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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9401#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1080 fasta sequence
[AGATTGCCCGAGGTNGAACTCGTCAAGGGCACTTCTTTCTCGGCCTCAGCCTGATGGAGCTGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCCACGATCTGGCCAAGGAGCAGAAGCTCAACTTCGGGGACGATATTGCGTCCCAGCTGCGGCTGGCGCGGAAGAAGCGCTGGAACATACAGGAGGAGAAGCGCATCTGTCAGGAGATTGAGCTGCAATCGTATCTAAATAGACTTATCACGGAAGACATGGAAAACCGTATGGCCAAGCTGAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCAAAGGTGGACGATAGGCGACGGAAACGAGAGGTACCTGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTCCGGCATGACGTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACTTCGATCCGGTGACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAACGAATGGGCGCTCGATTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTGTAGCAGTAGCTAGGAGAGGAGTATGTTTTGGGAGTGCGTTTGAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAATTAAGCAACAGTGTGTTTTTACAACCTTGATTGAATGCAAAAAGTAAGAAGAAAAAAATAATTAGAAGTTTAAAGAAAAAAAGGAAATTTGTTATAAAAAAGAATTTCAATGATGATCGTTATAATTAGGATGAAAAACACAGAAACAAAAAAACGCTCCGCAGAACTTCCCATCATAGGTCCCCCCCCCCCCTCTATAGTTAACGGCCAGGAAGTAGCGCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATAT]
[+] EMBL AL931691 [AGATTGCCCGAGGTNGAACTCGTCAAGGGCACTTCTTTCTCGGCCTCAGCCTGATGGAGCTGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCCACGATCTGGCCAAGGAGCAGAAGCTCAACTTCGGGGACGATATTGCGTCCCAGCTGCGGCTGGCGCGGAAGAAGCGCTGGAACATACAGGAGGAGAAGCGCATCTGTCAGGAGATTGAGCTGCAATCGTATCTAAATAGACTTATCACGGAAGACATGGAAAACCGTATGGCCAAGCTGAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATCGAGCGAGAGAGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCAAAGGTGGACGATAGGCGACGGA ]
[+] EMBL BX610895 [ CTCAACTTCGGGGACGATATTGCGTCCCAGCTCCGGCTGGCGCGGAAGAAGCGCTGGAACATACAGGAGGAGAAGCGCATCTGTCAGGAGATTGAGCTGCAATCGTATCTGAATAGACTTATCACGGAAGACATGGAAAACCGTATGGCCAAGCTGAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCGAAGGTGGACGATAGGCGACGGAAACGAGAGGTACCTGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTCCGGCATGACGTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACTTCGATCCGGTGACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCATGAGAACGAATGGGCGCTCGATTATTAGGAGACGGCGGC ]
[+] EMBL BM653047 [ ccgGGAGGAGAAGCGCATCTGTCAGGAGATTGAGCTGCAATCGTATCTAAATAGACTTATCACGGAAGATATGGAAAACCGTATGGCCAAGCTGAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCAAAGGTGGACGATAGGCGACGGAAACGAGAGGTACCTGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTCGATCCCGTCATCACACCGTCCGGCATGACCTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTCGGCCACTTCGATCCGGTAACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAACGAATGGGCGCTCGATTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTGTAGCAGTAGCTAGGAGAGGAGTATGTTTTGGGAGTGCGTTTGAGACGA ]
[+] EMBL BX610195 [ GCATGACGTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACTTCGATCCGGTGACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAACGAATGGGCGCTCGATTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTGTAGCAGTAGCTAGGAGAGGATTACGGTTT GGAGTGCGTTTGAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAATTAAGCAACAGTGTGTTTTTACAACCTTGATTGAATGCAAAAAGTAAGAAGAAAAAAATAATTAGAAGTTTAAAGAAAAAAAGGAAATTTGTTATAAAAAAGAATTTCAATGATGATCGTTATAATTAGGATGAAAAACACAGAAACAAAAAAACGCTCCGCAGAACTTCCCATCATAGGTCCCCCCCCCCCCTCTATAGTTAACGGCCAGGAAGTAGCGCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATAT]
consensusID : consensus_9401#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 964 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGTTGTGCGTGACGAAAATCGACCAGCCACGGAGGGTCTGCAGGCGTACCGAACAGCAAATACGAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGGGTTTCGGTACATTCGCTTTCCCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGCCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACACTGGAACACCTGGCGGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTATAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCCAAGCGGGTCCGTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCCTGTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCGAATCTGTCGGACGTCGAGCTAAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCTGCCACATCAAAATGAAGCGCTGGGAGACGGCCTGCGTCGACTGCCGACGGGCGCTCGATATGGATCCGAACCTCGTCAAAGGGCACTTCTTTCTCGGCCTCAGCCTGATGGAGCTGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCC]
[+] EMBL BM620692 [CCGCCCACGCGTCCGCCCACGCGTCCGGTTGTGCGTGACGAAAATCGACCAGCCACGGAGGGTCTGCAGGCGTACCGAACAGCAAATACGAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGGGTTTCGGTACATTCGCTTTCCCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGCCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACACTGGAACACCTGGCGGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTATAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCCAAGCGGGTCCGTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCCTGTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCGAATC ]
[+] EMBL BM639548 [ GCAGGCGTACCGAACAGCAAATACGAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGGGTTTCGGTACATTCGCTTTCCCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGCCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACACTGGAACACCTGGCGGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTATAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCA ]
[+] EMBL BM644956 [ CCGCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGCCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACACTGGAACACCTGGCGGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTATAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCCAAGCGGGTCCGTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGT CCCCCTGTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCGAATCTGTCGGACGTCGAGCTAAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCTGCCACATCAAAATGAAGCGCTGGGAGACGGCCTGCGTCGACTGCCGACGGGCGCTCGATATGGATCCGAACCTCGTCAAAGGGCACTTCTTTCTCGGCCTCAGCCTGATGGAGCTGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCC]
consensusID : consensus_9401#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 944 fasta sequence
[CAACAAAAAACAACAAAAAAAAATCAAAGGGATTTCATTTGTTGTGCGTGACGAAAATCGACCAGCCACGGAGGGACTGCAGGCGTACCGAACAGCAGATACCAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGAGTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTGGATGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATATGTAAAGGGAACAGCTCGTCAGCACCGCCAGCCAGTTGGCAGCATTGTTTGTGGAGCGCATCACCTCCCGT]
[+] EMBL CNS09F57 [CAACAAAAAACAACAAAAAAAAATCAAAGGGATTTCATTTGTTGTGCGTGACGAAAATCGACCAGCCACGGAGGGACTGCAGGCGTACCGAACAGCAGATACCAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGAGTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTGGATGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGT CATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATATGTAAAGGGAACAGCTCGTCAGCACCGCCAGCCAGTTGGCAGCATTGTTTGTGGAGCGCATCACCTCCCGT]
[+] EMBL CNS09J9L [ AAACAAC AAAAAAAATCAAAGGGATTTCATTTGTTGTGCGTGACGAAAATCGACCAGCCACGGAGGGACTGCAGGCGTACCGAACAGCAGATACCAATTAATTTCCCAACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGAGTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTGGATGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATATGTAAAGGGAGCAGCTCGTCAGCACCGCCAGCGAGTTGGCAGCATTG ]
[+] EMBL BM590987 [ ccgCCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGTGTTCAGTTTTCCCAGACGGTCGAGTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGGCTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTGACAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTGGATGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACG ]
[+] EMBL CNS09HY1 [ CCCAGACGGTCGATTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGGCTGTTTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTCTTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTTACAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTGGATGGAATGTACTGTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGATTTGTGCCCGATAGATAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCACCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGAAAAATAAAGGGAACAGCTCGTCAGCACCGCCAGCCAGTTGGCAGCATTGTTTGTGGAGCGCATCATCTTCCGT]
[-] EMBL CNS09HY2 [ CCAACAATGAGCAAGCATATGTACTCCCCGGCAAATTTTTCGGACGTCGAGCTTAAGGATCAAAGCAATCGGCTCTTCTCCGCCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATAAAAAACTCCAAAAATGCCACCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATATGTAAAGGGAACAGCTCGTCAGCACCGCCAGCCAGTTGGCAGCAT ]
[-] EMBL CNS09J9M [ CCCGGAAGTACGACGATGCCGTCAATCTGTACACGAAAGCAATCATCAAAAACTCCACAAATGCCCCCTACTTTACGAACCGCGCCCTCAACAACAATTCGATGTGATT ]
consensusID : consensus_9401#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence
[CAGATCCCCACGAGTTGAGAAGACATGGAAAACGTATCGCAAGCTTAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCGAAGGTGGACGATAGGCGACGGAAACGAGAGGTACCTGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTCCGGCATGACGTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACTTCGATCCGGTGACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAACGAATGGGCGCTCGACTTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTGTAGCAGTAGCTAGGAGAGGATTACGGTTTGGACGTGCGTTTGAAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAATTTAAGCAACAGTGTGTNANNACAAACCTTGATTGACATGCAAAAAAGTAAGAAGAAAGAAGACATAATTAGAACGTTTAANAGGAAAGACACAGGGAAACTATGTCACT]
[+] EMBL BX467268 [CAGATCCCCACGAGTTGAGAAGACATGGAAAACGTATCGCAAGCTTAAGGTGGACGACACGATCAACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGACTGAATTAAACAATCTGTTTGCGAAGGTGGACGATAGGCGACGGAAACGAGAGGTACCTGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTCCGGCATGACGTACGAGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACTTCGATCCGGTGACGCGCGTCAAACTGACGCAGGACCAGCTGATATCGAACTACTCGATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAACGAATGGGCGCTCGACTTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTGTAGCAGTAGCTAGGAGAGGATTACGGTTTGGACGTGCGTTTGAAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAATTTAAGCAACAGTGTGTNANNACAAACCTTGATTGACATGCAAAAAAGTAAGAAGAAAGAAGACATAATTAGAACGTTTAANAGGAAAGACACAGGGAAACTATGTCACT]
consensusID : consensus_9401#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 594 fasta sequence
[AGGCAAGAATCCCCACGAGNNAAACGCCACATTGGAGCACCTGCGATGGAATGTACTGTGGTCAGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGGAAGTACGACGATGCCGTCGAATCTGTACACGAAAGCAATCATCAAGAGAACTCCAGCGAANATGCCACCGTACTTTACGAAGCCGCGCCCTCTGGCACATCAAAATGAAGGCGCTGGGAGACGGACTGCGTCGACTGCCGGACGGGCGCTCGATATGGACCCGAAGCTCGTCAAAGGGCACTTCTATTACTCGGGCTCAGGCTGA]
[+] EMBL BX468211 [AGGCAAGAATCCCCACGAGNNAAACGCCACATTGGAGCACCTGCGATGGAATGTACTGTGGTCAGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTGCTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCTGAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCCGAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTTTGCGGTCCACCGAAACCCGCATACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTTAAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGGAAGTACGACGATGCCGTCGAATCTGTACACGAAAGCAATCATCAAGAGAACTCCAGCGAANATGCCACCGTACTTTACGAAGCCGCGCCCTCTGGCACATCAAAATGAAGGCGCTGGGAGACGGACTGCGTCGACTGCCGGACGGGCGCTCGATATGGACCCGAAGCTCGTCAAAGGGCACTTCTATTACTCGGGCTCAGGCTGA]
consensusID : consensus_9401#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 421 fasta sequence
[GCTCAGGCAGAATCCCCCACGAGGTTTCAGATTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTAGTAGCAGTAGCTAGGAGAGGATTACGGTTTGGAGTGCGTTTGAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAAGTTAAGCAACAGTGTGTTTTTACAACCTTGATTGAATGCAAAAAGTAAGAAGAAAAAAATAAGTTAGAAGTTTAACAGAAACAGAAAGGAAATATTGTTATAAAAGAAGGAATTTCAAGTGCAGTGATCGTTATAATTAGGATGAAGAAGACACAGGAAGACGAAAAGAAAGCGCGTCCGACAGAACTTCCCATCATAGGGTCACCCGCGCGCGCACCCNATCTTGCTG]
[+] EMBL BX466503 [GCTCAGGCAGAATCCCCCACGAGGTTTCAGATTATTAGGAGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCGATTATCCCCCGAGGTGTGTGTAGTAGCAGTAGCTAGGAGAGGATTACGGTTTGGAGTGCGTTTGAGACGATAGGGGTAGAGAACAGGGACAGTATGTATGTACATGGTAGCACCAAAGTTAAGCAACAGTGTGTTTTTACAACCTTGATTGAATGCAAAAAGTAAGAAGAAAAAAATAAGTTAGAAGTTTAACAGAAACAGAAAGGAAATATTGTTATAAAAGAAGGAATTTCAAGTGCAGTGATCGTTATAATTAGGATGAAGAAGACACAGGAAGACGAAAAGAAAGCGCGTCCGACAGAACTTCCCATCATAGGGTCACCCGCGCGCGCACCCNATCTTGCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9401#1 ------------------------------------------------------------
consensus_9401#4 ------------------------------------------------------------
consensus_9401#2 ------------------------------------------------------------
consensus_9401#0 AGATTGCCCGAGGTNGAACTCGTCAAGGGCACTTCTTTCTCGGCCTCAGCCTGATGGAGC 60
consensus_9401#3 ------------------------------------------------------------
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 ------------------------------------------------------------
consensus_9401#4 ------------------------------------------------------------
consensus_9401#2 ------------------------------------------------------------
consensus_9401#0 TGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCCACGATCTGGCCAAGGAGC 120
consensus_9401#3 ------------------------------------------------------------
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 --------------------------CCGCCCACGCGTCCGCCCACGCGTCCGGTTGTGC 34
consensus_9401#4 ------------------------------------------------------------
consensus_9401#2 -------------CAACAAAAAACAACAAAAAAAAATCAAAGGGATTTCATTTGTTGTGC 47
consensus_9401#0 AGAAGCTCAACTTCGGGGACGATATTGCGTCCCAGCTGCGGCTGGCGCGGAAGAAGCGCT 180
consensus_9401#3 ------------------------------------------------------------
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 GTGACGAAAATCGACCAGCCACGGAGGGTCTGCAGGCGTACCGAACAGCAAATACGAATT 94
consensus_9401#4 ------------------------------------------------------------
consensus_9401#2 GTGACGAAAATCGACCAGCCACGGAGGGACTGCAGGCGTACCGAACAGCAGATACCAATT 107
consensus_9401#0 GGAACATACAGGAGGAGAAGCGCATCTGTCAGGAGATTGAGCTGCAATCGTATCTAAATA 240
consensus_9401#3 ------------------------------------------------CAGATCCCCACG 12
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 AATTTCCCA-ACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGT 153
consensus_9401#4 ------------------------------------------------------------
consensus_9401#2 AATTTCCCA-ACCATACCCGCGGGTGGGGGTTGTCGTGTGCGTGTGTGACCGAGTTTTGT 166
consensus_9401#0 GACTTATCACGGAAGACATGGAAAACCGTATGGCCAAGCTGAAGGTGGACGACACGATCA 300
consensus_9401#3 AGTTGA-----GAAGACATGGAAAAC-GTATCGC-AAGCTTAAGGTGGACGACACGATCA 65
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 GTTCAGTTTTCCCAGACGGTCGGGTTTCGGTACATTCGCTTTCCCCCAGCTGCAGCTCGG 213
consensus_9401#4 ------------------------------------------------------------
consensus_9401#2 GTTCAGTTTTCCCAGACGGTCGAGTTTCGGTGCATTCGCTTTCGCCCAGCTGCAGCTCGG 226
consensus_9401#0 ACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGA 360
consensus_9401#3 ACGAGGAAACGCTCAAGGAAAAGGCGATGGAGATAGAGCGAGAGGGCGAAAATCATATGA 125
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 CTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTC 273
consensus_9401#4 ------------------------------------------------------------
consensus_9401#2 CTGTGTTGTGTTTTTGGTTGGCTGTGGCAGTGGTGGTGGGGCGGATTGATATTTTCCCTC 286
consensus_9401#0 CTGAATTAAACAATCTGTTTGCAAAGGTGGACGATAGGCGACGGA--AACGAGAGGTACC 418
consensus_9401#3 CTGAATTAAACAATCTGTTTGCGAAGGTGGACGATAGGCGACGGA--AACGAGAGGTACC 183
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 TTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGCCGTGTGTGTGTGTGA 333
consensus_9401#4 ---------------------------------------------------------AGG 3
consensus_9401#2 TTCCCCCCTTGTTAGTAGAGCAGTTTGGAAACTATTTTGGGTCGTCGTGTGTGTGTGTGA 346
consensus_9401#0 TGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTC 478
consensus_9401#3 TGACTACCTGTGCGGCAAGATCAGCTTCGAGCTGCTGGTAGATCCCGTCATCACACCGTC 243
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 CAATTAGGTCCGCATTTTATTGGAACGCCACACTGGAACACCTG-GCGGGAATG--TACT 390
consensus_9401#4 CAAGAATCCCCACG----AGNNAAACGCCACATTGGAGCACCTGCGATGGAATG--TACT 57
consensus_9401#2 CAATTAGGTCCGCATTTTATTGGAACGCCACATTGGAGCACCTG-GATGGAATG--TACT 403
consensus_9401#0 CGGCATGACGTACG----AGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACT 534
consensus_9401#3 CGGCATGACGTACG----AGCGGAAGGACATCGAGGAGCATCTGCAGCGGGTTGGCCACT 299
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 GTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTG 450
consensus_9401#4 GTGGTCAGG-TACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTG 116
consensus_9401#2 GTGGTCAGGGTACAGTGGTGAAGTGATTCCTGGTTTCTGCTGCTGCCTGGAAACGGATTG 463
consensus_9401#0 TCGATCCGGTGACGCGCGTCAAACTGACGCAGGAC----CAGCTGATATCGAACTACTCG 590
consensus_9401#3 TCGATCCGGTGACGCGCGTCAAACTGACGCAGGAC----CAGCTGATATCGAACTACTCG 355
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 CTGAGTGGCATTGCTGCACACTCCTTATAAGTGCATTGAAAGTATGCCTGGCTCGATGCT 510
consensus_9401#4 CTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCT 176
consensus_9401#2 CTGAGTGGCATTGCTGCACACTCCTTACAAGTGCATTGAAAGTATGCCTGGCTCGATGCT 523
consensus_9401#0 ATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAAC-GAATGGGCGCTCGA-TTATTAGG 648
consensus_9401#3 ATGAAGGAGGTGGTGGACGCGTTCCTGCAGGAGAAC-GAATGGGCGCTCGACTTATTAGG 414
consensus_9401#5 --------------------GCTCAGGCAGAATCCC-CCACGAGGTTTCAGATTATTAGG 39
* * * * * *
consensus_9401#1 GAACTAGAAGACCCAAGTCCATCCGGCCTCCAAGCGGGTCCGTGCGCGAGAGTTGTGCCC 570
consensus_9401#4 GAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCC 236
consensus_9401#2 GAACTAGAAGACCCAAGTCCATCCGGCCTCAAAGCGGATTCTTGCGCGAGAGTTGTGCCC 583
consensus_9401#0 AGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCG-ATTATCCCCCGAGGTGTGTGT-- 705
consensus_9401#3 AGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCG-ATTATCCCCCGAGGTGTGTGT-- 471
consensus_9401#5 AGACGGCGGCGACGGAAACGAAGGAATTGCAGCGCG-ATTATCCCCCGAGGTGTGTGTA- 97
** * * * * * *** * * **** ****
consensus_9401#1 GAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCCTGTGCGGTCCACCGAAACCCGCA 630
consensus_9401#4 GAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTT-TGCGGTCCACCGAAACCCGCA 295
consensus_9401#2 GAAAGAAAAGAAGCAAACAGAAAGAAACGGTCCCCCTT-TGCGGTCCACCGAAACCCGCA 642
consensus_9401#0 ---GTAGCAGTAGCTAGGAGAGGAGTATGTTTTGGGAG-TGCGTTTGA-GACGATAGGGG 760
consensus_9401#3 ---GTAGCAGTAGCTAGGAGAGGATTACGGTTTGGACG-TGCGTTTGAAGACGATAGGGG 527
consensus_9401#5 ---GTAGCAGTAGCTAGGAGAGGATTACGGTTTGGA-G-TGCGTTTGA-GACGATAGGGG 151
* ** *** * *** * * * **** * * * *
consensus_9401#1 TACATCCCAACAATGAGCAAGCATATGTACTCCACGGCGAATCTGTCGGACGTCGAGCTA 690
consensus_9401#4 TACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTT 355
consensus_9401#2 TACATCCCAACAATGAGCAAGCATATGTACTCCACGGCAAATCTGTCGGACGTCGAGCTT 702
consensus_9401#0 TAGAG---AACAGGGACAGTATGTATGTA---CATGGTAG----------CACCAAATT- 803
consensus_9401#3 TAGAG---AACAGGGACAGTATGTATGTA---CATGGTAG----------CACCAAATTT 571
consensus_9401#5 TAGAG---AACAGGGACAGTATGTATGTA---CATGGTAG----------CACCAAAGTT 195
** * **** ** ****** ** ** * * * *
consensus_9401#1 AAGGATCAAGGCAATCGGCTCTTCTCCGCCCGG-AAGTACGACGATGCCGTC-AATCTGT 748
consensus_9401#4 AAGGATCAAGGCAATCGGCTCTTCTCCGCCCGGGAAGTACGACGATGCCGTCGAATCTGT 415
consensus_9401#2 AAGGATCAAGGCAATCGGCTCTTCTCCGCCCGG-AAGTACGACGATGCCGTC-AATCTGT 760
consensus_9401#0 AAGCAACAGTGTGTTTTTACAA-CCTTGATTGA-ATGCAAAAA-GTAAGAAG-AAAAAA- 858
consensus_9401#3 AAGCAACAGTGTGTNANNACAAACCTTGATTGACATGCAAAAAAGTAAGAAG-AAAGAAG 630
consensus_9401#5 AAGCAACAGTGTGTTTTTACAA-CCTTGATTGA-ATGCAAAAA-GTAAGAAG-AAAAAA- 250
*** * ** * * * * * * * * * **
consensus_9401#1 ACACGAAAGCAATCATCAAA--AACTCCAC---AAATGCCACC-TACTTTACGAA-CCGC 801
consensus_9401#4 ACACGAAAGCAATCATCAAGAGAACTCCAGCGAANATGCCACCGTACTTTACGAAGCCGC 475
consensus_9401#2 ACACGAAAGCAATCATCAAA--AACTCCAC---AAATGCCACC-TACTTTACGAA-CCGC 813
consensus_9401#0 --ATAA-TTAGAAGTTTAA-----AGAAAA---AAAGGAAATTTGT-TATAAAAAAGAAT 906
consensus_9401#3 ACATAA-TTAGAACGTTTA-----ANAGGA---AAGACACA---------GGGAAACTAT 672
consensus_9401#5 --ATAAGTTAGAAGTTTAACAGAAACAGAA---AGGAAATATTGTTATAAAAGAAGGAAT 305
* * * * * * * **
consensus_9401#1 GCCCTCTGCCACA--TCAAAATGAAG-CGCTGGGAGACGGCCTGCGTCGACTGCCG-ACG 857
consensus_9401#4 GCCCTCTGGCACA--TCAAAATGAAGGCGCTGGGAGACGGACTGCGTCGACTGCCGGACG 533
consensus_9401#2 GCCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGCTAGATA 873
consensus_9401#0 TTCAA---TGATGA-TCGTTATAATTAGGATGAAAAACACA---------GAAACAAAAA 953
consensus_9401#3 GTCAC---T--------------------------------------------------- 678
consensus_9401#5 TTCAAGTGCAGTGA-TCGTTATAATTAGGATGAAGAAGACACAGGAAGACGAAAAGAAAG 364
*
consensus_9401#1 GGCGCTCGATATGGATCCGAACCTC-----GTCAAAGGGCACTTC--TTTCTCGGCCTCA 910
consensus_9401#4 GGCGCTCGATATGGACCCGAAGCTC-----GTCAAAGGGCACTTCTATTACTCGGGCTCA 588
consensus_9401#2 TGTAAAGGGAACAGCTCGTCAGCACCGCCAGCCAGTTGGCAGCATTGTTTGTGGAGCGCA 933
consensus_9401#0 AACGCTCCGCAGAACTTCCCATCATAGGTCCCCCCCCCCCCTCTATAGTTAACGGCCAGG 1013
consensus_9401#3 ------------------------------------------------------------
consensus_9401#5 CGCGTCCGACAGAACTTCCCATCATAGGGTCACCCGCGCGCGCACCCNATCTTGCTG--- 421
consensus_9401#1 GCCTGATGGAGCTGGAATCGTTCGACGAAGCGATCAAGCACCTGCAGCGCGCCC------ 964
consensus_9401#4 GGCTGA------------------------------------------------------ 594
consensus_9401#2 TCACCTCCCGT------------------------------------------------- 944
consensus_9401#0 AAGTAGCGCCTCAACAACAATTCGATGTGATTTAAGTTAGTGACCCGTAAAGTGTATGGC 1073
consensus_9401#3 ------------------------------------------------------------
consensus_9401#5 ------------------------------------------------------------
consensus_9401#1 -------
consensus_9401#4 -------
consensus_9401#2 -------
consensus_9401#0 TAGATAT 1080
consensus_9401#3 -------
consensus_9401#5 -------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||