cluster # 9328

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Anopheles gambiae
cluster # 9328 cluster # 9328 Sequences # 16 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9328#0 length = 740 sequences # 10
consensus_9328#1 length = 659 sequences # 3

consensus_9328#2 length = 647 sequences # 2
consensus_9328#3 length = 637 sequences # 1

consensusID : consensus_9328#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 740
fasta sequence

                              [CATTATGGCCGAGGAAAAACAATAATTCTGAAGAGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGCA--AAAAAAAAAANAAAAAAAAAAAAAAAACTTTGGGGCCCCCGGCCCATTNNACTNAACTAACCACCTATTCTGGGNCGTTNNCACCCNCTGGCCAATCCCCCTTATANGAGATGTTNAACACNNCCCGCGC]

[+] EMBL CF541828             [CATTATGGCCGAGGAAAAACAATAATTCTGAAGAGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTAGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCCGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTGTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAANGAATAGTTTGAACAACANNAAAAAAAAAA                                                                                                                        ]
[+] EMBL CF541652             [                         TTCTGAAGAGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTAAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTGCGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGACGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAGCCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCATATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGCAGGAAAAAAAAAA                                                                                                                        ]
[+] EMBL CF541974             [                           CTGAAGAGCAAGGTGTGACATCATGATACGACAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAGATCATGAAGGATTATGATAAGGCATNAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAANNAATAGTGTGAACAGCA  AAAAAAAAA                                                                                                                         ]
[+] EMBL BM625140             [                             ccgGAGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAG                                                                                                                                                                   ]
[+] EMBL AGA302659            [                                     AGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTT                                                                                                                                            ]
[+] EMBL CF542060             [                                       GTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAANGAACGTAATAAAAGGAATAGTNTGAACAGCA  CAAAAAAAANNAAAAAAAAAAAAAAAACTTTGGGGCCCCCGGCCCATTNNACTNAACTAACCACCTATTCTGGGNCGTTNNCACCCNCTGGCCAATCCCCCTTATANGAGATGTTNAACACNNCCCGCGC]
[+] EMBL BM589913             [                                      ccgGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGCAgg                                                                                                                                  ]
[+] EMBL CF541802             [                                                                                        TGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGTGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGCG  AAAAAAAAAA                                                                                                                        ]
[+] EMBL CF542012             [                                                                                                                      GTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCATGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACGGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGTA  AAAAAAAAA                                                                                                                         ]
[+] EMBL CF541624             [                                                                                                                                          GCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGACTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATGGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTGCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCANNAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGCA  A                                                                                                                                 ]




>consensus_9328#0
CATTATGGCCGAGGAAAAACAATAATTCTGAAGAGCAAGGTGTGACATCATGATACGGCA
AGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGT
GCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCG
GTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACT
TGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACAT
TATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACA
AGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGG
GCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACA
ACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAA
CTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGT
TTGAACAGCAAAAAAAAAAANAAAAAAAAAAAAAAAACTTTGGGGCCCCCGGCCCATTNN
ACTNAACTAACCACCTATTCTGGGNCGTTNNCACCCNCTGGCCAATCCCCCTTATANGAG
ATGTTNAACACNNCCCGCGC

consensusID : consensus_9328#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 659
fasta sequence

                              [GTGTGACATCATGATACGGCAAGTGATTATTAGCTATTTTCTCGCAGTGTGCTTGCTAGCACTCGTGCAGAGTGAAACTGTACAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGTGAGATCCGCCGGTACGAGATCATCGAAGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTCGACTTTGTCTATGAGGATGGTCGTGGCGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAGTGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAACAGGCTGGCAAAGTGCCACAACATCAACGGTACACTGCAGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGCAGCCANNAAAAAAAAAAAANAAAAAAAAAAANACTTTTGGGGCCCCCCGNCGCCCNANNNAACTTTTANNNCCCAACCCAACCCNTNTT]

[+] EMBL CF542088             [GTGTGACATCATGATACGGCAAGTGATTATTAGCTATTTTCTCGCAGTGTGCTTGCTAGCACTCGTGCAGAGTGAAACTGTACAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGTGAGATCCGCCGGTACGAGATCATCGAAGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTCGACTTTGTCTATGAGGATGGTCGTGGCGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAGTGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAACAGGCTGGCAAAGTGCCACAACATCAACGGTACACTGCAGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAANGAATAGTTTGAACAGCAGCCANNAAAAAAAAAAAANAAAAAAAAAAANACTTTTGGGGCCCCCCGNCGCCCNANNNAACTTTTANNNCCCAACCCAACCCNTNTT]
[+] EMBL CF541853             [GTGTGACATCATGATACGGCAAGTGATTATTAGCTATTTTCTCGCAGTGTGCTTGCTAGCACTCGTGCAGAGTGAAACTGTACAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGTGAGATCCGCCGGTACGAGATCATCGAAGGACCGGAGATGGACAAGCATATTCATTGCGTGATGCGAGCACTCGACTTTGTCTATGAGGATGGTCGTGGCGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAGTGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAACAGGCTGGCAAAGTACCACAACATCAACGGTACACTGCAGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGANCAaaaaaaaaa                                                                                  ]
[+] EMBL BM618643             [                                                                                                                             ccgGTGAGATCCGCCGGTACGAGATCATCGAAGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTCGACTTTGTCTATGAGGATGGTCGTGGCGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTCGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAGTGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAACAGGCTGGCAAAGTGCCACAACATCAACGGTACACTGCAGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGC                                                                                         ]




>consensus_9328#1
GTGTGACATCATGATACGGCAAGTGATTATTAGCTATTTTCTCGCAGTGTGCTTGCTAGC
ACTCGTGCAGAGTGAAACTGTACAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAG
TAGACTGTGTGAGATCCGCCGGTACGAGATCATCGAAGGACCGGAGATGGACAAGCACAT
TCATTGCGTGATGCGAGCACTCGACTTTGTCTATGAGGATGGTCGTGGCGATTACCATAA
GCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAA
GTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAGTG
TCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAA
ACAGGCTGGCAAAGTGCCACAACATCAACGGTACACTGCAGAGTTTGTGCAAATCATGAA
GGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAG
GAACGTAATAAAAGGAATAGTTTGAACAGCAGCCANNAAAAAAAAAAAANAAAAAAAAAA
ANACTTTTGGGGCCCCCCGNCGCCCNANNNAACTTTTANNNCCCAACCCAACCCNTNTT

consensusID : consensus_9328#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 647
fasta sequence

                              [AGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTT-CCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTNTGAACAGCAGAAAAAAAAAAAAAANAAAAAAAAAAAAAACCNTGTGTGGGCCCCCGNCGGCNCATTAACCTTNNNACCC]

[+] EMBL CF542040             [AGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTT CCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTNTGAACAGCAGAAAAAAAAAAAAAANAAAAAAAAAAAAAACCNTGTGTGGGCCCCCGNCGGCNCATTAACCTTNNNACCC]
[+] EMBL CF541963             [AGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCTTGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTACAAATGTCTGCTGAAATCAACCACCGGGCGCACGTACAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTNCCACAACATCAACGGTACACTGCTGAGTNTGTGCAAATCATGAAGGATCATGATAAGGCATGAAACTGCTGATATTGAAATGAAAACAGATGTCGCGTGCANAGGAA                                                                                                  ]




>consensus_9328#2
AGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTT
GTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCT
GAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAA
GCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTA
CCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACACGATGTGAATCT
TGAGAAGTGTATTGGCGAATGCGTACAAGTCCCGACAAGCGAGCGTGCTCACGTGTTCTA
CAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGA
ATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAAT
CATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGT
TCAAAGGAACGTAATAAAAGGAATAGTNTGAACAGCAGAAAAAAAAAAAAAANAAAAAAA
AAAAAAACCNTGTGTGGGCCCCCGNCGGCNCATTAACCTTNNNACCC

consensusID : consensus_9328#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 637
fasta sequence

                              [ATTCTGAAGAGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACAANNACCCCCCCCNNNATAAAANAAGAAAGNTGTANTTNGGGCGAAATTGNCGTTANCAAANGNTNCCCCGAAACAAANGCCGAAGCCGNTGNCTNCANCGTTGNTTTCTACAAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGTAGCAAAAAAAAAA]

[+] EMBL CF541826             [ATTCTGAAGAGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACAANNACCCCCCCCNNNATAAAANAAGAAAGNTGTANTTNGGGCGAAATTGNCGTTANCAAANGNTNCCCCGAAACAAANGCCGAAGCCGNTGNCTNCANCGTTGNTTTCTACAAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGTAGCAAAAAAAAAA]




>consensus_9328#3
ATTCTGAAGAGCAAGGTGTGACATCATGATACGGCAAGTGATTATCAGCTATTTTCTCAC
AGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGTGCAAGATTGTGAGAATAAGCTGCC
ACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCGGTACGAGATCATCGAGGGACCGGA
GATGGACAAGCACATTCATTGCGTGATGCGAGCACTTGACTTTGTCTATGAGGATGGTCG
TGGAGATTACCATAAGCTGTACGATCCATTGAACATTATCGAGCTGGACAAAAGACAANN
ACCCCCCCCNNNATAAAANAAGAAAGNTGTANTTNGGGCGAAATTGNCGTTANCAAANGN
TNCCCCGAAACAAANGCCGAAGCCGNTGNCTNCANCGTTGNTTTCTACAAAATGTCTGCT
GAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTTCGATCTGATGGAATTGAAAAAGGC
TGGCAAAGTTCCACAACATCAACGGTACACTGCTGAGTTTGTGCAAATCATGAAGGATTA
TGATAAGGCATTAAACTGCTGAAATTGAAATGAAAACAGATGTAGCGTTCAAAGGAACGT
AATAAAAGGAATAGTTTGAACAGTAGCAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9328#1      ---------------------------------------GTGTGACATCATGATACGGCA 21
consensus_9328#2      ---------------------------------AGCAAGGTGTGACATCATGATACGGCA 27
consensus_9328#0      CATTATGGCCGAGGAAAAACAATAATTCTGAAGAGCAAGGTGTGACATCATGATACGGCA 60
consensus_9328#3      ------------------------ATTCTGAAGAGCAAGGTGTGACATCATGATACGGCA 36
                                                             *********************

consensus_9328#1      AGTGATTATTAGCTATTTTCTCGCAGTGTGCTTGCTAGCACTCGTGCAGAGTGAAACTGT 81
consensus_9328#2      AGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGT 87
consensus_9328#0      AGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGT 120
consensus_9328#3      AGTGATTATCAGCTATTTTCTCACAGTGTGCTTGTTAGCACTCGTTCAGAGTGAGACTGT 96
                      ********* ************ *********** ********** ******** *****

consensus_9328#1      ACAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGTGAGATCCGCCG 141
consensus_9328#2      GCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCG 147
consensus_9328#0      GCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCG 180
consensus_9328#3      GCAAGATTGTGAGAATAAGCTGCCACCGTCGCTGAAGAGTAGACTGTGCGAGATCCGCCG 156
                       *********************************************** ***********

consensus_9328#1      GTACGAGATCATCGAAGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACT 201
consensus_9328#2      GTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACT 207
consensus_9328#0      GTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACT 240
consensus_9328#3      GTACGAGATCATCGAGGGACCGGAGATGGACAAGCACATTCATTGCGTGATGCGAGCACT 216
                      *************** ********************************************

consensus_9328#1      CGACTTTGTCTATGAGGATGGTCGTGGCGATTACCATAAGCTGTACGATCCATTGAACAT 261
consensus_9328#2      TGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACAT 267
consensus_9328#0      TGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACAT 300
consensus_9328#3      TGACTTTGTCTATGAGGATGGTCGTGGAGATTACCATAAGCTGTACGATCCATTGAACAT 276
                       ************************** ********************************

consensus_9328#1      TATCGAGCTGGACAAAAGACA-----------CGATGTGAATCTTGAGAAGTGTATT--- 307
consensus_9328#2      TATCGAGCTGGACAAAAGACA-----------CGATGTGAATCTTGAGAAGTGTATT--- 313
consensus_9328#0      TATCGAGCTGGACAAAAGACA-----------CGATGTGAATCTTGAGAAGTGTATT--- 346
consensus_9328#3      TATCGAGCTGGACAAAAGACAANNACCCCCCCCNNNATAAAANAAGAAAGNTGTANTTNG 336
                      *********************           *    * **    ** *  **** *   

consensus_9328#1      GGCGAA--TGC-----GTACAAGTCCC-----GACAAGCG--------AGCGTGCTCAC- 346
consensus_9328#2      GGCGAA--TGC-----GTACAAGTCCC-----GACAAGCG--------AGCGTGCTCAC- 352
consensus_9328#0      GGCGAA--TGC-----GTACAAGTCCC-----GACAAGCG--------AGCGTGCTCAC- 385
consensus_9328#3      GGCGAAATTGNCGTTANCAAANGNTNCCCCGAAACAAANGCCGAAGCCGNTGNCTNCANC 396
                      ******  **        * * *   *      ****  *           *    **  

consensus_9328#1      ---GTGTTCTACAAG-TGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTT 402
consensus_9328#2      ---GTGTTCTACAAA-TGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTT 408
consensus_9328#0      ---GTGTTCTACAAA-TGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTT 441
consensus_9328#3      GTTGNTTTCTACAAAATGTCTGCTGAAATCAACCACCGGGCGCACGTTCAAGAAGGTGTT 456
                         *  ********  ********************************************

consensus_9328#1      CGATCTGATGGAATTGAAACAGGCTGGCAAAGTGCCACAACATCAACGGTACACTGCAGA 462
consensus_9328#2      CGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGA 468
consensus_9328#0      CGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGA 501
consensus_9328#3      CGATCTGATGGAATTGAAAAAGGCTGGCAAAGTTCCACAACATCAACGGTACACTGCTGA 516
                      ******************* ************* *********************** **

consensus_9328#1      GTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAA 522
consensus_9328#2      GTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAA 528
consensus_9328#0      GTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAA 561
consensus_9328#3      GTTTGTGCAAATCATGAAGGATTATGATAAGGCATTAAACTGCTGAAATTGAAATGAAAA 576
                      ************************************************************

consensus_9328#1      CAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGCAGCCANNAAAAA 582
consensus_9328#2      CAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTNTGAACAGCAGA-AAAAAAAA 587
consensus_9328#0      CAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGC-----AAAAAAA 616
consensus_9328#3      CAGATGTAGCGTTCAAAGGAACGTAATAAAAGGAATAGTTTGAACAGTAGC--AAAAAAA 634
                      *************************************** *******        *****

consensus_9328#1      AAAAAAANAAAAAAAAAAANACTTTTGGGGCCCCCCGNCGCCCNANNNAACTTTTANNNC 642
consensus_9328#2      AAAAANAAAAAAAAAAAAAACCNTGTGTGGGCCCCCGNCGGCNCATTAACCTTNNNACCC 647
consensus_9328#0      AAAANAAAAAAAAAAAAAAAACTTTGGGGCCCCCGGCCCATTNNACTNAAC--TAACCAC 674
consensus_9328#3      AAA--------------------------------------------------------- 637
                      ***                                                         

consensus_9328#1      CCAACCCAACCCNTNTT------------------------------------------- 659
consensus_9328#2      ------------------------------------------------------------
consensus_9328#0      CTATTCTGGGNCGTTNNCACCCNCTGGCCAATCCCCCTTATANGAGATGTTNAACACNNC 734
consensus_9328#3      ------------------------------------------------------------
                                                                                  

consensus_9328#1      ------
consensus_9328#2      ------
consensus_9328#0      CCGCGC 740
consensus_9328#3      ------