These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9353#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1692 fasta sequence [AAGGGTTTTATTTTAAGTCCTCGATCCACACCGTGCGGTGGCGGTTGTAGCAGCATTTCGTGCGTTC--GTGTGTGTGTGTAGTGTGTGTAGTGTGTAAAGTTCGTTCACCACAAACATGCTGCTGTCCAGGAAAATCGTACCGCGAACGTTAGCAGGCATCGCCAGCCGCGCTTACTCCGCCGAC-GTCAATAGAAACTACGACATTGTGGTAGTTGGCGGTGGTATCGTCGGTACGGCCTCAGCACGCGAGATTTTGCTACGCCACCCGGCCCTGCGGATTGCGATCGTG-GAGAAGGAGCCCAAGCTGGCCTTCCATCAGAGTGGCCACAACAGTGGGGTCATCCACGCGGGCATTTACTACAAGCCGGGCTCGCTCAAGGCAAAACTGTGCGTCGAGGGACTGCACTTAAGCTACAAGTATTTGGACGAGAAGAGCATTCCCTACAAGAAGGTTGGCAAGCTGATCGTGGCCACCAATCCGGTGGAAGTGGAACGATTAAACGACTTGTATCAACGGTCGCTGGCCAACAACGTACCGGATGTGCAGGTAGTGGATCAGGCCAAAATCAAAGAGATCGAA-CCGTACTG-CCA-GGGGCTG-AAAGCGATCTGGTCGCCCCATACGGGCATC-GTCGACTGGGGCCTGGTGACGCAGTACTACGGGCGCGATTTCAAGGCCGCCGGGGGCGATGTGTACATCAACTTTAAGGTGGCCAAGTTCAGCGAAGCAC-C-GGACAACCTCGACTACCCGATCGTGGTGCGCAGCGAG-AAGGGCGATGAGATACGGGCCCGCCACATACTGACCTGCGGTGGGCTGCAGTCGGACAAGATCGCGGAGATGACGGGCTG-CTCGGCGGTGCCGAAAATTGTCCCC-TTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTACCCCGTGCCCGACCCGCGGTTCCCCTTCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAGCGTGTGGTTGGGCCCGAACGCGGTGCTGGCGTTCCGCCGCGAGGGCTACAAGTGGTCCGACATCAACGTGCCGGAGCTGATCGATGCGCTGCGCTTCCCGGGATTCATCAAGATGGCTTCCAAGTTCGTCGGTGCGGGCATGATGGAGATTGCCCGGTCCGCGCTGATTCCGCTGCAGGTGCGCGAGCTGCAAAAGTTCATCCCCGACATCCACGAGTACGATGTGGCGCGTGGCCCGGCCGGCGTCCGGGCGCAGGCACTCGACAACGACGGCAACCTGGTGGACGATTT-CGTGTTCGATCACGGGACGGGCGAGTCGGTGCTGTCGAAAAACATTCTGCACTGCCGCAATGCTCCCTCGCCCGGGGCTACGAGTTCGCTGTCGATCGCTAAAATGATTGCCGACAAGATCGAGCA-CGAGTTCCATATCGGAAAGTGAGTGAAGCACGCGCTTGAACGACGGTTGTTACTATTATGCGGGGGCCCTATTGCGGGGTGGAATCATATTCCACCGAAAGCCCACCCTTTCGTTGCAATTTATTTTTACGAAACTTGTTAGAGTGTACATTATTTTCTCTTGTTTAACGGTTATCGACACGCTGGTTCGTTGCATTTTACCTCGTCCCTTACAAAAGTAAGCAACAGCAAACAGACGAAA-ACAAAAAGTTAAAGCGAATAAAAAAAAAGAACGCAGGC] [+] EMBL BX601791 [AAGGGTTTTATTTTAAGTCCTCGATCCACACCGTGCGGTGGCGGTTGTAGCAGCATTTCGTGCGTTCGTGTGTGTGTGTGTAGTGTGTGTAGTGTGTAAAGTTCGTTCACCACAAACATGCTGCTGTCCAGGAAAATCGTACCGCGAACGTTAGCAGGCATCGCCAGCCGCGCTTACTCCGCCGAC GTCAATAGAAACTACGACATTGTGGTAGTTGGCGGTGGTATCGTCGGTACGGCCTCAGCACGCGAGATTTTGCTACGCCACCCGGCCCTGCGGATTGCGATCGTG GAGAAGGAGCCCAAGCTGGCCTTCCATCAGAGTGGCCACAACAGTGGGGTCATCCACGCGGGCATTTACTACAAGCCGGGCTCGCTCAAGGCAAAACTGTGCGTCGAGGGACTGCACTTAAGCTACAAGTATTTGGACGAGAAGAGCATTCCCTACAAGAAGGTTGGCAAGCTGATCGTGGCCACCAATCCGGTGGAAGTGGAACGATTA ] [+] EMBL BX624103 [ AGGGTTTTATTTTAAGTCCTCGATCCACACCGTGCGGTGGCGGTTGTAGCAGCATTTCGTGCGTTCGTGTGTGTGTGTGTAGTGTGTGTAGTGTGTAAAGTTCGTTCACCACAAACATGCTGCTGTCCAGGAAAATCGTACCGCGAACGTTAGCAGGCATCGCCAGCCGCGCTTACTCCGCCGAC GTCAATAGAAACTACGACATTGTGGTAGTTGGCGGTGGTATCGTCGGTACGGCCTCAGCACGCGAGATTTTGCTACGCCACCCGGCCCTGCGGATTGCGATCGTG GAGAAGGAGCCCAAGCTGGCCTTCCATCAGAGTGGCCACAACAGTGGGGTCATCCACGCGGGCATTTACTACAAGCCGGGCTCGCTCAAGGCAAAACTGTGCGTCGAGGGACTGCACTTAAGCTACAAGTATTTGGACGAGAAGAGCATTCCCTACAAGAAGGTTGGCAAGCTGATCGTGGCCACCAATCCGGTGGAAGTGGAACGATTAAACGACTTGTATCAACGGTCGCTGGCCAACAACGTACCGGATGTGCAGGTAGTGGATCAGGCCAAAATCAAAGAGATCGAA CCGTACTG CCA GGGGCTG AAAGCGATCTGGTCGCCCCATACGGGCATC GTCGACTGGGGCCTGGTGACGCAGTACTACGGGCGCGATTTCAAGGGCGCCGGGGGCGATGTGTACATCAACTTTAAGGTGGCCAAGTTCAGCGAAGCAC C GGACAACCTCGACTACCCGAT ] [+] EMBL CNS08FQ3 [ CGTGCGGTGGCGGTTGTAGCATCATTTCGTGCGTTC GTGTGTGTGTGTA GTGTGTAGTGTACAAAGTTCGTTCACCACAAACATGCTGCTGTCCAGGAAAATCGTACCGCGAACGTTAGCGGGCATCGCCAGCCGCGCTTACTCCGCCGACTGT AATAGAAACTACGACATTGTGGTAGTTGGCGGTGGTATCGTCGGTACGGCCTCGGCACGCGAGATTTTGCTACGCCACCCGGCCCTGCGGATTGCGATCGTGCGAGAAGGAGCCCAAGCTGGCCTTCCACCAGAGTGGCCACAACAGTGGGGTCATCCACGCGGGCATCTACTACAAGCCGGGCTCGCTCAAGGCGAAACTGTGCGTCGAGGGACTGCACTTAAGCTACAAGTATTTGGACGAGAAGAGCATTCCCTACAAGAAGGTTGGCAAGCTGATCGTGGCCACCAATCCGGTCGAAGTGGAAC ATTAAACGACTTGTATCAACGATCGCTGGCCAACAACGTGCCGGATGTGCAGGTAGTGGATCAGGCCAAAATCAAAGAGATCGAA CCGTACTG CCA GGGGCTG AAAGCGATCTGGTCGCCCCATACGGGCATC GTCGACTGGGGCCTGGTGACGCA TACTACGGGCGCGATTTCAAGGCCGCCGGGGGCGATGTGTACATCAACTTTAAGGTGGCCAAGTTCAGCGAA CACGCGGGACAACCTCGACTACCCGATCGTGGTGCGCA CGAGAAAGGGCGATGAGATACGGGCCCGCCACATACTGACCTGCGGCGGGCTGCAGTCGGACAAGATCGCGGAGATGACGGGCTG CTCGGCGGTGCGAAAAATTGTCCCC TTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTATCCCGTGCCCGACCCGCGGTTCCCCTTCC ] [+] EMBL BX624700 [ GTGTGTGTGTGTAGTGTGTGTAGTGTGTAAAGTTCGTTCACCACAAACATGCTGCTGTCCAGGAAAATCGTACCGCGAACGTTAGCAGGCATCGCCAGCCGCGCTTACTCCGCCGAC GTCAATAGAAACTACGACATTGTGGTAGTTGGCGGTGGTATCGTCGGTACGGCCTCAGCACGCGAGATTTTGCTACGCCACCCGGCCCTGCGGATTGCGATCGTG GAGAAGGAGCCCAAGCTGGCCTTCCATCAGAGTGGCCACAACAGTGGGGTCATCCACGCGGGCATTTACTACAAGCCGGGCTCGCTCAAGGCAAAACTGTGCGTCGAGGGACTGCACTTAAGCTACAAGTATTTGGACGAGAAGAGCATTCCCTACAAGAAGGTTGGCAAGCTGATCGTGGCCACCAATCCGGTGGAAGTGGAACGATTAAACGACTTGTATCAACGGTCGCTGGCCAACAACGTACCGGATGTGCAGGTAGTGGATCAGGCCAAAATCAAAGAGATCGAACCCGTACTGCCCANGGGGCTGAAAAGCGATCTGGTCGCCCCATACGGGCATCGGTCGACT ] [+] EMBL BX627190 [ TTTGCTACGCCACCCGGCCCTGCGGATTGCGATCGTG GAGAAGGAGCCCAAGCTGGCCTTCCATCAGAGTGGCCACAACAGTGGGGTCATCCACGCGGGCATTTACTACAAGCCGGGCTCGCTCAAGGCAAAACTGTGCGTCGAGGGACTGCACTTAAGCTACAAGTATTTGGACGAGAAGAGCATTCCCTACAAGAAGGTTGGCAAGCTGATCGTGGCCACCAATCCGGTGGAAGTGGAACGATTAAACGACTTGTATCAACGGTCGCTGGCCAACAACGTACCGGATGTGCAGGTAGTGGATCAGGCCAAAATCAAAGAGATCGAA CCGTACTG CCA GGGGCTG AAAGCGATCTGGTCGCCCCATACGGGCATC GTCGACTGGGGCCTGGTGACGCAGTACTACGGGCGCGATTTCAAGGCCGCCGGGGGCGATGTGTACATCAACTTTAAGGTGGCCAAGTTCAGCGAAGCAC C GGACAACCTCGACTACCCGATCGTGGTGCGCAGCGAG AANGGCGATGAGATACGGGCCCGCCACATACTGACCTGCGGTGGGCTGCAGTCNGACAAGATCGCNGAGATGACGGGCTG CTCGGCGGTGCCGAAAATTGTCCCCTTTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTACCCCGTGCCCGA ] [+] EMBL BX627496 [ GATCGTGGCCACCAATCCGGTGGAAGTGGAACGATTAAACGACTTGTATCAACGGTCGCTGGCCAACAACGTACCGGATGTGCAGGTAGTGGATCAGGCCAAAATCAAAGAGATCGAA CCGTACTG CCA GGGGCTG AAAGCGATCTGGTCGCCCCATACGGGCATC GTCGACTGGGGCCTGGTGACGCAGTACTACGGGCGCGATTTCAAGGCCGCCGGGGGCGATGTGTACATCAACTTTAAGGTGGCCAAGTTCAGCGAAGCAC C GGACAACCTCGACTACCCGATCGTGGTGCGCAGCGAG AAGGGCGATGAGATACGGGCCCGCCACATACTGACCTGCGGTGGGCTGCAGTCGGACAAGATCGCGGAGATGACGGGCTG CTCGGCGGTGCCGAAAATTGTCCCC TTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTACCCCGTGCCCGACCCGCGGTTCCCCTTCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAGCGTGT ] [+] EMBL BX609249 [ GGGCCTGGTGACGCAGTACTACGGGCGCGATTTCAAGGCCGCCGGGGGCGATGTGTACATCAACTTTAAGGTGGCCAAGTTCAGCGAAGCAC C GGACAACCTCGACTACCCGATCGTGGTGCGCAGCGAG AAGGGCGATGAGATACGGGCCCGCCACATACTGACCTGCGGTGGGCTGCAGTCGGATAAGATCGCGGAGATGACGGGCTG CTCGGCGGTGCCGAAAATTGTCCCC TTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTACCCCGTGCCCGACCCGCGGTTCCCCTTCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAGCGTGTGGTTGGGCCCGAACGCGGTGCTGGCGTTCCGCCGCGAGGGCTACAAGTGGTCCGACATCAACGTGCCGGAGCTGATCGATGCGCTGCGCTTCCCGGGATTCATCAAGATGGCTTCCAAGTTCGTCGGTGCGGGCATGATGGAGATTGCCCGGTCCGCGCTGATTCCGCTGCAGGTGCGCGAGCTGCAAAAGTTCATCCCCGACATCCACGAGTACGATGTGGCGCGTGGCCCGGCCGGCGTCCGGGCGCAGGCACTCGACAACGACGGCAACCTGGTGGACGATTT CGTGTTCGATCACGGGACGGGCGAGTC ] [+] EMBL BX618930 [ GCGAG AAGGGCGATGAGATACGGGCCCGCCACATACTGACCTGCGGTGGGCTGCAGTCGGACAAGATCGCGGAGATGACGGGCTG CTCGGCGGTGCCGAAAATTGTCCCC TTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTACCCCGTGCCCGACCCGCGGTTCCCCTTCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAGCGTGTGGTTGGGCCCGAACGCGGTGCTGGCGTTCCGCCGCGAGGGCTACAAGTGGTCCGACATCAACGTGCCGGAGCTGATCGATGCGCTGCGCTTCCCGGGATTCATCAAGATGGCTTCCAAGTTCGTCGGTGCGGGCATGATGGAGATTGCCCGGTCCGCGCTGATTCCGCTGCAGGTGCGCGAGCTGCAAAAGTTCATCCCCGACATCCACGAGTACGATGTGGCGCGTGGCCCGGCCGGCGTCCGGGCGCATGCACTCGACAACGACGGCAACCTGGTGGACGATTT CGTGTTCGATCACGGGACGGGCGAGTCG ] [-] EMBL CNS08FQ4 [ GGGCTGCAGTCGGACAAGATCGCGGAGATGACGGGCTGCCTC GCGGTGCCGAAAATTGTCCCC TTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTATCCCGTGCCCGACCCGC GTTCCCCTTCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAGCGTGTGGTTGGGCCCGAACGCGGTGCTTGCGTTCCGCCGGGAGGGCTACAAGTGGTCCGACATCAACGTGCCGGAGCTGATCGATGCGTTGCGGTTCCCGGGATTCATCAAGATGGCTTCCAAGTTTGTCGGTGCGGGCATGATGGAGATTGCCCGGTCCGCGCTGATTCCGCTGCAGGTGCGCGAGCTGCAAAAGTTCATCCCCGACATCCACGAGTACGATGTGGCGCGTGGCCCGGCCGGCGTCCGGGCGCAGGCACTCGACAACGACGGCAACCTGGTGGACGATTT CGTGTTCGATCACGGGACGGGCGAGTCGGTGCTGTCGAAAAACATTCTGCACTGCCGCAATGCTCCCTCGCCCGGGGCTACGAGTTCGCTGTCGATCGCTAAAATGATTGCCGACAAGATCGAGCA CGAGTTCCATATCGGAAAGTGAGTGAAGCACGCGCTTGAACGACGGTTGTTACTATTATGCGGGGGCCCTATTGCGGGGTGGAATCATATTCCACCGAAAGCCCACCCTTTCGTTGCAATTTATTTTTACGAAACTTGTTAGAGTGTACATTATTTTCTCTTGTTTAACGGTTATCGACACGCTGGTTCGTTGCATTTTACCTCGTCCCTTACAAAAGTAAGCAACAGCAAACAGACGAAA ACAAAAAGTTAAAGCGAATAAAAAAAAAGAAC ] [-] EMBL BX466903 [ CGGTCCGCGCTGATTCCGCTGCAGGTGCGCGAGCTGCAAAAGTTCATCCCCGACATCCACGAGTACGATGTGGCGCGTGGCCCGGCCGGCGTCCGGGCGCAGGCACTCGACAACGACGGCAACCTGGTGGACGATTTCCGTGTTCGATCACGGGACGGGCGAGTCGGTGCTGTCGAAAAACATTCTGCACTGCCGCAATGCCCCCTCGCCCGGGGCTACGAGTTCGCTGTCGATCGCTAAAATGATTGCCGACAAGATCGAGCA CGAGTTCCATATCGGAAAGTGAGTGAAGCACGCGCTTGAACGACGGTTGTTACTATTATGCGGGGGCCCTATTGCGGGGTGGAATCATATTCCACCGAAAGCCCACCCTTTCGTAGCAATTTATTTTTACGAAACTTGTTAGAGTGTACATTATTTTCTCTTGTTTAACGGTTATCGACACGCTGGTTCGTTGCATTTTACCTCGTCCCTTACAAAAGTAAGCAACAGCAAACAGACGAAAGACAAAAAGTTAAAGCGAATATAAAAACAAAAGGCAGGC] [-] EMBL CNS08FXB [ ATTGGGCTGCAGCTGCGCGAGCTGCAAAAGTTCATCCCCGACATCCACGAGTACGATGTGGCGCGTGGCCCGGCCGGCGTCCGGGCGCAGGCACTCGACAACGACGGCAACCTGGTGGACGATTT CGTGTTCGATCACGGGACGGGCGAGTCGGTGCTGTCGAAAAACATTCTGCACTGCCGCAATGCTCCCTCGCCCGGGGCTACGAGTTCGCTGTCGATCGCTAAAATGATTGCCGACAAGATCGAGCA CGAGTTCCATATCGGAAAGTGAGTGAAGCACGCGCTTGAACGACGGTTGTTACTATTATGCGGGGGCCCTATTGCGGGGTGGAATCATATTCCACCGAAAGCCCACCCTTTCGTTGCAgagggg ] [-] EMBL CNS08D3A [ CGCTAAAATGATTGCCGACAAGATCGAGCAGCGAGTTCCATATCGGAAAGTGAGTGAAGCACGCGCTTGAACGACGGTTGTTACTATTATGCGGGGGCCCTATTGCGGGGTGGAATCATATTCCACCGAAAGCCCACCCTTTCGTTGCAATTTATTTTTACGAAACTTGTTAGAGTGTACATTATTTTCTCTTGTTTAACGGTTATCGACACGCTGGTTCGTTGCATTTTACCTCGTCCCTTACAAAAGTAAGCAACAGCAA ] consensusID : consensus_9353#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 824 fasta sequence [ACCGTGCGGTGGCGGTTGTAGCAGCATTTCGTGCGTTCGTGTGTGTGTGTGTAGTGTGTGTAGTGTGTAAAGTTCGTTCACCACAAACATGCTGCTGTCCAGGAAAATCGTACCGCGAACGTTAGCAGGCATCGCCAGCCGCGCTTACTCCGCCGACGTCAATAGAAACTACGACATTGTGGTAGTTGGCGGTGGTATCGTCGGTACGGCCTCAGCACGCGAGATTTTGCTACGCCACCCGGCCCTGCGGATTGCGATCGTGGAGAAGGAGCCCAAGCTGGCCTTCCATCAGAGT-GGCCACAACAG-TGGGGTCATCCACGCGGGCATTTACTACAAGCCGGGCTCGCTCAAGGCAAAACTGTGCGTCGAGGGACTGCACTTAAGCTACAAGTATTTGGACGAGAAGAGCATTCCCTACAAGAAGGTTGGCAAGCTGATCGTGGCCACCAATCCGGTG-GAAGTGGAACGATTAAACCAACCCGCTCTGTGGCTATCTGATGCGATGCGTATGTGTACGTAGAAGCAATTGCTTTGTACGAGGGGTGGGAGTTAATGCACCAACACTTTGGGGTGAATGTCATTGGCGTAAAGTAGGACAACACAGCGCAATCGGGGATGCAACCCATTAACAGGACTTGTATCAACGGTCGCTGGCCAACAACGTACCGGATGTGCAGGTAGTGGATCAGGCCAAAATCAAAGAGATCGAACCGTACTGCCAGGGGCTGAAAGCGATCTGGTCGCCCCATACGGGCATCGTCGACTGGGGGCTGGTGACGCAGTACTACGGGCGCGATTTCAAGGGCGCCGGGGGGCGATGTGTA] [+] EMBL BX624535 [ACCGTGCGGTGGCGGTTGTAGCAGCATTTCGTGCGTTCGTGTGTGTGTGTGTAGTGTGTGTAGTGTGTAAAGTTCGTTCACCACAAACATGCTGCTGTCCAGGAAAATCGTACCGCGAACGTTAGCAGGCATCGCCAGCCGCGCTTACTCCGCCGACGTCAATAGAAACTACGACATTGTGGTAGTTGGCGGTGGTATCGTCGGTACGGCCTCAGCACGCGAGATTTTGCTACGCCACCCGGCCCTGCGGATTGCGATCGTGGAGAAGGAGCCCAAGCTGGCCTTCCATCAGAGT GGCCACAACAG TGGGGTCATCCACGCGGGCATTTACTACAAGCCGGGCTCGCTCAAGGCAAAACTGTGCGTCGAGGGACTGCACTTAAGCTACAAGTATTTGGACGAGAAGAGCATTCCCTACAAGAAGGTTGGCAAGCTGATCGTGGCCACCAATCCGGTG GAAGTGGAACGATTAAACCAACCCGCTCTGTGGCTATCTGATGCGATGCGTATGTGTACGTAGAAGCAATTGCTTTGTACGAGGGGTGGGAGTTAATGCACCAACACTTTGGGGTGAATGTCATTGGCGTAAAGTAGGACAACACAGCGCAATCGGGGATGCAACCCATTAACAGGACTTGTATCAACGGTCGCTGGCCAACAACGTACCGGATGTGCAGGTAGTGGATCAGGCCAAAATCAAAGAGATCGAACCGTACTGCCAGGGGCTGAAAGCGATCTGGTCGCCCCATACGGGCATCGTCGACTGGGGGCTGGTGACGCAGTACTACGGGCGCGATTTCAAGGGCGCCGGGGGGCGATGTGTA] [+] EMBL CNS08FXA [ cgcAGCCCAAGCTGGCCTTCCACCAGAGTGGGCCACAACAGCTGGGGTCATCCACGCGGGCATCTACTACAAGCCGGGCTCGCTCAAGGCGAAACTGTGCGTCGAGGGACTGCACTTAAGCTACAAGTATTTGGACGAGAAGAGCATTCCCTACAAGAAGGTTGGCAAGCTGATCGTGGCCACCAATCCGGTGCGAAGTGGAA ] consensusID : consensus_9353#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 572 fasta sequence [TCGCCCGAGGTTNCTGCCAGGGGCTGAAAGCGATCTGGTCGCCCCATACGGGCATCGTCGACTGGGGCCTGGTGACGCAGTACTACGGGCGCGATTTCAAGGGCCGCCGGGGGCGATGTGTACATCAACTTTAAGGTGGCCAAGTTCAGCGAAGCACCGGACAACCTCGACTACCCGATCGTGGTGCGCAGCGAGAAGGGCGATGAGATACGGGCCCGCCACATACTGACCTGCGGTGGGCTGCAGTCGGACAAGATCGCGGAGATGACGGGCTGCTCGGCGGTGCCGAAAATTGTCCCCTTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTACCCCGTGCCCGACCCGCGGTTCCCCTTCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAGCGTGTGGTTGGGCCCGAACGCGGTGCTGGCGTTCCGCCGCGAGGGCTACAAGTGGTCCGACATCAACGTGCCGGAGCTGATCGATGCGCTGCGCTTCCCGGGATTCATCAAGATGGCTTCCAAGTTCGTCGGTGCGGGCATGATGGA] [+] EMBL AL933174 [TCGCCCGAGGTTNCTGCCAGGGGCTGAAAGCGATCTGGTCGCCCCATACGGGCATCGTCGACTGGGGCCTGGTGACGCAGTACTACGGGCGCGATTTCAAGGGCCGCCGGGGGCGATGTGTACATCAACTTTAAGGTGGCCAAGTTCAGCGAAGCACCGGACAACCTCGACTACCCGATCGTGGTGCGCAGCGAGAAGGGCGATGAGATACGGGCCCGCCACATACTGACCTGCGGTGGGCTGCAGTCGGACAAGATCGCGGAGATGACGGGCTGCTCGGCGGTGCCGAAAATTGTCCCCTTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTACCCCGTGCCCGACCCGCGGTTCCCCTTCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAGCGTGTGGTTGGGCCCGAACGCGGTGCTGGCGTTCCGCCGCGAGGGCTACAAGTGGTCCGACATCAACGTGCCGGAGCTGATCGATGCGCTGCGCTTCCCGGGATTCATCAAGATGGCTTCCAAGTTCGTCGGTGCGGGCATGATGGA] consensusID : consensus_9353#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 433 fasta sequence [ATCCGAGGTTATGAGATCGGGCCGCACATACTGACTGCGGTGGGCTGCAGTCGGACAAGATCGCGGAGATGACGGGCTGCTCGGCGGTGCCGAAAATTGTCCCCTTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTACCCCGTGCCCGACCCGCGGTTCCCCTTCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAGCGTGTGGTTGGGCCCGAACGCGGTGCTGGCGTTCCGCCGCGAGGGCTACAAGTGGTCCGACATCAACGTGCCGGAGCTGATCGATGCGCTGCGCTTCCCGGGATTCATCAAGATGGCTTCCAAGTTCGTCGGTGCGGGCATGATGGAGATTGCCCGGTCCGCGCTGATTCCGCTGCAGGTGCGCGAGCTGCAAAAGTTCATCCC] [+] EMBL AL694676 [ATCCGAGGTTATGAGATCGGGCCGCACATACTGACTGCGGTGGGCTGCAGTCGGACAAGATCGCGGAGATGACGGGCTGCTCGGCGGTGCCGAAAATTGTCCCCTTCCGGGGCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGGGCAACATTTACCCCGTGCCCGACCCGCGGTTCCCCTTCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAGCGTGTGGTTGGGCCCGAACGCGGTGCTGGCGTTCCGCCGCGAGGGCTACAAGTGGTCCGACATCAACGTGCCGGAGCTGATCGATGCGCTGCGCTTCCCGGGATTCATCAAGATGGCTTCCAAGTTCGTCGGTGCGGGCATGATGGAGATTGCCCGGTCCGCGCTGATTCCGCTGCAGGTGCGCGAGCTGCAAAAGTTCATCCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 AAGGGTTTTATTTTAAGTCCTCGATCCACACCGTGCGGTGGCGGTTGTAGCAGCATTTCG 60 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 TGCGTTCGTGTGTGTGTGTAGTGTGTGTAGTGTGTAAAGTTCGTTCACCACAAACATGCT 120 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 GCTGTCCAGGAAAATCGTACCGCGAACGTTAGCAGGCATCGCCAGCCGCGCTTACTCCGC 180 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 CGACGTCAATAGAAACTACGACATTGTGGTAGTTGGCGGTGGTATCGTCGGTACGGCCTC 240 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 AGCACGCGAGATTTTGCTACGCCACCCGGCCCTGCGGATTGCGATCGTGGAGAAGGAGCC 300 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 CAAGCTGGCCTTCCATCAGAGTGGCCACAACAGTGGGGTCATCCACGCGGGCATTTACTA 360 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 CAAGCCGGGCTCGCTCAAGGCAAAACTGTGCGTCGAGGGACTGCACTTAAGCTACAAGTA 420 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 TTTGGACGAGAAGAGCATTCCCTACAAGAAGGTTGGCAAGCTGATCGTGGCCACCAATCC 480 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 GGTGGAAGTGGAACGATTAAACGACTTGTATCAACGGTCGCTGGCCAACAACGTACCGGA 540 consensus_9353#1 -ACCGTGCGGTGGCGGTTGTAGCAGCATTTCGTGCGTTCGTGTGTGTGTGTGTAGTGTGT 59 consensus_9353#2 --------------------------------TCGCCCGAGGTTNCTGCCAGGGGCTGAA 28 consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 TGTGCAGGTAGTGGATCAGGCCAAAATCAAAGAGATCGAACCGTACTGCCAGGGGCTGAA 600 consensus_9353#1 GTAGTGTGTAAAGTTCGTTCACCACAAACATGCTGCTGTCCAGGAAAATCGTACCGCGAA 119 consensus_9353#2 AGCGATCTGGTCGCCCCATACGGGCATCGTCGACTGGGGCCTGGTGACGCAGTACTACGG 88 consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 AGCGATCTGGTCGCCCCATACGGGCATCGTCGACTGGGGCCTGGTGACGCAGTACTACGG 660 consensus_9353#1 CGTTAGCAGGCATCGCCAGCCGCGCTTACTCCGCCGACGTCAATAGAAACTACGACATTG 179 consensus_9353#2 GCGCGATTTCAAGGGCCGCCG--GGGGCGATGTGTACATCAACTTTAAGGTGGCCAAGTT 146 consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 GCGCGATTTCAAGG-CCGCCG--GGGGCGATGTGTACATCAACTTTAAGGTGGCCAAGTT 717 consensus_9353#1 TGGTAGTTGGCGGTGGTATCGTCGGTACGGCCTCAGCACGCGAGATTTTGCTACGCCACC 239 consensus_9353#2 CAGCGAAGCACCGGACAACCTCG----ACTACCCGATCGTGGTGCGCAGCGAGAAGGGCG 202 consensus_9353#3 --------------------------------------------------ATCCGAGGTT 10 consensus_9353#0 CAGCGAAGCACCGGACAACCTCG----ACTACCCGATCGTGGTGCGCAGCGAGAAGGGCG 773 consensus_9353#1 CGGCCCTGCGGATTGCGATCGTGGAGAAGGAGCCCAAGCTGGCCTTCCATCAGAGTGGCC 299 ** consensus_9353#2 ATGAGATACGGGCCCGCCACATACTGACCTGCGGTGGGCTGCAGTCG-----GACAAGAT 257 consensus_9353#3 ATGAGAT-CGGGCCG--CACATACTGAC-TGCGGTGGGCTGCAGTCG-----GACAAGAT 61 consensus_9353#0 ATGAGATACGGGCCCGCCACATACTGACCTGCGGTGGGCTGCAGTCG-----GACAAGAT 828 consensus_9353#1 ACAACAGTGGGGTCATCCACGCGGGCATTTACTACAAGCCGGGCTCGCTCAAGGCAAAAC 359 * * * *** * *** * * * ** * *** * *** * consensus_9353#2 CGCGGAGATGACGGGCTGCTCGGCGGTGCCGAAAATT----------GTCCCCTTCCGGG 307 consensus_9353#3 CGCGGAGATGACGGGCTGCTCGGCGGTGCCGAAAATT----------GTCCCCTTCCGGG 111 consensus_9353#0 CGCGGAGATGACGGGCTGCTCGGCGGTGCCGAAAATT----------GTCCCCTTCCGGG 878 consensus_9353#1 TGTGC-GTCGAGGGACTGCACTTAAGCTACAAGTATTTGGACGAGAAGAGCATTCCCTAC 418 * * * ** ** **** * * * * *** * * * ** consensus_9353#2 GCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGG-GCAACATTTACCCC 366 consensus_9353#3 GCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGG-GCAACATTTACCCC 170 consensus_9353#0 GCGAGTACCTGCTGCTCAACCCGGACAAGTGCCACATGGTGCGGG-GCAACATTTACCCC 937 consensus_9353#1 AAGAAGGTTGGCAAGCTGATCGTGGCCA--CCAATCCGGTGGAAGTGGAACGATTAAACC 476 ** ** * * * * * * * **** * * *** *** ** consensus_9353#2 GTGCCCGACCCGCGGTTCCCCT-TCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAG 425 consensus_9353#3 GTGCCCGACCCGCGGTTCCCCT-TCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAG 229 consensus_9353#0 GTGCCCGACCCGCGGTTCCCCT-TCCTAGGCGTACACTTTACGCCCCGCATGGACGGCAG 996 consensus_9353#1 A-ACCCGCTCTGTGGCTATCTGATGCGATGCGTATG---TGTACGTAGAAGCAATTGCTT 532 **** * * ** * * * * * ***** * * * * * ** consensus_9353#2 CGTGTGGTTGGGCCCGAACGCGGTGCTGGCGTTCCGCCGCGAGGGCTACAAGTGGTCCG- 484 consensus_9353#3 CGTGTGGTTGGGCCCGAACGCGGTGCTGGCGTTCCGCCGCGAGGGCTACAAGTGGTCCG- 288 consensus_9353#0 CGTGTGGTTGGGCCCGAACGCGGTGCTGGCGTTCCGCCGCGAGGGCTACAAGTGGTCCG- 1055 consensus_9353#1 TGTACGAGGGGTGGGAGTTAATGCACCAACACTTTGGGGTGAATGTCATTGGCGTAAAGT 592 ** * ** * * * * * * ** * * * * * consensus_9353#2 ACATCAACGTGCCGGAGCTGATCGATGCGCTGCGCTTCCCGGGATT-CATCAA-----GA 538 consensus_9353#3 ACATCAACGTGCCGGAGCTGATCGATGCGCTGCGCTTCCCGGGATT-CATCAA-----GA 342 consensus_9353#0 ACATCAACGTGCCGGAGCTGATCGATGCGCTGCGCTTCCCGGGATT-CATCAA-----GA 1109 consensus_9353#1 AGGACAACACAGCGCAATCGGG-GATGCAACCCATTAACAGGACTTGTATCAACGGTCGC 651 * **** ** * * ***** * * * ** ** ***** * consensus_9353#2 TGGCTTCCAAGTTCGTCGGTGCGGGCATGATGGA-------------------------- 572 consensus_9353#3 TGGCTTCCAAGTTCGTCGGTGCGGGCATGATGGAGATTGCCCGGTCCGCGCTGATTCCGC 402 consensus_9353#0 TGGCTTCCAAGTTCGTCGGTGCGGGCATGATGGAGATTGCCCGGTCCGCGCTGATTCCGC 1169 consensus_9353#1 TGGCCAACAACGTACCGGATGTGCAGGTAGTGGATCAGGCCAAAATCAAAGAGATCGAAC 711 **** *** * * ** * * **** consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 TGCAGGTGCGCGAGCTGCAAAAGTTCATCCC----------------------------- 433 consensus_9353#0 TGCAGGTGCGCGAGCTGCAAAAGTTCATCCCCGACATCCACGAGTACGATGTGGCGCGTG 1229 consensus_9353#1 CGTACTGCCAGGGGCTGAAAGCGATCTGGTCGCCCCATACGGGCATCGTCGACTGGGGGC 771 consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 GCCCGGCCGGCGTCCGGGCGCAGGCACTCGACAACGACGGCAACCTGGTGGACGATTTCG 1289 consensus_9353#1 TGGTGACGCAGTACTACGGGCGCGATTTCAAGGGCGCCGGGGGGCGATGTGTA------- 824 consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 TGTTCGATCACGGGACGGGCGAGTCGGTGCTGTCGAAAAACATTCTGCACTGCCGCAATG 1349 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 CTCCCTCGCCCGGGGCTACGAGTTCGCTGTCGATCGCTAAAATGATTGCCGACAAGATCG 1409 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 AGCACGAGTTCCATATCGGAAAGTGAGTGAAGCACGCGCTTGAACGACGGTTGTTACTAT 1469 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 TATGCGGGGGCCCTATTGCGGGGTGGAATCATATTCCACCGAAAGCCCACCCTTTCGTTG 1529 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 CAATTTATTTTTACGAAACTTGTTAGAGTGTACATTATTTTCTCTTGTTTAACGGTTATC 1589 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------------------------ consensus_9353#3 ------------------------------------------------------------ consensus_9353#0 GACACGCTGGTTCGTTGCATTTTACCTCGTCCCTTACAAAAGTAAGCAACAGCAAACAGA 1649 consensus_9353#1 ------------------------------------------------------------ consensus_9353#2 ------------------------------------------- consensus_9353#3 ------------------------------------------- consensus_9353#0 CGAAAACAAAAAGTTAAAGCGAATAAAAAAAAAGAACGCAGGC 1692 consensus_9353#1 ------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||