cluster # 9332

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Anopheles gambiae
cluster # 9332 cluster # 9332 Sequences # 16 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9332#0 length = 1672 sequences # 11

consensus_9332#1 length = 1013 sequences # 4
consensus_9332#2 length = 259 sequences # 1

consensusID : consensus_9332#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1672
fasta sequence

                              [CTTCCCATTTTAGAACTCATCATCGTCATCCTCGTCGTCGCGCACCTCGTCACGTTCTAACTCAACGGATGGTTCCCGCTGCTCGAAGTCTCCGTCCCGCAGCCCTTCGCCGGCATCGCGATCGAAACGGGCCAAAAATGGTGCTGATGAGCATAAATCGTACAAAAAAACATCATCCGGGAAAAAGGATAGCAAGAACAGACAATCGAAATCGCCTTCGGGCGATCAGCGCCGTTCAGCTGGCAACGGTAGTAACAATAAGAGTCCAATGAAAGCAGACCGGAAGGATAAAAGGAAATCTTCCCCACCGAGATCAACGACGTGGGGGAGGGAATTGGAGCAAATCCAATGAGCGAAAAAATAATCGACGCGACTCTCGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGCGGTCGAGACTACGACAAGGATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCACGCCACCGACGACGTCACTCACCAAACGAGCGAGTACCATCATCGAGAGCGCGCGATTCACGTTCCCGCTCCCGATCCCGGTCAAGATCTGGCGCCAAGTCTTCGCCGCCTCGCACCAGTCAGCAACAAACACCATCGACAAACGCTTCCTACGCCGGCGCTGGTTTGCTTCCCACTCCGAGCAGATTCACGCAAAGCCCGACGACGAAGCCCGTATCGCTGTTGCCCACACCGCCCGTCGCACAGTCGCTGCTGGGAGCGGCTCCTAGCCTTGTTCCGACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCACCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAATGAATCGAAGCTCGGACAGCTTG-CCCTGCCGCTGACAACACCACCCGCTCAACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCGCAACACCGCAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCAGAAGGCAGTGGACAGTGTACCGCTCCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATGCGGATCAAGTGCAGAAGCGCAAATTGCTCTGGAGCCACAAGACAACCGAAAGCAAGGAGGTGTCTTCGAACATAAGCAAATGGGAGCAGGCAAAGTTTGCACAGGACACGGACGGTCGGGTTGCGTCGAAATTCCTGCGCCTAATGGGAGTGAAGGATGCAGCGCCCAAGCCGGGCGAGGAAGGGGAATCGCCCGTTTCGACGGCAGGAGGAACCTCTTCGGCATCCCTCTCGGCAAAGGTAGGCTCCAGCTCAGGGGCGACGGGAGCGAGCGGCCCTTCAAATGGCGGCAAATCGACGGGAGACAGTATTAAGAAGCAGGAAGAACTGTTCTCGACGATGGAGCAGCAGTACGAAGTTGCCCGACAGGTGACACACACGATGCGTGGCGTTGGTCTCGGGTTTGGCTCTCAGGCCCG-CCAGTTCTAATTGCATAAGGCATTACCAACCATATGGCCATAGTTTGTTTTGTCCTTTTGCTTTTGCGCACGTAGAAGCTTTCGCTGTATAGTGTAGCAGAACCTTTGTTTTCGTGTCGCACGTGCGCATTCACGTGCTACAACAGCATCAAGATGAATAAACAAACGACGTGT]

[+] EMBL CNS08T0A             [CTTCCCATTTTAGAACTCATCATCGTCATCCTCGTCGTCGCGCACCTCGTCACGTTCTAACTCAACGGATGGTTCCCGCTGCTCGAAGTCTCCGTCCCGCAGCCCTTCGCCGGCATCGCGATCGAAACGGGCCAAAAATGGTGCTGATGAGCATAAATCGTACAAAAAAACATCATCCGGGAAAAAGGATAGCAAGAACAGACAATCGAAATCGCCTTCGGGCGATCAGCGCCGTTCAGCTGGCAACGGTAGTAACAATAAGAGTCCAATGAAAGCAGACCGGAAGGATAAAAGGAAATCTTCCCCACCGAGATCAACGACGTGGGGGAGGGAATTGGAGCAAATCCAATGAGCGAAAAAATAATCGACGCGACTCTCGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGCGGTCGAGACTACGACAAGGATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCACGCCACCGACGACGTCACTCACCAAACGAGCGAGTACCATCATCGAGAGCGCGCGATTCACGTTCCCGCTCCCGATCCCGGTCAAGATCTGGCGCCAAGTCTTCGCCGCCTCGCACCAGTCAGCAACAAACACCATCGACAAACGCTTCCTACGCCGGCGCTTTTTTGCTTCCCACTCCGAGCAGATTCACGCAAAGCCCGACGACGAAGCCCGTATCGCTGTTGCCCACACCGCCCGTCGCACAGTCGCTGCTGGGAGCGGCTCCTAGCCTTGTTCCGACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCACCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAACGAATCGAAGCTCGGACAACTTG CCCTGCCGCTGGCAACACCACCCGCTCAACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCCAAACACCGCAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCAGAAGGCAGTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX607867             [                                                                                                                                                                                                                                                                                                                                                                                  CGACTCTCGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGCGGTCGAGACTACGACAAGGATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCACGCCACCGACGACGTCACTCACCAAACGAGCGAGTACCATCATCGAGAGCGCGCGATTCACGTTCCCGCTCCCGATCCCGGTCAAGATCTGGCGCCAAGTCTTCGCCGCCTCGCACCAGTCAGCAACAAACACCATCGACAAACGCTTCCTACGCCGGCGCTGGTTTGCTTCCCACTCCGAGCAGATTCACGCAAAGCCCGACGACGAAGCCCGTATCGCTGTTGCCCACACCGCCCGTCGCACAGTCGCTGCTGGGAGCGGCTCCTAGCCTTGTTCCGACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCACCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAACGAATCGAAGCTCGGACAACTTG CCCTGCCGCTGGCAACACCACCCGCTCAACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCGCAACACCGCAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCAGAAGGCAGTGGACAGTGTACCGCTCCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATGCGGATCAAGTGCAGAAGCGCAAATTGCTCTGGAGCCACAAGACAACCGAAAGCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX625212             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCTTCCTACGCCGGCGCTGGTTTGCTTCCCACTCCGAGCAGATTCACGCAAAGCCCGACGACGAAGCCCGTATCGCTGTTGCCCACACCGCCCGTCGCACAGTCGCTGCTGGGAGCGGCTCCTAGCCTTGTTCCGACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCACCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAACGAATCGAAGCTCGGACAACTTG CCCTGCCGCTGGCAACACCACCCGCTCAACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCGCAACACCGCAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCAGAAGGCAGTGGACAGTGTACCGCTCCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATGCGGATCAAGTGCAGAAGCGCAAATTGCTCTGGAGCCACAAGACAACCGAAAGCAAGGAGGTGTCTTCGAACATAAGCAAATGGGAGCAGGCAAAGTTTGCACAGGACACGGACGGTCGGGTTGCGTCGAAATTCCTGCGCCTAATGGGAGTGAAGGATGCAGCGCCCAAGCCGGGCGAGGAANGGGAATCGCCCGTTTCGACGGCAGGAGGAACCTCTTCGGCATCCC                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX608521             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGCCGGCGCTGGTTTGCTACCAACTCCGAGCAGATTTACGCAAAGCCCGACGACGAAGCCCGTATCGCTGTTGCCCACACCGCCCGTCGCACAGTCGCTGCTGGGAGCGGCTCCTAGCCTTGTCCCGACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCGCCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAATGAATCGAAGCTCGGACAGCTTG CCCTGCCGCTGACAACACCACCCGCTCAACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCGCAACACCGCAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCA AAGGCAGTGGACAGTGTACCGCTCCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATGCGGATCAAGTGCAGAAGCGCAAATTGCTCTGGAGCCACAAGACAACCGAAAGCAAGGAGGTGTCTTCGAACATAAGCAAATGGGAGCAGGCAAAGTTTGCACAGGACACGGACGGTCGGGTTGCGTCGAAATTCCTGCGCCTAATGGGAGTGAAGGATGCAGCGCCCAAGCCGGGCGAGGAAGGGGAATCGCCCGTTTCGACGGCAGTAGGAACCTCTTCGGCATCCCTCTCCGCAAAGGTAGGCTCCAGCTCAGGGGCGACGGGAGCGAGCGGCCCTTCAAATGGCGGCAAATCGACGGGAGACAGTATTAAGAAGCAGGAAGAACTGTTCTCGACGATGGAGCAGCAGTACGAAGTTGCCCGACAGGTGACACACACGATGCGTGGCGTTGGTCTCGGGTTTGGCTCTCAGGCCCG CCAGTTCTAATTGC                                                                                                                                                                ]
[+] EMBL BX622729             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CACCGCCCGTCGCACAGTCGCTGCTGGGAGCGGCTCCTAGCCTAGTCCCGACGGCAGGCATACCTTCTCTAATGAGCATCCCAACGAAACCGCCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAATGAATCGAAGCTCGGACAGCTTG CTCTGCCGCTGACAACACCACCCGCTCAACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCGCAACACCGCAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGGAGCAGAGCCAGAAGGCAGTGGACAGTGTACCGCTCCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATGCGGATCAAGTGCAGAAGCGCAAATTGCTCTGGAGCCACAAGACAACCGAAAGCAAGGAGGTGTCTTCGAACATAAGCAAATGGGAGCAGGCAAAGTTTGCACAGGACACGGACGGTCGGGTTGCGTCGAAATTCCTGCGCCTAATGGGAGTGAAGGATGCAGCGCCCAAGCCGGGCGAGGAANGGGAATCGCCCGTTTCGACGGCAGGAGGAACCTCTTCNGCATCCC                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS08T0B             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCCCGTCGCACAGTCGCTGCTGGGAGCGGCTCCTAGCCTTGTTCCGACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCACCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAACGAATCGAAGCTCGGACAACTTGCCCCTGCCGCTGGCAACACCACCCGCTCAACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCT  TGCGCAACACCGCAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCAGAAGGCAGTGGACAGTGTACCGCTCCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATGCGGATCAAGTGCAGAAGCGCAAATTGCTCTGGAACCACAAGACAACCGAAAGCAAGGAGGTGTCTTCGAACATAAGCAAATGGGAGCAGGCAAAGTTTGCACAGGACACGGACGGTCGGGTTGCGTCGAAATTCCTGCGCCTAATGGGAGTGAAGGATGCAGCGCCCAAGCCGGGCGAGGAAGGGGAATCGCCCGTTTCGACGGCAGGAGGAACCTCTTCGGCATCCCTCTCGGCAAAGGTAGGCTCCAGCTCAGGGGCGACGGGAGCGGGCGGCCCTTCAAATGGCGGCAAATCGACGGGAGACAGTATTAAGAAGCAGGAAGAACTGTTCTCGACGATGGAGCAGCAGTACGAAGTTGCCCGACAGGTGACACACACGATGCGTGGCGTTGGTCTCGGGTTTGGCTCTCAGGCCCGTTTTTTTCTAATTGCATAAGGCATTACCAACCATATGGCCATAGTTTGTTTTGTCCTTTTGCTTTTGCGCACGTAGAAGCTTTCGCTGTATAGTGTAGCAGAACCTTTGTTTTCGTGTCGCACGTGCGCATTCACGTGCTACAACAGCATCAAGATGAATAAACAAACGACGTGT]
[+] EMBL BX611380             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCGCCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAATGAATCGAAGCTCGGACAGCTTG CCCTGCCGCTGACAACACCACCCGCTCAACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCGCAACACCGCAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCAGAAGGCAGTGGACAGTGTACCGCTCCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATGCGGATCAAGTGCAGAAGCGCAAATTGCTCTGGAGCCACAAGACAACCGAAAGCAAGGAGGTGTCTTCGAACATAAGCCAATGGGAGCAGGCAAAGTTTGCACAGGACACGGACGGTCGGGTTGCGTCGAAATTCCTGCGCCTAATGGGAGTGAAGGATGCAGCGCCCAAGCCGGG                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX623680             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGGCATACCTTCTCTAATGAGCATCCCAACGAAACCGCCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAATGAATCGAAGCTCGGACAGCTTG CTCTGCCGCTGACAACACCACCCGCTCAACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCGCAACACCGCAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCAGAAGGCAGTGGACAGTGTACCGCTCCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATGCGGATCAAGTGCAGAAGCGCAAATTGCTCTGGAGCCACAAGACAACCGAAAGCAAGGAGGTGTCTTCGAACATAAGCAAATGGGAGCAGGCAAAGTTTGCACAGGACACGGACGGTCGGGTTGCGTCGAAATTCCTGCGCCTAATGGGAGTGAAGGATGCAGCGCCCAAGCCGGGCGAGGAAGGGGAATCGCCCGTTTCGACGGCAGGAGGAACCTCTTCGGCATCCCTCTCGGCAAAGGTAGGCTCCAGCTCAGGGGCGACGGGAGCGAGCGGCCCTTCAAATGGCGGCAAATCGACGGGAGACAGTATTAAGAAGCAGGAAGAACTGTTCTCGACGATGGAGCAGCAGTACGAAGTTGCCCGACAGGTGACACACACGATGCGTGGCGTTGGTCTCGGGTTTGGCTCTCAGGNCCG CCAGTTCT                                                                                                                                                                      ]
[+] EMBL BX614271             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CAGCCGTTGCCGCCAAACTGACCCTTTCGAATGAATCGAAGCTCGGACAGCTTG CCCTGCCGCTGACAACACCACCCGCTCAACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCGCAACACCGCAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCAGAAGGCAGTGGACAGTGTACCGCTCCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATGCGGATCAAGTGCAGAAGCGCAAATTGCTCTTGAGCCACAAGACAACCGAAAGCAAGGAGGTGTCTTCTAACATAAGCAAATGGGAGCAGGCAAAGTTTGCACAGGACACGGACGGTCGGGTTGCGTCGAAATTCCTGCGCCTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX610387             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GAAATTCCGGCGCCTAATGGGAGTGAAGGAAGCAGCGCCCAAGCCGGGCGAGGAAGGGGAATCGCCCGTTTCGACGGCAGGAGGAACCTCTGCGGCATCCCTCTCCGCAAAGGGAGGCTCCAGCCCAGGGGCGACGGGAGCGAGCGGCCCTCCAAAGGGCGGCAAATCGACGGGAGACAGGATTAAGAAGCAGGAAGAACGGGTCCCGACGAAGGAGCAGCAGTACGAAG                                                                                                                                                                                                                                            ]
[-] EMBL CNS08KUD             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CCAAGCCGGGCGAGGAAGGGGAATCGCCCGTTTCGACGGCAGGAGGAACCTCTTCGGCATCCCTCTCGGCAAAGGTAGGCTCCAGCTCAGGGGCGACGGGAGCGAGCGGCCCTTCAAATGGCGGCAAATCGACGGGAGACAGTATTAAGAAGCAGGAAGAACTGTTCTCGACGAT                                                                                                                                                                                                                                                             ]




>consensus_9332#0
CTTCCCATTTTAGAACTCATCATCGTCATCCTCGTCGTCGCGCACCTCGTCACGTTCTAA
CTCAACGGATGGTTCCCGCTGCTCGAAGTCTCCGTCCCGCAGCCCTTCGCCGGCATCGCG
ATCGAAACGGGCCAAAAATGGTGCTGATGAGCATAAATCGTACAAAAAAACATCATCCGG
GAAAAAGGATAGCAAGAACAGACAATCGAAATCGCCTTCGGGCGATCAGCGCCGTTCAGC
TGGCAACGGTAGTAACAATAAGAGTCCAATGAAAGCAGACCGGAAGGATAAAAGGAAATC
TTCCCCACCGAGATCAACGACGTGGGGGAGGGAATTGGAGCAAATCCAATGAGCGAAAAA
ATAATCGACGCGACTCTCGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGCG
GTCGAGACTACGACAAGGATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCACGCC
ACCGACGACGTCACTCACCAAACGAGCGAGTACCATCATCGAGAGCGCGCGATTCACGTT
CCCGCTCCCGATCCCGGTCAAGATCTGGCGCCAAGTCTTCGCCGCCTCGCACCAGTCAGC
AACAAACACCATCGACAAACGCTTCCTACGCCGGCGCTGGTTTGCTTCCCACTCCGAGCA
GATTCACGCAAAGCCCGACGACGAAGCCCGTATCGCTGTTGCCCACACCGCCCGTCGCAC
AGTCGCTGCTGGGAGCGGCTCCTAGCCTTGTTCCGACGGCAGGCATACCTTCCCTAATGA
GCATCCCAACGAAACCACCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGA
CCCTTTCGAATGAATCGAAGCTCGGACAGCTTGCCCTGCCGCTGACAACACCACCCGCTC
AACAAGATCCGGCCGTCACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCGCAACACCG
CAAAGGCGGCACAGCTCGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCAGAAGGCAG
TGGACAGTGTACCGCTCCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATG
CGGATCAAGTGCAGAAGCGCAAATTGCTCTGGAGCCACAAGACAACCGAAAGCAAGGAGG
TGTCTTCGAACATAAGCAAATGGGAGCAGGCAAAGTTTGCACAGGACACGGACGGTCGGG
TTGCGTCGAAATTCCTGCGCCTAATGGGAGTGAAGGATGCAGCGCCCAAGCCGGGCGAGG
AAGGGGAATCGCCCGTTTCGACGGCAGGAGGAACCTCTTCGGCATCCCTCTCGGCAAAGG
TAGGCTCCAGCTCAGGGGCGACGGGAGCGAGCGGCCCTTCAAATGGCGGCAAATCGACGG
GAGACAGTATTAAGAAGCAGGAAGAACTGTTCTCGACGATGGAGCAGCAGTACGAAGTTG
CCCGACAGGTGACACACACGATGCGTGGCGTTGGTCTCGGGTTTGGCTCTCAGGCCCGCC
AGTTCTAATTGCATAAGGCATTACCAACCATATGGCCATAGTTTGTTTTGTCCTTTTGCT
TTTGCGCACGTAGAAGCTTTCGCTGTATAGTGTAGCAGAACCTTTGTTTTCGTGTCGCAC
GTGCGCATTCACGTGCTACAACAGCATCAAGATGAATAAACAAACGACGTGT

consensusID : consensus_9332#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1013
fasta sequence

                              [CCGATTGCCGTCAAGCGGCTACCAATTCCTTTCGATCGTTTTAATAAACTTCCCTGTTCCCTTGTAGAGTCC-AATGAAAGCAGACCGGAAGGATAAAAAGAAATCTTCCCCACCGAGGCACGATGCCAGCAAGCACGACCGAAGCCAGTCCCGTGAGCGTGAGCGTAAAAATCGTGACAAGGATCGTGAGCGCGAGCGTGATCGCACACGAGAACGGGAGCGTGAACAGCGCAATCGTGACCGAGATCGGGAGCGAGAGCGCCAAAAGGATCGCCCGAAGGATCGTAACCGTGATCGTGAGCGTGAGCGCGAGCGGGAACGGGATAGAGACCGGGAACGTAGCCGTTATGATCGTGATCGTGGCTCGGCTCGGGACTCTCGCAGCGATTACCACCGAGATCAACGACGTGGGGGAGGGAATTGGAGCAAATCCAATGAGCGTGATAATAATCGACGCGACTCTCGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGCGGTCGAGACTACGACAAGGATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCACG-CCACCGACGACGTCACTCACCAAACGAGCGAGTACCATCATCGAGAGCGCGCGATTCACGTTCCCGCTCCCGGTCCCGGTCAAGATCTGGCGCCAAGTCTTCGCCGCCTCGCACCAGTCAGCAACAAACACCATCGACAAACGCTTCCTACGCCGGCGCTGGTTTGCTTCCCACTCCGAGCAGATTCACGCAAAGCCCGACGACGAAACCCGTATCGCTGTTGCCCACACCGCCCGTCGCACAGTCGCTGCTGGGAGCGGCTCCTAGCCTTGTCCCGACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCACCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAACGAATCGAAGCTCGGACAACTTGCCCTGCCGCTGACAACACCTCCCGCTCAACAAGATCCGGCCCGTCACGAGTGTG]

[+] EMBL BM604292             [CCGATTGCCGTCAAGCGGCTACCAATTCCTTTCGATCGTTTTAATAAACTTCCCTGTTCCCTTGTAGAGTCC AATGAAAGCAGACCGGAAGGATAAAAAGAAATCTTCCCCACCGAGGCACGATGCCAGCAAGCACGACCGAAGCCAGTCCCGTGAGCGTGAGCGTAAAAATCGTGACAAGGATCGTGAGCGCGAGCGTGATCGCACACGAGAACGGGAGCGTGAACAGCGCAATCGTGACCGAGATCGGGAGCGAGAGCGCCAAAAGGATCGCCCGAAGGATCGTAACCGTGATCGTGAGCGTGAGCGCGAGCGGGAACGGGATAGAGACCGGGAACGTAGCCGTTATGATCGTGATCGTGGCTCGGCTCGGGACTCTCGCAGCGATTACCACCGAGATCAACGACGTGGGGGAGGGAATTGGAGCAAATCCAATGAGCGTGATAATAATCGACGCGACTCTCGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGCGGTCGAGACTACGACAAGGATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCACGCCCACCGACGACGTCACTCACCAAACGAGCGAGTACCATCATCGAGAGCGCGCGATTCACGTTCCCGCTCCCGGTCCCGGTCAAGATCTGGCGCCAAGTCTTCGCCGC                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM602445             [                                                           gacccacgcGTCCGAATGAAAGCAGACCGGAAGGATAAAAAGAAATCTTCCCCACCGAGGCACGATGCCAGCAAGCACGACCGAAGCCAGTCCCGTGAGCGTGAGCGTAAAAATCGTGACAAGGATCGTGAGCGCGAGCGTGATCGCACACGAGAACGGGAGCGTGAACAGCGCAATCGTGACCGAGATCGGGAGCGAGAGCGCCAAAAGGATCGCCCGAAGGATCGTAACCGTGATCGTGAGCGTGAGCGCGAGCGGGAACGGGATAGAGACCGGGAACGTAGCCGTTATGATCGTGATCGTGGCTCGGCTCGGGACTCTCGCAGCGATTACCACCGAGATCAACGACGTGGGGGAGGGAATTGGAGCAAATCCAATGAGCGTGATAATAATCGACGCGACTCTCGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGCGGTCGAGACTACGACAAGGATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCACG CCACCGACGACGTCACTCACCAAACGAGCGAGTACCATC                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM583942             [                                                                                                                                                                                                                                                                                                                                                                                     ccgCTCTCGCAGCGATTACCACCGAGATCAACGACGTGGGGGAGGGAATTGGAGCAAATCCAATGAGCGTGATAATAATCGACGCGACTCTCGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGTGGTCGAGACTACGACAAGGATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCACG CCACCGACGACGTCACTCACCAAACGAGCGAGTACCATCGTCGAGAGCGCGCGATTCACGTTCCCGCTCCCGGTCCCGGTCAAGATCTGGCGCCAAGTCTTCGCCGCCTCGCACCAGTCAGCAACAAACACCATCGACAAACGCTTCCTACGCCGGCGCTGGTTTGCTTCCCACTCCGAGCAGATTCACGCAAAGCCCGACGACGAAACCCGTATCGCTGTTGCCCACACCGCCCGTCGCACAGTCGCTGCTGGGAGCGGCTCCTAGCCTTGTCCCGACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCACCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAACGAATCGAAGCTCGGACAACTTGCCCTGCCGCTGACAACACCTCCCGCTCAACAAGATCCGGCCCGTCACGAGTGTG]
[+] EMBL CNS08KUC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCTCGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGCGGTCGAGACTACGACAAGGATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]




>consensus_9332#1
CCGATTGCCGTCAAGCGGCTACCAATTCCTTTCGATCGTTTTAATAAACTTCCCTGTTCC
CTTGTAGAGTCCAATGAAAGCAGACCGGAAGGATAAAAAGAAATCTTCCCCACCGAGGCA
CGATGCCAGCAAGCACGACCGAAGCCAGTCCCGTGAGCGTGAGCGTAAAAATCGTGACAA
GGATCGTGAGCGCGAGCGTGATCGCACACGAGAACGGGAGCGTGAACAGCGCAATCGTGA
CCGAGATCGGGAGCGAGAGCGCCAAAAGGATCGCCCGAAGGATCGTAACCGTGATCGTGA
GCGTGAGCGCGAGCGGGAACGGGATAGAGACCGGGAACGTAGCCGTTATGATCGTGATCG
TGGCTCGGCTCGGGACTCTCGCAGCGATTACCACCGAGATCAACGACGTGGGGGAGGGAA
TTGGAGCAAATCCAATGAGCGTGATAATAATCGACGCGACTCTCGTGGATACGATCGAAA
GGATGATCGTAAGGATAGGAGAAGCGGTCGAGACTACGACAAGGATCACCGTAGAAGCCG
ACGCTCAGAATCACGCGAATCACGCCACCGACGACGTCACTCACCAAACGAGCGAGTACC
ATCATCGAGAGCGCGCGATTCACGTTCCCGCTCCCGGTCCCGGTCAAGATCTGGCGCCAA
GTCTTCGCCGCCTCGCACCAGTCAGCAACAAACACCATCGACAAACGCTTCCTACGCCGG
CGCTGGTTTGCTTCCCACTCCGAGCAGATTCACGCAAAGCCCGACGACGAAACCCGTATC
GCTGTTGCCCACACCGCCCGTCGCACAGTCGCTGCTGGGAGCGGCTCCTAGCCTTGTCCC
GACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCACCGATCAGCTCGCTGAT
TCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAACGAATCGAAGCTCGGACAACTTGC
CCTGCCGCTGACAACACCTCCCGCTCAACAAGATCCGGCCCGTCACGAGTGTG

consensusID : consensus_9332#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 259
fasta sequence

                              [CGGAAAAAGGATAGCAAGAACAGACAATCTAAATCGCCTTCGGGAGATCAGCGCCGTTCAGCTGGTAACGGTAGTAACAATAACAGTCCAATGAAAGCAGACCGGAAGGATAAAAGAAAATCTTCCCCACCGAGGCACGATGCCGGCAAGCACGACCGAAGCCAGTCCCGCGAGCGTGAGCGTAAAAATCGCGACAAGGATCGTGAGCGCGAGCGTGATCGCACACGTGAACGGGAGCGTGAACAGCGCAATCGTGACC]

[+] EMBL BX602593             [CGGAAAAAGGATAGCAAGAACAGACAATCTAAATCGCCTTCGGGAGATCAGCGCCGTTCAGCTGGTAACGGTAGTAACAATAACAGTCCAATGAAAGCAGACCGGAAGGATAAAAGAAAATCTTCCCCACCGAGGCACGATGCCGGCAAGCACGACCGAAGCCAGTCCCGCGAGCGTGAGCGTAAAAATCGCGACAAGGATCGTGAGCGCGAGCGTGATCGCACACGTGAACGGGAGCGTGAACAGCGCAATCGTGACC]




>consensus_9332#2
CGGAAAAAGGATAGCAAGAACAGACAATCTAAATCGCCTTCGGGAGATCAGCGCCGTTCA
GCTGGTAACGGTAGTAACAATAACAGTCCAATGAAAGCAGACCGGAAGGATAAAAGAAAA
TCTTCCCCACCGAGGCACGATGCCGGCAAGCACGACCGAAGCCAGTCCCGCGAGCGTGAG
CGTAAAAATCGCGACAAGGATCGTGAGCGCGAGCGTGATCGCACACGTGAACGGGAGCGT
GAACAGCGCAATCGTGACC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9332#1      ------CCGATTGCCGTCAAGCGGCTACC--AATTCCTTTCGATCGTTTTAATAAACTTC 52
consensus_9332#2      CGGAAAAAGGATAGCAAGAACAGACAATCTAAATCGCCTTCGGGAGATCAGCGCCGTTCA 60
consensus_9332#0      -------------------------------CTTCCCATTTTAGAACTCATCATCGTCAT 29
                                                       *  * **       *            

consensus_9332#1      CCTGTTCCC--TTGTAG-------AGTCCAATGAAAGCAGACCGGAAGGATAAAAAGAAA 103
consensus_9332#2      GCTGGTAACGGTAGTAACAATAACAGTCCAATGAAAGCAGACCGGAAGGATAAAAGAAAA 120
consensus_9332#0      CCTCGTCGTC-GCGCACCTCGTCACGTTCTAACTCAACGGATGGTTCCCGCTGCTCGAAG 88
                       **  *       * *         ** * *    * * **  *             ** 

consensus_9332#1      TCTTCCCCACCGAGGCACGATGCCAGCAAGCACGACCGAAGCCAGTCCCGTGAGCGTGAG 163
consensus_9332#2      TCTTCCCCACCGAGGCACGATGCCGGCAAGCACGACCGAAGCCAGTCCCGCGAGCGTGAG 180
consensus_9332#0      TCTCCGTC-CCGCAGCCCTTCGCCGGCAT-CGCGATCGAAACGGGCC----AAAAATGGT 142
                      *** *  * ***  ** *   *** ***  * *** **** *  * *     *   **  

consensus_9332#1      CGTAAAAATCGTGACAAGGATCGTGAGCGCGAGCGTGATCGCACACGAGAACGGGAGCGT 223
consensus_9332#2      CGTAAAAATCGCGACAAGGATCGTGAGCGCGAGCGTGATCGCACACGTGAACGGGAGCGT 240
consensus_9332#0      GCTGATGAGCATAA-----ATCGTACAAAAAAACATCATCCGGGA--AAAAGGATAGCAA 195
                        * *  * *   *     *****       * * * ***    *    ** *  ***  

consensus_9332#1      GAACAGCGCAATCGTGACCGAGATCGGGAGCGAGAGCGCCAAAAGGATCGCCCGAAGGAT 283
consensus_9332#2      GAACAGCGCAATCGTGACC----------------------------------------- 259
consensus_9332#0      GAACAG-ACAATCGAAATCGCCTTCGGGCG-ATCAGCGCCGTTCAGCTGGC---AACGGT 250
                      ******  ******  * *                                         

consensus_9332#1      CGTAACCGTGATCGTGAGCGTGAGCGCGAGCGGGAACGGGATAGAGACCGGGAACGTAGC 343
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      AGTAACAATAAGAGTCCA-ATGAAAGCAGACCGGAAGGATAAAAGGA------------- 296
                                                                                  

consensus_9332#1      CGTTATGATCGTGATCGTGGCTCGGCTCGGGACTCTCGCAGCGATTACCACCGAGATCAA 403
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      ---------------------------------------AATCTTCCCCACCGAGATCAA 317
                                                                                  

consensus_9332#1      CGACGTGGGGGAGGGAATTGGAGCAAATCCAATGAGCGTGATAATAATCGACGCGACTCT 463
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      CGACGTGGGGGAGGGAATTGGAGCAAATCCAATGAGCGAAAAAATAATCGACGCGACTCT 377
                                                                                  

consensus_9332#1      CGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGCGGTCGAGACTACGACAAG 523
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      CGTGGATACGATCGAAAGGATGATCGTAAGGATAGGAGAAGCGGTCGAGACTACGACAAG 437
                                                                                  

consensus_9332#1      GATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCACGCCACCGACGACGTCACTCA 583
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      GATCACCGTAGAAGCCGACGCTCAGAATCACGCGAATCACGCCACCGACGACGTCACTCA 497
                                                                                  

consensus_9332#1      CCAAACGAGCGAGTACCATCATCGAGAGCGCGCGATTCACGTTCCCGCTCCCGGTCCCGG 643
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      CCAAACGAGCGAGTACCATCATCGAGAGCGCGCGATTCACGTTCCCGCTCCCGATCCCGG 557
                                                                                  

consensus_9332#1      TCAAGATCTGGCGCCAAGTCTTCGCCGCCTCGCACCAGTCAGCAACAAACACCATCGACA 703
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      TCAAGATCTGGCGCCAAGTCTTCGCCGCCTCGCACCAGTCAGCAACAAACACCATCGACA 617
                                                                                  

consensus_9332#1      AACGCTTCCTACGCCGGCGCTGGTTTGCTTCCCACTCCGAGCAGATTCACGCAAAGCCCG 763
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      AACGCTTCCTACGCCGGCGCTGGTTTGCTTCCCACTCCGAGCAGATTCACGCAAAGCCCG 677
                                                                                  

consensus_9332#1      ACGACGAAACCCGTATCGCTGTTGCCCACACCGCCCGTCGCACAGTCGCTGCTGGGAGCG 823
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      ACGACGAAGCCCGTATCGCTGTTGCCCACACCGCCCGTCGCACAGTCGCTGCTGGGAGCG 737
                                                                                  

consensus_9332#1      GCTCCTAGCCTTGTCCCGACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCA 883
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      GCTCCTAGCCTTGTTCCGACGGCAGGCATACCTTCCCTAATGAGCATCCCAACGAAACCA 797
                                                                                  

consensus_9332#1      CCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAACGAATCG 943
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      CCGATCAGCTCGCTGATTCCTCCAGCCGTTGCCGCCAAACTGACCCTTTCGAATGAATCG 857
                                                                                  

consensus_9332#1      AAGCTCGGACAACTTGCCCTGCCGCTGACAACACCTCCCGCTCAACAAGATCCGGCCCGT 1003
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      AAGCTCGGACAGCTTGCCCTGCCGCTGACAACACCACCCGCTCAACAAGATCCGGCC-GT 916
                                                                                  

consensus_9332#1      CACGAGTGTG-------------------------------------------------- 1013
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      CACGAGTGTGCTACTGTCCCGGAGTGCGCTGCTGCGCAACACCGCAAAGGCGGCACAGCT 976
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      CGAGAAGATGGGGATCGATGTGTTGCAGCAGAGCCAGAAGGCAGTGGACAGTGTACCGCT 1036
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      CCCGTCCTACTACAACCCGGGCGTGGTGAATCCGGTCCGGTATGCGGATCAAGTGCAGAA 1096
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      GCGCAAATTGCTCTGGAGCCACAAGACAACCGAAAGCAAGGAGGTGTCTTCGAACATAAG 1156
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      CAAATGGGAGCAGGCAAAGTTTGCACAGGACACGGACGGTCGGGTTGCGTCGAAATTCCT 1216
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      GCGCCTAATGGGAGTGAAGGATGCAGCGCCCAAGCCGGGCGAGGAAGGGGAATCGCCCGT 1276
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      TTCGACGGCAGGAGGAACCTCTTCGGCATCCCTCTCGGCAAAGGTAGGCTCCAGCTCAGG 1336
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      GGCGACGGGAGCGAGCGGCCCTTCAAATGGCGGCAAATCGACGGGAGACAGTATTAAGAA 1396
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      GCAGGAAGAACTGTTCTCGACGATGGAGCAGCAGTACGAAGTTGCCCGACAGGTGACACA 1456
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      CACGATGCGTGGCGTTGGTCTCGGGTTTGGCTCTCAGGCCCGCCAGTTCTAATTGCATAA 1516
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      GGCATTACCAACCATATGGCCATAGTTTGTTTTGTCCTTTTGCTTTTGCGCACGTAGAAG 1576
                                                                                  

consensus_9332#1      ------------------------------------------------------------
consensus_9332#2      ------------------------------------------------------------
consensus_9332#0      CTTTCGCTGTATAGTGTAGCAGAACCTTTGTTTTCGTGTCGCACGTGCGCATTCACGTGC 1636
                                                                                  

consensus_9332#1      ------------------------------------
consensus_9332#2      ------------------------------------
consensus_9332#0      TACAACAGCATCAAGATGAATAAACAAACGACGTGT 1672