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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9337#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1811 fasta sequence
[CCGAGCATCCGCCGCGTTTGGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCACGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGGTGCTGCTTGCAGCGAACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCGGTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACGATATACAGGACTGTGCCGACGGCAGCGACG-AGTCTGGATGTGATTACTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCGAG-CCGGTGCGACGG-CCAGCGGGACTGTCT-CGGC-GGGGACGACGAGGAGAACTGCGACAACTACGAGGTGCCGCACCGGGCGCCCCTCTGCAGCAAGGCGGAGTTTACCTGCACCGATCGGGCCTGCATCCCGGCCGACCTGGTGTGCGACGGCGTCCAGCACTGTCTGGACGGGTCGGACGAAACGATCGGCTGCATCGACATCGCAGGGAAGTGCAAGGGCTTCCTGTGCCGCAACAAGCACTGCCTGCAGTCGCACCACTGGGTGTGCGACGGGCTGGACGACTGTGGCGACGGCTCGGACGAGGAGCACTGCCTGAGCGAGTGTACGCTCGAGCACGGGAAGTACGAGTGCGCGAACAACCACACCTGCGTGGACGTGACGCAGGTGTGCAACGGGGCGGACGATTGCGGCGACGGCAGCGACGAGGGCCCGGGCTGTAAGGTGCCGGCGGACGGTTGCAAGGCGCTGCACTGCGCGCCGCAGACGTGCAAGGTGCTGCCGGACGGGAAGCCGGTCTGCCTGTGCGGCGTCGGCTTCCGGTTCGAGCCGAGCGCGGGCCGGTGCGTGGACGTGAACGAGTGCGCCCGGTACGGGCTGTGCTCGCAGGGCTGCATCAACACGCCCGGCTCGTTCCGCTGCACCTGCATCGACCAGTTCCACCTGATGCGGGACGGGCGCACGTGCGAGCTGTCGTCCGGAACGGAGGCGCTGATGCTGTACACCACCCAGAAGGCTGTCGGTGCGATGTACCTGACCTCGCTGCACCAGTACTACGTCGCGAAGGAGCTGTCGCAGGTGATCGGCGTGGCGTACGACGGCAGCCACGTGTACTGGACGGACATCTCGCACAAGACGGAGTCCGATCGAGCGGTCGCTGGAGGACGGCAGCGACCGGGTGCAGCTGCTCACCGCCGGCCTGATCTCGCCCGAGGACATCGCGCTCGACTGGCTGACCGGGAACATCTACTTCAGCGACAGCGGCCAGATGGCACATTGCCGTCTGCTCGAGCGACGGCTACCACTTGCCGGGCGATCGTGCAGGACGAGCTGCACAAGCCCGCGCGGGATCGCGCTGCTGCCGCAAAACGGTACGCTGTTCTACAGCGACTGGGGCAACAACGCGATGATCGGGCGGGGCCCCGGATGGACGGTACCGAGCAGCAGGTCGTCGTCAGCGACGGCATCCACTTGGCCGAACGGGCTGACGCTCGACTGGCCCAACC]
[+] EMBL BM603173 [CCGAGCATCCGCCGCGTTTGGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCACGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGGTGCTGCTTGCAGCGAACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCGGTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACGATATACAGGACTGTGCCGACGGCAGCGACG AGTCTGGATGTGATTACTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCGAG CCGGTGCGACGG CCAGCGGGACTGTCT CGGC GGGGACGACGAGGAGAACTGCGACAACTACGAGGTGCCGCACCGGGCGCCCCTC ]
[+] EMBL BM609693 [CCG GCATCCGCCGCGTTTGGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCGCGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGGTGCTGCTTGCAGCGAACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCGGTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACGATATACAGGACTGTGCCGACGGCAGCGACGAAGTCTGGATGTGATTACTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCGAGCCCGGTGCGACGGCCCAGCGGGACTGTCTCCGGCGGGGGACGACGAGGAG ]
[+] EMBL BM616537 [ ccgATCCGCCGCGTTTGGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCACGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGGTGCTGCTTGCAGCGAACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCGGTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACGATATACAGGACTGTGCCGACGGCAGCGACG AGTCTGGATGTGATTACTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCAT ]
[+] EMBL BM599084 [ ccgCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCGCGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGGTGCTGCTTGCAGCGAACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCGGTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACGATATACAGGACTGTGCCGACGGCAGCGACG AGTCTGGATGTGATTACTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCGAG CCGG ]
[+] EMBL BM606564 [ ccgGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCGAG CCGGTGCGACGG CCAGCGGGACTGTCT CGGC GGGGACGACGAGGAGAACTGCGACAACTACGAGGTGCCGCACCGGGCGCCCCTCTGCAGCAAGGCGGAGTTTACCTGCACCGATCGGGCCTGCATCCCGGCCGACCTGGTGTGCGACGGCGTCCAGCACTGTCTGGACGGGTCGGACGAAACGATCGGCTGCATCGACATCGCAGGGAAGTGCAAGGGCTTCCTGTGCCGCAACAAGCACTGCCTGCAGTCGCACCACTGGGTGTGCGACGGGCTGGACGACTGTGGCGACGGCTCGGACGAGGAGCACTGCCTGAGCGAGTGTACGCTCGAGCACGGGAAGTACGAGTGCGCGAACAACCACACCTGCGTGGACGTGACGCAGGTGTGCAACGGGGCGGACGATTGCGGCGACGGCAGCGACGAGGGCCCGGGCTGTAAGGTGCCGGCGGACGGTTGCAAGGCGCTGCACTGCGCGCCGCAGACGTGCAAGGTGCTGCCGGACGGGAAGCCGGTCTGCCTGTGCGGCGTCGGCTTCCGGTTCGAGCCGAGCGCGGGCCGGTGCGTGGACGTGAACGAGTGCGCCCGGTACGGGCTGTGCTCGCAGGGCTGCATCAACACGCCCGGCTCGTTCCG ]
[+] EMBL BM584090 [ CCGGTTCGAGCCGAGCGCGGGCCGGTGCGTGGACGTGAACGAGTGCGCCCGGTACGGGCTGTGCTCGCAGGGCTGCATCAACACGCCCGGCTCGTTCCGCTGCACCTGCATCGACCAGTTCCACCTGATGCGGGACGGGCGCACGTGCGAGCTGTCGTCCGGAACGGAGGCGCTGATGCTGTACACCACCCAGAAGGCTGTCGGTGCGATGTACCTGACCTCGCTGCACCAGTACTACGTCGCGAAGGAGCTGTCGCAGGTGATCGGCGTGGCGTACGACGGCAGCCACGTGTACTGGACGGACATCTCGCACAAGACGGAGTCCGATCGAGCGGTCGCTGGAGGACGGCAGCGACCGGGTGCAGCTGCTCACCGCCGGCCTGATCTCGCCCGAGGACATCGCGCTCGACTGGCTGACCGGGAACATCTACTTCAGCGACAGCGGCCAGATGGCACATTGCCGTCTGCTCGAGCGACGGCTACCACTTGCCGGGCGATCGTGCAGGACGAGCTGCACAAGCCCGCGCGGGATCGCGCTGCTGCCGCAAAACGGTACGCTGTTCTACAGCGACTGGGGCAACAACGCGATGATCGGGCGGGGCCCCGGATGGACGGTACCGAGCAGCAGGTCGTCGTCAGCGACGGCATCCACTTGGCCGAACGGGCTGACGCTCGACTGGCCCAACC]
consensusID : consensus_9337#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1409 fasta sequence
[TTTTCCAGCATCCGCCGCTTTTTGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAG-TGTGTGAGTGGCGCTGTGCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCGCGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGATGCTGTACACCACCCAGAAGGCGGTCGGTGCGATGTATCCCACCTCGCTGCACCAGTACTACGTCGCGAAGGAGCGTGTACGAGAACCAGGCGCTGGTGGTGAACCGGGCCCCGCCCGGCTCGATCGGCCAGTGCCAGCTGTACGGCCAGTACCGGTGCGAGCCGTACCGCGTGAACGTGCCGCCGACCGGACTGCTGCTGGTCGTGCAGGAATCGCGCCACCGATGGTGCCGAACGTGTGCGACCGGGCCAACTGCACG-CATCTGTGCGTGGCCGTCGGGCCGGTCGCTCGCTGCATCTGCGAGAACGGGCTGGAGATAGCGGAGGGCGATCGGTGTGCCGAGCCGAAGATGGGGGCCCGCGCGATGAAACCGTACCGCGGCACCGTGCTGGTTGGGGCGGCA-CGCGGGCGCA-CAAACGACAGACGGTGCCGACGACGAAGGGGCCGGCTGGCTGGCCGGCCTGCTGCACGTGCTGCTGTACGTGACGCTCGTGGGTGCGACGATCGGGGCCGGGTGGTACGTCTATCGCCAGCGGTTCCAGCACAAGTTTGACGTCGGCATACACTTCAACAACACCGAGCTGAGCACGAGCGAGTACGCGCAGGTGGAGCTGTGCAAGGTGGAGGGAAGGAACGTGCTCACGCTGGTGCAGCATCCGGCCGAGGCGGACGCGCTGTCGGCGATCAGCGGCGCCACGGACGGCAACGGGCCGGACATACAGAACTTTGCGGTCGGCTCGACCGACACGCCGTACTACAACTGCGACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATGCACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACCCTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACTTTCTGCTGGAATATGTGTATGTTTTAGAACGTAAAATAAAACATTCCGCATCCGTTCGTGCT-GGGAACCGAGTGGATGTAGCTAGATTTAAACAAAAAAAAAAAAAAAACGGACGCGTGGGCGG]
[+] EMBL CNS09FYA [TTTTCCAGCATCCGCCGCTTTTTGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAG TGTGTGAGTGGCGCTGTGCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGAT ]
[+] EMBL CNS09D80 [ agATCCGCCGCTTTTTGTCGTGT CTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGC AG TGTGTGAGTGGCGCTGTGCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCGCGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGATGCTGTACACCACCCAGAAGGCGGTCGGTGCGATGTATCCCACCTCGCTGCACCAGTACTACGTCGCGAAGGAGCGTGTACGAGAACCAGGCGCTGGTGGTGAACCGGGCCCCGCCCGGCTCGATCGGCCAGTGCCAGCTGTACGGCCAGTACCGGTGCGAGCCGTACCGCGTGAACGTGCCGCCGACCGGACTGCTGCTGGTCGTGCAGGAATCGCGCCACCGATGGTGCCGAACGTGTGCGACCGGGCCAACTGCACG CATCTGTGCGTGGCCGTCGGGCCGGTCGCTCGCTGCATCTGCGAGAACGGGCTGGAGATAGCGGAGGGCGATCGGTGTGCCGAGCCGAAGATGGGGGCCCGCGCGATGAAACCGTACCGCGGCACCGTGCTGGTTGGGGCGGCA CGCGGGCGCA CAAACGACAGACGGTGCCGACGACGAAGGGGCCGGCTGGCTGGCCGGCCTGCTGCACGTGCTGCTGTACGTGACGCTCGTGGGTGCGACGA ]
[+] EMBL CNS09D97 [ TCCGCCGCTTTTTGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGTGAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGTACAGCGAGTTGTGTGAGTGGCGCTGTGCCCCGCGTACATGCGTTTCGTACTGTCCCAGCAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTGTTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTTGCCGCGACAAATATGCGGTTAGTGGTGTTAGTGGCGACGGTGATGCTGTACACCACCCAGAAGGCGGTCGGTGCGATGTACCTGACCTCGCTGCACCAGTACTACGTCGCGAAGGAGCGTGTACGAGAACCAGGCGCTGGTGGTGAACCGGGCCCCGCCCGGCTCGATCGGCCAGTGCCAGCTGTACGGCCAGTACCGGTGCGAGCCGTACCGCGTGAACGTGCCGCCGACCGGACTGCTGCTGGTCGTGCAGGAATCGCGCCACCGATGGTGCCGAACGTGTGCGACCGGGCCAACTGCACGACATCTGTGCGTGGCCGTCGGGCCGGTCGCTCGC ]
[+] EMBL BX620597 [ GAT GGGGCCCGCGCGATGAAACCGTACCGCGGCACCGTGCTGGTTGGGGCGGCAGCGCCGGCGCAGCCAACGACAGACGGTGCCGACGACGAAGGGGCCGGCTGGCTGGCCGGCCTGCTGCACGTGCTGCTGTACGTGACGCTCGTGGGTGCGACGGTCGGGGCCGGGTGGTACGTCTATCGCCAGCGGTTCCAGCACAAGTTTGACGTCGGCATACACTTCAACAACACCGAGCTGAGCACGAGCGAGTACGCGCAGGTGGAGCTGTGCAAGGTGGAGGGAAGGAACGTGCTCACGCTGGTGCAGCATCCGGCCGAGGCGGACGCGCTGTCGGCGATCAGCGGCGCCACGGACGGCAACGGGCCGGACATACAGAACTTTGCGGTCGGCTCGACCGACACGCCGTACTACAACTGCGACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATGCACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACCCTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACTTTCTGCTGGAAT ]
[-] EMBL BM583599 [ GGGCCCGGGTGGTACGTCTATCGCCAGCGGTTCCAGCACAAGTTTGACGTCGGCATACACTTCAACAACACCGAGCTGAGCACGAGCGAGTACGCGCAGGTGGAGCTGTGCAAGGTGGAGGGAAGGAACGTGCTCACGCTGGTGCAGCATCCGGCCGAGGCGGACGCGCTGTCGGCGATCAGCGGCGCCACGGACGGCAACGGGCCGGACATACAGAACTTTGCGGTCGGCTCGACCGACACGCCGTACTACAACTGCGACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATGCACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACCCTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACTTTCTGCTGGAATATGTGTATGTTTTAGAACGTAAAATAAAACATTCCGCATCCGTTCGTGCTGGGGAACCGAGTGGATGTAGCTAGATTTAAACAAAAAAAAAAAAAAAACGGACGCGTGGGCGG]
[-] EMBL CNS09OW5 [ AGCGGTTCCAGCACAAGTTTGACGTCGGCATACACTTCAACAACACCGAGCTGAGCACGAGCGAGTACGCGCAGGTGGAGCTGTGCAAGGTGGAGGGAAGGAACGTGCTCACGCTGGTGCAGCATCCGGCCGAGGCGGACGCGCTGTCGGCGATCAGCGGCGCCACGGACGGCAACGGGCCGGACATACAGAACTTTGCGGTCGGCTCGACCGACACGCCGTACTACAACTGCGACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATGCACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACCCTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACTTTCTGCTGGAATATGTGTATGTTTTAGAACGTAAAATAAAACATTCCGCATCCGTTCGTGCT GGGAACCGA ]
[-] EMBL CNS09D98 [ GACACGCCGTACTACAACTGCGACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATGCACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACCCTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACTTTCTGCTGGAATATGTGTATGTTTTAGAACGTAAAATAAAACATTCCGCATCCGTTCGTGCT GGGAACCGAGTGGGTGTAGC ]
consensusID : consensus_9337#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 613 fasta sequence
[CCGCCCACGCGTCCGTGCGCGAATCACACCTGCACCCATCTCTGTCTGCTCACCTCGAACGCGACGTACGCGTGCGCCTGCCCGCAAGGAATGGAGCTGTCGCGGGACAAGCACAGCTGCGCCAGTGTCGCCAAGCGGCAGGACATCCTGCTCGGCATCGGCCACTATCTGGTGACGCTCAAGCATCACCCGTTCGGGCGGCATGCGACGGGGCGCGGAGAACCGCTGCCGGTCGCCACGATCAGCCGGCTCGCGTTCAACAGCCTGACTGGCGAGCTGTTCGTCGCGGACAACAGCCGCCGGGCGATCTACACGGTCGAGCTCGGGTCGCTCCGCACCCAGCGGCTGGTCCGGAGCGGCATCGGCCGGATAACAGCACTCGCTTTCGACTACCTAAGCAACACGCTGTACTGGTCCGACGCGGAACGGTCCACTATTGAGATATATAGTTTGCAGACCCGGCATCGTTCGATCATTCAGCACTACCTCGGGGACGATGCGCCGGTCGCACTCGCGCTCATCCCCGAGACGGGCAAGATGTTCGTGGCGCTCCGGTCGCCCTCCGGCCACACGCACATCGACCGGCAGGACATGACCGGCCGTGGTCCGCACA]
[+] EMBL BM612880 [CCGCCCACGCGTCCGTGCGCGAATCACACCTGCACCCATCTCTGTCTGCTCACCTCGAACGCGACGTACGCGTGCGCCTGCCCGCAAGGAATGGAGCTGTCGCGGGACAAGCACAGCTGCGCCAGTGTCGCCAAGCGGCAGGACATCCTGCTCGGCATCGGCCACTATCTGGTGACGCTCAAGCATCACCCGTTCGGGCGGCATGCGACGGGGCGCGGAGAACCGCTGCCGGTCGCCACGATCAGCCGGCTCGCGTTCAACAGCCTGACTGGCGAGCTGTTCGTCGCGGACAACAGCCGCCGGGCGATCTACACGGTCGAGCTCGGGTCGCTCCGCACCCAGCGGCTGGTCCGGAGCGGCATCGGCCGGATAACAGCACTCGCTTTCGACTACCTAAGCAACACGCTGTACTGGTCCGACGCGGAACGGTCCACTATTGAGATATATAGTTTGCAGACCCGGCATCGTTCGATCATTCAGCACTACCTCGGGGACGATGCGCCGGTCGCACTCGCGCTCATCCCCGAGACGGGCAAGATGTTCGTGGCGCTCCGGTCGCCCTCCGGCCACACGCACATCGACCGGCAGGACATGACCGGCCGTGGTCCGCACA]
consensusID : consensus_9337#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 513 fasta sequence
[GCGCCGCTGATCGCCGACAGCGCGTCCGCCTCGGCCGGATGCTGCCACAGCGTGACACGTCCCTTCCCTCCACCTTGCACAGCTCCACCTGCGCGTACTCGCTCGTGCTCAGCTCGGTGTTGTTGAAGTGTATGCCGACGTCAAACTTGTGCTGCCTAGCCGCTCCTCGATGACGTGCGTTTGCGGACCACGGCCGGTCATGTCCTGCCGGTCGATGTGCGTGTGGCCGGAGGCGACCGGAGCGCCACGAACATCTTGCCCGTCTCGGGGATGAGCGCGAGTTCGACCGGCGCATTGTCCCCGAGGTAGTGCTGAATGATCGAACGATGCCGGGTCTGCAAACTATATATCTCAATAGTGGACCGTTCCGCGTCGGACCAGTACAGCGTGTTGCTTAGGTAGTCGAAAGCGAGTTCTGTTATCCGGCCGATGCCGCTCCGGACCAGCCGCTGGGTGCGGACGACCCGAGCTCGACCGTGTAGATCGCCCTCCTACTCACTGGGGTCTCATCGC]
[+] EMBL CNS09D81 [GCGCCGCTGATCGCCGACAGCGCGTCCGCCTCGGCCGGATGCTGCCACAGCGTGACACGTCCCTTCCCTCCACCTTGCACAGCTCCACCTGCGCGTACTCGCTCGTGCTCAGCTCGGTGTTGTTGAAGTGTATGCCGACGTCAAACTTGTGCTGCCTAGCCGCTCCTCGATGACGTGCGTTTGCGGACCACGGCCGGTCATGTCCTGCCGGTCGATGTGCGTGTGGCCGGAGGCGACCGGAGCGCCACGAACATCTTGCCCGTCTCGGGGATGAGCGCGAGTTCGACCGGCGCATTGTCCCCGAGGTAGTGCTGAATGATCGAACGATGCCGGGTCTGCAAACTATATATCTCAATAGTGGACCGTTCCGCGTCGGACCAGTACAGCGTGTTGCTTAGGTAGTCGAAAGCGAGTTCTGTTATCCGGCCGATGCCGCTCCGGACCAGCCGCTGGGTGCGGACGACCCGAGCTCGACCGTGTAGATCGCCCTCCTACTCACTGGGGTCTCATCGC]
consensusID : consensus_9337#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 101 fasta sequence
[CCGCCCACGCGTCCGTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCCAGCCGGTGCGACGGCCACCGGGA]
[+] EMBL BM607351 [CCGCCCACGCGTCCGTTTCTCTGCAGGGCGCCGTTCTGGTACCGGTGCCGGCACGAGTCGACCTGCATCAGCGGCTCCAGCCGGTGCGACGGCCACCGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9337#0 ---CCGAGCATCCGCCGCGTTTGGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGT 57
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 TTTTCCAGCATCCGCCGCTTTTTGTCGTGTCCTCCCGTGTCCTCTGCCAGGGTCCTCTGT 60
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 GAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGT 117
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 GAGTGTGTTGGTGTGTGTACTGTGGTATCGTGTACGCGTTGGAATCGTGTAAAACCGCGT 120
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 ACAGCGAGTGTGTGAGTGGCGCTGTGCGCCCCCGCGTACATGCGTTTCGTACTGTCCCAG 177
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 ACAGCGAGTGTGTGAGTGGCGCTGTGC---CCCGCGTACATGCGTTTCGTACTGTCCCAG 177
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 CAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTG 237
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 CAAACCAAACGGTTTTTTTTTTGGGATTTGGATGGTGTAGAGGTTAAGTGTGCGTGTGTG 237
consensus_9337#2 ---------------------------------------CCGCCCACGCGTCCGTGCGCG 21
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 TTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTT 297
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 TTAAGGTGTTCGATTTGTGGCAGCAACACGAGGCAGGAGGGCGAAAAACGGAATCCTTTT 297
consensus_9337#2 AATCACACCTGCACCCATCTCTGTC-TGCTCACCTCGAACGCGACGTACGCGTGCGCCTG 80
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 GCCACGACAAATATGCGGTTAGTGGTGTTAGTG--GCGACGGTGGTGCTGCTTGCAGCGA 355
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 GCCGCGACAAATATGCGGTTAGTGGTGTTAGTG--GCGACGGTGATGCTGTACACCACCC 355
consensus_9337#2 CCCGCAAGGAATGGAGCTGTCGCGGGACAAGCACAGCTGCGCCAGTGTCGCCAAGCGGCA 140
consensus_9337#3 -----------------------------------------GCGCCGCTGATCGCCGACA 19
consensus_9337#0 ACGTTAGTGCCGGGAAAGTGGAGTCGGAAAAGAAGAGCACGGCCGCCAGCAAATCGTGCG 415
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 AGAAGGCGGTCGGTGCGATGTATCCCACCTCGCTG--CACCAGTACTACGTCGCGAAGGA 413
consensus_9337#2 GGACATCCTGCTCGGCATCGGCCACTATCTGGTGACGCTCAAGCATCACCCGTTCGGGCG 200
consensus_9337#3 GCGCGTCCGCCTCGGC--CGGATGCTGCCACAGCG-----TGACACGTCCCTTCCCTCCA 72
consensus_9337#0 GTGCACACGAGTTCCAGTGCGAAAATGGGGCCTGCATACCTGCCGCCGGCCACTGCAACG 475
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 GCGTGTACGAGAACCAG-GCGCTGGTGGTGAACCGGGCCCCGC--CCGGCTCGATCGGCC 470
consensus_9337#2 GCATGCGACGGGGC----------GCGGAGAACCGCTGCCGGT---CGCCACGATCAGCC 247
consensus_9337#3 CCTTGCACAGCTCC-------------ACCTGCGCGTACTCGCTCGTGCTCAGCTCGGTG 119
consensus_9337#0 ATATACAGGACTGTGCCGACGGCAGCGACGAGTCTGGATGTGATTAC-TTTCTCTGCAGG 534
consensus_9337#4 ---------------------------------CCGCCCACGCGTCCGTTTCTCTGCAGG 27
consensus_9337#1 AGTGCCAGCTGTACGGCCAGTACCGGTGCGAGCCGTACCGCGTGAACGTGCCGCCG---- 526
consensus_9337#2 GGCTCGCGTTCAACAGCCTG-ACTGGCGAGCTGTTCGTCGCGGACAACAGCCGCCG---- 302
consensus_9337#3 TTGTTGAAGTGTATGCCGACGTCAAACTTGTGCTGCCTAGCCGCTCCTCGATGACGTGCG 179
*
consensus_9337#0 GCGCCGTTCTGGTACCGGTGCCGGCACG--AGTCGACCTGCATC-AGCGGC-TCGAGCCG 590
consensus_9337#4 GCGCCGTTCTGGTACCGGTGCCGGCACG--AGTCGACCTGCATC-AGCGGC-TCCAGCCG 83
consensus_9337#1 --ACCGGACTGCTGCTGGT-CGTGCAGG--AATCGCGC--CACC-GATGGTGCCGAACGT 578
consensus_9337#2 --GGCGATCTACA--CGGT-CGAGCTCG--GGTCGCTCCGCACCCAGCGGC--TGGTCCG 353
consensus_9337#3 TTTGCGGACCACGGCCGGTCATGTCCTGCCGGTCGATGTGCGTGTGGCCGGAGGCGACCG 239
** * *** * * *** * * *
consensus_9337#0 GTGCGAC--GGCCAGCGGGAC-TGTCTCGGCGGGGACGACGAGGAGAACTGC-GACAA-C 645
consensus_9337#4 GTGCGAC--GGCCACCGGGA---------------------------------------- 101
consensus_9337#1 GTGCGACCGGGCCAACTGCACGCATCTGTGCGTGGCCGTCGGGCCGGTCGCT-CGCTG-C 636
consensus_9337#2 GAGCGGC---ATCGGCCGGATAACAGCACTCGCTTTCGACTACCTAAGCAACACGCTG-T 409
consensus_9337#3 GAGCGCCACGAACATCTTGCCCGTCTCGGGGATGAGCGCGAGTTCGACCGGCGCATTGTC 299
* *** * * *
consensus_9337#0 TACGAGGTGCCGCACCGGGCGCCCCTCTGCAGCAAGGCGGAGTTTACCTGCACCGATCGG 705
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 ATCTGCGAGAACGGGCTGGAGATAGCGGAGGGCGATC---GGTGTGCCGAGCCGAAGATG 693
consensus_9337#2 ACTGGTCCGACGCGGAACGGTCCACTATTGAGATATAT--AGTTTGCAGACCCGGCATCG 467
consensus_9337#3 CCCGAGGTAGTGCTGAATGATCGAACGATGCCGGGTCTGCAAACTATATATCTCAATAGT 359
consensus_9337#0 GCCTGCATCCCGGCCGACCTGGTGTGCGACGGCGT-CCAGCACTGTCTGGACGGGTCGGA 764
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 GGGGCCCGCGCGATGAAACCGTACCGCGGCACCGTGCTGGTTGGGGCGGCACGCGGGCGC 753
consensus_9337#2 TTCGATCATTCAGCACTACC--TCGGGGACGATGCGCCGGTCGCACTCGCGCTCATCCCC 525
consensus_9337#3 GGACCGTTCCGCGTCGGACCAGTACAGCGTGTTGC-TTAGGTAGTCGAAAGCGAGTTCTG 418
consensus_9337#0 CGAAACGATCGGCTGCATCGACATCGCAGGGAAGTGCAAGGGCTTCCTGTGCCGCAACAA 824
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 ACAAACGACAGACGGTGCCGACGACGAAGGGGCCGGC--TGGCTGGCCGGCCTGCTGCAC 811
consensus_9337#2 GAGACGGGCAAGATGT-TCGTGGCGCTCCGGTCGCCCTCCGGCCACACGCACATCGACCG 584
consensus_9337#3 TTATCCGGCCGATGCCGCTCCGGACCAGCCGCTGGGTGCGGACGACCCGAGCTCGACCGT 478
consensus_9337#0 GCACTGCCTGCAGTCGCACCACTGGGTGTGCGA--CGGGCTGGACGACTGTGGCGACGGC 882
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 GTGCTGCTGTACGTGACGCTCGTGGGTGCGACGATCGGGGCCGGGTGGTACGTCTATCGC 871
consensus_9337#2 GCAGGACATGAC-CGGCCGTGGTCCGCACA------------------------------ 613
consensus_9337#3 GTAGATCGCCCTCCTACTCACTGGGGTCTCATCGC------------------------- 513
consensus_9337#0 TCGGACGAGGAGCACTGCCTGAGCGAGTGTACGCTCGAGCACGGGAAGTACGAGTGCGCG 942
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 CAGCGGTTCCAGCACAAGTTTGACGTCGGCATACACTTCAACAACACCGAGCTGAGCACG 931
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 AACAACCACACCTGCGTGGACGTGACGCAGGTGTGCAACGGGGCGGACGATTGCGGCGAC 1002
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 AGCGAGTACGCGCAGGTGGAGCTGTGCAAGGTGGA----GGGAAGGAACGTGCTCACGCT 987
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 GGCAGCGACGAGGGCCCGGGCTG-TAAGGTGCCGGCGGACGGTTGCAAGGCGCTGCACTG 1061
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 GGTGCAGCATCCGGCCGAGGCGGACGCGCTGTCGGCGATCAGCGGCGCCACGGACGGCAA 1047
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 CGCGCCGCAGACGTGCAAGGTGCTGCCGGACGGGAAGCCGGTCTGCCTGTGCGGCGTCGG 1121
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 CGGGCCG--GACATACAGAACTTTGCGGTCGGCTCGACCGACACGCCGTACTACAACTGC 1105
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 CTTCCGGTTCGAGCCGAGCGCGGGCCGGTGCGTGGACGTGAACGAGTGCGCCCG-GTACG 1180
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 GACGACGATCTGCACGAGCGGCTGATCGTTTGAGGGGTTCCGCGAGCGCCTAAATGTATG 1165
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 GGCTGTGCTCGCAGGGCTGCATCAACACGCCCGGCTCGTTCCGCTGCACCTGCATCGACC 1240
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 CACTTGGGCCCCGGGGGTAGAGCAATGGGTGTTGTTTTTGTTGTTGTTGTGCTTTTAACC 1225
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 A--GTTCCACCTGATGCGGGACGGGCGCACGTGCGAGCTGTCGTCCGGAACGGAGGCGCT 1298
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 CTCGTGCCGCCCTCGACTGTACTTTCGCACGGCCGTTTTCGTTTCGCCGCCTGTGAAACT 1285
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 GATGCTGTACACCACCCAGAAGGCTGTCGGTGCGATGTACCTGACCTCGCTGCACCAGTA 1358
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 T-TCTGCTGGAATATGTGTATGTTTTAGAACGTAAAATAAAACATTCCGCATCCGTTCGT 1344
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 CTACGTCGCGAAGGAGCTGTCGCAGGTGATCGGCGTGGCGTACGACGGCAGCCACGTGTA 1418
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 GCTGGGAACCGAGTGGATGTAGCTAGATTTAAACAAAAAAAAAAAAAAAACGGACGCGTG 1404
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 CTGGACGGACATCTCGCACAAGACGGAGTCCGATCGAGCGGTCGCTGGAGGACGGCAGCG 1478
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 GGCGG------------------------------------------------------- 1409
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 ACCGGGTGCAGCTGCTCACCGCCGGCCTGATCTCGCCCGAGGACATCGCGCTCGACTGGC 1538
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 ------------------------------------------------------------
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 TGACCGGGAACATCTACTTCAGCGACAGCGGCCAGATGGCACATTGCCGTCTGCTCGAGC 1598
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 ------------------------------------------------------------
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 GACGGCTACCACTTGCCGGGCGATCGTGCAGGACGAGCTGCACAAGCCCGCGCGGGATCG 1658
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 ------------------------------------------------------------
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 CGCTGCTGCCGCAAAACGGTACGCTGTTCTACAGCGACTGGGGCAACAACGCGATGATCG 1718
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 ------------------------------------------------------------
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 GGCGGGGCCCCGGATGGACGGTACCGAGCAGCAGGTCGTCGTCAGCGACGGCATCCACTT 1778
consensus_9337#4 ------------------------------------------------------------
consensus_9337#1 ------------------------------------------------------------
consensus_9337#2 ------------------------------------------------------------
consensus_9337#3 ------------------------------------------------------------
consensus_9337#0 GGCCGAACGGGCTGACGCTCGACTGGCCCAACC 1811
consensus_9337#4 ---------------------------------
consensus_9337#1 ---------------------------------
consensus_9337#2 ---------------------------------
consensus_9337#3 ---------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||