These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9330#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 968 fasta sequence [TGTGGTGTCGGCGGTGTGATCGGTAATGGAGTGCAAACATTAAAGAAGTTGGGTTTTCGGAGCAAAATCCTTGTCTAAACACCAGCATTTCTAGTTCCTTTACGTGTGAAAGCACACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGGGCCGTTGCCGAATTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACCAATCTGCCCCGCCGTACGGTGGGCGCCGTGACGTACTACGAGGGCGAACGGATGCAGCTGCCGGACGACCCGTGCCAGACGTGCATCTGCACGCAGCATTTCAACGCGAGCGACCCGCACGGCCACACGAAATGCTACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGGTGCTGGCGCACGGTGCAGCCCCGGTGTACTACGGCAATCGGTGCTGCCCGTGGGAGTGGCGACTGCCAAAAGCAAACGATCGTATCCGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGGGAGGACGGTTCGAGACAGCTGCACGTACGGTAACTTGTCGCTAAGCATAGGGGAGTCACTGGTAGCGGATGTGACGCCGGTCGGCATTTACCAGTGCTTCTGTGCCATCCCCCCGATGGTCCACTGTACCTTAACGGCAAACTGACGCGCGAGGAGCGTGATACGCGAATGTACTTCATGTTGAGCGTGATATGTGACATTTATTACAATTATTACTGAATAAAAAGCTTTAAAAC--GAAAAAAAA] [+] EMBL CNS09INT [TGTGGTGTCGGCGGTGTGATCGGTAATGGAGTGCAAACATTAAAGAAGTTGGGTTTTCGGAGCAAAATCCTTGTCTAAACACCAGCATTTCTAGTTCCTTTACGTGTGAAAGCACACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGGGCCGTTGCCGAATTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACCAATCTGCCCCGCCGTACGGTGGGCGCCGTGACGTACTACGAGGGCGAACGGATGCAGCTGCCGGACGACCCGTGCCAGACGTGCATCTGCACGCAGCATTTCAACGCGAGCGACCCGCACGGCCACACGAAATGCTACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGGTGCTGGCGCACGGTGCAGCCCCGGTGTACTACGGCAATCGGTGCTGCCCGTGGGAGTGGCGACTGCCAAAAGCAAACGATCGTATCCGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGGGAGGACGGTTCGAGACAGCTGCACGTACGGTAACTTGTCGCTAAGCATAGGGGAGTCACTGGTAGCGGATGTGACGCCGGTCGGCATTTACCAGTGCTTCTGTGCCATCCCCCCGATGGTCCACTGTACCTTAACGGCAAACTGACGCGCGAGGAGCGTGATACGCGAATGTACTTCATGTTGAGCGTGATATGTGACATTTATTACAATTATTACTGAATAAAAAGCTTTAAAAa ] [+] EMBL CNS09QBL [ TGATCGGTAATGGAGTGCAAACATTAAAGAAGTTGGGTTTTCGGAGCAAAATCCTTGTCTAAACACCAGCATTTCTAGTTCCTTTACGTGTGAAAGCACACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGGGCCGTTGCCGAATTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACCAATCTGCCCCGCCGTACGGTGGGCGCCGTGACGTACTACGAGGGCGAACGGATGCAGCTGCCGGACGACCCGTGCCAGACGTGCATCTGCACGCAGCATTTCAACGCGAGCGACCCGCACGGCCACACGAAATGCTACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGGTGCTGGCGCACGGTGCAGCCCCGGTGTACTACGGCAATCGGTGCTGCCCGTGGGAGTGGCGACTGCCAAAAGCAAACGATCGTATCCGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGGGAGGACGGTTCGAGACAGCTGCACGTACGGTAACTTGTCGCTAAGCATAGGGGAGTCACTGGTAGCGGATGTGACGCCGGTCGGCATTTACCAGTGCTTCTGTGCCATCCCCCCGATGGTCCACTGTACCTTAACGGCAAACTGACGCGCGAGGAGCGTGATACGCGAATGTACTTCATGTTGAGCGTGATATGTGACATTTATTACAATTATTACTGAA ] [+] EMBL CNS09PKE [ AGTGCAAACATTAAAGAAGTTGGGTTTTCGGAGCAAAATCCTTGTCTAAACACCAGCATTTCTAGTTCCTTTACGTGTGAAAGCACACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGGGCCGTTGCCGAATTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACCAATCTGCCCCGCCGTACGGTGGGCGCCGTGACGTACTACGAGGGCGAACGGATGCAGCTGCCGGACGACCCGTGCCAGACGTGCATCTGCACGCAGCATTTCAACGCGAGCGACCCGCACGGCCACACGAAATGCTACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGGTGCTGGCGCACGGTGCAGCCCCGGTGTACTACGGCAATCGGTGCTGCCCGTGGGAGTGGCGACTGCCAAAAGCAAACGATCGTATCCGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGGGAGGACGGTTCGAGACAGCTGCACGTACGGTAACTTGTCGCTAAGCATAGGGGAGTCACTGGTAGCGGATGTGACGCCGGTCGGCATTTACCAGTGCTTCTGTGCCATCCCCCCGATGGTCCACTGTACCTTAACGGCAAACTGACGCGCGAGGAGCGTGATACGCGAATTTACT ] [-] EMBL CNS09QBM [ TCGGAGCAAAATCCTTGTCTAAACACCAGCATTTCTAGTTCCTTTACGTGTGAAAGCACACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGGGCCGTTGCCGAATTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACCAATCTGCCCCGCCGTACGGTGGGCGCCGTGACGTACTACGAGGGCGAACGGATGCAGCTGCCGGACGACCCGTGCCAGACGTGCATCTGCACGCAGCATTTCAACGCGAGCGACCCGCACGGCCACACGAAATGCTACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGG G TGGCGCACGGTGCAGCCCCGGTGTACTACGGCAATCGGTGCTGCCCGTGGGAGTGGCGACTGCCAAAAGCAAACGATCGTATCCGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGGGAGGACGGTTCGAGACAGCTGCACGTACGGTAACTTGTCGCTAAGCATAGGGGAGTCACTGGTAGCGGATGTGACGCCGGTCGGCATTTACCAGTGCTTCTGTGCCATCCCCCCGATGGTCCACTGTACCTTAACGGCAAACTGACGCGCGAGGAGCGTGATACGCGAATGTACTTCATGTTGAGCGTGATATGTGACATTTATTACAATTATTACTGAAT ] [-] EMBL CNS09INU [ ACACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATTTCTGGAGCCACAAACGTACGAACTGAACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGAACATGCCAAATGAACTCACGGCGGGCCGTTGCCGAATTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACCAATCTGCCCCGCCGTACGGTGGGCGCCGTGACGTACTACGAGGGCGAACGGATGCAGCTGCCGGACGACCCGTGCCAGACGTGCATCTGCACGCAGCATTTCAACGCGAGCGACCCGCACGGCCACACGAAATGCTACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGG G TGGCGCACGGTGCAGCCCCGGTGTACTACGGCAATCGGTGCTGCCCGTGGGAGTGGCGACTGCCAAAAGCAAACGATCGTATCCGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGGGAGGACGGTTCGAGACAGCTGCACGTACGGTAACTTGTCGCTAAGCATAGGGGAGTCACTGGTAGCGGATGTGACGCCGGTCGGCATTTACCAGTGCTTCTGTGCCATCCCCCCGATGGTCCACTGTACCTTAACGGCAAACTGACGCGCGAGGAGCGTGATACGCGAATGTACTTCATGTTGAGCGTGATATGTGACATTTATTACAATTATTACTGAATAAAAAGCTCAAAAAC GAA ] [-] EMBL CNS09PKF [ GTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATTTCTGGAGCCACAAACGTACGAACTGGACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGAACATGCCAAATGAACTCACGGCGGGCCGTTGCCGAATTCCACTGCGCCCACATCAACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACCAATCTGCCCCGCCGTACGGTGGGCGCCGTGACGTACTACGAGGGCGAACGGATGCAGCTGCCGGACGACCCGTGCCAGACGTGCATCTGCACGCAGCATTTCAACGCGAGCGACCCGCACGGCCACACGAAATGCTACACGAACGCGTGTGCGTTCGAGCTGATAGCG ] [-] EMBL AGA280857 [ GTGCGTTCGAGCTGATAGCGCCTTCGGTGCTGGCGCACGGTGCGGCCCCGGTGTACTACGGCAATCGATGCTGCCCGTGGGAGTGGCGACTGCCAAAAGCAAACGATCGTATCCGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGAGTGGACGGTTCGAGATAGCTGCACGTACGGTAACTTGACGATGAGCATAGGAGAGTCACTGGTAGCGGATGTGACGCCGGTCGGCATTTACCAGTGCTTCTGTGCCATCCCCCCGATGGTCCACTGTACCTTAACGGCAAACTGACGCGCGAGGAGCGTGATACGCGAATGTACTTCATGTTGAGCGTGATATGTGACATTTATTACAATTATTACTGAATAAAAAGCTTTAAAACCGGAAAAAAAA] consensusID : consensus_9330#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 957 fasta sequence [ATCGGCACCAGGGCTTGCCGTCTCTCTCGACGTGTCTGTCGTGTCGGCGGTGTGATCGGTAATGGAGTGCAAACATTAAAGAAGTTGGGTTTTCGGAGCAAAATCCTTGTCTAAACACCAGCAATTCTAGTTCCTTTACGTGTGAAAGCATACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACGCTTTGGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCGGCCGAGCAAAACGCACA-GGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGCGCCGTTGCCGAGTTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACC-AATCTGC-CCCG-CTGTAC-GGTGGGCGCGGTGACGTACTACGAGGGCGAACGGA-TGCAGC-TG-CC-GGACGACCCGTGCC-AGACG-TGCA-TCTGTACG--CAG-CATTTCAAC-GCGAGCGACCCGCACGGCC-ACAC-GAAATGCT--ACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGGTGCTGGCGCACGGTGCGGCCCCGGTGTACTACGGCAATCGATGCTGCCCGTGGGAGTGGCGACTGCCAAAAGCAAACGATCGTATCCGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGAGTGGACGGTTCGAGATAGCTGCACGTACGGTAACTTGACGATGAGC] [+] EMBL BX466429 [ATCGGCACCAGGGCTTGCCGTCTCTCTCGACGTGTCTGTCGTGTCGGCGGTGTGATCGGTAATGGAGTGCAAACATTAAAGAAGTTGGGTTTTCGGAGCAAAATCCTTGTCTAAACACCAGCATTTCTAGTTCCTTTACGTGTGAAAGCACACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCAGGAGCCACAAACGCTTTGGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCGGCCGAGCAAGACGCACAGGGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGCGCCGTTGCCGAATTCCACTGGGCCCACATCGACTGTCCGGAGTTCCTGTCGCCGCACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACCGAATCTGCGCCCGTTTGTACGGGTGGGCGCGGTGACGTACTACGAGGGCGAACGGATTGCAGCTTGACCGGGACGACCCGTGCCAAGACGTTGCATTCTGGACGNNCAGACATTTCAACGGCGAGCGACCAGTAGGGCCAACACGGAAATGGTNCGCACGAACGgcg ] [+] EMBL BX621834 [ CTCGACGTGTCTGTCGTGTCGGCGGTGTGATCGGTAATGGAGTGCATACATTAATGAAGTTG GGAGCAAAATCCTTGTCTTTAGACCAGCAATTCAAGTTCCTTTACGTGTGAAAGCATAAATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACGCTTTGGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCGGCCGAGCAAAACGCACA GGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGCGCCGTTGCCGAGTTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACC AATCTGC CCCG CTGTAC GGTGGGCGCGGTGACGTACTACGAGGGCGAACGGA TGCAGC TG CC GGACGACCCGTGCC AGACG TGCA TCTGTACG CAG CATTTCAAC GCGAGCGACCCGCACGGGC ACAC GAAATGCT ACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGGTGCTGGCGCACGGTGCGGCCCCGGTGTACTACGGCAATCGATGCTGCCCGTGGGAGTGGCGACTG ] [+] EMBL BX620737 [ gagGGTAATGGAGTGCTAACATTAAAGAAGTTGGGTTTTCGGAGCAAAATCCTTGTCTAAACACCAGCATTTCTAGTTCCTTTACGTGTGAAAGCACACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCAGGAGCCACAAACGCTTTGGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCGGCCGAGCAAGACGCACA GGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGCGCCGTTGCCGAATTCCACTGCGCCCACATCGACTGTCCGGAGTTCCTGTCGCCGCACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACC AATCTGC CCCG TTGTAC GGTGGGCGCGGTGACGTACTACNAGGGCGAACGGA TGCAGC TG CC GGNCGACCCGTGCC AGACG TGCA TCTGCACG CAG CATTTCAAC ] [+] EMBL BX602344 [ ACATTAATGAAGTTG GGAGCAAAATCCTTGTCTTTAGACCAGCAATTCAAGTTCCTTTACGTGTGAAAGCATAAATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACGCTTTGGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCGGCCGAGCAAAACGCACA GGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGCGCCGTTGCCGAGTTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACG ] [+] EMBL BX622519 [ CAATTCTAGTTTCTTTGCGTGTGTAAGCATACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACACTTTTGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCGGCCGAGCAAAACGCACA GGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGTCAAATGAACTCACGGCGCGCCGTTGCCGAGTTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCGCATCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACC AATCTGC CCCG CTGTAC GGTGGGCGCGGTGACGTACTACGAGGGCGAACGGA TGCAGC TA CC GGACGACCCGTGCC AGACG TGCA TCTGTACG CAG CATTTCAAC GCGAGTGACCCGCACGGCC ACAC GAAATGCT ACACGAACGCGTGTGCGTTCGAGCTGATANCGCCGTCNGTGCTGGCGCACGGTGCGGCCCCGGTGTACTACGGGAATCG ] [+] EMBL BX618552 [ ACGCACA GGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGCGCCGTTGCCGAGTTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACC AATCTGC CCCG CTGTAC GGTGGGCGCGGTGACGTACTACGAGGGCGAACGGA TGCAGC TG CC GGACGACCCGTGCC AGACG TGCA TCTGTACG CAG CATTTCAAC GCGAGCGACCCGCACGGCC ACAC GAAATGCT ACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGGTGCTGGCGCACGGTGCGGCCCCGGTGTACTACGGCAATCGATGCTGCCCGTGGGAGTGGCGACTGCCAAAAGCAAACGATCGTATCCGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGAGTGGACGGTTCGAGATAGCTGCACGTACGGTAACTTGACGATGAGC] [+] EMBL AGA282489 [ ATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGCGCGCCGTTGCCGAGTTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACC AATCTGC CCCG CTGTAC GGTGGGCGCGGTGACGTACTACGAGGGCGAACGGA TGCAGC TG CC GGACGACCCGTGCC AGACG TGCA TCTGTACG CAG CATTTCAAC GCGAGCGACCCGCACGGCC ACAC GAAATGCT ACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGGTGCTGGCGCACGGTGCGGCCCCGGTGTACTACGGCAATCGATGCT ] consensusID : consensus_9330#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 562 fasta sequence [CCGAGGTTAGATGTGATCGGTAATGGAGTGCAAACTTAAAGAAGTTGGGAGCAAAATCCTTGCCTAAACACCAGCAATTCTAGTTTCTTTGCGTGTGTAAGCATACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACACTTTTGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCGGCCGAGCAAAACGCACAGGGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGTCAAATGAACTCACGGCGCGCCGTTGCCGAGTTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCAGCGCATCGGGCCGGCTGTGTGCGCAGTACCGACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGGCGCACC] [+] EMBL AL694701 [CCGAGGTTAGATGTGATCGGTAATGGAGTGCAAACTTAAAGAAGTTGGGAGCAAAATCCTTGCCTAAACACCAGCAATTCTAGTTTCTTTGCGTGTGTAAGCATACATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACACTTTTGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCGGCCGAGCAAAACGCACAGGGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGTCAAATGAACTCACGGCGCGCCGTTGCCGAGTTCCACTGCGCCCACATCGACTGTCCCGAGTTCCTGTCAGCGCATCGGGCCGGCTGTGTGCGCAGTACCGACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGGCGCACC] consensusID : consensus_9330#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 480 fasta sequence [GCAAGCCATCGGGTGCTAAGGCGGTAATGGAGTGCATACATTAATGAAGTTGGGAGCAAAATCCTTGTCTTTAGACCAGCAATTCAAGTTCCTTTACGTGTGAAAGCATAAATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACGCTTTGGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCGGCCGAGCAAAACGCACAGGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGACGCGCCGTTAGCCGAGTTCCACATGGCGCCCACATCGACTGTCCCGA] [+] EMBL BX469008 [GCAAGCCATCGGGTGCTAAGGCGGTAATGGAGTGCATACATTAATGAAGTTGGGAGCAAAATCCTTGTCTTTAGACCAGCAATTCAAGTTCCTTTACGTGTGAAAGCATAAATCTAGACAGAAATGGTTTCAGTTTTAGTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAACGCTTTGGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCGGCCGAGCAAAACGCACAGGGCTGCCCACTATGGTTCAACTGTTCGATGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAACGTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTGCACATGCCAAATGAACTCACGGACGCGCCGTTAGCCGAGTTCCACATGGCGCCCACATCGACTGTCCCGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9330#2 -----------------------------------CCGAG--GTTAGATGTGA--TCGGT 21 consensus_9330#3 -----------------------------------GCAAGCCATCGGGTGCTAAGGCGGT 25 consensus_9330#1 ATCGGCACCAGGGCTTGCCGTCTCTCTCGACGTGTCTGTCGTGTCGGCGGTGTGATCGGT 60 consensus_9330#0 ------------------------------------TGTGGTGTCGGCGGTGTGATCGGT 24 * * * **** consensus_9330#2 AATGGAGTGCAAAC-TTAAAGAAGTTGGG-------AGCAAAATCCTTGCCTAAACACCA 73 consensus_9330#3 AATGGAGTGCATACATTAATGAAGTTGGG-------AGCAAAATCCTTGTCTTTAGACCA 78 consensus_9330#1 AATGGAGTGCAAACATTAAAGAAGTTGGGTTTTCGGAGCAAAATCCTTGTCTAAACACCA 120 consensus_9330#0 AATGGAGTGCAAACATTAAAGAAGTTGGGTTTTCGGAGCAAAATCCTTGTCTAAACACCA 84 *********** ** **** ********* ************* ** * **** consensus_9330#2 GCAATTCTAGTTTCTTTGCGTGTGTAAGCATACATCTAGACAGAAATGGTTTCAGTTTTA 133 consensus_9330#3 GCAATTCAAGTTCCTTTACGTGTGAAAGCATAAATCTAGACAGAAATGGTTTCAGTTTTA 138 consensus_9330#1 GCAATTCTAGTTCCTTTACGTGTGAAAGCATACATCTAGACAGAAATGGTTTCAGTTTTA 180 consensus_9330#0 GCATTTCTAGTTCCTTTACGTGTGAAAGCACACATCTAGACAGAAATGGTTTCAGTTTTA 144 *** *** **** **** ****** ***** * *************************** consensus_9330#2 GTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAAC 193 consensus_9330#3 GTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAAC 198 consensus_9330#1 GTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAAC 240 consensus_9330#0 GTGCACAAACTTCCAGCGATGCTGATCGTTGCCGTTTTGCTGATCTCTGGAGCCACAAAC 204 ************************************************************ consensus_9330#2 ACTTTTGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCG 253 consensus_9330#3 GCTTTGGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCG 258 consensus_9330#1 GCTTTGGGCCGATGTCCAGTGCCCACCAAACACTACACGACCCTCGGGTGCGAACCGGCG 300 consensus_9330#0 GTACGAACTGCACGCGCACGTCCCGGACGAGAAGGTGAAATCGTCCTGCCTGGCCCTGTG 264 * * ** *** * * * * ** * * ** * * consensus_9330#2 GCCGAGCAAAACGCACAGG-GGCTGCCCACTATGG--TTCAACTGT-------TCGA--- 300 consensus_9330#3 GCCGAGCAAAACGCACAGG-G-CTGCCCACTATGG--TTCAACTGT-------TCGA--- 304 consensus_9330#1 GCCGAGCAAAACGCACAGG-G-CTGCCCACTATGG--TTCAACTGT-------TCGA--- 346 consensus_9330#0 CACATGCCAAATGAACTCACGGCGGGCCGTTGCCGAATTCCACTGCGCCCACATCGACTG 324 * ** *** * ** * * * ** * * *** **** **** consensus_9330#2 TGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAAC-GTACGAACTGCAC 359 consensus_9330#3 TGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAAC-GTACGAACTGCAC 363 consensus_9330#1 TGCTGGAACAGCGCGCCCATGATAAGTGTTATCTGTTCGGCAAAAC-GTACGAACTGCAC 405 consensus_9330#0 TCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTACCGCACGAACGATTG 384 * * * * *** * * *** ** ** ** * ****** consensus_9330#2 GCGCACGTCCCGG----------ACGAGAAG---GTGAAATCGTCCTGCCTGGCCCTGTG 406 consensus_9330#3 GCGCACGTCCCGG----------ACGAGAAG---GTGAAATCGTCCTGCCTGGCCCTGTG 410 consensus_9330#1 GCGCACGTCCCGG----------ACGAGAAG---GTGAAATCGTCCTGCCTGGCCCTGTG 452 consensus_9330#0 CTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACCAATCTGCCCCGCCGTACGGTGGG 444 ** ******** ******* ** * ** *** * ** * consensus_9330#2 C------ACATGTCAAATGAACTCACGG-CGC-GCCGTT-GCCGA---GTTCCAC---TG 451 consensus_9330#3 C------ACATGCCAAATGAACTCACGGACGC-GCCGTTAGCCGA---GTTCCACAT-GG 459 consensus_9330#1 C------ACATGCCAAATGAACTCACGG-CGC-GCCGTT-GCCGA---GTTCCAC---TG 497 consensus_9330#0 CGCCGTGACGTACTACGAGGGCGAACGGATGCAGCTGCCGGACGACCCGTGCCAGACGTG 504 * ** * * * * **** ** ** * * *** ** *** * consensus_9330#2 CGCCCACATCGACTGTCCCGAGTTCCTGTCAGCGCATCGGGCCGGCTGTGTGCGC-AGTA 510 consensus_9330#3 CGCCCACATCGACTGTCCCGA--------------------------------------- 480 consensus_9330#1 CGCCCACATCGACTGTCCCGAGTTCCTGTCGCCACACCGGGCCGGCTGTGTGCGCCAGTA 557 consensus_9330#0 CATCTGCACGCAGCATTTCAA-CGCGAGCGACCCGCACGGCCACACGAAATGCTACACGA 563 * * ** * * * * consensus_9330#2 CCG-ACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGGCGCACC------- 562 consensus_9330#3 ------------------------------------------------------------ consensus_9330#1 CCGCACGAACGATTGCTGCTCGTCCCGGCAGGCGTGCGGCGAGAAGCGCACCAATCTGCC 617 consensus_9330#0 ACGCGTGTGCGTTCGA-GCTGATAGCGCCGTCGGTGCTGGCGCACGGTGCAGCCCCGGTG 622 consensus_9330#2 ------------------------------------------------------------ consensus_9330#3 ------------------------------------------------------------ consensus_9330#1 CCGCTGTACGGTGGGCGCGGTGACGTACTACGAGGGCGAACGGATGCAGCTGCCGGACGA 677 consensus_9330#0 TACTACGGCAATCGGTGCTGCCCGTGGGAGTGGCGACTGCCAAAAGCAAACGATCGTATC 682 consensus_9330#2 ------------------------------------------------------------ consensus_9330#3 ------------------------------------------------------------ consensus_9330#1 CCCGTGCCAGACGTGCATCTGTACGCAGCATTTCAACGCGAGCGACCCGCACGGCCACAC 737 consensus_9330#0 CGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGGGAGGACGGTTCGAGACAGC 742 consensus_9330#2 ------------------------------------------------------------ consensus_9330#3 ------------------------------------------------------------ consensus_9330#1 GAAATGCTACACGAACGCGTGTGCGTTCGAGCTGATAGCGCCGTCGGTGCTGGCGCACGG 797 consensus_9330#0 TGCACGTACGGTAACTTGTCGCTAAGCATAGGGGAGTCACTGGTAGCGGATGTGACGCCG 802 consensus_9330#2 ------------------------------------------------------------ consensus_9330#3 ------------------------------------------------------------ consensus_9330#1 TGCGGCCCCGGTGTACTACGGCAATCGATGCTGCCCGTGGGAGTGGCGACTGCCAAAAGC 857 consensus_9330#0 GTCGGCATTTACCAGTGCTTCTGTGCCATCCCCCCGATGGTCCACTGTACCTTAACGGCA 862 consensus_9330#2 ------------------------------------------------------------ consensus_9330#3 ------------------------------------------------------------ consensus_9330#1 AAACGATCGTATCCGGCGGGACGAGGGAACGGAGAGCTCAAACGCTTTGGAAGAGTGGAC 917 consensus_9330#0 AACTGACGCGCGAGGAGCGTGATACGCGAATGTACTTCATGTTGAGCGTGATATGTGACA 922 consensus_9330#2 ---------------------------------------------- consensus_9330#3 ---------------------------------------------- consensus_9330#1 GGTTCGAGATAGCTGCACGTACGGTAACTTGACGATGAGC------ 957 consensus_9330#0 TTTATTACAATTATTACTGAATAAAAAGCTTTAAAACGAAAAAAAA 968 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||