These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9347#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1579 fasta sequence [TTTTTTTTTAAAGTTGTAACACATGGGTCGCTTTATTTCAAACGGCACTTGCACACACAATGTGGTATAATACTTAGGTATAAAGAATGTACAAAATCATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTTCTCGCGTTCGCGTTGCTGTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCACCCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCTGCATCCAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGGTACGTACGGTAA-G-TCTGCTAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAACGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC-AGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTA-TC-GCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGC-GTGTGTTAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAATAATATCGCGACACTTTTCAAGCTAGCTCTATGCCACCGGGATTGAAGCGAAGAAAACTGGGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACAGCTAGCAAAATGCACGCCTCTGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATTGGATGACGGTTCGATTACACCACTTCCCACGGCCGGCTGGCTGGCTGGCTGGCTGGCTGGCAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCCAGCAGCGTGGTGCCGGACGCGTGGGCGGACGCGTGGGCGG] [+] EMBL CNS08QB3 [TTTTTTTTTAAAGTTGTAACACATGGGTCGCTTTATTTCAAACGGCACTTGCACACACAATGTGGTATAATACTTAGGTATAAAGAATGTACAAAATCATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTTCTCGCGTTCGCGTTGCTGTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCACCCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCT CATCCAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGGTACGTACGGTAA G TCTGCTAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATAAATTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAACGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC ] [+] EMBL CNS08UTC [ TTATTTCACACGGCACTCGCACACACAATGTGGTATAATACTTAGGTATAAAGAATGTACAAAAT ATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTTCTCGCGTTCGCGTTGCTGTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCACCCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCTGCATATAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGGTACGTACGGTAA G TCTGCTAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAACGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGC ] [-] EMBL CNS08QB2 [ TCGATG TTGCGC TTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCACCCAACCCATTATGGATTACAATTGCGGGGGAGCGACGCTGCATCCAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGTTTTTTACGGTAA GTTCTG TAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAACGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC AGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATTC GCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGC GTTTTTTAATccagta ] [-] EMBL BX601922 [ GATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCACCCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCTGCATCCAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGGTACGTACGGTAA G TCTGCTAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAA ] [-] EMBL CNS08UTB [ TGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGACACACACAACACTGGTATGTATCGTCTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATG TCCACCCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCTGCATCCAGAGCCAGTAGGCTGTAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAGGGACGACAGGTACGTACGGTAAGG TCTG TAACGCACACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTATTACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAACGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC AGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTACTC GCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGT ] [-] EMBL AGA284721 [ AGGTACGAACGGTAA G TCTGCTAACG CACACACACATTGTGACAGATCGACATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGTTGGGCACAATTCAATCCTGACCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTGTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGCCGTTTGGTGGCGTGTGGTGGGTTTCCCCTATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAAAATTGACCGAAATCCAATAGGAGAAGAAGCTACCCGAGTCTGATCATATTCCAACAGTAATCGAAGAAGTCCTACTCCTAGCTACCATCTAATCACTATCCTCTCTCTCCTTTTGTGTAGGACTTGGGGATTTGATGCCCTGCTTGGTTCTATCTGTGGCCCTTTCGCCTTTCCCGGGAGGAACCATTGCGG ] [-] EMBL BM645275 [ TTTGACGGGCACAATGCAATCCCGTTCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTGTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCCCCTATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACGGAAATCCGATAGGAAAAGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTACCATCTAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGCGGACTTGGTGCCCTGCTTGGTTCTATCTGTGGCCCTTTCGCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC AGACACACGCTCACTACGAACAATACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTA TCGGCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTTAATAATGTAGCAGcgg ] [-] EMBL AL692675 [ tgaCCCAAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTGTTCTCACTAGAATAAATAAGCAGTCTCTGAGAAGTGCCGTTTGGTGGCGTGT GTGGGTTTCCCCTATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAAAATTGACCGAAATCCAATAGGAGAAGAAGCTACCCGAGTCTGATCATATTCCAACAGTAATCGAAGAAGTCCTACTCCTAGCTACCATCTAATCACTATCCTCTCTCTCCTTTTGTGTAGGACTTGGGGATTTGATGCCCTGCTTGGTTCTATCTGTGGCCCTTTCGCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGCAAGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTA TCGGCGCAGCCTTTTCGAGCCTTaacctc ] [-] EMBL BX622891 [ TTCCCCTATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAAAATTGACCGAAATCCAATAGGAGAAGAAGCTACCCGAGTCTGATCATATTCCAACAGTAATCGAAGAAGTCCTACTCCTAGCTACCATCTAATCACTATCCTCTCTCTCCTTTTGTGTAGGACTTGGGGATTTGATGCCCTGCTTGGTTCTATCTGTGGCCCTTTCGCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC AGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTA TCGGCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTAAATAATGTAGCAGAAGGTGAGAC ] [-] EMBL BM600938 [ CAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGC AGACACACGCTCACTACGAACAATACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTA TCGGAGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTTAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAATAATATCGCGACACTTTTCAAGCTAGCTCTATGCCACCGGGATTGAAGCGAAGAAAACTGGGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACAGCTAGCAAAATGCACGCCTCTGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATTGGATGACGGTTCGATTACACCACTTCCCACGGCCGGCTGGCTGGCTGGCTGGCTGGCTGGCAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCCAGCAGCGTGGTGCCGGACGCGTGGGCGGACGCGTGGGCGG] consensusID : consensus_9347#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 854 fasta sequence [ATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGNAGACACACGCTCACTACGANCAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTAAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAAGAATATCGCGACACTTTTCAAGCTAGCTCTATGCCGCCGGGATTGAAGCGAAGAAAACTGAGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACTTCGAAACACACAGAACGGCACGAAGAAAGGGACTATTATTGAGCCGCTATTAAGCTTCTTCTTCTTCGCCGAGGATGAGCCAATGCAAGCCCGGATAGGAATGCGTTCTTCTCAACAGACTCAACGATTATAGTGCTGCGATCGACACATAAACACACACACACCGAAGGCAACAAACGCCTCAAACACGCACTCTCTTATCTACGCACTGAAATCGTTTCTA-TTTTTTGTTGTAATAAATGGACGCTACAGCTAGCAAAATGCACGCCTCTGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATTGGATGACGGTTCGATTACACCACTTCCCAAGGCCGGCTGGCTGGCTGGCTGGCTGGCAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCGAGCAGCG] [-] EMBL BX622004 [ATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGNAGACACACGCTCACTACGANCAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTAAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAAGAATATCGCGACACTTTTCAAGCTAGCTCTATGCCGCCGGGATTGAAGCGAAGAAAACTGAGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACTTCGAAACACACAGAACGGCACGAAGAAAGGGACTATTATTGAGCCGCTATTAAGCTTCTTCTTCTTCGCCGAGGATGAGCCAATGCAAGCCCGGATAGGAATGCGTTCTTCTCAACAGACTCAACGATTATAGTGCTGCGATCGACACATAAACACACACACACCGAAGGCAACAAACGCCTCAAACACGCACTCTCTTATCTACGCACTGAAATCGTTTCTA TTTTTTGTTGTAATAAATGGACGCTACAGCTAGCAAAATGCACGCCTCTGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATTGGATGACGGTTCGATTACACCACTTCCCAAGGCCGGCTGGCTGGCTGGCTGGCTGGCAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCGAGCAGCG] [-] EMBL BX626196 [ AGCCTGTGTGNCCGGGTGCGGNGTGTAAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAAGAATATCGCGACACTTTTCAAGCTAGCTCTATGCCGCCGGGATTGAAGCGAAGAAAACTGAGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACTTCGAAACACACAGAACGGCACGAAGAAAGGGACTATTATTGAGCCGCTATTAAGCTTCTTCTTCTTCGCCGAGGATGAGCCAATGCAAGCCCGGATAGGAATGCGTTCTTCTCAACAGACTCAACGATTATAGTGCTGCGATCGACACATAAACACACACACACCGAAGGCAACAAACGCCTCAAACACGCACTCTCTTATCTACGCACTGAAATCGTTTCTATTTTTTTGTTGTAATAAATGGACGCTACAGCTAGCAAAATGCACGCCTCTGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATTGGATGACGGTTCGATTACACCACTTCCCACGGCCGGCTGGCTGGCTGGCTGGCTGGCAGGGGGACTGGGTAGCGCGTT ] consensusID : consensus_9347#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 514 fasta sequence [GCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCTTAATGAGCAGTAAGGGCAGTTCCGGCAGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTTTGATTCTGAGCTTGTGTGGCCGGGTGCGGTGTGTAAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAATAATATCGCGACACTTTTCAAGCTAGCTCTATGCCGCCGGGATTGAAGCGAAGAAAACTGGGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACCTAGAGGCAGAAATGGGAAGAGAAAACAGAAGAACAAAATGATTAGTAAGGAAAGTACTTGAAAAGGATAGCACTTGAC] [-] EMBL BX602924 [GCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATGCAGGCGCTTAATGAGCAGTAAGGGCAGTTCCGGCAGACACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTTTGATTCTGAGCTTGTGTGGCCGGGTGCGGTGTGTAAATAATGTAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAATAATATCGCGACACTTTTCAAGCTAGCTCTATGCCGCCGGGATTGAAGCGAAGAAAACTGGGACAGGATATGAAGTAGAATTTTAATCACTCTCCCCTTGTAGAACTAGGAACGCCACCTAGAGGCAGAAATGGGAAGAGAAAACAGAAGAACAAAATGATTAGTAAGGAAAGTACTTGAAAAGGATAGCACTTGAC] consensusID : consensus_9347#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 363 fasta sequence [TTTTTTTTAAAAGTTGTATAAAATGGTCGCTTTATTTAAAACGGCACTTGCACACACAATG-TGGTATAATACTTAGGTATAAAGAATGTACAAAATATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTACTCGCGTTCGCGTTGC-T-GTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGAGACACACACAACACTGGTTATCCTGCATCCTCCTGCAATCAAAGCACCGGGATATGTTCTAACCAACCCATTGCGGATTACAATTGCGGG] [+] EMBL AGA283427 [TTTTTTTTAAAAGTTGTATAAAATGGTCGCTTTATTTAAAACGGCACTTGCACACACAATG TGGTATAATACTTAGGTATAAAGAATGTACAAAATATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTACTCGCGTTCGCGTTGC T GTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTGCTTGCACGGTGATGCCGAGAGCGCACAGGGGAGACACACACAACACTGGTTATCCTGCATCCTCCTGCAATCAAAGCACCGGGATATGTTCTAACCAACCCATTGCGGATTACAATTGCGGG] [+] EMBL CNS09E25 [ CGGCACATGCACACACAATGATGGTATAATACTTAGGTATAAAGAATGTACAAAATATGGTGTCAAAATATCATCATCGTTCGTTTGTATAGTCAAAAATTTTCAGATTCTTCCCTTCTCGTTTAAGGCACTTCTTCTACTCGCGTTCGCGTTGCATAGTCGATGTTTGCGCTTTCTAATGTAAAAATTAATCAGACAATGTGCTTG ] consensusID : consensus_9347#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 90 fasta sequence [GTTTGCTGCTCGTCTTCAGTCCGGTCCTTTTTGTTTTTTGCGTGTGTCTGCCGGAGCTGCCCTTACTGCTCATTAGGCGCCTGCCTTACA] [+] EMBL CNS09E24 [GTTTGCTGCTCGTCTTCAGTCCGGTCCTTTTTGTTTTTTGCGTGTGTCTGCCGGAGCTGCCCTTACTGCTCATTAGGCGCCTGCCTTACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9347#0 -----------------------------------------------------TTTTTTT 7 consensus_9347#3 -----------------------------------------------------TTTTTTT 7 consensus_9347#1 -------------------ATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATG 41 consensus_9347#2 GCCTTTCCCGGGAGGAACCATTGCGGTCGCCAATCAAACGGAATCGAACGGGATGTAATG 60 consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TTAAAGTTGTAACACATGGGTCGCTTTATTTCAAACGGCACTTGCACACACAATGTGGTA 67 consensus_9347#3 TAAAAGTTGTATAAAATGG-TCGCTTTATTTAAAACGGCACTTGCACACACAATGTGGTA 66 consensus_9347#1 CAGGCGCC-TAATGAGCAGTAAGGGCAGCTCCGGNAGACACACGCTCACTACGANCAGGA 100 consensus_9347#2 CAGGCGCT-TAATGAGCAGTAAGGGCAGTTCCGGCAGACACACGCTCACTACGAACAGGA 119 consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TAATACTTAGGTATAAAGAATGTACAAAATCATGGTGTCAAAATATCATCATCGTTCGTT 127 consensus_9347#3 TAATACTTAGGTATAAAGAATGTACAAAAT-ATGGTGTCAAAATATCATCATCGTTCGTT 125 consensus_9347#1 CCGGGCTGAAG-ACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCA 159 consensus_9347#2 CCGGGCTGAAG-ACGAGCAGCAAACCGGCCCAGATTGCGACCATCCAGGCCGTGTTGGCA 178 consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCA-CTTCTTCTT---CT 183 consensus_9347#3 TGTATAGTCAAAAGTTTTCAGATTCTTCCCTTCTCGTTTAAGGCA-CTTCTTCTA---CT 181 consensus_9347#1 CCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTT 219 consensus_9347#2 CCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCGGCGCAGCCTTTTCGAGCCTT 238 consensus_9347#4 ----------------------GTTTGCTGCTCGTCTTCAGTCCGGTCCTTTTTGTTTTT 38 * * ** * * ** * consensus_9347#0 CGCGTTCGCGTTGCTGTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTG 243 consensus_9347#3 CGCGTTCGCGTTGCTGTCGATGTTTGCGCTTTCTAATGTAGAAATTAATCAGACAATGTG 241 consensus_9347#1 TGATCCTGAGCCTGTGTGGCCGGGTGCGGTGTGTAA----ATAATGTAGCAGAAGGTGAG 275 consensus_9347#2 TGATTCTGAGCTTGTGTGGCCGGGTGCGGTGTGTAA----ATAATGTAGCAGAAGGTGAG 294 consensus_9347#4 TGCGTGTGT-CTGCCGGAGCTGCCCTTACTGCTCAT--TAGGCGCCTGCCTTACA----- 90 * * * * * * * * * consensus_9347#0 -CTTGCACGGTGATGCCGAGAGCGCACAGGGGA--CACACACAACACTGGTATGTATCGT 300 consensus_9347#3 -CTTGCACGGTGATGCCGAGAGCGCACAGGGGAGACACACACAACACTGGT------TAT 294 consensus_9347#1 ACGTACGTTGGAAAGGTTAATAAGAATATCGCG-ACACTTTTCAAGCTAGCTCTATGCCG 334 consensus_9347#2 ACGTACGTTGGAAAGGTTAATAATAATATCGCG-ACACTTTTCAAGCTAGCTCTATGCCG 353 consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 CTTACGTGCGACAGAATGTAATTCTTCCTCCTGCAATCAAAGCACCGGGATATGTTCCAC 360 consensus_9347#3 CCTGCAT-------------------CCTCCTGCAATCAAAGCACCGGGATATGTTCTAA 335 consensus_9347#1 CCGGGATTGAAGCGAAGAAA------ACTGAGACAGGATATGAAGTAGAATTTTAATCAC 388 consensus_9347#2 CCGGGATTGAAGCGAAGAAA------ACTGGGACAGGATATGAAGTAGAATTTTAATCAC 407 consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 CCAACCCATTATGGATTACAATTGCGGGGCAGCGACGCTGCATCCAGAGCCAGTAGGCTG 420 consensus_9347#3 CCAACCCATTGCGGATTACAATTGCGGG-------------------------------- 363 consensus_9347#1 TCTCCCCTTGTAGAACTAGGAACGCCACTTCGAAACACACAGAACGGCACGAAGAAAGGG 448 consensus_9347#2 TCTCCCCTTGTAGAACTAGGAACGCCACCTAGAGGCAGA---AATGGGAAGAGAAAACAG 464 consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TAGTAGTGGCGCTCCGTTGCTCCATCACGTTTAATTAGGCTAATGGCCTCCGGGGAGAAG 480 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ACTATTATTGAGCCGCTATTAAGCTTCTTCTTCTTCGCCGAGGATGAGCCAATGCAAGCC 508 consensus_9347#2 A--AGAACAAAATGATTAGTAAGGAAAGTACT---TGAAAAGGATAGCACTTGAC----- 514 consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 GGACGACAGGTACGTACGGTAAGTCTGCTAACGCACACACACACATTGTGACAGATCGAC 540 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 CGGATAGGAATGCGTTCTTCTCAACAGACTCAACGATTATAGTGCTGCGATCGACACATA 568 consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 ATTTTTTCGCGTGTGTGTGCCTATCTATCTTATTTGACGGGCACAATGCAATCCCGTCCC 600 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 AACACACACACACCGAAGGCAACAAACGCCTCAAACACGCACTCTCTTATCTACGCACTG 628 consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 AAAATCTTGCCTCACACTCTATGCGATAAATTAATTTAGCCTTTCTTTTGTCTCGTTTTC 660 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 AAATCGTTTCTATTTTTTGTTGTAATAAATGGACGCTACAGCTAGCAAAATGCACGCCTC 688 consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TCACTAGAATAAATAAGCAGTCTCTGAGAAGTGGCGGTTGTTGGCGTATGGTGGGTTTCC 720 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 TGCTTCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCG 748 consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 CCAATTCGTTTCCTAGTAGCGGGCAGAGGGCACCAACATTGACCGAAATCCGATAGGAAA 780 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 TATTGGATGACGGTTCGATTACACCACTTCCCAAGGCCGGCTGGCTGGCTGGCTGGCTGG 808 consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 AGAAGCTACCAGAGCCTGATCGTATTCCGACAGAAATCGAAGAAGTCCTACTCCTAGCTA 840 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 CAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCGAGCAGCG-------------- 854 consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 CCATATAATCACTATCCTCCCTCTCCTTTTGTGTAGGACTTGGGAACTTGGTGCCCTGCT 900 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TGGTTCTATCTGTGGCCTTTTCGCCTTTCCCGGGAGGAACCATTGTGGTCGCCAATCAAA 960 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 CGGAATCGAACGGAATGTAATGCAGGCGCCTAATGAGCAGTAAGGGCAGCTCCGGCAGAC 1020 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 ACACGCTCACTACGAACAGGACCGGGCTGAAGACGAGCAGCAAACCGGCCCAGATTGCGA 1080 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 CCATCCAGGCCGTGTTGGCACCTAGCAGCGACAGTGTCATTATTATCTCGCTCTCTATCG 1140 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 CGCAGCCTTTTCGAGCCTTTGATCCTGAGCCTGTGTGGCCGGGTGCGTGTGTTAATAATG 1200 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TAGCAGAAGGTGAGACGTACGTTGGAAAGGTTAATAATAATATCGCGACACTTTTCAAGC 1260 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TAGCTCTATGCCACCGGGATTGAAGCGAAGAAAACTGGGACAGGATATGAAGTAGAATTT 1320 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TAATCACTCTCCCCTTGTAGAACTAGGAACGCCACAGCTAGCAAAATGCACGCCTCTGCT 1380 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TCGGTTACGCTAGACGAGACAAGGCTCGGCCTGTGACATAAAACTGCAACCGCGCGTATT 1440 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 GGATGACGGTTCGATTACACCACTTCCCACGGCCGGCTGGCTGGCTGGCTGGCTGGCTGG 1500 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 CAGGGGGACTGGGTAGCGCGTTTGTGTGTACGGTGCTCCAGCAGCGTGGTGCCGGACGCG 1560 consensus_9347#3 ------------------------------------------------------------ consensus_9347#1 ------------------------------------------------------------ consensus_9347#2 ------------------------------------------------------------ consensus_9347#4 ------------------------------------------------------------ consensus_9347#0 TGGGCGGACGCGTGGGCGG 1579 consensus_9347#3 ------------------- consensus_9347#1 ------------------- consensus_9347#2 ------------------- consensus_9347#4 ------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||