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Anopheles gambiae
cluster # 9409 cluster # 9409       Sequences # 16       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9409#0 length = 1356 sequences # 15  
consensus_9409#1 length = 514 sequences # 1  

consensusID : consensus_9409#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1356
fasta sequence
                              [CCGCTTCCC-GCAAACGCGTGAAGTAAATACATCTCGTGAGACGTCGACGAAAAAGCAAGTGAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGAAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGAT-GGGTGGGGTTGGCGGCGGGTTGGAAAGCATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGACTGCTG-AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC-GGTCC---GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC-GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG-AAAAAAATGGCCATCGGGCATCACA-TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACC-GGGGTGCAGGAGGAACGGCAGGACTTTATCAACCTGGACGACG-AGGAGGCGG-AAGACTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACCGTGCTGGGCGGTCAC-GGGGGCGGACGTCGTTCGGAGCAGCTGGCACTACCATCGACCCAACCGGCTCCATCGCAGCGCATTCTGTCGATTACCGAGGTGCCGGACAATGGGTGCGAATCGTGCGGCAACCCGAGCGATACGGCGATCTGCAGCGCATGCAGCAGCAACAACCAGCACAGCGGCAGCCACGATCAA---CAGCAGCAGCAGCAACAATCGTCCCGATCGCAGCAAGCACCGACAAAAGCAGCCGGAGGACGCAACCATCATCGACAACAGTCCGCTGCCGTGAACAACGGTGGCCAAATCACAGCCCGGCGAGCGATCCGATCGCCGGCCTCGTCCCCACTGAGCATGGCCAGTTCGCCAGTCAGTGGCACGAACCAACACCACCACCATCACATTACTACAAGCGTGCATCCCCATCCGTACAACGCGTCCGGGCCGGAAATCTCGACCACTGAAGGGCCCGTCATCATCATCAGCGCCCTCTTCGTCCCACACACACTATCAGTAATCTGGAGCTCGTGCACTATTCAGCGGATGGTTTCGTATGGGGGGCGGATTGAAGGAGTAGTGTGTGGGCTGAAATGGCAGCACACACACACACACACACACAGTTTCAGTAAGCACAGTTTAACTT]

[+] EMBL BM625700             [CCGCTTCCCTGAAAACAC TGAAGTAAATACATCTCGTGAGACGTCGACGAAAAAGCAA  GAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGAAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGAT GGGTGGGGTTGGCGGCGGGTTGGAAAGCATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGACTGCTG AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAAATGGCCATCGGGCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM652465             [       CC GCCCACGCGTCCGGTAAATACATCTCGTGAGACGTCGACGAAAAAGCAAGTGAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGTAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM648030             [       CC GCGGACGCGTGGGGTAAATACATCTCGTGAGACGTCGACGAAAAAGCAAGTGAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGAAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGAT GGGTGGGGTTGGCGGCGGGTTGGAAAGCATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGACTGCTG AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAAATGGCCATCGGGCATCACA TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACC GGGGTGCAGGAGGAACGGCAGGACTTTATCAACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM576640             [                cCGTGAAGTAAATACATCTCGTGAGACGTCGACGAAAAAGCAAGTGAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGAAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGATGGGGTGGGGTTGGCGGCGGGTTGGAAAGCATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGACTGCTGAAGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACCGGGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAAATGGCCATCGGGCATCACA TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACC GGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM653355             [                   ccgAGTAAATACATCTCGTGAGACGTCGACGAAAAAGCAAGTGAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGAAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGATGGGGTGGGGTTGGCGGCGGGTTGGAAAGCATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGACTGCTGAAGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAAATGGCCATCGGGCATCACATTCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACCGGGGGTGCAGGAGGAACGGCAGGACTTTATCAACCTGGACGACGAAGGAGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM577779             [                    ccgGTAAATACATCTCGTGAGACGTCGACGAAAAAGCAAGTGAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGAAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGAT GGGTGGGGTTGGCGGCGGGTTGGAAAGCATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGACTGCTG AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAAATGGCCATCGGGCATCACA TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM641104             [                        ccgATACATCTCGTGAGACGTCGACGAAAAAGCAAGTGAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGAAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGAT GGGTGGGGTTGGCGGCGGGTTGGAAAGCATCGCCGCCGGGCC G TTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGACTGCTG AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACGAAAAAAAATGGCCATCGGGCATCACA TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACC GGGGTGCAGGAGGAACGGCAGGACTTTATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM592024             [                          ccgcggacgCGTG GGCGTCGACGAAAAAGCAAGTGAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGTAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGAT GGGTGGGGTCGGCGGCGGGTTGGAAAGTATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGACTGCTG AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAGATGGCCATCGGGCATCACA TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACC GGGGTGCAGGAGGAACGGCAGGACTTTATCAACCTGGACGACG Aagg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM617900             [                                       ccgCGTCGACGAAAAAGCAAGTGAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGTAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGAT GGGTGGGGTCGGCGGCGGGTTGGAAAGTATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGACTGCTG AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAGATGGCCATCGGGCATCACA TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACC GGGGTGCAGGAGGAACGGCAGGACTTTATCAACCTGGACGACG AGGAGGCGGCAAGACTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACCGTGCTGGGCGGTCACGGGGGGCGGACGTCGTTCGGAGCAGCTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM601876             [                                                    ccgGCAAGTGAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGAAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGAT GGGTGGGGTTGGCGGCGGGTTGGAAAGCATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGACTGCTG AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAAATGGCCATCGGGCATCACA TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACC GGGGTGCAGGAGGAACGGCAGGACTTTATCAACCTGGACGACG AGGAGGCGG AAGACTTCGATCGCGAGTTCCAGGCCAAGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX628997             [                                                                 AAGCGCGTGTATTCCTTCGTTTGCTGAGTAAATATATTGAACAGCTTGCTAGCCCAATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGAACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGAT GGGTGGGGTCGGCGGCGGGTTGGAAAGTATCGCCGCCGGGCCTGCATTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGGCTGCTG AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAGATGGCCATCGGGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM616095             [                                                                                                                                                                                                                                                          ccgCGCTGTTTTCCGACCCGTTCGGTATGAT GGGTGGGGTCGGCGGCGGGTTGGAAAGTATCGCCGCCGGGCCTGCATTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGGCTGCTG AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAACGGGTCCCCGGCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAGATGGCCATCGGGCATCACA TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACC GGGGTGCAGGAGGAACGGCAGGACTTTATCAACCTGGACGACG AGGAGGCGG AAGACTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM618281             [                                                                                                                                                                                                                                                                                                                                                                        ccgGCCGCCGACCATGAACCGACTGCTG AGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAAC GGTCC   GCAGGTGTACCAGGCCACGTCGAGCACGCGCACC GGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACG AAAAAGATGGCCATCGGGCATCACA TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACC GGGGTGCAGGAGGAACGGCAGGACTTTATCAACCTGGACGACG AGGAGGCGG AAGACTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACCGTGCTGGGCGGTCAC GGGGGCGGACGTCGTTCGGAGCAGCTGGCACTACCATCGACCCAACCGGCTCCATCGCAGCGCATTCTGTCGATTACCGAGGTGCCGGACAATGGGTGCGAATCGTGCGGCAACCCGAGCGATACGGCGATCTGCAGCGCATGCAGCAGCAACAACCAGCACAGCGGCAGCCACGATCAA   CAGCAGCAGCAGCAACAATCGTCCCGATCGCAGCAAGCACCGACAAAAGCAGCCGGAGGACGCAACCATCATCGACAACAGTCCGCTGCCGTGAACAACGGTGGCCAAA                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM619870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccGGATAGCCGCACCGGCACG AAAAAAATGGCCATCGGGCATCACA TCGGCGAGCGGGCCCACATCATCGAGCGGGAGCAGAACATCTCCACC GGGGTGCAGGAGGAACGGCAGGACTTTATCAACCTGGACGACG AGGAGGCGG AAGACTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACCGTGCTGGGCGGTCAC GGGGGCGGACGTCGTTCGGAGCAGCTGGCACTACCATCGACCCAACCGGCTCCGTCGCAGCGCATTCTGTCGATTACCGAGGTGCCGGACAATGGGTGCGAATCGTGCGGCAACCCGAGCGATACGGCGATCTGCAGCGCATGCAGCAGCAACAACCAGCACAGCGGCAGCCACGATCAA   CAGCAGCAGCAGCAACAATCGTCCCGATCGCAGCAAGCACCGACAAAAGCAGCCGGAGGACGCAACCATCATCGACAACAGTCCGCTGCCGTGAACAACGGTGGCCAAATCACAGCCCGGCGAGCGATCCGATCGCCGGCCTCGTCCCCACTGAGCATGGCCAGTTCGCCAGTCAGTGGCACGAACCAACACCACCACCATCACATTACTACAAGCGTGCATCCCCATCCGTACAACGCGTCCGGGCCGGAAATCTCGACCACTGAAGGGCCCGTCATCA                                                                                                                                                                     ]
[+] EMBL BX606647             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TCGTGCGGCAACCCGAGCGATACGGCGATCTGCAGCGCATGCAGCAGCAACAACCAGCACAGCGGCAGCCACGATCAACAGCAGCAGCAGCAGCAACAATCGTCCCGATCGCAGCAAGCACCGACAAAAGCAGCCGGAGGACGCAACCATCATCGACAACAGTCCGCTGCCGTGAACAACGGTGGCCAAATCACAGCCCGGCGAGCGATCCGATCGCTGGCCTCGTCCCCACTGAGCATGGCCAGTTCGCCAGTCAGTGGCACGAACCAACACCACCACCATCACATTACTACAAGCGTGCATCCCCATCCGTACAACGCGTCC GGCCGGAAATCTCGACCACTGAAGGGCCCGTCATCATCATCAGCGCCCTCTTCGTCCCACACACACTATCAGTAATCTGGAGCTCGTGCACTATTCAGCGGATGGTTTCGTATGGGGGGCGGATTGAAGGAGTAGTGTGTGGGCTGAAATGGCAGCACACACACACACACACACACAGTTTCAGTAAGCACAGTTTAACTT]


>consensus_9409#0 CCGCTTCCCGCAAACGCGTGAAGTAAATACATCTCGTGAGACGTCGACGAAAAAGCAAGT GAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGAAAATATATTGAACAGCTTGCTAGCCCA ATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGA ACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCA ACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGATGGGTGGGGTTGGCGGCGGGT TGGAAAGCATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCA TGCCGCCGACCATGAACCGACTGCTGAGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACT GCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAACGGTCCGCAGGTGTACCAGGCCA CGTCGAGCACGCGCACCGGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATA GCCGCACCGGCACGAAAAAAATGGCCATCGGGCATCACATCGGCGAGCGGGCCCACATCA TCGAGCGGGAGCAGAACATCTCCACCGGGGTGCAGGAGGAACGGCAGGACTTTATCAACC TGGACGACGAGGAGGCGGAAGACTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACCGTGC TGGGCGGTCACGGGGGCGGACGTCGTTCGGAGCAGCTGGCACTACCATCGACCCAACCGG CTCCATCGCAGCGCATTCTGTCGATTACCGAGGTGCCGGACAATGGGTGCGAATCGTGCG GCAACCCGAGCGATACGGCGATCTGCAGCGCATGCAGCAGCAACAACCAGCACAGCGGCA GCCACGATCAACAGCAGCAGCAGCAACAATCGTCCCGATCGCAGCAAGCACCGACAAAAG CAGCCGGAGGACGCAACCATCATCGACAACAGTCCGCTGCCGTGAACAACGGTGGCCAAA TCACAGCCCGGCGAGCGATCCGATCGCCGGCCTCGTCCCCACTGAGCATGGCCAGTTCGC CAGTCAGTGGCACGAACCAACACCACCACCATCACATTACTACAAGCGTGCATCCCCATC CGTACAACGCGTCCGGGCCGGAAATCTCGACCACTGAAGGGCCCGTCATCATCATCAGCG CCCTCTTCGTCCCACACACACTATCAGTAATCTGGAGCTCGTGCACTATTCAGCGGATGG TTTCGTATGGGGGGCGGATTGAAGGAGTAGTGTGTGGGCTGAAATGGCAGCACACACACA CACACACACACAGTTTCAGTAAGCACAGTTTAACTT



consensusID : consensus_9409#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 514
fasta sequence
                              [GCAAGAATCGCCACGAGNTGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGATGGGTGGGGTTGGCGGTGGGTTGGAAAGTATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGGCTGCTGAGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAACGGTCCGCAGGTGTACCAGGCCACGTCGAGCACGCGCACCGGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACGAAAAAGATGGCCATCGGGCATCACATCGGCGAGCGGGCACACATCATCGAGCGGGAGCAGAACACCTCCACCGGGGTGCAGGAGGAACGGCAGGATTTTATCAAACCTGGACGACCCAGGAGGCGGAAGACTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACC]

[+] EMBL BX468813             [GCAAGAATCGCCACGAGNTGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGATGGGTGGGGTTGGCGGTGGGTTGGAAAGTATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGGCTGCTGAGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAACGGTCCGCAGGTGTACCAGGCCACGTCGAGCACGCGCACCGGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACGAAAAAGATGGCCATCGGGCATCACATCGGCGAGCGGGCACACATCATCGAGCGGGAGCAGAACACCTCCACCGGGGTGCAGGAGGAACGGCAGGATTTTATCAAACCTGGACGACCCAGGAGGCGGAAGACTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACC]


>consensus_9409#1 GCAAGAATCGCCACGAGNTGATGCGCCACATGAGCAACATGCTGAATTCGCTGTTTTCCG ACCCGTTCGGTATGATGGGTGGGGTTGGCGGTGGGTTGGAAAGTATCGCCGCCGGGCCTG CGTTCGGGATGCGCCACAACGCGATGATGCCGTTCATGCCGCCGACCATGAACCGGCTGC TGAGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACTGCAGCAGCAGCGTCATCTCGATGA CGTCCGGCCCGAACGGTCCGCAGGTGTACCAGGCCACGTCGAGCACGCGCACCGGCCCGG GCGGCATCAAGGAGACGCGCAAAACCGTACAGGATAGCCGCACCGGCACGAAAAAGATGG CCATCGGGCATCACATCGGCGAGCGGGCACACATCATCGAGCGGGAGCAGAACACCTCCA CCGGGGTGCAGGAGGAACGGCAGGATTTTATCAAACCTGGACGACCCAGGAGGCGGAAGA CTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9409#0      CCGCTTCCCGCAAACGCGTGAAGTAAATACATCTCGTGAGACGTCGACGAAAAAGCAAGT 60
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      GAAAAAGCGCGTGTATTCCTTCGTTTGCTGAGAAAATATATTGAACAGCTTGCTAGCCCA 120
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      ATACCAGTGTCGCGTGTTAAACAACCGAACGGAACAAAATGTCGCTTTTCGGGATGATGA 180
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      ACGATATAGAGGAAGATCCTATTTTTGGCCATCATATGCGTTCGATGCGCCACATGAGCA 240
consensus_9409#1      ------------------------GCAAGAATCGCCACGAGNTGATGCGCCACATGAGCA 36
                                                    ***          *****************

consensus_9409#0      ACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGATGGGTGGGGTTGGCGGCGGGT 300
consensus_9409#1      ACATGCTGAATTCGCTGTTTTCCGACCCGTTCGGTATGATGGGTGGGGTTGGCGGTGGGT 96
                      ******************************************************* ****

consensus_9409#0      TGGAAAGCATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCA 360
consensus_9409#1      TGGAAAGTATCGCCGCCGGGCCTGCGTTCGGGATGCGCCACAACGCGATGATGCCGTTCA 156
                      ******* ****************************************************

consensus_9409#0      TGCCGCCGACCATGAACCGACTGCTGAGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACT 420
consensus_9409#1      TGCCGCCGACCATGAACCGGCTGCTGAGTGTGGGCGGCCCGGCCGACGGTCCGTCGTACT 216
                      ******************* ****************************************

consensus_9409#0      GCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAACGGTCCGCAGGTGTACCAGGCCA 480
consensus_9409#1      GCAGCAGCAGCGTCATCTCGATGACGTCCGGCCCGAACGGTCCGCAGGTGTACCAGGCCA 276
                      ************************************************************

consensus_9409#0      CGTCGAGCACGCGCACCGGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATA 540
consensus_9409#1      CGTCGAGCACGCGCACCGGCCCGGGCGGCATCAAGGAGACGCGCAAAACCGTACAGGATA 336
                      ************************************************************

consensus_9409#0      GCCGCACCGGCACGAAAAAAATGGCCATCGGGCATCACATCGGCGAGCGGGCCCACATCA 600
consensus_9409#1      GCCGCACCGGCACGAAAAAGATGGCCATCGGGCATCACATCGGCGAGCGGGCACACATCA 396
                      ******************* ******************************** *******

consensus_9409#0      TCGAGCGGGAGCAGAACATCTCCACCGGGGTGCAGGAGGAACGGCAGGACTTTATCAA-C 659
consensus_9409#1      TCGAGCGGGAGCAGAACACCTCCACCGGGGTGCAGGAGGAACGGCAGGATTTTATCAAAC 456
                      ****************** ****************************** ******** *

consensus_9409#0      CTGGACGACG-AGGAGGCGGAAGACTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACCGT 718
consensus_9409#1      CTGGACGACCCAGGAGGCGGAAGACTTCGATCGCGAGTTCCAGGCCAAGGCGCGCACC-- 514
                      *********  ***********************************************  

consensus_9409#0      GCTGGGCGGTCACGGGGGCGGACGTCGTTCGGAGCAGCTGGCACTACCATCGACCCAACC 778
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      GGCTCCATCGCAGCGCATTCTGTCGATTACCGAGGTGCCGGACAATGGGTGCGAATCGTG 838
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      CGGCAACCCGAGCGATACGGCGATCTGCAGCGCATGCAGCAGCAACAACCAGCACAGCGG 898
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      CAGCCACGATCAACAGCAGCAGCAGCAACAATCGTCCCGATCGCAGCAAGCACCGACAAA 958
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      AGCAGCCGGAGGACGCAACCATCATCGACAACAGTCCGCTGCCGTGAACAACGGTGGCCA 1018
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      AATCACAGCCCGGCGAGCGATCCGATCGCCGGCCTCGTCCCCACTGAGCATGGCCAGTTC 1078
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      GCCAGTCAGTGGCACGAACCAACACCACCACCATCACATTACTACAAGCGTGCATCCCCA 1138
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      TCCGTACAACGCGTCCGGGCCGGAAATCTCGACCACTGAAGGGCCCGTCATCATCATCAG 1198
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      CGCCCTCTTCGTCCCACACACACTATCAGTAATCTGGAGCTCGTGCACTATTCAGCGGAT 1258
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      GGTTTCGTATGGGGGGCGGATTGAAGGAGTAGTGTGTGGGCTGAAATGGCAGCACACACA 1318
consensus_9409#1      ------------------------------------------------------------
                                                                                  

consensus_9409#0      CACACACACACACAGTTTCAGTAAGCACAGTTTAACTT 1356
consensus_9409#1      --------------------------------------
                                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)