These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9376#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1445 fasta sequence [CGTCCGCACACAACCGGGCGACGTTCGTCGTGCATTTTCTGCTCAATGTTTTCGTACTTCAGGCGTGCTTTAGCAATTTCCATAGATTTTCACCGTGCCACAGCACAGCTCACGCAACAGTGCGCACGGAAGCTGTGCACAGCGCCCGCAATAGACGACGGTGTGAGGCAACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGTGGGAAGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATCCAGTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCGGCGGCCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGATGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTCGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAA-TGCTTTGCCCTGTACGTGGGTACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCCGTGAAGCGGTTCATCATGTCGTTCGAGTGTGATCCACCCTTCCTGCCGGA-AGGATCAAC-GGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCATCAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGAAAGCGACATTATCGAGAAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGGCTAGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGCCACGAGACGCTCGAGTTTGAGAAGGAGGAGCCATTGATACAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTCGAGACGGAGCTGAAGACGAACTCGATGGTCGAGTGGCTGGAGAAGCTGCCGCTGCACAGCTACGAACCGAGGGACGAGAGTGAACCGAGCGAGTGGAAACCACGGAATAGGAAAGCTTCCGACGATCAGGATGACGATGACGAAT--AAACCACTGGCCTTGTTATATTGCATTAGGCAAACGCTAAAAAAAAA] [+] EMBL CNS08ZYE [CGTCCGCACACAACCGGGCGACGTTCGTCGTGCATTTTCTGCTCAATGTTTTCGTACTTCAGGCGTGCTTTAGCAATTTCCATAGATTTTCACCGTGCCACAGCACAGCTCACGCAACAGTGCGCACGGAAGCTGTGCACAGCGCCCGCAATAGACGACGGTGTGAGGCAACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGTGGGAAGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATCCAGTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCGGCGGCCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGATGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTCGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAA TGCTTTGCCCTGTACGTGGGTACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCCGTGAAGCGGTTCATCATGTCGTTCGAGTGTGATCCACCCTTCCTGCCGGA AGGATCAAC GGCAGAGTTTGCTACGATCAAAATCAAAGGACAAAGCTTCATGCTGCATCAGATACGGAAGATGGTGGGCCT ] [-] EMBL CNS08N37 [ AGGTCGTGTCGATCAAGTTTTTTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAAGTGC TTGCCCTGTACGTGGGCACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCCGTGAAGCGGTTCATCATGTCGTTCGAGTGTGATCCACCCTTCCTCCCGGACGGGGTCAACGGGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCATCAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGAAAGCGACATTATCGAGAAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGGCTAGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGCCACGAGACGCTCGAGTTTGAGAAGGAGGAGCCATTGATACAGGAGTTTTTCAAGCGCCACATTGCATCGACCATCGTCGAGACGGAGCTGAAGACGAACTCGATGGTCGAGTGGCTGGAGAAG TGCCGCTGAACAGCTACGAACCGAGGGAC ] [-] EMBL CNS08F9G [ TGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCATAAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGAAAGCGACATTATCGAGAAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGGCTTGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGCCACGAAACGCTCGAGTTTGAGAAGGAGGAGCCAATGATACAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTTGAGACGGAGCTGAAGACAAACTCGATGGTTGAGTGGCTGGAGAAGCTGCCGCTGAACAGCTACGAACCGAGGGACGAGAGTGAACCGAGCGAGTGGAAACCACGGAATAGGAAAGCTTCCGACGATCAGGATGACGATGACGAATAAAAACCACTGGCCTTGTTATATTGCATTAGGCAAACG ] [-] EMBL AGA285019 [ GCATCAGATACGGAAGATGGTGGGCCTAACCATAGCGGTCGTTCGCGACCTCGCGGAAAGCGACATTATCGAGAAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGGCTAGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGCCACGAGACGCTCGAGTTTGAGAAGGAGGAACCAATGATACAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTCGAGACGGAGCTGAAGACGAACTCGATGGTCGAGTGGCTGGAGAAGCTGCCGCTGCACAGCTACGAACCGAGGGACGAGAATGAACCGAGCGAGTGGAAACCACGGAATAGGAAAGCTTCCGACGAT ] [-] EMBL CNS09EN4 [ AAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGGCTAGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGCCACGAGACGCTCGAGTTTGAGAAGGAGGAGCCATTGAAAAAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTCGAGACGGAGCT ] [-] EMBL CNS099FB [ GAATTCACTACGACAAG ACAACAAGCGGTACGGCGAGGACGGTTGCCACGAGACGCTCGAGTTTGAGAAGGAGGAGCCATTGATACAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTCGAGACGGAGCTGAAGACGAACTCGATGGTCGAGTGGCTGGAGAAGCTGCCGCTGCACAGCTACGAACCGAGGGACGAGAGTGAACCGAGCGAGTGGAAACCACGGAATAGGAAAGCTTCCGACGATCAGGATGACGATGACGAAT AAACAACTGGCCTTGTTATAATGC ] [-] EMBL CNS08NM9 [ GGAAGGTTGCCAAAAAAAGCTCGAGTTTGAGAAGGAGGAGCCAATGATACAGGAGTTTTTCAAGCGCCACATCGCATCGACCATCGTTGAGACGGAGCTGAAGACAAACTCGATGGTTGAGTGGCTGGAGAAGCTGCCGCTGCACAGCTACGAACCGAGGGACGAGAGTGAACCGAGCGAGTGGAAACCACGGAATAGGAAAGCTTCCGACGATCAGGATGACGATGACGAATAAAAACCACTGGCCTTGTTTTATTGCATTAGGCAAACGCTAAAAAAAAA] consensusID : consensus_9376#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1020 fasta sequence [AAAAAACATCCGTCTCCCCCACGCACCGGCACACGACTGGGCGATCGTTCACCGTGCATTTTCCGCTCAATGTTTTCGTGCTTCAGGCGTGCCGTTGCAGTAGCAGTAGATTTTCACTGTGCCACA-GCACAGCTCACGGAACAGTGCGCACGGAAGCTGTGCACACTGCCAACCGCGGCTCGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA--ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC-AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT-GGGA-AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACA-GTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCCGCGGCCATGCAGGTCGTGTCTATCAAGCTGCCTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAATCCTTGCCCTGTACGTGGGCACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCTGTGAAGCGGTTCATCATGTCGTTCGAGTGTCATCCACCCTTCCTGCCGGACGGGTCAACGGCAGAATTTGCTACGATTAAAATCA] [+] EMBL CNS08NM8 [AAAAAACATCCGTCTCCCCCACGCACCGGCACACGACTGGGCGATCGTTCACCGTGCATTTTCCGCTCAATGTTTTCGTGCTTCAGGCGTGCCGTTGCAGTAGCAGTAGATTTTCACTGTGCCACA GCACAGCTCACGGAACAGTGCGCACGGAAGCTGTGCACACTGCCAACCGCGGCTCGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT GGGA AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGTTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACA GTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCCGCGGCCATGCAGGTCGTGTCTATCAAGCTGCCTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAA ] [+] EMBL CNS08F9F [ CGTCT CCCCACGCACCGGCACACGACTGGGCGATCGTTCACCGTGCATTTTCCGCTCAATGTTTTCGTGCTTCAGGCGTGCCGTTGCAGTAGCAGTAGATTTTCACTGTGCCACA GCACAGCTCACGGAACAGTGCACACGGAAGCTGTGCACACTGCCAACCGCGGCTCGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT GGGA AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGC GGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACA GTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTTCGCGGCCATGCAGGTCGTGTCTATCAAGCTGCCTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTCACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAATCCTTGCCCTGTACGTGGGCACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCTGTGAAGCGGTTCATCATGTCGTTCGAGTGTCATCCACCCTTCCTGCCGGACGGGTCAACGGCAGAATTTGCTACGATTAAAATCA] [+] EMBL CNS08N36 [ TCACCGTGCCACATGCACAGCTCACGGAACAGTGCGCACGGAAGCTGTGCACACTGCCAACCGCGGCTCGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACCAAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGTGGGGATAGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGTTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCTGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACATGTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCCGCGGCCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAATGCTTGCCCTGTACGTGG ] [+] EMBL CNS099FA [ CACA GCACAGCTCACGGAACAGTG GCACGGAAGCTGTGCACACTGCCAACCGCGGCTCGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTG AACTAGCGGCCAAAAAGCAAGAGGCACAGAA ] [+] EMBL BX601850 [ CAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCA ACGTTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT GGGA AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCTGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCC GCAGATACA GTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCCGCGGCCA ] [+] EMBL BX467813 [ ccagaattcGGCACGATGGTTTGCGGCCGAACTTGCGGCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT GGGA AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAG ] [+] EMBL CNS09EN3 [ AAGCAAGAGGCACAGAAGCGAATGGAATCGCGCAAAACC AAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGT GGGA AGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGC GGTCAAGCGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGCAATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCTGAAGCGGGAGTGGATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACA GTTCCAGCGAGCGGCCCGCACCGATAAAGGCGTGTCCGCGGCCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAAT ] consensusID : consensus_9376#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 593 fasta sequence [GAATTGCCCGAGGTTGTGGCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCTGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCTGATGCCCTGTACCTACACTGTACACTGCTGCCTGACTGATATGCTGTTCNGCACCTGAACTGATGGAAAATGTGTCTGACATTCAAACTGTACCTGTCTGCCCTGCTGTGAACTGGCTGGCTCTGTGGTCAACGAAGTGCTTGCCCTGTACGTGGGTACGAATGAACTTTCACAACTTTACCAGCCTGCAATGGAGTTTCTCGATCCATCCTGTGAAGCTGGTTCATCATGTCGTATCCGAGTGTGATCCACCCTTCCTGCCTGGAAGGATCAACGGCAGAGTTTGCTACGATCAAAATCAAAGGACAAAGCTTCATGCTGCATCAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGCAAAGCGACCATCTACTCGAGCAAAGCGTTCGGCAGGATCGGTACGCGCATCCCGCACGGCACCCG] [+] EMBL AL931047 [GAATTGCCCGAGGTTGTGGCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGACATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCTGGGTGTATGCGGTGAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCTGATGCCCTGTACCTACACTGTACACTGCTGCCTGACTGATATGCTGTTCNGCACCTGAACTGATGGAAAATGTGTCTGACATTCAAACTGTACCTGTCTGCCCTGCTGTGAACTGGCTGGCTCTGTGGTCAACGAAGTGCTTGCCCTGTACGTGGGTACGAATGAACTTTCACAACTTTACCAGCCTGCAATGGAGTTTCTCGATCCATCCTGTGAAGCTGGTTCATCATGTCGTATCCGAGTGTGATCCACCCTTCCTGCCTGGAAGGATCAACGGCAGAGTTTGCTACGATCAAAATCAAAGGACAAAGCTTCATGCTGCATCAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGCAAAGCGACCATCTACTCGAGCAAAGCGTTCGGCAGGATCGGTACGCGCATCCCGCACGGCACCCG] consensusID : consensus_9376#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 426 fasta sequence [GAAACTATCGGCCAGAAAGCACAGAAGCGAATGGAATCGCGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAAGTGCTTGCCCTGTACGTGGGCACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCCGTGAAGCGGTTCATCATGTCGTTCGAGTGTGATCCACCCTTCCTGCCGGACGGGTCAACGGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCATCAGATACGG] [+] EMBL AGA283730 [GAAACTATCGGCCAGAAAGCACAGAAGCGAATGGAATCGCGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGCGTGACGAAAGGATTCAATTCCAAGACGAACTGCGACGCCCGTACCTACACGTACACGCTGCCGACGATAGCGTTCGCACCGAACGAGGAAAAGGTTGACATTCAAACGTACCGTCTGCCCGCGGAACGGCTGGCTCGGGTCAACGAAGTGCTTGCCCTGTACGTGGGCACGAAGAACTTTCACAACTTTACCAGCCGCAAGGAGTTTCTCGATCCATCCGTGAAGCGGTTCATCATGTCGTTCGAGTGTGATCCACCCTTCCTGCCGGACGGGTCAACGGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCATCAGATACGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 -----------------------CGTCCGCACACAACCGGGCGA-CGTTCGTCGTGCATT 36 consensus_9376#1 AAAAAACATCCGTCTCCCCCACGCACCGGCACACGACTGGGCGATCGTTCACCGTGCATT 60 consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 TTCTGCTCAATGTTTTCGTACTTCAGGCGTGCTTTAGCAATTTCCATAGATTTTCACCGT 96 consensus_9376#1 TTCCGCTCAATGTTTTCGTGCTTCAGGCGTGCCGTTGCAGTAGCAGTAGATTTTCACTGT 120 consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 GCCACAGCACAGCTCACGCAACAGTGCGCACGGAAGCTGTGCACA--------------- 141 consensus_9376#1 GCCACAGCACAGCTCACGGAACAGTGCGCACGGAAGCTGTGCACACTGCCAACCGCGGCT 180 consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 ---------GCGCCCGCAATAGACGACGGTGTGAGGCAACGTTTTGCGGCCGAACTTGCG 192 consensus_9376#1 CGCAGCCCAGCGCCCGCAATAGACGACGGTGTGAGGCAACGTTTTGCGGCCGAACTTGCG 240 consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 GCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCG 252 consensus_9376#1 GCCGCGGTGGAAGTGAAACTAGCGGCCAAAAAGCAAGAGGCACAGAAGCGAATGGAATCG 300 consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 CGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGTGG 312 consensus_9376#1 CGCAAAACCAAACAGGAGGTGCAGCAGCGGTACAATGGTGCGGTCAAGCGGCGCAAGTGG 360 consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 GAAGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGG-TCAAG 371 consensus_9376#1 GAAGATCCGCCCGAGGATCCGGAGGCGGTGAAAAACTTCGATCCCGCGTCGCGGGTCAAG 420 consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 CGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGC 431 consensus_9376#1 CGGCGCAAGAGCATCATCCTGCTCGGGTACTCGGGCGTGAACTACTTCGGCATGCAGCGC 480 consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 AATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGG 491 consensus_9376#1 AATCCGGGTACGAAAACGATCGAGGAGGATCTGCTGCGGGCGATGCAGAAGCGGGAGTGG 540 consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 ATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATCCAGTTCCAGCGAGCGGCCCGCACC 551 consensus_9376#1 ATCAATGACGAAGGGTTCCGGCAGCCGCAGCAGATACAGTTCCAGCGAGCGGCCCGCACC 600 consensus_9376#2 GAATTGCCCGAGGTTGTGGC-ATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGAC 59 consensus_9376#3 --------------------------GAAACTATCGGCCAGAAAGCACAGAAGC----GA 30 consensus_9376#0 GATAAAGGCGTGTCGGCGGCCATGCAGGTCGTGTCGATCAAGCTGCCTGACAATCTGGAC 611 consensus_9376#1 GATAAAGGCGTGTCCGCGGCCATGCAGGTCGTGTCTATCAAGCTGCCTGACAATCTGGAC 660 * * ** ** ** * consensus_9376#2 ATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCTGGGTGTA----TGCGGTGAAGC 115 consensus_9376#3 ATGGAATCGCGCAAAACCAAACAGG--AGGTGCAGCAGCGGTACAATGGTGCGGTCAAGC 88 consensus_9376#0 ATTGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCG-GGTGTA----TGCGGTGAAGC 666 consensus_9376#1 ATCGAGGCACTTAACTCCGAGCTGCCCGAGGACATCCG-GGTGTA----TGCGGTGAAGC 715 ** ** * * ** ** * * * * ** * *** * ****** **** consensus_9376#2 GCGTGACGAAAGGATTCAATTCCAAGACGAACTGCTGATGCCCTGTACCTACACTGTACA 175 consensus_9376#3 GCGTGACGAAAGGATTCAATTCCAAGACGAACTGC-GACGCCC-GTACCTACAC-GTACA 145 consensus_9376#0 GCGTGACGAAAGGATTCAATTCCAAGACGAACTGC-GATGCCC-GTACCTACAC-GTACA 723 consensus_9376#1 GCGTGACGAAAGGATTCAATTCCAAGACGAACTGC-GACGCCC-GTACCTACAC-GTACA 772 *********************************** ** **** ********** ***** consensus_9376#2 CTGCTGCCTGACTGATATGCTGTTCNGCACCTGAACTGATGGAAAATGTGTCTGACATTC 235 consensus_9376#3 C-GCTGCC-GACG---ATAGCGTTCG-CACC-GAACGA--GGAAAAGGT---TGACATTC 193 consensus_9376#0 C-GCTGCC-GACG---ATAGCGTTCG-CACC-GAACGA--GGAAAAGGT---CGACATTC 771 consensus_9376#1 C-GCTGCC-GACG---ATAGCGTTCG-CACC-GAACGA--GGAAAAGGT---TGACATTC 820 * ****** *** ** **** **** **** ****** ** ******* consensus_9376#2 AAACTGTACCTGTCTGCCCTGCTGTGAACTGGCTGGCTCTGTGGTCAACGAAGTGCTTGC 295 consensus_9376#3 AAAC-GTACC-GTCTGCCC----GCGGAACGGCTGGCTCGG--GTCAACGAAGTGCTTGC 245 consensus_9376#0 AAAC-GTACC-GTCTGCCC----GCGGAACGGCTGGCTCGG--GTCAACGAATGCTTTGC 823 consensus_9376#1 AAAC-GTACC-GTCTGCCC----GCGGAACGGCTGGCTCGG--GTCAACGAAT-CCTTGC 871 **** ***** ******** * * * ********* * ********* **** consensus_9376#2 CCTGTACGTGGGTACGAATGAACTTTCACAACTTTACCAGCCTGCAATGGAGTTTCTCGA 355 consensus_9376#3 CCTGTACGTGGGCACGAA-GAACTTTCACAACTTTACCAGCC-GCAA-GGAGTTTCTCGA 302 consensus_9376#0 CCTGTACGTGGGTACGAA-GAACTTTCACAACTTTACCAGCC-GCAA-GGAGTTTCTCGA 880 consensus_9376#1 CCTGTACGTGGGCACGAA-GAACTTTCACAACTTTACCAGCC-GCAA-GGAGTTTCTCGA 928 ************ ***** *********************** **** ************ consensus_9376#2 TCCATCCTGTGAAGCTGGTTCATCATGTCGTATCCGAGTGTGATCCACCCTTCCTGCCTG 415 consensus_9376#3 TCCATCC-GTGAAGC-GGTTCATCATGTCGT--TCGAGTGTGATCCACCCTTCCTGCC-G 357 consensus_9376#0 TCCATCC-GTGAAGC-GGTTCATCATGTCGT--TCGAGTGTGATCCACCCTTCCTGCC-G 935 consensus_9376#1 TCCATCT-GTGAAGC-GGTTCATCATGTCGT--TCGAGTGTCATCCACCCTTCCTGCC-G 983 ****** ******* *************** ******* **************** * consensus_9376#2 GAAGGATCAACGGCAGAGTTTGCTACGATCAAAATCAAAGGACAAAGCTTCATGCTGCAT 475 consensus_9376#3 GACGGGTCAACGGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCAT 417 consensus_9376#0 GAAGGATCAACGGCAGAGTTTGCTACGATTAAAATCAAAGGGCAAAGCTTCATGCTGCAT 995 consensus_9376#1 GACGGGTCAACGGCAGAATTTGCTACGATTAAAATCA----------------------- 1020 ** ** *********** *********** ******* consensus_9376#2 CAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGCAAAGCGA 535 consensus_9376#3 CAGATACGG--------------------------------------------------- 426 consensus_9376#0 CAGATACGGAAGATGGTGGGCCTCACCATAGCGGTCGTGCGCGGCCTCGCGGAAAGCGAC 1055 consensus_9376#1 ------------------------------------------------------------ consensus_9376#2 CCATCTACTCGAGCAAAGCGTTCGGCAGGATCGGTACGCGCATCCCGCACGGCACCCG-- 593 consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 ATTATCGAGAAAGCGTTCGGCCAGGAGCGGTACGGCATCCCGACGGCACCCGGGTTGGGG 1115 consensus_9376#1 ------------------------------------------------------------ consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 CTAGTGCTGAGCAGAATTCACTACGACAAGTACAACAAGCGGTACGGCGAGGACGGTTGC 1175 consensus_9376#1 ------------------------------------------------------------ consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 CACGAGACGCTCGAGTTTGAGAAGGAGGAGCCATTGATACAGGAGTTTTTCAAGCGCCAC 1235 consensus_9376#1 ------------------------------------------------------------ consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 ATCGCATCGACCATCGTCGAGACGGAGCTGAAGACGAACTCGATGGTCGAGTGGCTGGAG 1295 consensus_9376#1 ------------------------------------------------------------ consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 AAGCTGCCGCTGCACAGCTACGAACCGAGGGACGAGAGTGAACCGAGCGAGTGGAAACCA 1355 consensus_9376#1 ------------------------------------------------------------ consensus_9376#2 ------------------------------------------------------------ consensus_9376#3 ------------------------------------------------------------ consensus_9376#0 CGGAATAGGAAAGCTTCCGACGATCAGGATGACGATGACGAATAAACCACTGGCCTTGTT 1415 consensus_9376#1 ------------------------------------------------------------ consensus_9376#2 ------------------------------ consensus_9376#3 ------------------------------ consensus_9376#0 ATATTGCATTAGGCAAACGCTAAAAAAAAA 1445 consensus_9376#1 ------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||