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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9358#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1678 fasta sequence
[CCGCCCACGCGTCCGTGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAGATGAAACCACTGATCGTACGATCGACCGTACCGATCGAGGCGGGCCAGTGGCATACGGTGTCGGCGGGACGCACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAGGCCGTCAACAACGAGATGTCCAACCGCAACACGCCGATCCTGCTGAAGACGAAGGTGTACGCCGGTGGCTACGATAAGCGCCTGCTGCTCAGCCAAGAGATTGGTGTCCGACGCGGTTTTGAGGGTTGCATTGCTGAGCTGGAAACGTCCGGCAACAAGCTGAACATGATCGACGATATTCGCGACTCGGCGAACGTTTACCACTGTGGCCACGCGGACGGCCATCAGCCGGATCCGATCGACGTCGAAAGCCCCGTCACCTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTTACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGC-TTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCG-AAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCGTACGAGCCGAACGGGCTGCTGATCTGGTACGG-CCAGCGCAACGGTGAGGAGTTCCTCGGCAACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTTACGAT-CCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTGGCGC-TGGTCCGGCGGGAGCGCAACCAGTTCCATCTGCAGGTCGATTCGCTGACGGTGCACGGTGAAACGCGCCCGACCGGCAAGCAGACGATGGAAATACCCGGCAGCTTCTACGTCGGCGGTGTTCCGGACGTCGAACGCGTTACCGGCAATCGGTTCAACGAGAGCTTCAACGGGTGCGTCTTCTCTGTGGAGAACAATGAGGGCAAGGCGATCTTACTGCGCGACTTTACCATCCGAACCGTCAACGTGGACGTGTGCGACGAACCCAATCTAGGAACGGATCCACCAGTGGTGTAAAAACAGAAAAAAAAACATACAAAATAAACCACCCAATACTTCCAACGAGCGGAGGGAGGAGGAGGCCGCAGGAGCTTCTCGCTATGGGGCCACCAACGAAACAGCGGTACCCACCTTCACCCAACAAAAGGATGAACCGCTCTAGAGGGTGATGTAAGTCGAGTGACAAAATAACCAACTGCTCGGCTGGTTAAAGGAGGGAGTTGAAGAGTTAAGCAGGACTAAAATGAACAGAAAAATAACATAT-AAAAAAATACTAAAACTGTATCGTATACCTATAGAGAAGCGCAAACGAATGCACAGTGAAGAGAGGAAGCAAAA--AAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGCCAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGAGAACAAGACAGCCATATTTGTTTGTTTAACACCACCACATTGGTCAATG]
[+] EMBL BM622816 [CCGCCCACGCGTCCGTGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAGATGAAACCACTGATCGTACGATCGACCGTACCGATCGAGGCGGGCCAGTGGCATACGGTGTCGGCGGGACGCACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAGGCCGTCAACAACGAGATGTCCAACCGCAACACGCCGATCCTGCTGAAGACGAAGGTGTACGCCGGTGGCTACGATAAGCGCCTGCTGCTCAGCCAAGAGATTGGTGTCCGACGCGGTTTTGAGGGTTGCATTGCTGAGCTGGAAACGTCCGGCAACAAGCTGAACATGATCGACGATATTCGCGACTCGGCGAACGTTTACCACTGTGGCCACGCGGACGGCCATCAGCCGGATCCGATCGACGTCGAAAGCCCCGTCACCTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTTACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGCTTTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCGTAAAGCCAGATC ]
[+] EMBL BX619015 [ TACGGTGTCTGCGGGACGCACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAGGCCGTCAACAACGAGATGTCCAACCGCAACACGCCGATCCTGCTGAAGACGAAGGTGTACGCCGGTGGCTACGATAAGCGCCTGCTGCTCAGCCAAGAGATTGGTGTCCGACGCGGTTTTGAGGGTTGCATTGCTGAGCTGGAAACGTCCGGCAACAAGCTGAAAATGATCGACGATATTCGCGACTCGGCGAACGTTTACCACTGTGGCCATGCGGACGGCCATCAGCCGGATCCGATCGACGTCGAAAGCCCCGTCACCTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTTACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGC TTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCG AAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCGTACGAGCCGAACGGGCTGCTGATCTGGTACGG CCAGCGCAACGGTGAGGAGTTCCTCGGGCACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTGACGAT CCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCca ]
[+] EMBL BM618530 [ cCGGTTTTGAGGGTTGCATTGCTGAGCTGGAAACGTCCGGCAACAAGCTGAACATGATCGACGATATTCGCGACTCGGCGAACGTTTACCACTGTGGCCACGCGGACGGCCATCAGCCGGATCCGATCGACGTCGAAAGCCCCGTCACCTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTTACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGC TTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCG AAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCGTACGAGCCGAACGGGCTGCTGATCTGGTACGG CCAGCGCAACGGTGAGGAGTTCCTCGGCAACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTTACGATCCCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTGGCGCTTGGTCCGGCGGGAGCGCAACCAGTTCCATCTGCAGGTCGATTCGCTGACGGTGCACGGT ]
[+] EMBL BX623582 [ CTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTTACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGC TTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCG AAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCGTACGAGCCGAACGGGCTGCTGATCTGGTACGG CCAGCGCAACGGTGAGGAGTTCCTCGGCAACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTGACGAT CCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTGGCGC TGGTCCGGCGGGAGCGCAACCAGTT CATCTGCAGGTCGATTCGCTGACGGTGCACGGTG ]
[+] EMBL BM630053 [ ccgAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCGGGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACCCAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGC TTCATCGAGGTCAGCCCGAAGGCGTTCAAGCACAGCG AAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCGTACGAGCCGAACGGGCTGCTGATCTGGTACGG CCAGCGCAACGGTGAGGAGTTCCTCGGCAACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTTACGAT CCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTGGCGC TGGTCCGGCGGGAGCGCAACCAGTTCCATCTGCAGGTCGATTCGCTGACGGTGCACGGTGAAACGCGCCCGACCGGCAAGCAGACGATGGAAATACCCGGCAGCTTCTACGTCGGCGGTGTTCCGGACG ]
[+] EMBL BM595491 [ cCGGTCCAGCGCAACGGTGAGGAGTTCCTCGGCAACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTTACGAT CCGCATGGACGGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTGGCGC TGGTCCGGCGGGAGCGCAACCAGTTCCATCTGCAGGTCGATTCGCTGACGGTGCACGGTGAAACGCGCCCGACCGGCAAGCAGACGATGGAAATACCCGGCAGCTTCTACGTCGGCGGTGTTCCGGACGTCGAACGCGTTACCGGCAATCGGTTCAACGAGAGCTTCAACGGGTGCGTCTTCTCTGTGGAGAACAATGAGGGCAAGGCGATCTTACTGCGCGACTTTACCATCCGAACCGTCAACGTGGACGTGTGCGACGAACCCAATCTAGGAACGGATCCACCAGTGGTGTAAAAACAGAAAAAAAAACATACAAAATAAACCACCCAATTCTTCCAACGAGCGGAGGGAGGAGGAGGCCGCAGGAGCTTCTCGCTATGGGGCCATCAACGAAACAGCGGTACCCACCTTCACCCAACAAAAGGATGAACCGCTCTAAAGGGTGATGTAAGTCGAGTGACAAAATAACCAACTGCTCGGCTGG ]
[+] EMBL BM590386 [ ccgGTTCCGGACGTCGAACGCGTTACCGGCAATCGGTTCAACGAGAGCTTCAACGGGTGCGTCTTCTCTGTGGAGAACAATGAGGGCAAGGCGATCTTACTGCGCGACTTTACCATCCGAACCGTCAACGTGGACGTGTGCGACGAACCCAATCTAGGAACGGATCCACCAGTGGTGTAAAAACAG AAAAAAGCATACAAAATAAACCACCCAATACTTCCAACGAGCGGAGGGAGGAGGAGGCTGCAGGAGCTTCTCGCTATGGGGCCACCAACGAAACAGCGGTACCCACCTTCACCCAACAAAAGGATGAACCGCTCTAGAGGGTGATGTAAGTCGAGTGACAAAATAACCAACTGCTCGGCTGGTTAAAGGAGGGAGTTGAAGAGTTAAGCAGGACTAAAATGAACAGAAAAATAACATAT AAAAAAATACTAAAACTGTATCGTATACCTATAGAGAAGCGCAAACGAATGCACAGTGAAGAGAGGAAGCAAAATGAAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGCCAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGAGAACAAGACAGCCATATTTGTTTGTTTAACACCACCACATTGGTCAATG]
[-] EMBL AGA281046 [ TCCGAACCGTCAACGTGGACGTGTGCGACGAACCCAATCTAGGAACGGATCCACCAGTGGTGTAAAAACAGAAAAAAAAACATACAAAATAAACCACCCAATACTTCCAACGAGCGGAGGGAGGAGGAGGCCGCAGGAGCTTCTCGCTATGGGGCCACCAACGAAACAGCGGTACCCAACTTCACCCAACAAAAGGATGAACCGCTCTAGAGGGTGATGTAAGTCGAGTGACAAAATAACCAACTGCTCGGCTGGTTAAAGGAGGGAGTTGAAGAGTTAAGCAGGACTAAAATGAACAGAAAAATAACATATAAAAAAAATACTAAAACTGTATCGTATACCTATAGAGAAGCGCAAACGAATGCACAGTGAAGAGAGGAAGCAAAA AAAA ]
consensusID : consensus_9358#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 788 fasta sequence
[GCCCCGAGGTTTAATACTANNACTGTATCGTATACCTATAGAGAAGCGCAAACGAA-TGCACA-G-TGAA-GAGGGGAAGCAAAATGAAAA-AACACGCGTACA-GTAACGAACAACG-AATGTGCCAA-ATAAATGTAGTATTTATGTAAAA---AAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTT-TAACACCACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAG-GTTTTTTTTAGCACTGCCAACTTTCGTTTCCCACAACATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTT-GTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGAGCAAGAAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAACTAACTGCCCGCTGTAATGGTCTTCATTTCTATACACTAAGTGCTTTCGATATGTTAAAAAAAAACACGAAGATACGAGCAAAACAGATAGGAGAGATTAAATCAAACGATGTTGAACATAATGTAGCCCTT]
[+] EMBL AL932118 [GCCCCGAGGTTTAATACTANNACTGTATCGTATACCTATAGAGAAGCGC AACGAACTGCACACGCTGAANNAGGGGAAGCAAAATGAAAANAACACGCGTACAGGTAACGAACAACGCAATGTGCCAACATAAATGTAGTATTTATGTAACANCCAACCGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTCTAACACCACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAG GTTTTTCTTAGCACTGCCAACTTTCGTTTCCCACAACATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTTCGTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGAGCAAGAAGTAGCTTCCTGCCGTTTCGAAAAG ]
[+] EMBL BX625071 [ TGTATCGTATACCTATAGAGAAGCGCAAACGAA TGCACA G TGAA GAGGGGAAGCAAAATGAAAA AACACGCGTACA GTAACGAACAACG AATGTGCCAA ATAAATGTAGTATTTATGTAAAA AAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTT TAACACCACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAG GTTTTTTTTAGCACTGCCAACTTTCGTTTCCCACAACATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTT GTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGAGCAAGAAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAACTAACTGCCCGCTGTAATGGTCTTCATTTCTATACACTAAGTGCTTTCGATATGTTAAAAAAAAACACGAAGATACGAGCAAAACAGATAGGAGAGATTAAATCAAACGATGTTGAACATAATGTAGCCCTT]
[+] EMBL BX611398 [ AAGCGCAAACGAA TGCACA G TGAA GAGGGGAAGCAAAATGAAAA AACACGCGTACA GTAACGAACAACG AATGTGCCAA ATAAATGTAGTATTTATGTAAAA AAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTT TAACACCACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAG GTTTTTTTTAGCACTGCCAACTTTCGTTTCCCACAACATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTT GTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGAGCAAGAAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAACTAACTGCCCGCTGTAATGGTCTTCATT ]
[+] EMBL BX611254 [ ATGTAAAA AAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGATAACAAGACAACCATATTTGTTTGTT TAACACCACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAGTTTTTTTTTTAGCACTGCCAACTTTCGTTTCCCACAACATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATATCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTT GTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGAGCAAGAAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAAC ]
consensusID : consensus_9358#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 603 fasta sequence
[AAGCAAAATGAAAAAAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGCCAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTTAACACCACCACATTGATTAATGCAATATACATAAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAGGTTTTATTAGCACTGCCAACTTTCGTTCCCCACAAGATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTTTCACTCACAAAACAAGTCAAACAAACCACTGCGCAGTGATTGTTTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTTGTTACTAGCCTTGTAATCTTGGCGGCATAAGCCAGTTTATGTTTTGAGCAAGAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAACTAACTGCCCGCTGTAATGG]
[+] EMBL BX609508 [AAGCAAAATGAAAAAAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGCCAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTTAACACCACCACATTGATTAATGCAATATACATAAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAGGTTTTATTAGCACTGCCAACTTTCGTTCCCCACAAGATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTTTCACTCACAAAACAAGTCAAACAAACCACTGCGCAGTGATTGTTTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACCATCTTGTTGTTACTAGCCTTGTAATCTTGGCGGCATAAGCCAGTTTATGTTTTGAGCAAGAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCAACTAACTGCCCGCTGTAATGG]
[+] EMBL BX609620 [ GTGCCAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACAGTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTTAACACCACCACATTGATTAATGCAATATACATAAAGCACCACACACTCAGTGCACGGTGGCAGAGAACCACGTGGCGATACGTGCACTAAGGTTTTATTAGCACTGCCAACTTTCGTTCCCCACAAGATATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACACTGTGATAGTGTACCGACCATAGCAATGTTAAATATGTTTCACTCACAAAACAAGTCAAACAAACCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGT ]
consensusID : consensus_9358#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 314 fasta sequence
[GACAAATTCCAATCGAAACGAAGCATCCGCTTCCGCTTCAAGCCCGACTCGCTGGAGAATGGCATAATGTTCTATGCGGCGGAGCACGAGCAAGGATATGGAGATTTCATGGCCGTGCTGCTGAACAATGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAGATGAAACCACTGATCGTACGATCGACCGTACCGATCGAGGCGGGCCAGTGGCATACGGTGTCTGCGGGACGCACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAGGCCGTCAACAACGAGATGTCCAACCGCAACACGCCGAT]
[+] EMBL AGA282674 [GACAAATTCCAATCGAAACGAAGCATCCGCTTCCGCTTCAAGCCCGACTCGCTGGAGAATGGCATAATGTTCTATGCGGCGGAGCACGAGCAAGGATATGGAGATTTCATGGCCGTGCTGCTGAACAATGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAGATGAAACCACTGATCGTACGATCGACCGTACCGATCGAGGCGGGCCAGTGGCATACGGTGTCTGCGGGACGCACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAGGCCGTCAACAACGAGATGTCCAACCGCAACACGCCGAT]
consensusID : consensus_9358#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 254 fasta sequence
[TTATTCGCATAGACAATTCCATCGAAACGAAGCATCGCTTTCGCTTCAGCCCGACTCGCTGGAGAATGGNATAATGTTCTATGCGGGGAGCACGAGCACGATATGAGATTTTCATGGCCGTGCTTGGCTGAAACAATGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAAGATGAAAACCACTGATCTGTACGATCGACCGTTACCGATCGAAGCGGGCCCGTGGCATACGGTGTCTGCGGGACGCACCAA]
[+] EMBL AL932865 [TTATTCGCATAGACAATTCCATCGAAACGAAGCATCGCTTTCGCTTCAGCCCGACTCGCTGGAGAATGGNATAATGTTCTATGCGGGGAGCACGAGCACGATATGAGATTTTCATGGCCGTGCTTGGCTGAAACAATGGTTTCGTTGAAATACGCTACAGTGTAGCTGGAAAAGATGAAAACCACTGATCTGTACGATCGACCGTTACCGATCGAAGCGGGCCCGTGGCATACGGTGTCTGCGGGACGCACCAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 -----------------------------------------------------------T 1
consensus_9358#0 ------------------------------------------------------------
consensus_9358#1 GCCCCGAGGTTTAATACTANNACTGTATCGTATACCTATAGAGAAGCGCAAACGAATGCA 60
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 --------GACAAATTCCAATCGAAACGAAGCATCCGCTTCCGCTTCAAGCCCGACTCGC 52
consensus_9358#4 TATTCGCATAGACAATTCCATCGAAACGAAGCATC-GCTTTCGCTTCA-GCCCGACTCGC 59
consensus_9358#0 ------------------------------------------------------------
consensus_9358#1 CAGTGAAGAGGGGAAGCAAAATGAAAAAACACGCGTACAGTAACGAACAACGAATGTGCC 120
consensus_9358#2 ------AAGCAAAATGAAAAAAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGCC 54
consensus_9358#3 TGGAGAATGGCATAATGTTCTATGCGGC-GGAGCACGAGCAAGGATATGGAGATTTCATG 111
consensus_9358#4 TGGAGAATGGNATAATGTTCTATGCGG--GGAGCACGAGCACG-ATATGAGATTTTCATG 116
consensus_9358#0 ------------------------------------------------------------
consensus_9358#1 AAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACA 180
consensus_9358#2 AAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCACA 114
consensus_9358#3 GCCG-TGCT--GCTGAA-CAATGGTTTCGTTGAAATACGCTACAGTG--TAGCTGGAAA- 164
consensus_9358#4 GCCG-TGCTTGGCTGAAACAATGGTTTCGTTGAAATACGCTACAGTG--TAGCTGGAAAA 173
consensus_9358#0 -CCG-CCCA----CGCGTCCGTGGTTTCGTTGAAATACGCTACAGTG--TAGCTGGAAA- 51
consensus_9358#1 GTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTTAACAC 240
consensus_9358#2 GTCAACGCTCAAATTCACGCGCTGCTGAGAACAAGACAACCATATTTGTTTGTTTAACAC 174
* * * * * ** * * * * * * * * *
consensus_9358#3 GATGAAA-CCACTGAT-C-GTACG-ATCGACCGT-AC-CGATCGAGGCGGGCCAGTGGCA 218
consensus_9358#4 GATGAAAACCACTGAT-CTGTACG-ATCGACCGTTAC-CGATCGAAGCGGGCCCGTGGCA 230
consensus_9358#0 GATGAAA-CCACTGAT-C-GTACG-ATCGACCGT-AC-CGATCGAGGCGGGCCAGTGGCA 105
consensus_9358#1 CACCACATTTGTCAATGCAATATACATGAAGCACCACACACTCAGTGCACGGTGGCAGAG 300
consensus_9358#2 CACCACATTGATTAATGCAATATACATAAAGCACCACACACTCAGTGCACGGTGGCAGAG 234
* * * ** * ** ** * * ** * ** ** * * *
consensus_9358#3 TACGGTGTCTGCGGGACG--CACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAG 276
consensus_9358#4 TACGGTGTCTGCGGGACG--CACCAA---------------------------------- 254
consensus_9358#0 TACGGTGTCGGCGGGACG--CACCAAGGCCGGTATCGGCTATCTGCAGGTCGACGATGAG 163
consensus_9358#1 AACCACGT-GGCGATACGTGCACTAAGGTTTTTTTTAGCA--CTGCCAACTTTCGTTTCC 357
consensus_9358#2 AACCACGT-GGCGATACGTGCACTAAGGTTTTATT-AGCA--CTGCCAACTTTCGTTCCC 290
** ** *** *** *** **
consensus_9358#3 GCCGTCAACAACGAGATGTCCAACCGCAACACGCCGAT---------------------- 314
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GCCGTCAACAACGAGATGTCCAACCGCAACACGCCGATCCTGCTGAAGACGAAGGTGTAC 223
consensus_9358#1 CACAACA-TATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACAC-TGT 415
consensus_9358#2 CACAAGA-TATAATGATTTTGCGCTATAATGTTTTGTTTCAACAACACCTTCACAC-TGT 348
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GCCGGTGGCTACGATAAGCGCCTGCTGCTCAGCCAAGAGATTGGTGTCCGACGCGGTTTT 283
consensus_9358#1 GATAGTGTACCGACCATAGCAATGTTAAATATGTCTCACGCACAAAACAAGTCAGACAAA 475
consensus_9358#2 GATAGTGTACCGACCATAGCAATGTTAAATATGTTTCACTCACAAAACAAGTCAAACAAA 408
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GAGGGTTGCATTGCTGAGCTGGAAACGTCCGGCAACAAGCTGAACATGATCGACGATATT 343
consensus_9358#1 CCACTGCGCAGTGATTGTGTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACC 535
consensus_9358#2 CCACTGCGCAGTGATTGTTTTCATCCGTTTAGACAAATCGTTTAGGTGCAGTATCTCACC 468
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 CGCGACTCGGCGAACGTTTACCACTGTGGCCACGCGGACGGCCATCAGCCGGATCCGATC 403
consensus_9358#1 ATCTTGTTGTTACTAGCCTTGTATTGTAATCTTGGCCGCATAAGCCAGTTTATGTTTTGA 595
consensus_9358#2 ATCTTGTTGTTACTAGCCT-----TGTAATCTTGGCGGCATAAGCCAGTTTATGTTTTGA 523
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GACGTCGAAAGCCCCGTCACCTGCCGGCCGGGCCGCGGCGGATACGATTGCGACACCGTT 463
consensus_9358#1 GCAAGAAGTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCA 655
consensus_9358#2 GCAAGA-GTAGCTTCCTGCCGTTTCGAAAAGGTGGCGAGGATACTTCTCTACTACTTCCA 582
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 ACCGACATCTGTCTCGACCAGCGCCCGTGCGAGAACGGTGCGCTCTGCCAGACGCATGCG 523
consensus_9358#1 ACTAACTGCCCGCTGTAATGGTCTTCATTTCTATACACTAAGTGCTTTCGATATGTTAAA 715
consensus_9358#2 ACTAACTGCCCGCTGTAATGG--------------------------------------- 603
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GGCGGCCAGAACTATACCTGCACCTGCGAGCCCGGCTATCTGGGCCAGCGGTGCGAAACC 583
consensus_9358#1 AAAAAACACGAAGATACGAGCAAAACAGATAGGAGAGATTAAATCAAACGATGTTGAACA 775
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 CAGTACACGGACATCGTCGCGTCCCGGTTCAGCGGCAACGGCTTCATCGAGGTCAGCCCG 643
consensus_9358#1 TAATGTAGCCCTT----------------------------------------------- 788
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 AAGGCGTTCAAGCACAGCGAAAGCCAGATCACGACCGAGTTCGCGATCATGTTCAGCGCG 703
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 TACGAGCCGAACGGGCTGCTGATCTGGTACGGCCAGCGCAACGGTGAGGAGTTCCTCGGC 763
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 AACGATTACGTCGCGCTGTCGCTGTCGAACGGCTACGTCGAGCTTACGATCCGCATGGAC 823
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GGGCAGGAGTCGTACGTGCGCAACAGCGATGTGTACGTGGTCGACAACGAGCGGCACGTG 883
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GCGCTGGTCCGGCGGGAGCGCAACCAGTTCCATCTGCAGGTCGATTCGCTGACGGTGCAC 943
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GGTGAAACGCGCCCGACCGGCAAGCAGACGATGGAAATACCCGGCAGCTTCTACGTCGGC 1003
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GGTGTTCCGGACGTCGAACGCGTTACCGGCAATCGGTTCAACGAGAGCTTCAACGGGTGC 1063
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GTCTTCTCTGTGGAGAACAATGAGGGCAAGGCGATCTTACTGCGCGACTTTACCATCCGA 1123
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 ACCGTCAACGTGGACGTGTGCGACGAACCCAATCTAGGAACGGATCCACCAGTGGTGTAA 1183
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 AAACAGAAAAAAAAACATACAAAATAAACCACCCAATACTTCCAACGAGCGGAGGGAGGA 1243
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GGAGGCCGCAGGAGCTTCTCGCTATGGGGCCACCAACGAAACAGCGGTACCCACCTTCAC 1303
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 CCAACAAAAGGATGAACCGCTCTAGAGGGTGATGTAAGTCGAGTGACAAAATAACCAACT 1363
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 GCTCGGCTGGTTAAAGGAGGGAGTTGAAGAGTTAAGCAGGACTAAAATGAACAGAAAAAT 1423
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 AACATATAAAAAAATACTAAAACTGTATCGTATACCTATAGAGAAGCGCAAACGAATGCA 1483
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 CAGTGAAGAGAGGAAGCAAAAAAAAAAAAACACGCGTACAGTAACGAACAACGAATGTGC 1543
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 CAAATAAATGTAGTATTTATGTAAAAAAAAGGAACAAAAATTAAATAACGAAAAGCGCAC 1603
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ------------------------------------------------------------
consensus_9358#4 ------------------------------------------------------------
consensus_9358#0 AGTCAACGCTCAAATTCACGCGCTGAGAACAAGACAGCCATATTTGTTTGTTTAACACCA 1663
consensus_9358#1 ------------------------------------------------------------
consensus_9358#2 ------------------------------------------------------------
consensus_9358#3 ---------------
consensus_9358#4 ---------------
consensus_9358#0 CCACATTGGTCAATG 1678
consensus_9358#1 ---------------
consensus_9358#2 ---------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||