These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9344#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1746 fasta sequence [TTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGCGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAGCGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGTGGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGTTCATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTCGATGCGGGCGATTCGGGCACGCTACCACCCGTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGATGGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCAAAACAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACGGGTGCACCCGGCTCGAGATTGGCGTGCAGTCGGTGTACGAGGACGTGGCGCGGGACACCAACCGCGGTCACACGGTGAAGGCCACGTGCGAAAGCTTCCAGATGTCGAAGGACGCCGGCTTCAAGGTGGTTTCACACATGATGCCCGACCTGCCGAACGTGGACATCGAGCGGGATATTGAGCAGTTTATAGAGTTTTTCGAAAACCCCGACTTCCGCGCGGATGGGCTGAAAATCTATCCCACGCTGGTAATCCGCTTTTTGGGCCTTTACGAGCTGTGGAAAACGGGACGGTACAAGAGCTACCCACCGTCGACGCTGGTCGATTTGGTGGCGAAAATATTGGCCCTGGTGCCACCGTGGACCCGGGTGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCT-GGC-CCTGGCGCGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGATACGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACCGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCACGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGATGGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCAGGACACAAATAAAGTGTGGCCATTAAAAAA] [+] EMBL CNS08FPN [TTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGCGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAGCGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGTGGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGTTCATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTCGATGCGGGCGATTCGGGCACGCTACCACCCGTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGATGGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCAAAACAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACGGGTGCACCCGGCTCGAGATTGGCGTGCAGTCGGTGTACGAGGACGTGGCGCGGGACACCAACCGCGGTCACACGGTGAAGGCCACGTGCGAAAGCTTCCAGATGTCGAAGGACGCCGGCTTCAAGGTGGTTTCACACATGATGCCCGACCTGCCGAACGTGGACATCGAGCGGGATATTGAGCAGTTTATAGAGT ] [-] EMBL CNS08FPO [ AGCTTCCAGATGTCGAAGGACGCCGGCTTCAAGGTGGTTTCAAACATGATGCCCGACCTGCCGAACGTGGACATCGAGCGGGATATTGAGCAGTTTATAGAGTTTTTCGAAAACCCCGACTTCCGCGCGGATGGGCTGAAAATCTATCCCACGCTGGTAATCCGCTTTTTGGGCCTTTACGAGCTGTGGAAAACGGGACGGTACAAGAGCTACCCACCGTCGACGCTGGTCGATTTGGTGGCGAAAATATTGGCCCTGGTGCCACCGTGGACCCGGGTGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCT GGC CCTGGCGCGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGATACGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACCGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCACGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGATGGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCAGGACACAA ] [-] EMBL CNS08FR0 [ GCTTCAAGGT GTTTCACACATGATGCCCGACCTGCCGAACGTGAACATCGAGCGGGATATTGAGCAGTTTATAGAGTTTTTCGAAAACCCCGACTTCCGCGCGGATGGGCTGAAAATCTATCCCACGCTGGTAATCCGCAAAAAAGGCCTTTACGAGCTGTGGAAAACGGGACGGTACAAGAGCTACCCACCGTCGACGCTGGTCGATTTGGTGGCGAAAATATTGGCCCTGGTGCCACCGTGGACCCGGGTGTACCGTGTACAGCATGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCTGGGCGCCTGGCGCGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAACGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACCGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCACGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGATGGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCAGGACACAAATAAAGTGTGGCCATTAAAAAA] consensusID : consensus_9344#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1377 fasta sequence [CGGGTAATGCGTGTTATTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG-CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT-GGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC-GA-TGC-G-G-GCG-ATTCGGGCACGCTACCACCC-GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT-GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCT-GGCCCTGGCG-CGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAA-CGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCA-CGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGAT-GGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCA-GACACAAATAAAATGTGCTA] [+] EMBL CNS08PSM [CGGGTAATGCGTGTTATTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAGTCGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCTTCATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTCTGATTGCTG G GCG ATTCGGGCACGCTACCACCCGGTTCCTGCAGACCCGG ] [+] EMBL CNS08EPB [ TGCGTGTTATTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGA CTGGGCCCTGGCG CGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTA ] [+] EMBL BM620657 [ ccgGATTGCCGCATATTGTGCACTAAATTTACTTTAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGGATGCTGATTGTGGTAGGTGAAATCATCCAGGAGCTGCTGAAAGCGCACCACGAGGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTTGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCGGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAACCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCAT ] [+] EMBL BM593431 [ ccgGCCGCATATTGTGCACTAAATTTACTTTAAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGGATGCTGATTGTGGTAGGTGAAATCATCCAGGAGCTGCTGAAAGCGCACCACGAGGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTTGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCGGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAACCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGT ] [+] EMBL BM625835 [ ccgGCCGCATATTGTGCACTAAATTTACTTATAAAATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGGATGCTGATTGTGGTAGGTGAAATCATCCAGGAGCTGCTGAAAGCGCACCACGAAGGCAAGGACGTGAATCTGAATCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACTTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGAGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGATGGGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATACGCAACCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCG ] [+] EMBL CNS08GQ8 [ CACTAAATTTACTCAAAAAATGACGAAAAACAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGTGGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGTGGGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGCCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGA CTGGGCCCTGGCG CGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAG ] [+] EMBL CNS08FQZ [ TGAATCTGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGGTCGACATCATAG CGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCGCGAAACCGATCCGGACGGCGAGT GGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACCGCTGTCCGCACATCAACATGACGGGCAACATTTGCGTGTATTGTCCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC GCGCGCGCATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGG ] [-] EMBL CNS08EPC [ TGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTC GA TGC G G GCG ATTCGGGCACGCTACCACCC GTTCCTGCAGACCCGGCACCGGGTGGAGCAGCTGAAGCAGCTGGGCCACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATAACTGTCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCT GGCCCTGGCG CGCATGAAGGATCTCGGCACGAACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAA CGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCA CGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAGGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGAT GGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCA GACACAAATAAAA ] [-] EMBL CNS08GQ9 [ CACTCGGTCGACAAGGTGGAGTTTATTGTGAT GGGAGGGACGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCACTGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACACCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATAACTGCCTCAAGCGGCATTTGTCCGATTTGCTGTCGTACCGTGTACAGCGTGACATCCCGATGCCGCTCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCT GGCCCTGGCG CGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAA CGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCA CGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGAT GGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAAT ] [-] EMBL CNS09MRZ [ gcCGAGCT GGCCCTGGCGCCGCATGAAGGATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAA CGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCA CGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGAT GGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCA GGCAC ] [-] EMBL CNS094IQ [ GGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACAACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGTGGGAAAGCGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCA CGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGATAGGACCGTACATGTCTAAGATGTTG ] [-] EMBL CNS08PSN [ gacCCAGATCAGGTTGAGCTGATTCGGCGGGA AACGTGGCGAACGGAGGGTGGGAAA CGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGTTGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGCGGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCAGCGTGATCCGACGAAATTCCAGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGCACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGATTGGGTACGAGCTCGAT GGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAATAAATTCAGGACACAAATAAAGTGTGCTA] consensusID : consensus_9344#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 399 fasta sequence [AATCCCCAGGTTAATGTGTGTTGCGTTATTTCAACACACCGCTGTCCTGCGACATCTAACATGTACGGGCGAACATTTGCGTGTATTTGTCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGAACTCGATGCGGGCGATTCGGTGCGACGCTACACCCGTTCCTGCAGACCCGGCACCGNNGTTGAGCAGCTTGAAGCAGCTGGTGCNCACTCNNGTCGACAAAGTGGAGTTTATCTGTGATTGGGANGGGACGGTTCACTNTTTTCTTGCCCNGGAANGGAGGTAATCCACCGANANCTTCNCAATATACGGAAACCTTNTTGATCGAAAGCCAACCTGTTCCGGGGCCGATAACAANACGTCCAATTGTT] [+] EMBL AL933557 [AATCCCCAGGTTAATGTGTGTTGCGTTATTTCAACACACCGCTGTCCTGCGACATCTAACATGTACGGGCGAACATTTGCGTGTATTTGTCCGGCGGTCCGGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGAACTCGATGCGGGCGATTCGGTGCGACGCTACACCCGTTCCTGCAGACCCGGCACCGNNGTTGAGCAGCTTGAAGCAGCTGGTGCNCACTCNNGTCGACAAAGTGGAGTTTATCTGTGATTGGGANGGGACGGTTCACTNTTTTCTTGCCCNGGAANGGAGGTAATCCACCGANANCTTCNCAATATACGGAAACCTTNTTGATCGAAAGCCAACCTGTTCCGGGGCCGATAACAANACGTCCAATTGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9344#0 ----------------TTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAA 44 consensus_9344#1 CGGGTAATGCGTGTTATTTTCGGCTGATTGCCGCATATTGTGCACTAAATTTACTCAAAA 60 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 AATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGT 104 consensus_9344#1 AATGACGAAAAAGAAGCCTTTGGGAGTTGGGTTGAGCCGAGATGAGCGAATGCTGATCGT 120 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 GCGTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATC 164 consensus_9344#1 G-GTGGGTGAAATCATCCAGGAGCTTCTGAAAGCACACCACGAAGGCAAGGACGTGAATC 179 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 TGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGG 224 consensus_9344#1 TGAACCGGCTGAAAACGCGCATCTCTTCCAACTATGGGTTAGAGTCGGCACCGCGGCTGG 239 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 TCGACATCATAGCGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCG 284 consensus_9344#1 TCGACATCATAGCGGCCGTTCCGCACGAGGCCAAATCCATTCTTTTGCCGAAGCTACGCG 299 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 CGAAACCGATCCGGACGGCGAGTGGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACC 344 consensus_9344#1 CGAAACCGATCCGGACGGCGAGTGGTATTGCAGTGGTTGCCGTTATGTGCAAACCACACC 359 consensus_9344#2 -------------------AATCCCCAGGTTAATGTGTGTTGCGTTATTTCAAC-ACACC 40 * * * ** ** * * * *** ***** consensus_9344#0 GCTGTCC-GC-ACATC-AACATG-ACGGGTT--CATTTGCGTGTATTGTCCCGGCGGTCC 398 consensus_9344#1 GCTGTCC-GC-ACATC-AACATG-ACGGGCAA-CATTTGCGTGTATTGTCCCGGCGGTCC 414 consensus_9344#2 GCTGTCCTGCGACATCTAACATGTACGGGCGAACATTTGCGTGTATTTGTCCGGCGGTCC 100 ******* ** ***** ****** ***** ************** ********** consensus_9344#0 GGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTCGATGCG 458 consensus_9344#1 GGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGACCTCGATGCG 474 consensus_9344#2 GGACAGTGATTTCGAGTACTCGACGCAAAGCTACACCGGGTACGAACCGAACTCGATGCG 160 ************************************************** ********* consensus_9344#0 GGCGATTCGG-GC-ACGCTACCACCCGTTCCTGCAGACCCGGCACCGGG-TGGAGCAGCT 515 consensus_9344#1 GGCGATTCGG-GC-ACGCTACCACCCGTTCCTGCAGACCCGGCACCGGG-TGGAGCAGCT 531 consensus_9344#2 GGCGATTCGGTGCGACGCTAC-ACCCGTTCCTGCAGACCCGGCACCGNNGTTGAGCAGCT 219 ********** ** ******* ************************* * ******** consensus_9344#0 -GAAGCAGCTGGGCCAC---TCGGTCGACAAGGTGGAGTTTAT-TGTGAT--GGGAGGGA 568 consensus_9344#1 -GAAGCAGCTGGGCCAC---TCGGTCGACAAGGTGGAGTTTAT-TGTGAT--GGGAGGGA 584 consensus_9344#2 TGAAGCAGCTGGTGCNCACTCNNGTCGACAAAGTGGAGTTTATCTGTGATTGGGANGGGA 279 *********** * * ******** *********** ****** ** **** consensus_9344#0 CGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCAC 628 consensus_9344#1 CGTTCATGTGCCTGCCGGAGGACTATCGCGATTTCTTCATTCGCAATCTGCACGACGCAC 644 consensus_9344#2 CGGTTCACTNTTTTCTTGCCCNGGAANGGAGGTAATCCAC-CGANANCTTCNCAATATAC 338 ** * * * * * * * * * ** ** * ** * * * ** consensus_9344#0 TGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCAAA 688 consensus_9344#1 TGTCCGGCCATACCAGCTCGAGTGTGGCGGAAGCGGTCAAGTATTCGGAAAAATCGCACA 704 consensus_9344#2 GG-------AAACCTTNTTGATCGAAAGCCAACCTGTTCCGGGGCCGATAACAANACGT- 390 * * *** * ** * ** * ** * ** ** * * consensus_9344#0 ACAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGT 748 consensus_9344#1 CCAAGTGCATTGGCATCACGATCGAAACGCGACCGGATTACTGTCTCAAGCGGCATTTGT 764 consensus_9344#2 CCAATTGTT--------------------------------------------------- 399 *** ** consensus_9344#0 CCGATTTGCTGTCGTACGGGTGCACCCGGCTCGAGATTGGCGTGCAGTCGGTGTACGAGG 808 consensus_9344#1 CCGATTTGCTGTCGTAC------------------------------------------- 781 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 ACGTGGCGCGGGACACCAACCGCGGTCACACGGTGAAGGCCACGTGCGAAAGCTTCCAGA 868 consensus_9344#1 ------------------------------------------------------------ consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 TGTCGAAGGACGCCGGCTTCAAGGTGGTTTCACACATGATGCCCGACCTGCCGAACGTGG 928 consensus_9344#1 ------------------------------------------------------------ consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 ACATCGAGCGGGATATTGAGCAGTTTATAGAGTTTTTCGAAAACCCCGACTTCCGCGCGG 988 consensus_9344#1 ------------------------------------------------------------ consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 ATGGGCTGAAAATCTATCCCACGCTGGTAATCCGCTTTTTGGGCCTTTACGAGCTGTGGA 1048 consensus_9344#1 ------------------------------------------------------------ consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 AAACGGGACGGTACAAGAGCTACCCACCGTCGACGCTGGTCGATTTGGTGGCGAAAATAT 1108 consensus_9344#1 ------------------------------------------------------------ consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 TGGCCCTGGTGCCACCGTGGACCCGGGTGTACCGTGTACAGCGTGACATCCCGATGCCGC 1168 consensus_9344#1 --------------------------------CGTGTACAGCGTGACATCCCGATGCCGC 809 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 TCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCTGGCCCTGGCGCGCATGAAGG 1228 consensus_9344#1 TCGTTACGTCGGGCGTTGAGCATGGGAATTTGCGCGAGCTGGCCCTGGCGCGCATGAAGG 869 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 ATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACA 1288 consensus_9344#1 ATCTCGGCACGGACTGTCGTGACGTGAGGACGCGCGAGGTTGGCATCCAGGAAATTCACA 929 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 ACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGT 1348 consensus_9344#1 ACAAGGTCCGACCAGATCAGGTTGAGCTGATTCGGCGGGACTACGTGGCGAACGGAGGGT 989 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 GGGATACGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACCGTTGCGGT 1408 consensus_9344#1 GGGAAACGTTCCTATCGTACGAAGACCCGAAGCAGGACATTCTGGTGGGACTGTTGCGGT 1049 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 TGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGC 1468 consensus_9344#1 TGCGCAAATGCTCACCGGACACGTTCCGCCCGGAGCTGGTCGATAGCTGTTCGATTGTGC 1109 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 GGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCACGTGATCCGACGAAATTCC 1528 consensus_9344#1 GGGAGCTGCACGTTTATGGGTCGGTGGTGCCGGTGAATGCACGTGATCCGACGAAATTCC 1169 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 AGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGC 1588 consensus_9344#1 AGCATCAAGGGTTCGGCATGCTGCTGATGGAGGAAGCGGAACGTATCGCGCGGGAAGAGC 1229 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 ACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGA 1648 consensus_9344#1 ACGGCAGTAAGAAGCTGGCGGTTATATCGGGCGTTGGAACGAGGAATTACTATCGCAAGA 1289 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 TTGGGTACGAGCTCGATGGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAA 1708 consensus_9344#1 TTGGGTACGAGCTCGATGGACCGTACATGTCTAAGATGTTGTAAGACAACATTTCCGAAA 1349 consensus_9344#2 ------------------------------------------------------------ consensus_9344#0 TAAATTCAGGACACAAATAAAGTGTGGCCATTAAAAAA 1746 consensus_9344#1 TAAATTCAG-ACACAAATAAAATGTG-CTA-------- 1377 consensus_9344#2 -------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||