cluster # 9386

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Anopheles gambiae
cluster # 9386 cluster # 9386 Sequences # 16 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9386#0 length = 985 sequences # 11

consensus_9386#1 length = 780 sequences # 3
consensus_9386#2 length = 644 sequences # 2

consensusID : consensus_9386#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 985
fasta sequence

                              [CCTACTGGGTTTAGT-TTCTTTTCACCCTTGGACGGAGCAATTAGCCGCTCTCGCTGGAGTTTT-GAAGTCATAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTG-TTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAGTACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTTCACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCGGGAATCAATCGGCCGGCCGCCTAATGCAGCGGCCCGCCTTACTGGGAAGTGTGTTAGAGCACAATGTCATGATCTCGCGTTGCATACTTCGATCTTCGGTTTGGTTCGAAGCGTTTTGTTTCACCTCGTACTTCGTTGCGCCT-TCGTTTCCATAATGTGCTCTAGCGCGTACATCAGCACTGGCTTTAAGAGAGGGAGAGAGAAAGAGGGCGAGAGAGCGGATTGAATAGTTGTTTTACCATCGTGTCGTCTGTAACATCAATATGGATAAATATAATCTTCGGGTTCTGCTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG]

[+] EMBL CNS0914Q             [CCTACTGGGTTTAGTATTCTTTTCACCCTTGGACGGAGCAATTAGCCGCTCTCGCTGGAGTTTT GAAGTTATAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTG TTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAGTACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGTTGCCTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTTCACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCGGGAATCAATCGGCCGGCCGCCTAATGCAGCGGCCCGCCTTACTG                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS099I0             [   ACTGGTTTTAGT TTCTTTTCACCCTTGGACGGAGCAATTAGCCGCTCTCGCTGGAGTTTT GAAGTTATAGTGCTCGCCAAGTGGTAAGGGCACCCCTAGTGCGTGCCGTTGACTGAGACGAAGAGTTGGTTGTTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAGTACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAA GTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTTCACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGTACGAACTATCGACCACCGGGAATCAATCGGCCGGCCGCCTAATGCAGCGGCCCGCCTTACTGGGAAGTGTGTTAGAGCACAATGTCATGATCTCGCGTTGCATACTTCGATCTTCGGTTTGGTTCGAAGCGTTTTGTTTCACCTCGTACTTCGTTGCGCCT TCGTTTCCATAATGTGCTCTAACGCGTACTTCAGCACTGGCTTTAAGAGAGGGAGAGAGAAAGAGGGCGAGAGAGCGGATTGAATAGTTGTTTTACCATCGTGTCGTCTGTAACATCAATATGGATAAATA                                                      ]
[+] EMBL BM604818             [           ccga TTCTTTTCACCCTTGGACGGAGCAATTAGCCGCTCTCGCTGGAGTTTT GAAGTTATAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTG TTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAATACACTCCGCTCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTGTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGGAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACACCGAGCTCGTTTACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTATTTTCCGCGCATTACCCCCAAACGGTCGCCAGGTGCCATCTTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCGGGAATCAAT                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM653309             [           ccga TTCTTTTCACCCTTGGACGGAGCAATTAGCCGCTCTCGCTGGAGTTTTCGAAGACACAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTG TTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAATACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTGTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGGAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACACCGAGCTCGTTTACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATTACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCAC                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BM647282             [                    ccgCACCATTGGACGGAGCAATTAGCCGCTCTCGCTGGAGTTTT GAAGTCATAGTGCTCGCCAAGTGGTAAGGGCACTCCTAGTGCGTGCCGTTGACTGAGACGAAGAGTTGGTTGATTGGTGTTTGTGAGTGGGAGGTTTATTGGAGCAGTACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTTCACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCGGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCA                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM653418             [                                  ccgGCAATTAGCCGCTCTCGCTGGAGTTTT GAAGTCATAGTGCTCGCCAAGTGGTAAGGGCACTCCTAGTGCGTGCCGTTGACTGAGACGAAGAGTTGGTTGATTGGTGTTTGTGAGTGGGAGGTTTATTGGAGCAGTACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTTCACCGATCTCGGGATGGGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM583396             [                                        ccgAGCCGCTCTCGCTGGAGTTTTCGAAGACACAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTG TTGGTGTTCGTGAGTGGGAGGTTTATTAAAGAAATACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTGTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGGAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACACCGAGCTCGTTTACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATTACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCGGGAATCAATCGGCCGGCCGCCTAATGCAGCttact                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS099I1             [                                                                                                                                           TGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAGTACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAAACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTTCACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGTACGAACTATCGACCACCGGGAATCAATCGGCCGGCCGCCTAATGCAGCGGCCCGCCTTACTGGGAAGTGTGTTAGAGCACAATGTCATGTTCTCGCGTTGCATACTTCGATCTTCGGTTTGGTTCGAAGCGTTTTGTTTCACCTCGTACTTCGTTGCGCCT TCGTTTCCATAATGTGCTCTAACGCGTACTTCAGAACTGGCTTTAAGAGAGGGAGAGAGAAAGAGGGCGAGAGAGCGGATTGAATAGTTGTTTTACCATCGTGTCGTCTGTAACATCAATATGGATAAATATAATCTTCGGGTTCTGCTAACAAAAAAAAAAAAA                    ]
[-] EMBL CNS0914R             [                                                                                                                                                                                                                                                                                                                                                    ATGAGGACGATGTCGAGCGAATGATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTTCACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCGGGAATCAATCGGCCGGCCGCCTAATGCAGCGGCCCGCCTTACTGGGAAGTGTGTTAGAGCACAATGTCATGATCTCGCGTTGCATACTTCGATCTTCGGTTTGGTTCGAAGCGTTTTGTTTCACCTCGTACTTCGTTGCGCCT TCGTTTCCATAATGTGCTCTAGCGCGTACATCAGCACTGGCTTTTAGAGAGGGAGAGAGAAAGAGGGCGAGAGAGCGGATTGAATAGTTGTTTTACCATCGTGTCGTCTGTAACATCAATATGGATAAATAT ATCTTCGGGTTCTGCTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG]
[+] EMBL BX612580             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATTACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCGGGAATCAATCGGCCGGCCGCCTAATGCAG        CTTACTGGGAAGTGTGTTAGAGCACA     ATGATCTCGCGTTGCAAACTTCGATCTTCGGTTTGGTTCGAAGCGTTTTGTTTCACCTCGTACTTCGTTGCGCCT TCGTTTCCATAATGTGCTCTAGCGCGTACATCAGCACTGGCTTTTAGAGAGGGAGAGAGAAAGAGGGCGAGAGAGCGGATTGAATAGTTGTTTTACCATCGTGTCGTCTGTAACATCAATATGGATAAATATAATCTTCGGG                                           ]
[-] EMBL CNS09FFF             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGTGTCATCAGCACGAACTATCGACCACCGGGAATCAATCGGCCGGCCGCCTAATGCAGCGGCCCGCCTTACTGGGAAGTGTGTTAGAGCACAATGTCATGGTCTCGCGTTGCATACTTCGATCTTCGGTTTGGTTCGAAGCGTTTTGTTTCACCTCGTACTTCGTTGCGCCTCTCGTTTCCATAATGTGCTCTAGCGCGTACATCAGAACTGGC                                                                                                                                                ]




>consensus_9386#0
CCTACTGGGTTTAGTTTCTTTTCACCCTTGGACGGAGCAATTAGCCGCTCTCGCTGGAGT
TTTGAAGTCATAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAG
ACGAAGATTTGGTTGTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAGTACACTCCGCC
CAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGC
CTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAA
GGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATG
ATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTTC
ACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATG
ATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAA
GCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAGC
TGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCGGGA
ATCAATCGGCCGGCCGCCTAATGCAGCGGCCCGCCTTACTGGGAAGTGTGTTAGAGCACA
ATGTCATGATCTCGCGTTGCATACTTCGATCTTCGGTTTGGTTCGAAGCGTTTTGTTTCA
CCTCGTACTTCGTTGCGCCTTCGTTTCCATAATGTGCTCTAGCGCGTACATCAGCACTGG
CTTTAAGAGAGGGAGAGAGAAAGAGGGCGAGAGAGCGGATTGAATAGTTGTTTTACCATC
GTGTCGTCTGTAACATCAATATGGATAAATATAATCTTCGGGTTCTGCTAACAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAG

consensusID : consensus_9386#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 780
fasta sequence

                              [CCGCGGACGCGTGGGAGCCGCTCTCGCTGGAGTTTTGAAGTTATAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTGTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAGTACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGTTGCCTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTTCACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCCGCTAATCGAGTGTAAATAGACTGACCCTCCCCTCCACCTGCAAACCCTTACTCACTCACATGAAGGATGAGTTTTGCACGCTGCACGCTCTCCAGTGCCCCCTGTCCCTGCTCCACACTGGTTTCAGCCCTAAACATCTCCACATCTGTTTCAGGCGTGTCATCAGCACGAACTATCGACCACCGGGAATC]

[+] EMBL BM586906             [CCGCGGACGCGTGGGAGCCGCTCTCGCTGGAGTTTTGAAGTTATAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTGTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAGTACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGTTGCCTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTTCACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCCGCTAATCGAGTGTAAATAGACTGACCCTCCCCTCCACCTGCAAACCCTTACTCACTCACATGAAGGATGAGTTTTGCACGCTGCACGCTCTCCAG                                                                                                ]
[+] EMBL BM585601             [                                                                                                                                                                             GACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGTTGCCTGTGGCTGTTTGCCTTTCAACTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCCAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAATAATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS09FFE             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTG CCGCTAATCGAGTGTAAATAGACTGACCCTCCCCTCCACCTGCAAACCCTTACTCACTCACATG AGGATGAGTTTTGCACGCTGCACGCTCTCCGGTGCCCCCTGTCCCTGCTCCACACTGGTTTCAGCCCTAAACATCTCCACATCTGTTTCAGGCGTGTCATCAGCACGAACTATCGACCACCGGGAATC]




>consensus_9386#1
CCGCGGACGCGTGGGAGCCGCTCTCGCTGGAGTTTTGAAGTTATAGTGCTCGCCAAGTGG
TAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTGTTGGTGTTTGTG
AGTGGGAGGTTTATTAAAGAAGTACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTC
CATCGTACGGCGATGGAAGTCAACAAGCGTTGCCTGTGGCTGTTTGCCTTTCAGCTGTTT
TGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTG
CGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGCAGAGGATCAGTTCGAAGCACCA
AAGCTTTTCTTTTACAGGACGCCAAGCTCGTTCACCGATCTCGGGATGGGAGAACCGTTG
GAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCA
CCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATC
ACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCCGCTAATCGAGT
GTAAATAGACTGACCCTCCCCTCCACCTGCAAACCCTTACTCACTCACATGAAGGATGAG
TTTTGCACGCTGCACGCTCTCCAGTGCCCCCTGTCCCTGCTCCACACTGGTTTCAGCCCT
AAACATCTCCACATCTGTTTCAGGCGTGTCATCAGCACGAACTATCGACCACCGGGAATC

consensusID : consensus_9386#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 644
fasta sequence

                              [CGACCCACGCGTCCGGGACGGAGCAATTAGCCGCTCTCGCTGGAGTTTTCGAAGACACAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTGTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAATACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTGTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGGAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACACCGAGCTCGTTTACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATTACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCG]

[+] EMBL BM642759             [CGACCCACGCGTCCGGGACGGAGCAATTAGCCGCTCTCGCTGGAGTTTTCGAAGACACAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTGTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAATACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTGTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGGAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACACCGAGCTCGTTTACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATTACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTGCCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCG]
[+] EMBL BX617487             [                                                    AGACACAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGTTGTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAATACACTCCGCCCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTGCCTTTCAGCTGTGTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGGAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACACCGAGCTCGTTTACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCATACGAAGGAAGCGACCCGTTACTACTTTCCGCGCATTACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGGCATTCCTGCCGCTAATCGAGTGCGTG                          ]




>consensus_9386#2
CGACCCACGCGTCCGGGACGGAGCAATTAGCCGCTCTCGCTGGAGTTTTCGAAGACACAG
TGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGAGACGAAGATTTGGT
TGTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAATACACTCCGCCCAGCACTCGGCAA
TCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTGCCTGTGGCTGTTTG
CCTTTCAGCTGTGTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGAAGGTGTGAATTTCT
ACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAATGATAGGAGAGGATC
AGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACACCGAGCTCGTTTACCGATCTCGGGA
TGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACATGATGATCGCCAAGG
ACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGAAGCGACCCGTTACT
ACTTTCCGCGCATTACCCCCAAACGGTCGCCAGGTGCCATCCTGAGCTGGGCCATTCCTG
CCGCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9386#0      CCTACTGGGTTTAGTTTCTTTTCACCCTTGGACGGAGCAATTAGCCGCTCTCGCTGGAGT 60
consensus_9386#2      --------------CGACCCACGCGTCCGGGACGGAGCAATTAGCCGCTCTCGCTGGAGT 46
consensus_9386#1      -------------------------CCGCGGACGCGTGGG--AGCCGCTCTCGCTGGAGT 33
                                                *  *****        ******************

consensus_9386#0      TTT-GAAGTCATAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGA 119
consensus_9386#2      TTTCGAAGACACAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGA 106
consensus_9386#1      TTT-GAAGTTATAGTGCTCGCCAAGTGGTAAGGGCACCGCTAGTGCGTGCCGTTGACTGA 92
                      *** ****  * ************************************************

consensus_9386#0      GACGAAGATTTGGTTGTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAGTACACTCCGC 179
consensus_9386#2      GACGAAGATTTGGTTGTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAATACACTCCGC 166
consensus_9386#1      GACGAAGATTTGGTTGTTGGTGTTTGTGAGTGGGAGGTTTATTAAAGAAGTACACTCCGC 152
                      ************************************************* **********

consensus_9386#0      CCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTG 239
consensus_9386#2      CCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGCTG 226
consensus_9386#1      CCAGCACTCGGCAATCAAACGGACTCTCCATCGTACGGCGATGGAAGTCAACAAGCGTTG 212
                      ********************************************************* **

consensus_9386#0      CCTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGA 299
consensus_9386#2      CCTGTGGCTGTTTGCCTTTCAGCTGTGTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGA 286
consensus_9386#1      CCTGTGGCTGTTTGCCTTTCAGCTGTTTTGGTTCCTGTGCTTGGTGGAATCCTATCCCGA 272
                      ************************** *********************************

consensus_9386#0      AGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAAT 359
consensus_9386#2      AGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAAT 346
consensus_9386#1      AGGTGTGAATTTCTACAAAGACTGGCTGCGTAACAAAAATGAGGACGATGTCGAGCGAAT 332
                      ************************************************************

consensus_9386#0      GATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTT 419
consensus_9386#2      GATAGGAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACACCGAGCTCGTT 406
consensus_9386#1      GATAGCAGAGGATCAGTTCGAAGCACCAAAGCTTTTCTTTTACAGGACGCCAAGCTCGTT 392
                      ***** ****************************************** ** ********

consensus_9386#0      CACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACAT 479
consensus_9386#2      TACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACAT 466
consensus_9386#1      CACCGATCTCGGGATGGGAGAACCGTTGGAGAAACGGACGGTCAACAGGTACAAAAACAT 452
                       ***********************************************************

consensus_9386#0      GATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGA 539
consensus_9386#2      GATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGA 526
consensus_9386#1      GATGATCGCCAAGGACAATCTCGATGCACCACTGACGGACGATGCCGAGCAGACGAAGGA 512
                      ************************************************************

consensus_9386#0      AGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAG 599
consensus_9386#2      AGCGACCCGTTACTACTTTCCGCGCATTACCCCCAAACGGTCGCCAGGTGCCATCCTGAG 586
consensus_9386#1      AGCGACCCGTTACTACTTTCCGCGCATCACCCCCAAACGGTCGCCAGGTGCCATCCTGAG 572
                      *************************** ********************************

consensus_9386#0      CTGGGCCATTCCTGCC-GCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCGG 658
consensus_9386#2      CTGGGCCATTCCTGCC-GCTAATCGAGTGCGTGTCATCAGCACGAACTATCGACCACCG- 644
consensus_9386#1      CTGGGCCATTCCTGCCCGCTAATCGAGTGTAAATAGACTGACC---CTCCCCTCCACCTG 629
                      **************** ************    *   * *  *   **  *  *****  

consensus_9386#0      GAATCAATCGGCCGGCCGCCTAATGCAGCGGCCCGCCTTACTGGGAAGTGTGTTAGAGCA 718
consensus_9386#2      ------------------------------------------------------------
consensus_9386#1      CAAACCCTTACTCACTCACATGAAGGATGAGTTTTGCACGCTGC-ACGCTCTCCAGTGCC 688
                                                                                  

consensus_9386#0      CAATGTCATGATCTCGCGTTGCATACTTCGATCTTCGGTTTGGTTCGAAGCGTTTTGTTT 778
consensus_9386#2      ------------------------------------------------------------
consensus_9386#1      CCCTGTCCCTGCTCCACACTG---GTTTCAGCCCTAAACAT--CTCCACA---TCTGTTT 740
                                                                                  

consensus_9386#0      CACCTCGTACTTCGTTGCGCCTTCGTTTCCATAATGTGCTCTAGCGCGTACATCAGCACT 838
consensus_9386#2      ------------------------------------------------------------
consensus_9386#1      CAGGCGTGTCATCAGCACGAACTATCGACCACCGGGAATC-------------------- 780
                                                                                  

consensus_9386#0      GGCTTTAAGAGAGGGAGAGAGAAAGAGGGCGAGAGAGCGGATTGAATAGTTGTTTTACCA 898
consensus_9386#2      ------------------------------------------------------------
consensus_9386#1      ------------------------------------------------------------
                                                                                  

consensus_9386#0      TCGTGTCGTCTGTAACATCAATATGGATAAATATAATCTTCGGGTTCTGCTAACAAAAAA 958
consensus_9386#2      ------------------------------------------------------------
consensus_9386#1      ------------------------------------------------------------
                                                                                  

consensus_9386#0      AAAAAAAAAAAAAAAAAAAAAAAAAAG 985
consensus_9386#2      ---------------------------
consensus_9386#1      ---------------------------