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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9368#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1416 fasta sequence
[CAGATCGCCCCAGGTTTCTTCGTGCAAAAAAAAGAATATTCCTATTTAACTAAACAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGAAAGCGATGTGTCAAAGATGAAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTG-GACGACGATCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG-CACTGGAGCGGTTGGA-GATGA-GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTAC---CAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACA-TCCGCCGGCAACAGTACGCCGGCTTCGCT-GGAAGCGC-TGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGCAACGGCCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGCGACTCAGGTTGGAGCGGTTCAAATCAGCCGCTTAATTGCGGACGGACAAATGTAGGTTTCCTTTTACCCGATTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGCTACTCCGGTCTCCTGAGAGCGACGAAGAGCGCCATCTCGTGTGTACGAAGAAAGGGGACACGTTAGTGGGCTGAGTGTAGAATAAGACAACTCAATGATGTGTAGCGATCATTGGCGGCAATTGGACGATAATGTGTTTTTATTTTGCAAATCAACTTAAAATAAACATACTAAATCACGTATATACGAT]
[+] EMBL AL693576 [CAGATCGCCCCAGGTTTCTTCGTGCAAAAAAAAGAATATTCCTATTTAACTAAACAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGAAAGCGATGTGTCAAAGATGAAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTG GACGACGATCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGG CGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGACGATGA GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGA CANTAC CAGCAGCAGCAGCAGCGCTACCG AACCGATACTCCTGCCG TAGCTCCGG A CGCGGCAACGGATAAAATGCAGGCGCGTGCGG ]
[+] EMBL BM612666 [ ccgTTCCTATTTAACTAAACAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGAAAGCGATGTGTCAAAGATGAAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGATACGGCCAACTCGGAGGACCTGCTG GACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAACTGACCGCCACTGGAGCGGTTGGA GATGAGGGGCCAAAAAGTTCGGTTCG ]
[+] EMBL BM614636 [ CCGATTTAACTAAACAAACTATTGTAACAATAAACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAACCAGTATCAGCAAAACTCAATCACGATGAGCGAAACCGATGTGTCAAAGATGAAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTG GACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAACCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACGTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAG ]
[+] EMBL BM579648 [ ccgcatttTGTAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGTGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTG GACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAACCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACGTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGA GATGA GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCG ]
[+] EMBL BX626098 [ GCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTGNGACGACGATCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGA GATGA GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTAC CAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACATTCCGCCGGCAACAGTACGCCGGCTTCGCTGGGAAGCGCTTGAAAAAGCGTGCCna ]
[+] EMBL BX622584 [ GTCGGTGGCGATGTGCTGGAAGATACGGCCAACTCGGAGGACCTGCTG GACGACGATCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGA GATGA GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTAC CAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACA TCCGCCGGCAACAGTACGCCGGCTTCGCT GGAAGCGC TGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAAT ]
[+] EMBL BX618474 [ CGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGA GATGA GGGCC AAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTAC CAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACA TCCGCCGGCAACAGTACGCCGGCTTCGCT GGAAGCGC TGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGCAACGGCCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTA ]
[+] EMBL BX615362 [ ACAGTGGCAGCGATGGCGAGCCGGATAAGAAAGTCGTCAAGCTCGGTCAGCTGACCG CACTGGAGCGGTTGGA GATGA GGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTAC CAGCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACA TCCGCCGGCAACAGTACGCCGGCTTCGCT GGAAGCGC TGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGCAACGGCCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGCGACTCAGGTTGGAGCGGTTCAAATCAGCCGCTTAATTGCGGACGGACAAATGTAGGTTTCCTTTTACCCGATTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGCTACTCCGGTCTCCTGAGAGCGACGAAGAGCGCCATCTCGTGTGTACGAAG ]
[+] EMBL BX621391 [ TTGACCAGCGCCAGCAGCATCACA TCCGCCGGCAACAGTACGCCGGCTTCGCT GGAAGCGC TGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGCAACGGCCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGCGACTCAGGTTGGAGCGGTTCAAATCAGCCGCTTAATTGCGGACGGACAAATGTAGGTTTCCTTTTACCCGATTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGCTACTCCGGTCTCCTGAGAGCGACGAAGAGCGCCATCTCGTGTGTACGAAGAAAGGGGACACGTTAGTGGGCTGAGTGTAGAATAAGACAACTCAATGATGTGTAGCGATCATTGGCGGCAATTGGACGATAATGTGTTTTTATTTTGCAAATCAACTTAAAATAAACATACTAAATCACGTAT ]
[+] EMBL BM600603 [ ccgGTGGGCTGAGTGTAGAATAAGACAACTCAATGATGTGTAGCGATCATTGGCGGCAATTGGACGATAATGTGTTTTTATTTTGCAAATCAACTTAAAATAAACATACTAAATCACGTATATACGAT]
consensusID : consensus_9368#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 906 fasta sequence
[TCCCCGCAGGTTATAGCGTAGAGATTTCTCTTCGTGCAAAAAAAAAGAATATTCCTATTTAACTAAACAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGCAAAGCGATGTGTCCAAAGCATGCACNGTGTTGCCTGATCTTGCACACACAACAGAGCTCAAAGTGCGCGTGGTATTGAGCGTGCATGGGCCAACAAGAACGAGCTCANTGGATCGATTACAACACAGCCACTGCTGGTCAGGTGGCGATTGTTGCTTGGAAGCATACGGCCAACTCGGAGGACCTGCTGGACGACGATCTTGAACCGACAGATCTAGNCTGGACGAGGACANAAGATCTCACCGATACCTGGTGGTGGAAGGAAAGGACCACATTACTTGAACTACGACCGACCGCCGAGCGCATACAGCGTAACATCGATATNCAACCCGGATGAGCCGCGGAANAGCCGGAAGACGAAACCGACCGAAACACGGGGAGGACAAAGGTCACAGACGCTCCAGGCCGCGCGTACAGATATCCCTGACAGGCGAAAGATATATCNCATTAACCNAAAAGCCCCAAACACNCTTNGNCCGCCGAGACAAAACAGGACACCGGACGGCGAACAGACGGCACGGCGAACCCGGAANACAAGGCAACCACGGAGAAACAGCCCGGAGACNCCTNCACCCGAGGTTCCAAATACGCGGCCAGGGTGGCCCAGCGCAACACGGTGGGGACNGGCGNATGGGACGCACACCCGGGGAACAAACAGCAAAGNCGACAAACANACTATCCGGGTCACAGNCTATNGNACCGCGACACTAGGACAGACGCGATTCTGGGAGACA]
[+] EMBL AL693133 [TCCCCGCAGGTTATAGCGTAGAGATTTCTCTTCGTGCAAAAAAAAAGAATATTCCTATTTAACTAAACAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCTCGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGCAAAGCGATGTGTCCAAAGCATGCACNGTGTTGCCTGATCTTGCACACACAACAGAGCTCAAAGTGCGCGTGGTATTGAGCGTGCATGGGCCAACAAGAACGAGCTCANTGGATCGATTACAACACAGCCACTGCTGGTCAGGTGGCGATTGTTGCTTGGAAGCATACGGCCAACTCGGAGGACCTGCTGGACGACGATCTTGAACCGACAGATCTAGNCTGGACGAGGACANAAGATCTCACCGATACCTGGTGGTGGAAGGAAAGGACCACATTACTTGAACTACGACCGACCGCCGAGCGCATACAGCGTAACATCGATATNCAACCCGGATGAGCCGCGGAANAGCCGGAAGACGAAACCGACCGAAACACGGGGAGGACAAAGGTCACAGACGCTCCAGGCCGCGCGTACAGATATCCCTGACAGGCGAAAGATATATCNCATTAACCNAAAAGCCCCAAACACNCTTNGNCCGCCGAGACAAAACAGGACACCGGACGGCGAACAGACGGCACGGCGAACCCGGAANACAAGGCAACCACGGAGAAACAGCCCGGAGACNCCTNCACCCGAGGTTCCAAATACGCGGCCAGGGTGGCCCAGCGCAACACGGTGGGGACNGGCGNATGGGACGCACACCCGGGGAACAAACAGCAAAGNCGACAAACANACTATCCGGGTCACAGNCTATNGNACCGCGACACTAGGACAGACGCGATTCTGGGAGACA]
consensusID : consensus_9368#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 774 fasta sequence
[CAGAATCGGCACGAGGTGACGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGGTTGGAGATNAGGGCCAAAAAGTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAAGCAGCAGCGCTACCGCAAACCGATACTCCTGCCGCTTAGCTCCGGCACCGCGGCAAACGGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGGCATCACATCCGCCGGCAAACAGGTACGCCCGGGCTTCGCTGGAAGGCGCTGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGGCAACGGCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGCGACTCAGGTTGGAGCGGTTCAAAGTCAGCCGCTTAAGTTGCGGACGGACAAATGTAGGTTTCCGTTTTACCCGAGTTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGGCTACTCCGGTCTCCTGAGAGCGACGAAAGAGGCGCCATCTCGTGTGTACGAAGAAAGGGGACACCGTAAGTTGGGCTTAGTTGTAGAA]
[+] EMBL BX468653 [CAGAATCGGCACGAGGTGACGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGGTTGGAGATNAGGGCCAAAAAGTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAAGCAGCAGCGCTACCGCAAACCGATACTCCTGCCGCTTAGCTCCGGCACCGCGGCAAACGGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGGCATCACATCCGCCGGCAAACAGGTACGCCCGGGCTTCGCTGGAAGGCGCTGAAAAAGCGTGCCGAGCGTTTCGGTGGCTCCGTCTCATCCGAAATGAGCAAACTCGAGCAGGAGGAAAAGCTGGCCAAGCGGCAAGCTCGCTTCGGGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGGCAACGGCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGCGACTCAGGTTGGAGCGGTTCAAAGTCAGCCGCTTAAGTTGCGGACGGACAAATGTAGGTTTCCGTTTTACCCGAGTTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGGCTACTCCGGTCTCCTGAGAGCGACGAAAGAGGCGCCATCTCGTGTGTACGAAGAAAGGGGACACCGTAAGTTGGGCTTAGTTGTAGAA]
consensusID : consensus_9368#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 745 fasta sequence
[CCGAGCCAAGCGCACTGAGACACACGGACCGTTCCGGTAACACACATTCTTTCCCACGTTGTTTTCCTCATTTTGTAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGATACGGCCAACTCGGAGGACCTGCTGGACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAACTGACCGCACTGGAGCGGTTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGG]
[+] EMBL BM616401 [CCGAGCCAAGCGCACTGAGACACACGGACCGTTCCGGTAACACACATTCTTTCCCACGTTGTTTTCCTCATTTTGTAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGATACGGCCAACTCGGAGGACCTGCTGGACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGT ]
[+] EMBL BM577994 [ ccgACATTCTTTCCCACGTTGTTTTCCTCATTTTGTAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGATACGGCCAACTCGGAGGACCTGCTGGACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAACTGACCGCACTGGAGCGGTTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCA ]
[+] EMBL BM586990 [ ccgCTTTCCCACGTTGTTTTCCTCATTTTGTAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGAACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGATACGGCCAACTCGGAGGACCTGCTGGACGACGACCTGAACGACGATCTGCTGGACGAGGACAAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCGATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAACTGACCGCACTGGAGCGGTTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAGCAGCGCTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGG]
consensusID : consensus_9368#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 513 fasta sequence
[ATCGGCCGAGCTGATTTCACGGATGAGCCGCGAAAACGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGGTTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAGCAGCAGCACTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACATCCGCCGGCAACAGTACGCCGGCTTCGCTGGAAGCGCTGAAAAAGCGTGC]
[+] EMBL AL934956 [ATCGGCCGAGCTGATTTCACGGATGAGCCGCGAAAACGGAAGACGAACCGACCGAAACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATTTCCATTACCAAGCCCACACTTGCGCCGGAAACGACCGTCGGCAGCGAGGCACCGAAAGCACAGCGACAGCCGTTCTCTTGGCCCAATCGGCCGGTGCCAGCAACAGTGGCAGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGGTTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGCAGCAGCAGCAGCACTACCGCAACCGATACTCCTGCCGCTAGCTCCGGCACCGCGGCAACGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGCATCACATCCGCCGGCAACAGTACGCCGGCTTCGCTGGAAGCGCTGAAAAAGCGTGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9368#0 CAGATCGCCCCAGGTTTCTTCGTGCAAAAAAAAGAATATTCCTATTTAACTAAACAAACT 60
consensus_9368#2 ------------------------------------------------------------
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ------------------------------------------------------------
consensus_9368#1 ------------------------------------------------------------
consensus_9368#0 ATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCTTCTTCT 120
consensus_9368#2 ------------------------------------------------------------
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ---------------------------------------------CCGAGCCAAGCGCAC 15
consensus_9368#1 ------------------------------------------------------------
consensus_9368#0 CGGCTAAGCAGTATCAGCAAAACTCAATCACGATGAGCGAAAGCGATGTGTCAAAGATGA 180
consensus_9368#2 ------------------------------------------------------------
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 TGAGACACACGGACCGTTCCGGTAACACACATTCTTTCCCACGTTGTTTTCCTCATTTTG 75
consensus_9368#1 ------------------------------------------------------------
consensus_9368#0 AGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAGA 240
consensus_9368#2 ------------------------------------------------------------
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 TAGGTTGCCGATCTGAAAAAAGAGCTAAAGGCGCGTGGTTTGAGCGTGATGGGCAACAAG 135
consensus_9368#1 ------------------------------------------------------------
consensus_9368#0 ACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGCTGGAAGATA 300
consensus_9368#2 ------------------------------------------------------------
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 AACGAGCTAGTGGATCGATTACAAACAGCACTGCTGGTCGGTGGCGATGTGTTGGAAGAT 195
consensus_9368#1 ------------------------------------------------------------
consensus_9368#0 CGGCCAACTCGGAGGACCTGCTGGACGACGATCTGAACGACGATCTGCTGGACGAGGACA 360
consensus_9368#2 ------------------------------------------------------------
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ACGGCCAACTCGGAGGACCTGCTGGACGACGACCTGAACGACGATCTGCTGGACGAGGAC 255
consensus_9368#1 ------------------------------------------------------------
consensus_9368#0 AAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGCG 420
consensus_9368#2 ------------------------------------------------------------
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 AAAGATCTCACCGATCCGGTGGTGGAGGAAGACCACATACTGAACTCGCCGACGCCGAGC 315
consensus_9368#1 -----------------------------------------------------TCCCCGC 7
consensus_9368#0 ATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCC-GGAAGACGAACCGACCGAA 479
consensus_9368#2 ------------------------------------------------------------
consensus_9368#4 ---ATCGGCCGAGCTGATTTCACGGATGAGCCGCGAAAAC-GGAAGACGAACCGACCGAA 56
consensus_9368#3 GATACGCGTAAATCGATTTCACCGGATGAGCCGCGAAAGCCGGAAGACGAACCGACCGAA 375
consensus_9368#1 AGGTTATAGCGTAGAGATTTCTCTTCGTGCAAAAAAAAAGAATATTCCTATTTAACTAAA 67
consensus_9368#0 ACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATT 539
consensus_9368#2 ------------------------------------------------------------
consensus_9368#4 ACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCCCTGAAGCGAAACATT 116
consensus_9368#3 ACGGCGGAGGAAAAGTCAAGCGCTCCAGCCGCGCGTAAGATATCGCTGAAGCGAAACATT 435
consensus_9368#1 CAAACTATTGTAACAATAGACGCATACACAGCCAACGCGGTGCTCCCGGTCAACGATCCT 127
consensus_9368#0 TCCATTACCAAGCCCACACTTGCGCCGGA---AACGACCGTCGGC----AGCGAGGCACC 592
consensus_9368#2 --------------CAGAATCG-GCACGA---GGTGAC-GTCGGC----AGCGAGGCACC 37
consensus_9368#4 TCCATTACCAAGCCCACACTTGCGCCGGA---AACGACCGTCGGC----AGCGAGGCACC 169
consensus_9368#3 TCCATTACCAAGCCCACACTTGCGCCGGA---AACGACCGTCGGC----AGCGAGGCACC 488
consensus_9368#1 TCTTCTCGGCTAAGCAGTATCA-GCAAAACTCAATCACGATGAGCGCAAAGCGATGTGTC 186
** * ** * ** * ** ***** * *
consensus_9368#0 GAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCA--GCAACAGTGGC 650
consensus_9368#2 GAAAGCACAGCGACAGCCGTTTTCTTCGGCTCAATCGGCCGGTGCCA--GCAACAGTGGC 95
consensus_9368#4 GAAAGCACAGCGACAGCCGTTCTCTT-GGCCCAATCGGCCGGTGCCA--GCAACAGTGGC 226
consensus_9368#3 GAAAGCACAGCGACAGCCGTTCTCTTCGGCCCAATCGGCCGGTGCCA--GCAACAGTGGC 546
consensus_9368#1 CAAAGCATGCACNGTGTTGCCTGATCTTGCACACACAACAGAGCTCAAAGTGCGCGTGGT 246
****** * * * ** ** * * * ** * ****
consensus_9368#0 AGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGG 710
consensus_9368#2 AGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGG 155
consensus_9368#4 AGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAGCTGACCGCACTGGAGCGG 286
consensus_9368#3 AGCGATGGCGAGCCGGAAAAGAAAGTCGTCAAGCTCGGTCAACTGACCGCACTGGAGCGG 606
consensus_9368#1 ATTGAGCGTGCATGGGCCAACAAGAACG---AGCTCANTGGATCGATTACAACACAGCCA 303
* ** * * ** ** ** ** ***** * ** ** ***
consensus_9368#0 TTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGC 770
consensus_9368#2 TTGGAGATNAGGGCCAAAAAGT-CGGTTCGGCACAAACAGGCACACCGACCACTACCAGC 214
consensus_9368#4 TTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGC 346
consensus_9368#3 TTGGAGATGAGGGCCAAAAAGTTCGGTTCGGCACAAACAGGCACACCGACCACTACCAGC 666
consensus_9368#1 CTGCTGGTCAGGTGGCGATTGT-TGCTTGGAAGCATACGGCCAACTCGG--AGGACCTGC 360
** * * *** * ** * ** * ** ** * ** ** * *** **
consensus_9368#0 AGCA-GCAGCAGCGCTACCGCAA-CCGATACTCCTGCCGCT-AGCTCCGGCACCGCGGCA 827
consensus_9368#2 AGCAAGCAGCAGCGCTACCGCAAACCGATACTCCTGCCGCTTAGCTCCGGCACCGCGGCA 274
consensus_9368#4 AGCA-GCAGCAGCACTACCGCAA-CCGATACTCCTGCCGCT-AGCTCCGGCACCGCGGCA 403
consensus_9368#3 AGCA----GCAGCGCTACCGCAA-CCGATACTCCTGCCGCT-AGCTCCGGCACCGCGGCA 720
consensus_9368#1 TGGA--CGACGATCTTGAACCGA-CAGATCTAGNCTGGACGAGGACANAAGATCTCACCG 417
* * * * * * * *** * * * * * *
consensus_9368#0 AC--GGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAG-CATC 884
consensus_9368#2 AACGGGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAGGCATC 334
consensus_9368#4 AC--GGATAAAATGCAGGCGCGTGCGGCAAGATTTGGTTTGACCAGCGCCAGCAG-CATC 460
consensus_9368#3 AC--GGATAAAATGCAGGCGCGTGCGG--------------------------------- 745
consensus_9368#1 ATACCTGGTGGTGGAAGGAAAGGACCACATTACTTGAACT-ACGACCGACCGCCGAGCGC 476
* * *** * *
consensus_9368#0 ACATCCGCCGGCAAC--AGTACGCC--GGCTTCGCTG-GAAG-CGCTGAAAAAGCGTGCC 938
consensus_9368#2 ACATCCGCCGGCAAACAGGTACGCCCGGGCTTCGCTG-GAAGGCGCTGAAAAAGCGTGCC 393
consensus_9368#4 ACATCCGCCGGCAAC--AGTACGCC--GGCTTCGCTG-GAAG-CGCTGAAAAAGCGTGC- 513
consensus_9368#3 ------------------------------------------------------------
consensus_9368#1 ATACAGCGTAACATCGATATNCAACCCGGATGAGCCGCGGAANAGCCGGAAGACGAAACC 536
consensus_9368#0 GAGCGTTTCGGTGGCTCCGTCTCATCCG-AAATGAGCAAACTCGAGCAGGAGGAAAAGCT 997
consensus_9368#2 GAGCGTTTCGGTGGCTCCGTCTCATCCG-AAATGAGCAAACTCGAGCAGGAGGAAAAGCT 452
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ------------------------------------------------------------
consensus_9368#1 GACCGAAACACGGGGAGGACAAAGGTCACAGACGCTCCAGGCCGCGCGTACAGATATCCC 596
consensus_9368#0 GGCCAAGCGGCAAGCTCGCTTCG--G-CTTGGCGGCTAGCAGCAGTCCGGCCCCATCGG- 1053
consensus_9368#2 GGCCAAGCGGCAAGCTCGCTTCG--GGCTTGGCGGCTAGCAGCAGTCCGGCCCCATCGGG 510
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ------------------------------------------------------------
consensus_9368#1 TGACAGGCGAAAGATATATCNCATTAACCNAAAAGCCCCAAACACNCTTNGNCCGCCGAG 656
consensus_9368#0 CAACGGCCAACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGC 1113
consensus_9368#2 CAACGGC-AACGGTGCCGGGAAGGTTGCCACCGGTTCGGTAGATTACGCGGAAAAAGCGC 569
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ------------------------------------------------------------
consensus_9368#1 ACAAAAC--AGGACACCGGACGGCGAACAGACGGCACGGCGAACCCGGAANACAAGGCAA 714
consensus_9368#0 GACTCAGGTTGGAGCGGTTCAAA-TCAGCCGCTTAA-TTGCGGACG---GACAAATGTAG 1168
consensus_9368#2 GACTCAGGTTGGAGCGGTTCAAAGTCAGCCGCTTAAGTTGCGGACG---GACAAATGTAG 626
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ------------------------------------------------------------
consensus_9368#1 CCACGGAGAAACAGCCCGGAGACNCCTNCACCCGAGGTTCCAAATACGCGGCCAGGGTGG 774
consensus_9368#0 GTTTCC-TTTTACCCGA-TTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTG- 1225
consensus_9368#2 GTTTCCGTTTTACCCGAGTTTTTGGTACGTTCATGCTGCTCTTCATAGCTGTATCCTTGG 686
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ------------------------------------------------------------
consensus_9368#1 CCCAGCGCAACACGGTGGGGACNGGCGNATGGGACGCACACCCGGGGAACAAACAGCAAA 834
consensus_9368#0 CTACTCCGGTCTCCTGAGAGCGACGAAGA--GCGCCATCTCGTGTGTACGAAGAAAGGGG 1283
consensus_9368#2 CTACTCCGGTCTCCTGAGAGCGACGAAAGAGGCGCCATCTCGTGTGTACGAAGAAAGGGG 746
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ------------------------------------------------------------
consensus_9368#1 GNCGACAAACANACTATCCGGGTCACAGNCTATNGNACCGCG-ACACTAGGACAGACGCG 893
consensus_9368#0 ACACGTTAG--TGGGCTGAGT-GTAGAATAAGACAACTCAATGATGTGTAGCGATCATTG 1340
consensus_9368#2 ACACCGTAAGTTGGGCTTAGTTGTAGAA-------------------------------- 774
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ------------------------------------------------------------
consensus_9368#1 ATTCTGGGAGACA----------------------------------------------- 906
consensus_9368#0 GCGGCAATTGGACGATAATGTGTTTTTATTTTGCAAATCAACTTAAAATAAACATACTAA 1400
consensus_9368#2 ------------------------------------------------------------
consensus_9368#4 ------------------------------------------------------------
consensus_9368#3 ------------------------------------------------------------
consensus_9368#1 ------------------------------------------------------------
consensus_9368#0 ATCACGTATATACGAT 1416
consensus_9368#2 ----------------
consensus_9368#4 ----------------
consensus_9368#3 ----------------
consensus_9368#1 ----------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||