGATCGGATTAGTACGCTGGCCCAGGGACAGCCGTGGGATGAGTCGGGTGCGCTGGCACGCGTGAACGGATCGGGCGGGTATGCGGCGAGCGGCAGCAGCGGTGGATCGACCGGCTCGATGACACATTCCAGAAGCAGTGGCTCGATGGGTGGTGGCAGTGGTGCTGGTGGCAACGGTGGTGGCTACCAGAATGGAGGTGACAATTACTACCAGGACGGGGGAAGCTACCAGCAGTACCAGACGCCCGAGTTTAAGGCGCAGAAGGAAGATTTCTTCAGCCGCAAGCAGGAGGAAAACGCTGCCAGACCAGAA ] [+] EMBL AL933223 [ ccgaggttACGCGCAGGACGACTGGGACGAGACGATGCCGATCCAACGGAAGTACAGTACGCGAGCGGCTGCCCTGTACCGCGATCGGATTAGTACGCTGGCCCAGGGACAGCCGTGGGATGAGTCGGGTGCGCTGGCACGCGTGAACGGATCGNGCGGGTATGCGGCGAGCGGCAGTAGCGGTGGATCGACCGGCTCGATGACACATTCCAGAAGCAGTGGCTCGATGGGTGGTGGCAGTGGTGCTGGTGGCAAC GGTGGCTACCAGAATGGAGGTGACAATTACTACCAGGACGGGGGAAGCTACCAGCAGTACCAGACGCCCGAGTTTAAGGCGCAGAAGGAAGATTTCTTCAGCCGCAAGCAGGAGGAAAACGCTGCCAGACCAGAAAACTTGCCACCGAACCAGGGCGGAAAGTATGCCGGTTTCGGATACACCATGGATCCACCG CCAGAAGTCAATCACACGAGCTTTTCGACACGGTGCAATCATCGCTTGCTACGGTGCTGGAACGTCTTCTCGAAGGTGGCGAACGTGGCGAAGGAGAACGCGCTCAAGTACGGCAGTATCGCCTCGCAAAAGGTGACAGAGGTGGGCCGTAAA GGATGGGGT GGTTTCGGTGG ] [+] EMBL BM581305 [ ccGGCACGCGTGAACGGATCGGGCGGGTATGCGGCGAGTGGCAGCAGCGGTGGATCGTCCGGCTCGATGACACATTCCAGAAGCAGTGGCTCGATGGGTGGTGGTAGTGGGGCTGGTGGCAAC GGTGGTTACCAGAATGGAGGGGACAATTACTACCAGGACGGAGGAAGCTACCAGCAGTACCAGACGCCCGAGTTTAAGGCGCAGAAGGAAGATTTCTTCAGCCGCAAGCAGGAGGAAAACGCTGCCAGACCAGAAAACTTGCCACCGAACCAGGGCGGAAAGTATGCCGGCTTCGGATACACCATGGATCCACCGCCCAGAAGTCAATCACACGAGCTTTTCGACACGGTGCAATCATCGCTTGCTACGG GCTGGAACGTCTTCTCGAAGGTGGCGAACGTGGCGAAGGAGAACGCGCTCAAGTACGGCAGTATCGCCTCGCAAAAGGTGACAGAGGTGGGCCGTAAAGGGATGGGGTGGGTTTCGGTGGCCCGGGCAGTGGCAGCTACAGCACCCCGTCCGGCAGTAACGATCAGTACAGCAACATCTCGTCGGACAGC] consensusID : consensus_9323#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 760 fasta sequence [CCGGGAAAATTGATTTCTTTGCCACAAAACAATCGCTGAGTTAATGTGTAACATATTTCGGTGCAAAATCTACCCCGGCAAGGCATGACCGCGAACGGAAAAGGCGTCTTTGCTGGCGTTCGGTGAAAGAGCGTGTGCGAGTGTGCGTGTGCGTGTGTTTGTGTGCTACTGGCTGGTGAAAGTACGGCGCTGCAGCACTAGGAGAAGGAGAAGGTCTGTGGGAAAACCACGGCAGCATCTGCTCTCGACCCCACCACCCTTGCTAGCGTTTTGGCCTTTTTTTTCCTTCCGATCAACAATAGCGGTCGATTGTTGGGATATATTGTGTGTTGTTGCCGTGGTGTCGTATCTGTTCCCAAAGTCCTGACCGTGCTACGTGTACGAGTGAAGGTTTCCACCGTTTGTTAGGCTCCAAATTCACCCCCTC-CCCCCTCACCCATCTGTCATCATGGCCAGTCCACGTACGCGACGAGTTCTGAGCGAGCTGAAACCATCGGACGGCAACAACAAATGCTTCGAATGTGGCACCCACAACCCCCAATGGGTCTCGGTGACGTACGGCATCTGGATCTGTCTCGAGTGCTCGGGCAAGCACCGCGGCCTCGGTGTGCATCTGTCCTTCGTGCGGTCCGTGTCGATGGACAAGTGGAAGGACATCGAGCTGGAGAAGATGAAGGTGGGCGGCAATCGGAAGGCGAGAGAGTTTCTCGACGCGCAGGACGACTGGGACGAGACGATGCCGATCCAGCGGAAGTACAGT] [+] EMBL BM624282 [CCGGGAAAATTGATTTCTTTGCCACAAAACAATCGCTGAGTTAATGTGTAACATATTTCGGTGCAAAATCTACCCCGGCAAGGCATGACCGCGAACGGAAAAGGCGTCTTTGCTGGCGTTCGGTGAAAGAGCGTGTGCGAGTGTGCGTGTGCGTGTGTTTGTGTGCTACTGGCTGGTGAAAGTACGGCGCTGCAGCACTAGGAGAAGGAGAAGGTCTGTGGGAAAACCACGGCAGCATCTGCTCTCGACCCCACCACCCTTGCTAGCGTTTTGGCCTTTTTTTTCCTTCCGATCAACAATAGCGGTCGATTGTTGGGATATATTGTGTGTTGTTGCCGTGGTGTCGTATCTGTTCCCAAAGTCCTGACCGTGCTACGTGTACGAGTGAAGGTTTCCACCGTTTGTTAGGCTCCAAATTCACCCCCTC CCCCCTCACCCATCTGTCATCATGGCCAGTCCACGTACGCGACGAGTTCTGAGCGAGCTGAAACCATCGGACGGCAACAACAAATGCTTCGAATGTGGCACCCACAACCCCCAATGGGTCTCGGTGACGTACGGCATCTGGATCTGTCTCGAGTGCTCGGGCAAGCACCGCGGCCTCGGTGTGCATCTGTCCTTCGTGCGGTCCGTGTCGATGGACAAGTGGA ] [+] EMBL BM643043 [CCGGGAAAATTGATTTCTTTGCCACAAAACAATCGCTGAGTTAATGTGTAACATATTTCGGTGCAAAATCTACCCCGGCAAGGCATGACCGCGAACGGAAAAGGCGTCTTTGCTGGCGTTCGGTGAAAGAGCGTGTGCGAGTGTGCGTGTGCGTGTGTTTGTGTGCTACTGGCTGGTGAAAGTACGGCGCTGCAGCACTAGGAGAAGGAGAAGGTCTGTGGGAAAACCACGGCAGCATCTGCTCTCGACCCCACCACCCTTGCTAGCGTTTTGGCCTTTTTTTTCCTTCCGATCAACAATAGCGGTCGATTGTTGGGATATATTGTGTGTTGTTGCCGTGGTGTCGTATCTGTTCCCAAAGTCCTGACCGTGCTACGTGTACGAGTGAAGGTTTCCACCGTTTGTTAGGCTCCAAATTCACCCCCTC CCCCCTCACCCATCTGTCATCATGGCCAGTCCACGTACGCGACGAGTTCTGAGCGAGCTGAAACCATCGGACGGCAACAACAAATGCTTCGAATGTGGCACCCACAACCCCCAATGGGTCTCGGT ] [+] EMBL AGA284745 [ ACGAGTGAAGGTTTCCACCGTTTGTTAGGGTCTAAATTCACCCCCCCTCCTCTTCACTTATCTGTCATCATGGCCAGTCCACGTACGCGACGAGTTCTGAGCGAGCTGAAACCATCGGATGGCAACAACAAATGCTTCGAATGTGGCACCCACAACCCCCAGTGGGTCTCGGTGACGTACGGCATCTGGATCTGTCTCGAGTGCTCGGGCAAGCACCGCGGGCTCGGTGTGCATCTGTCCTTCGTGCGGTCCGTGTCGATGGACAAGTGGAAGGACATCGAGCTGGAGAAGATGAAGGTGGGCGGCAATCGGAAGGCGAGAGAGTTTCTCGACGCGCAGGACGACTGGGACGAGACGATGCCGATCCAGCGGAAGTACAGT] consensusID : consensus_9323#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 527 fasta sequence [CCAGATTCCCGAGTTATGTATATTTTGTGTTGGTCTACATGTGTGGGGAGGAAAATTGATTCTTTGCACAAACAATCGCTGAGTTAATGTGTACATATTTCGGTGCAAAATCTAACCCGGAGGCATGANCGCGAACGGAAAAGGCGTCTTTGCTGGCGTTCGGTGAAAGAACGTGTGCGAATGTNCGTGTGTGTGTTCGTATGCTACTGGCTGGTGAAAGTACNGTCTTGCAGGCACTAGGGANAAAGGAGAAGGGGCCTGTGGGGAAAAAACACGGCAGCCATCTGGTCTCGAATCCCAACAACACCTTGGAGTAAAGCAGTTATTTCGAGGCCTATATATTATCCCTTTTTCGGAATCCAACCAAATAAGGCGGNGTACCGACTTGGTGGGGAATAATAATGGTGGTGGTTGTATGGCCGGTGGGGTNGGTACGCTATTCNTGGTTCCCCAACAGTTCCTGACCGGTTGCTAACGTTGTACGAACGTTGCANCGTTTCCAACCGTATGATTAGGGCTACCAAAAT] [+] EMBL AL695201 [CCAGATTCCCGAGTTATGTATATTTTGTGTTGGTCTACATGTGTGGGGAGGAAAATTGATTCTTTGCACAAACAATCGCTGAGTTAATGTGTACATATTTCGGTGCAAAATCTAACCCGGAGGCATGANCGCGAACGGAAAAGGCGTCTTTGCTGGCGTTCGGTGAAAGAACGTGTGCGAATGTNCGTGTGTGTGTTCGTATGCTACTGGCTGGTGAAAGTACNGTCTTGCAGGCACTAGGGANAAAGGAGAAGGGGCCTGTGGGGAAAAAACACGGCAGCCATCTGGTCTCGAATCCCAACAACACCTTGGAGTAAAGCAGTTATTTCGAGGCCTATATATTATCCCTTTTTCGGAATCCAACCAAATAAGGCGGNGTACCGACTTGGTGGGGAATAATAATGGTGGTGGTTGTATGGCCGGTGGGGTNGGTACGCTATTCNTGGTTCCCCAACAGTTCCTGACCGGTTGCTAACGTTGTACGAACGTTGCANCGTTTCCAACCGTATGATTAGGGCTACCAAAAT] consensusID : consensus_9323#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 158 fasta sequence [ATTGCCAGATATCACATAAAGTTGTCCCCCGGAGGGAGTTCGCGCGGAACTGCAGGGCGAGTGTCACACCCCGCGCGGAGACTGTGTTCTCCCTTGCCGTAAAGAGCATGTAATGTGAATGTGAAGTGTGTAATCCAATGTATTATAAGCAAAAAACA] [-] EMBL AGA283454 [ATTGCCAGATATCACATAAAGTTGTCCCCCGGAGGGAGTTCGCGCGGAACTGCAGGGCGAGTGTCACACCCCGCGCGGAGACTGTGTTCTCCCTTGCCGTAAAGAGCATGTAATGTGAATGTGAAGTGTGTAATCCAATGTATTATAAGCAAAAAACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9323#2 ------------------------------------------------------------ consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 CAATCATCGCTTGCTACGGGCTGGAACGTCTTCTCGAAGGTGGCGAACGTGGCGAAGGAG 60 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 ------------------------------------------------------------ consensus_9323#2 ------------------------------------------------------------ consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 AACGCGCTCAAGTACGGCAGTATCGCCTCGCAAAAGGTAGTTGAAGTTTCTAGCACCGTT 120 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 ------------------------------------------------------------ consensus_9323#2 ------------------------------------------------------------ consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 TCGGAGAAGGTTAAAGAAGGTTCGCTGCTGGAAGGCGTCGGCTCGCAAGTCTCAAACCTG 180 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 ------------------------------------------------------------ consensus_9323#2 ------------------------------------------------------------ consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 GCGACGAAGGTGACAGAGGTGGGCCGTAAAGGATGGGGTGGTTTCGGTGGGCCGGGCAGT 240 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 ------------------------------------------------------------ consensus_9323#2 ------------------------------------------------------------ consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 GGCAGCTACAGCACCCCGTCCGGCAGTAACGATCAGTACAGCAACATCTCGTCGGACAGC 300 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 ------------------------------------------------------------ consensus_9323#2 ------------------------------------------------------------ consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 GGCGTGAGCAGTCCGATCAATGGCCGACAGCCGGGTGGCTACCAGCAACAGCGCGGCTCG 360 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 ------------------------------------------------------------ consensus_9323#2 ------------------------------------------------------------ consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 ACCGGCGGTTCCGGCCGCCGGGACGAATCGTCCTGGTCGAACAACGGCTGGTCGAACGAC 420 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 ------------------------------------------------------------ consensus_9323#2 ------------------------------------------------------------ consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 AGTAACTCCAACAGTTTGCCTCAATCGTACCAGAACGGTGACAACGACGATGACGGCTGG 480 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 ----------------------------GCTACGTGTACGAGTGAAGGTTTCCACCGTTT 32 consensus_9323#2 ------------------------------------------------------------ consensus_9323#3 ---------------------------------------------CCAGATTCCCGAGTT 15 consensus_9323#0 AACGGGTTCGAGTCGTACTCGGGGCCAGCATCGTCCGGCCAGCGCACATCCGCATCGGCC 540 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 GTTAGGCTCCAAATTCACCCCCACCCCCTCCTCTTCACTTATCTGGCATCTGGATCTGTC 92 consensus_9323#2 -------------------------------CCGGGAAAATTGATTTCTTTGCCACAAAA 29 consensus_9323#3 ATGTATATTTTGTGTTGGTCTACATGTGTGGGGAGGAAAATTGATT-CTTTGC-ACAAA- 72 consensus_9323#0 GAGCTGATGGCCAACGTGGACGTGCGCAACGAAAATGGCCCCGATCGCCACGCCAGCAGC 600 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 TCGAGTGCTCGGGCAAGCACCGCGGCCTCGGTGTGCATCTGTCCTTCGTGCGGTCCGTGT 152 consensus_9323#2 CAATCGCTGAGTTAATGTGTAACATATT----TCGGTGCAA--AATCTACCCCGGCAAGG 83 consensus_9323#3 CAATCGCTGAGTTAATGTGTA-CATATT----TCGGTGCAA--AATCTAACCCGG--AGG 123 consensus_9323#0 AAGTCCGGCAGTACGCGCCGCACAAGCA----ACGGGTCAGCGAACAGACATTCGGCCAA 656 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 CGATGGACAAGTGGAAGGACATCGAGCTGGAGAAGATGAAGGTGGGCGGCAATCGGAAGG 212 consensus_9323#2 CATGACCGCG----AACGGAAAAGGCGTCTTTGCTGGCGTT-CGGTGAAAGAGCGTGTGC 138 consensus_9323#3 CATGANCGCG----AACGGAAAAGGCGTCTTTGCTGGCGTT-CGGTGAAAGAACGTGTGC 178 consensus_9323#0 ATCGTCTGGT----GCCGCGGCCGGCATCGATGAGGACTTTGCCGCCCTTGATATTAAGA 712 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 CGAGAGAGTTTCTCGACGCGCAGGACGACTGGGACGAGACGATGCCGATCCAGCGGAAGT 272 consensus_9323#2 GAGTGTGCGTGTGCGTGTGTTTGTGTGCTACTGGCTGGTGAAAGTACGGCGCTGCAG-CA 197 consensus_9323#3 GAATGTNCGTGTG--TGTGTTCGTATGCTACTGGCTGGTGAAAGTACNGTCTTGCAGGCA 236 consensus_9323#0 GTAACCGGGCGCCGAAAAGCAGCAGCACTTCCAAGAAGGCGAACAACAACCCGGAAGACG 772 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 ACA-GTACGCGAGCGGCTGCCC-TGTACCGCGATCGGATTAGTACGCTGGCCCAGGGACA 330 consensus_9323#2 CTAGG--AGAAGGAGAAG--GTCTGTGGG--AAAACCACGGCAGC-ATCTGCTCTCGACC 250 consensus_9323#3 CTAGGGANAAAGGAGAAGGGGCCTGTGGGGAAAAAACACGGCAGCCATCTGGTCTCGAAT 296 consensus_9323#0 ATCTGTGGAACATGCTGAACAATTAGGTGCAGAGGGAGGAGTGGG-AACTGAGCGCGGAC 831 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 GCCGTGGGATGAGTCGGGTGCGCTGGCACGCGTGAACGGATCGGGCGGGTATGCGGCGAG 390 consensus_9323#2 CCACCACCCTTGCTAGCGTTTTGGCCTTTTTTTTCCTTCCGATCAACAATAGCGGTCGAT 310 consensus_9323#3 CC-CAACAACACCTTGGAGTAAAGCAGTTATTTCGAGGCCTAT-----ATATTATCCCTT 350 consensus_9323#0 GCACGTCCCCTTCTTTCACACCTTCACAGTCGGAGTTGATGTGAATTTTAACGAATCAAA 891 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 CGGCAGCAGCGGTGGATCGACCGGCTCGATGACACATTCCAGA----AGCAGTGGCTCGA 446 consensus_9323#2 TGTTGGGATATATTGTGTGTTGTTGCCGTGGTGTCGTATCTGTTCCCAAAGTCCTGACCG 370 consensus_9323#3 TTTCGGAATCCAAC-----CAAATAAGGCGGNGTACCGACTTGGTGGGGAATAATAATGG 405 consensus_9323#0 CTATCGAAGAGGAAGAA--AAAACAACCCTTTTGCCAGATATGACTTAAAGTAGTC-CCC 948 consensus_9323#4 ------------------------------ATTGCCAGATATCACATAAAGTTGTC-CCC 29 consensus_9323#1 TGGGTGGTGGCAGTGGTGCTGGTGGCAACGGTGGCT--ACCAGAATGGAGGTGACA--AT 502 * consensus_9323#2 TGCTACGTGTACGAGTGAAGGTTTCCACCGTTTGTTAGGCTCCAAATTCACCCCCTCCCC 430 consensus_9323#3 TGGTGGTTGTATGGCCGGTGGGGTNG---GTACGCTA--TTCNTGGTTC--CCCAACAGT 458 consensus_9323#0 CGGAGGGAGGTAGCGCGGAACTGGAGAGCGAGCGTTACACCCCGCGCGGGGACTGTCTTG 1008 consensus_9323#4 CGGAGGGAGTTCGCGCGGAACTGCAGGGCGAGTGTCACACCCCGCGCGGAGACTGTGTTC 89 consensus_9323#1 TACTACCAGGACGGGGGAAGCTACCAGCAGTACCAGACGCCCGAGTTTAAGGCGCAGAAG 562 * * * * * * * consensus_9323#2 CCTCACCCATCTGTCATCATGGCCAGTCCACGTACGCGAC--GAGTTCTGAGCGAGCTGA 488 consensus_9323#3 TCCTGACCGGTTGCTAACGTTGT------ACGAACGTTGC--ANCGTTT---CCAACCGT 507 consensus_9323#0 TCCCTTTCCGTAACGAGCATGTAA----TGTGAATGTGA---ATTGTGTAATCCAA-TGT 1060 consensus_9323#4 TCCCTTGCCGTAAAGAGCATGTAA----TGTGAATGTGA---AGTGTGTAATCCAA-TGT 141 consensus_9323#1 GAAGATTTCTTCAGCCGCAAGCAGGAG--GAAAACGCTGCCAGACCAGAAAACTTGCCAC 620 * * * * consensus_9323#2 AACCATCGGACGGCAACAACAAATGCTTCGAATGTGGCACCCACAACCCCCAATGGGTCT 548 consensus_9323#3 ATGATTAGGGCTACCAAAAT---------------------------------------- 527 consensus_9323#0 ATTATAAGCAGAAAAAAAAGAAAAAGTAGAAAAAACTGGTTCAAAACCGACCGATCGCCT 1120 consensus_9323#4 ATTATAAGCAAAAAACA------------------------------------------- 158 consensus_9323#1 CGAACCAGGGCGGAAAGTATGCCGGTTTCGGATACACCATGGATCCACCGCCAGAAGTCA 680 * consensus_9323#2 CGGTGACGTACGGCATCTGGATCTGTCTCGAGTGCTCGGGCAAGCACCGCGGCCTCGGTG 608 consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 ATCCAAGGAGAAACACTCCCATCCCAGATCTGGTGGTAGATAAGCAAAATGAGAGAGATA 1180 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 ATCACACGAGCTTTTCGACACGGTGCAATCATCGCTTGCTACGGTGCTGGAACGTCTTCT 740 consensus_9323#2 TGCATCTGTCCTTCGTGCGGTCCGTGTCGATGGACAAGTGGAAGGACATCGAGCTGGAGA 668 consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 CAATTATATACAGTTATAGAAGTGCGAAAACATGCAGCAGTTGGGGAGAGAGAGAAAGAG 1240 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 CGAAGGTGGCGAACGTGGCGAAGGAGAACGCGCTCAAGTACGGCAGTATCGCCTCGCAAA 800 consensus_9323#2 AGATGAAGGTGGGCGGCAATCGGAAGGCGAGAGAGTTTCTCGACGCGCAGGACGACTGGG 728 consensus_9323#3 ------------------------------------------------------------ consensus_9323#0 ATAAAAAAATAGGAGAAAAGGGGAAGAGATATATAATACGAAGAGACACACAAGAAAATG 1300 consensus_9323#4 ------------------------------------------------------------ consensus_9323#1 AGGTGACAGAGGTGGGCCGTAAAGGATGGGGTGGTTTCGGTGGCCCGGGCAGTGGCAGCT 860 consensus_9323#2 ACGAGACGATGCCGATCCAGCGGAAGTACAGT--------------------- 760 consensus_9323#3 ----------------------------------------------------- consensus_9323#0 TAGGCGCTATATATATACACATATTCTATATTCTAGTAG-------------- 1339 consensus_9323#4 ----------------------------------------------------- consensus_9323#1 ACAGCACCCCGTCCGGCAGTAACGATCAGTACAGCAACATCTCGTCGGACAGC 913 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||