cluster # 9361

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Anopheles gambiae
cluster # 9361 cluster # 9361 Sequences # 16 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9361#0 length = 842 sequences # 9

consensus_9361#1 length = 654 sequences # 5
consensus_9361#2 length = 589 sequences # 2

consensusID : consensus_9361#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 842
fasta sequence

                              [CCGCCCACGCGTCCGCCCACGCGTCCGTTCATCT-CGT-TCGCATTAAACTAT-CTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA---AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTT-CTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTC-CGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTC-GTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTA-CCCGG-AGGAAATGATCCAGACCGGTATCTCCGCCATCGACGTGATGAACTCGATCGCCCGTGGTCAGAAGATTCCGATCTTCTCGGCTGCCGGTCTGCCGCACAATGAAATTGCCGCCCAGATCTGTCGCCAGGCCGGTCTGGTGAAGCAAACGGGTAAGTCGGTGCTGGACGAGCACGANGACAACTTCGCCATCGTGTTCGCCGCCATGGGTGTGAACATGGAGACGGNCT]

[+] EMBL BM627539             [CCGCCCACGCGTCCGCCCACGCGTCCGTTCATCT CGT TCGCATTAAACTAT CTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTT CTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTC CGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTC GTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTACCCCGGAAGGAAATGATCCAGA                                                                                                                                                                                                                     ]
[+] EMBL BM577961             [                        CCGTTCATCT CGT TCGCATTAAACTAT CTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGAAGCAGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTT CTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTCTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTC CGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTC GTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGTGTGTTCAACGGTTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTA CCCGG AGGAAATGATCCAGACCGGTATCTCCGCCATCGACGTGATGAACTCGATCGCCCGTGGTCAGAAGATTCCGATCTTCTCGGCTGCCGGTCTGCCGCAC                                                                                                                                  ]
[+] EMBL BX619390             [                             CATCTACGTAACGCATAAAACTATNCTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTNNTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTAGGATGAGGTGAAGTCCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTCACGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTCNGTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGANCACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCNCGTGTCGGAGGACATGTAGGGCCGCGTGTNCAACGGCTCCGGCAAGCACATCGACAAGGGCCCGCCAATACTGGCCGAAGATNTACTCGACATACAGGGTCAAC                                                                                                                                                                                                                                                                    ]
[+] EMBL BM591182             [                           ccgATCT CGT TCGCATTAAACTAT CTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTT CTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTC CGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTC GTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTA CCCGG AGGAAATGATCCAGACCGGT                                                                                                                                                                                                                ]
[+] EMBL BM649085             [                           ccgATCT CGT TCGCATTAAACTAT CTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTT CTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTC CGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTC GTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTA CCCGG AGGAAATGATCCAGACCGGTATCTCCGCCATCGACGTGATGAACTCGATCGCCCGTGGTCAGAAGATTCCGAT                                                                                                                                                           ]
[+] EMBL BX623799             [                                                ACTAT CTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTT CTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTC CGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTC GTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTA CCCGG AGGAAATGATCCAGACCGGTATCTCCGCCATCGACGTGATGAACTCGATCGCCCGTGGTCAGAAGATTCCGATCTTCTCGGCTGCCGGTCTGCCGCACAATGAAATTGCCGCCCAGATCTGTCGCCAGGCCGGTCTGGTGAAGCAAACGGGTAAGTCGGTGCTGGACGAGCACGANGACAACTTCGCCATCGTGTTCGCCGCCATGGGTGTGAACATGGAGACGGNCT]
[+] EMBL BX628639             [                                                  TAT CTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTT CTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTC CGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTC GTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTA CCCGG ANGAAATGATCCAGANCGGTATCTCCGCCATCGACGTGAT                                                                                                                                                                                            ]
[+] EMBL BM595140             [                                                       ccgGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTT CTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTC CGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTC GTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTA CCCGG AGGAAATGATCCAGACCGGTATCTCCGCCATCGACGTGATGAACTCGATCGCCCGTGGTCAGAAGATTCCGATCTTCTCGGCTGCCGGTCTGCCGCA                                                                                                                                   ]
[+] EMBL BM650889             [                                                                   ccgCTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTT CTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTCTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTC CGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTC GTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTA CCCGG AGGAAATGATCCAGACCGGTATCTCCGCCATCGACGTGATGAACTCGATCGCCCGTGGTCAGAAGATTCCGATCTTCTCGGCTGCCGGTCTGCCGCACAATGAAATTGCCGCCCAGATCTGTCGCCAGGCCGG                                                                                               ]




>consensus_9361#0
CCGCCCACGCGTCCGCCCACGCGTCCGTTCATCTCGTTCGCATTAAACTATCTGTGCTGC
GGTTGAACTCAATCAGTAGTGTTCGTTGAAGCAGCAGCATCATTGCATACAGCTAATCGG
TAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCT
GTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCAGTTTCGCGTGATTTCATCTCCCA
GCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGA
GGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTCCG
CTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTCGTCCAGGTGTTCGAAGGTAC
GTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCC
CGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGG
CCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTC
GCGTATCTACCCGGAGGAAATGATCCAGACCGGTATCTCCGCCATCGACGTGATGAACTC
GATCGCCCGTGGTCAGAAGATTCCGATCTTCTCGGCTGCCGGTCTGCCGCACAATGAAAT
TGCCGCCCAGATCTGTCGCCAGGCCGGTCTGGTGAAGCAAACGGGTAAGTCGGTGCTGGA
CGAGCACGANGACAACTTCGCCATCGTGTTCGCCGCCATGGGTGTGAACATGGAGACGGN
CT

consensusID : consensus_9361#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 654
fasta sequence

                              [GACCCACGCGTCCGCGGACGCGTGGGTCGCATTCGTGTTCGTCGCCGTCGTTCATCTCGTTCGCATTAAACTATCTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA---AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTCTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTCCGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTCGTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTACCCGGAGGAAATGATCCAGAC]

[+] EMBL BM654043             [GACCCACGCGTCCGCGGACGCGTGGGTCGCATTCGTGTTCGTCGCCGTCGTTCATCTCGTTCGCATTAAACTATCTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTT TGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTCTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTCCGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTCGTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCCGCCAATTCTGGCCG                                                                         ]
[+] EMBL BM585581             [                           ccgATTCGTGTTCGTCGCCGTCGTTCATCTCGTTCGCATTAAACTATCTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAATGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGTCCACAAGGAACACGTTCTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGACGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTCCGCTCCGGTCAGG                                                                                                                                                                                                                                                                    ]
[+] EMBL BM580142             [                                 ccgGTTCGTCGCCGTCGTTCATCTCGTTCGCATTAAACTATCTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGAAGCAGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCACTTGAGCGATGGCACCGTCCGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTCTTCCAGGTGTTCTAAGCTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGG CCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTACCCGGAGGAAATGATCCAGAC]
[+] EMBL BM654594             [                                           ccgGTCGTTCATCTCGTTCGCATTAAACTATCTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGA   AGCAGCAGCATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGGAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTCTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTCC                                                                                                                                                                                                                                                                                ]
[+] EMBL BM642310             [                                                                                                                                                                                              TGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTCTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAACGATGGCACCGTCCGCTCCGGTCACGTGCTGGAAGTGAGCGGCTCGAAGGACGTCGTCCAGGTGTTCGAAGGTACGTCCGGTATCAATGCCAAGAACACG                                                                                                                                                                                          ]




>consensus_9361#1
GACCCACGCGTCCGCGGACGCGTGGGTCGCATTCGTGTTCGTCGCCGTCGTTCATCTCGT
TCGCATTAAACTATCTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGAAGCAGCAG
CATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATG
TCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCA
GTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAAC
GGACCGCTGGTCATTCTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTG
CGCTTGAGCGATGGCACCGTCCGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCC
GTCGTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTC
ACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGC
TCCGGCAAGCCCATCGACAAGGGCCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCA
GGGTCAACCGATCAACCCGTGGTCGCGTATCTACCCGGAGGAAATGATCCAGAC

consensusID : consensus_9361#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 589
fasta sequence

                              [CCGCCCACGCGTCCGGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTCCGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTCGTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTACCCGGAGGAAATGATCCAGACCGGTATCTCCGCCATCGACGTGATGAACTCGATCGCCCGTGGTCAGAAGATTCCGATCTTCTCGGCTGCCGGTCTGCCGCACAATGAAA]

[+] EMBL BM654171             [CCGCCCACGCGTCCGGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTCCGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTCGTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTACCCGGAGGAAATGATCCAGACCGGTATCTCCGCCATCGACGTGATGAACTCGATCGCCCGTGGTCAGAAGATTCCGATCTTCTCGGCTGCCGGTCTGCCGCACAATGAAA]
[+] EMBL AGA285711            [                                       AATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTCCGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCCGTCGTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATTCTGGCCGAAGATTTCCTCGATATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTACCCGGA                                                                                                        ]




>consensus_9361#2
CCGCCCACGCGTCCGGGAGCAACGATGTCGACGATGTACAATAAGACCCTGTCGGCCCAC
CAGGCCCACAAGGAACACGTTCTGGCAGTTTCGCGTGATTTCATCTCCCAGCCGCGCTTG
ATCTACAAAACCGTGTCCGGTGTAAACGGACCGCTGGTCATTTTGGATGAGGTGAAGTTC
CCGAAGTTTGCCGAAATCGTGCAGCTGCGCTTGAGCGATGGCACCGTCCGCTCCGGTCAG
GTGCTGGAAGTGAGCGGCTCGAAGGCCGTCGTCCAGGTGTTCGAAGGTACGTCCGGTATC
GATGCCAAGAACACGGTGTGCGAGTTCACCGGCGACATTCTGCGTACGCCCGTGTCGGAG
GACATGTTGGGCCGCGTGTTCAACGGCTCCGGCAAGCCCATCGACAAGGGCCCGCCAATT
CTGGCCGAAGATTTCCTCGACATTCAGGGTCAACCGATCAACCCGTGGTCGCGTATCTAC
CCGGAGGAAATGATCCAGACCGGTATCTCCGCCATCGACGTGATGAACTCGATCGCCCGT
GGTCAGAAGATTCCGATCTTCTCGGCTGCCGGTCTGCCGCACAATGAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9361#0      -----------------------CCGCCCACGCGTCCGCCCACGCGTCCGTTCATCTCGT 37
consensus_9361#2      ------------------------------------------------------------
consensus_9361#1      GACCCACGCGTCCGCGGACGCGTGGGTCGCATTCGTGTTCGTCGCCGTCGTTCATCTCGT 60
                                                                                  

consensus_9361#0      TCGCATTAAACTATCTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGAAGCAGCAG 97
consensus_9361#2      ------------------------------------------------------------
consensus_9361#1      TCGCATTAAACTATCTGTGCTGCGGTTGAACTCAATCAGTAGTGTTCGTTGAAGCAGCAG 120
                                                                                  

consensus_9361#0      CATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATG 157
consensus_9361#2      --------------------------------CCGCCCACGCGTCCG-GGAGCAACGATG 27
consensus_9361#1      CATCATTGCATACAGCTAATCGGTAGCAGCAGAAGGCTATACGGCGAAGGAGCAACGATG 180
                                                        * * *  ** *   ************

consensus_9361#0      TCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCA 217
consensus_9361#2      TCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCA 87
consensus_9361#1      TCGACGATGTACAATAAGACCCTGTCGGCCCACCAGGCCCACAAGGAACACGTTCTGGCA 240
                      ************************************************************

consensus_9361#0      GTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAAC 277
consensus_9361#2      GTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAAC 147
consensus_9361#1      GTTTCGCGTGATTTCATCTCCCAGCCGCGCTTGATCTACAAAACCGTGTCCGGTGTAAAC 300
                      ************************************************************

consensus_9361#0      GGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTG 337
consensus_9361#2      GGACCGCTGGTCATTTTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTG 207
consensus_9361#1      GGACCGCTGGTCATTCTGGATGAGGTGAAGTTCCCGAAGTTTGCCGAAATCGTGCAGCTG 360
                      *************** ********************************************

consensus_9361#0      CGCTTGAGCGATGGCACCGTCCGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCC 397
consensus_9361#2      CGCTTGAGCGATGGCACCGTCCGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCC 267
consensus_9361#1      CGCTTGAGCGATGGCACCGTCCGCTCCGGTCAGGTGCTGGAAGTGAGCGGCTCGAAGGCC 420
                      ************************************************************

consensus_9361#0      GTCGTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTC 457
consensus_9361#2      GTCGTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTC 327
consensus_9361#1      GTCGTCCAGGTGTTCGAAGGTACGTCCGGTATCGATGCCAAGAACACGGTGTGCGAGTTC 480
                      ************************************************************

consensus_9361#0      ACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGC 517
consensus_9361#2      ACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGC 387
consensus_9361#1      ACCGGCGACATTCTGCGTACGCCCGTGTCGGAGGACATGTTGGGCCGCGTGTTCAACGGC 540
                      ************************************************************

consensus_9361#0      TCCGGCAAGCCCATCGACAAGGGCCC-GCCAATTCTGGCCGAAGATTTCCTCGACATTCA 576
consensus_9361#2      TCCGGCAAGCCCATCGACAAGGGCCC-GCCAATTCTGGCCGAAGATTTCCTCGACATTCA 446
consensus_9361#1      TCCGGCAAGCCCATCGACAAGGGCCCCGCCAATTCTGGCCGAAGATTTCCTCGACATTCA 600
                      ************************** *********************************

consensus_9361#0      GGGTCAACCGATCAACCCGTGGTCGCGTATCTACCCGGAGGAAATGATCCAGACCGGTAT 636
consensus_9361#2      GGGTCAACCGATCAACCCGTGGTCGCGTATCTACCCGGAGGAAATGATCCAGACCGGTAT 506
consensus_9361#1      GGGTCAACCGATCAACCCGTGGTCGCGTATCTACCCGGAGGAAATGATCCAGAC------ 654
                      ******************************************************      

consensus_9361#0      CTCCGCCATCGACGTGATGAACTCGATCGCCCGTGGTCAGAAGATTCCGATCTTCTCGGC 696
consensus_9361#2      CTCCGCCATCGACGTGATGAACTCGATCGCCCGTGGTCAGAAGATTCCGATCTTCTCGGC 566
consensus_9361#1      ------------------------------------------------------------
                                                                                  

consensus_9361#0      TGCCGGTCTGCCGCACAATGAAATTGCCGCCCAGATCTGTCGCCAGGCCGGTCTGGTGAA 756
consensus_9361#2      TGCCGGTCTGCCGCACAATGAAA------------------------------------- 589
consensus_9361#1      ------------------------------------------------------------
                                                                                  

consensus_9361#0      GCAAACGGGTAAGTCGGTGCTGGACGAGCACGANGACAACTTCGCCATCGTGTTCGCCGC 816
consensus_9361#2      ------------------------------------------------------------
consensus_9361#1      ------------------------------------------------------------
                                                                                  

consensus_9361#0      CATGGGTGTGAACATGGAGACGGNCT 842
consensus_9361#2      --------------------------
consensus_9361#1      --------------------------