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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9410#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1441 fasta sequence
[CCGCCCACGCGTCCGCTGCGC-AGAAG-TATCGGTCGG-CGGCTGGGTGGGTGTGTGTATGTTGGTTTGTGGCGTGTCCTGCAGTTGCAGTGCCGTGCTTGTTGTAATTGTTGTTGACGAAAAGTGGACCAACCGAATCCATCTTCTTCCGCCCGACCCTGATCGCCGGCGGTGTGTCCCTTTCACCTGCACAAACGCTTTCCGCTATCGGCACACACTAGGTTGATATTGAACTTTCTCATTTAAAATAGATCCACATCCACAAGACGACATCGAGAATTCTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAAGGAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGCTGAACTGC--CACCAGCAGCTCGTCGCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGG-ACGTAGTGGTGCGCGATCTGCTCGGGCCGGGCGGGGTACCGCC-GG-ACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGAGCGGATTCCAGCCGATGGACATTGCGTCGGCGATACGCGGTATACCGGAGGTGCCCGGGATGAAGTCGTGCATCGGAAACCTGGTGCGGCACGGGTTCGATGTGATCATCATAAGCGATTCCAACTCGGAGTTCATACGGCTGTGGAACGATTTCAACGACATCGGCTCGTACATACACAGCGTGTTCACAAATCCGGCCCGGTTCGATGGCAGCGGGCTGCTGGAGCTGCGCCCGTACCACTACCAAACGGAGTGCTCGCTCAGCTCGAAGAACCTTTGCAAGGGCAAGATAATGGAAGAGT-TCCTGCGCCGCCAGCACGACGAGCGGCAGGTCGATTACGAGAAGGTGTTCTACGCCGGGGACGGCAAGAACGACGTGTGTCCGATGTTGCGGCTCGGCAGCAATGGGTACGCCTGTGCCAGACGTGGCTACTCCTGCCATGATGCGCTGCAGGGTGCCATCGGGAAGCTGGAGCACCCGTACGTGGCCAAGGTACTGCAGTGGACGGATGGGCACGAGCTGAACGACCTTATATGGACTGAACTGGAGGACTGATCTTTACAGCGCCGTACTGTTTTCACCCTGCTCAGCACACCGGTTGCCGAAATGCTATTGCATGTGTGCCGGTGTGCTGTGGTTGGCATTTTTTACAGACTCCATAATGATGGTGAATATACTAC-ATTTTGTTTCATTTTTTTTTCCTAATAAAATACCGTTGCAAACGAAA]
[+] EMBL BM652392 [CCGCCCACGCGTCCGCTGCGCAAGAAGCTATCGGTCGGTCGGCTGGGTGGGTGTGTGTATGTTGGTTTGTGGCGTGTCCTGCAGTCGCAGTGCCGTGCTTGTTGTAGTTGTTGTTGACGAAAAGTGGACCAACCGAATCCATCTTCTTCCGCCCGACCCTGATCGCCGGCGGTGTGTCCCTTTCACCTGCACAAACGCTTTCCGCTATCGGCACACACTAGGTTGATATTGAACTTTCTCATTTAAAATAGATCCACATCCACAAGACGACATCGAGAATTCTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAAGGAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGCTGAACTGC TACCAGCAGCTCGTCGCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGGCACGTAGTGGTGCGTGATCTGCTCGGGCCGGGCGGAGTACCGCC GGAACGTGCAAAGCATACTGCGCTCCTGCGGCTGGAT ]
[+] EMBL CNS08E4J [ CGC AGAAG TATCGGTCGG CGGCTGGGTGGGTGTGTGTATGTTGGTTTGTGGCGTGTCCTGCAGTTGCAGTGCCGTGCTTGTTGTAATTGTTGTTGACGAAAAGTGGACCAACCGAATCCATCTTCTTCCGCCCGACCCTGATCGCCGGCGGTGTGTCCCTTTCACCTGCACAAACGCTTTCCGCTATCGGCACACACTAGGTTGATATTGAACTTTCTCATTTAAAATAGATCCACATCCACAAGACGACATCGAGAATTCTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAA GAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGCTGAACTGCCACACCACCAGCTCGTCGCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGG ACGTAGTGGTGCGCGATCTGCTCGGGGCAGGCGGGGTA CGCG GA ACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGAGCGGATTCCAGCCGATGGACATTGCGTCGGCGATACGCGGTATACCGGA GTGCCCGGGATGAAGTCGTGCATCGGAAACCTGGTGCGGCACGGGTTCGATGTGATCATCATAAGCGATTCCAACTCGGAGTTCATACGGCTGTGGAACGATTTCAACGACATCGGCTCGTACATACACAGCGTGTTCACAAATCCGGCCCGGTTCGATGGCAGCGGGCTGCTGGAGCTGCGCCCGTACCACTA ]
[+] EMBL CNS08PJQ [ CTGGGTGGGTGTGTGTATGTTGGTTTGTGGCGTGTCCTGCAGTTGCAGTGCCGTGCTTGTTGTAATTGTTGTTGACGAAAAGTGGACCAACCGAATCCATCTTCTTCCGCCCGACCCTGATCGCCGGCGGTGTGTCCCTTTCACCTGCACAAACGCTTTCCGCTATCGGCACACACTAGGTTGATATTGAACTTTCTCATTTAAAATAGATCCACATCCACAAGACGACATCGAGAATTCTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAA GAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGCTGAACTGCCACACCACCAGCTCGTCGCGACCTGTACTCGCTTGGGGAGTGAGTCTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGG ACGTAGTGGTGCGCGATCTGCTCGGGCCAGGCGGGGTACCGCCGGG ACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGAGCGGATTCCAGCCGATGGACATTGCGTCGGCGATACGCGGTAT ]
[+] EMBL BM624102 [ ccgCACATCCACAAGACGACATCGAGAATTCTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAAGGAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGTTGAAGTGC CACCAGCAGCTCATCGCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGG ACGTAGTGGTGCGCGATCTGCTCGGGCCGGGCGGGGTACCGCC GG ACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGGGCGGCTTCCAGCCGATGGACATTGCGTCGGCGATACGCGGCATACCGGAGGTGCCCGGGATGAAGTCGTGCATCGGCAACCTGGTGCGGCACGGGTTCGACGTGATCATCATAAGCGATTCCAACTCGGAGTTCATACGGCTGTGGAACGATTTCAACGACATCGGCTCGTACATACACAGCGTGTTCACAAATCCGGCCCG ]
[+] EMBL BX628606 [ CACACGGGTTTACCGAAGGAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGTTGAAGTGC CACCAGCAGCTCATCGCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGG ACGTAGTGGTGCGCGATCTGCTCGGGCCGGGCGGGGTACCGCC GG ACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGGGCGGCTTCCAGCCGATGGACATTGCGTCGGCGATACGCGGCATACCGGAGGTGCCCGGGATGAAGTCGTGCAT ]
[-] EMBL CNS08E4K [ CGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAAAACGG ACGTAGTGGTGCGCGATCTGCTCGGGCCAGGCGGGGTACCGCC GG ACGTGCAAAGCATACTGCGCT CTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGAGCGGATTCCAGCCGATGGACATTGCGTCGGCGATACGCGGTATACCGGAGGTGCCCGGGATGAAGTCGTGCATCGGAAACCTGGTGCGGCACGGGCCCCATGTGATCATCATAAGCGATTCCAACTCGGAGTTCATACGGCTGTGGAACGATTTCAACGACATCGGCTCGTACATACACAGCGTGTTCACAAATCCGGCCCGGTTCGATGGCAGCGGGCTGCTGGAG TGCGCCCGTACCACTACCAAACGGAGTGCTCGCTCAGCTCGAAGAACCTTTGCAAGGGCAAGATAATGGAAGAGT TCCTGCGCCGCCAGCACGACGAGCGGCAGGTCGATTACGAGAAGGTGTTCTACGCCGGGGACGGCAAGAACGACGTGTGTCCGATGTTGCGGCTCGGCAGCAATGGGTACGCCTGTGCCAGACGTGGCTACTCCTGCCATGATGCGCTGCAGGGTGCCATCGGGAAGCTGGAGCACCCGTACGTGGCCAAGGTACTGCAGTGGACGGATGGGCACGAGCTGAACGACCTTATATGGACTGAACTGGAGGACTGATCTTTACAGCGCCGTACTGTTTTCACCCTGCTCAGCACACCGGTTGCCGAAATGCTATTGCATGTGTGCCGGTGTGCTGTGGTTGGCATTTTTTACAGACTCCATAATGATGGTGAATATACTAC ATTTTGTTTCATTTTTTTTTCCTAATAA ]
[+] EMBL BM580260 [ cCGCGGAC GCGTGGGCCGGGCGGGGTACCGCC GG ACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGGGCGGCTTCCAGCCGATGGACATTGCGTCGGCGATACGCGGCATACCGGAGGTGCCCGGGATGAAGTCGTGCATCGGCAACCTGGTGCGGCACGGGTTCGACGTGATCATCATAAGCGATTCCAACTCGGAGTTCATACGGCTGTGGAACGATTTCAACGACATCGGCTCGTACATACACAGCGTGTTCACAAATCCGGCCCGGTTCGATGGCAGCGGGCTGCTGGAGCTGCGCCCGTACCACTACCAGACGGAGTGCTCGCTCAGCTCGAAGAACCTTTGCAAGGGCAAGATAATGGAAGAGT TCCTGCGCCGGCAGCACGACGAGCGGCAGGTCGATTACGAGAAGGTGTTCTACGCCGGGGACGGCAAGAACGACGTGTGTCCGATGTTGCGGCTCGGCAGCAATGGGTACGCCTGTGCCAGACGTGGCTACTCCTGCCATGATGCGCTGC ]
[-] EMBL CNS08PJR [ gaCTGCGCCCGTACCACTACCAAACGGAGTGCTCGCTCAGCTCGAAGAACCTTTGCAAGGGCAAGATAATGGAAGAGTGTCCTGCGCCGCCAGCACGACGAGCGGCAGGTCGATTACGAGAAGGTGTTCTACGCCGGGGACGGCAAGAACGACGTGTGTCCGATGTTGCGGCTCGGCAGCAATGGGTACGCCTGTGCCAGACGTGGCTACTCCTGCCATGATGCGCTGCAGGGTGCCATCGGGAAGCTGGAGCACCCGTACGTGGCCAAGGTACTGCAGTGGACGGATGGGCACGAGCTGAACGACCTTATATGGACTGAACTGGAGGACTGATCTTTACAGCGCCGTACTGTTTTCACCCTGCTCAGCACACCGGTTGCCGAAATGCTATTGCATGTGTGCCGGTGTGCTGTGGTTGGCATTTTTTACAGACTCCATAATGATGGTGAATATACTACTATTTTGTTTCATTTTTTTTTCCTAATAA ]
[-] EMBL CNS09NSR [ TCTTTACAGCGCCGTACTGTTTTCCCCCTGCTCAGCACACCGGTTGCCGAAATGCTATTGCATGTGTGCCGGTGTGCTGTGGTTGGCATTTTTTACAGACTCCATAATGATGGTGAATATACTAC ATTTTGTTTCAATTTTTTTTCCTAATAAAATACCGTTGCAAACGAAA]
consensusID : consensus_9410#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 596 fasta sequence
[CCGCTGCTGCGCAAGAAGCTATCGGTCGGTCGGCTGGGTGGGTGTGTATCCACATCCACAAGACGACATCGAGAATTCTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAAGGAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGCTGAACTGCCACACCACCAGCTCGTCGCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGGACGTAGTGGTGCGCGATCTGCTCGGGCCGGGCGGGGTACCGCCGGACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGAGCGGATTCCAGCCGATGGACATTGCGTCGGCGATACGCGGTATACCGGAGGTGCCCGGGATGAAGTCGTGCATCGGAAACCTG]
[+] EMBL BM655349 [CCGCTGCTGCGCAAGAAGCTATCGGTCGGTCGGCTGGGTGGGTGTGTATCCACATCCACAAGACGACATCGAGAATTCTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAAGGAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGCTGAACTGCCACACCACCAGCTCGTCGCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGGACGTAGTGGTGCGCGATCTGCTCGGGCCGGGCGGGGTACCGCCGGACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGAGCGGATTCCAGCCGATGGACATTGCGTCGGCGATACGCGGTATACCGGAGGTGCCCGGGATGAAGTCGTGCATCGGAAACCTG]
consensusID : consensus_9410#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence
[CCGCCCACGCGTCCGAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGGACGTAGTGGTGCGCGATCTGCTCGGGCCGGGCGGGGTACCGCCGGACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGGGCGGCTTCCAGCCGATGGACATTGCGTCGGCGATACGCGGCATACCGGAGGTGCCCGGGATGAAGTCGTGCATCGGCAACCTGGTGCGGCACGGGTTCGACGTGATCATCATAAGCGATTCCAACTCGGAGTTCATACGGCTGTGGAACGATTTCAACGACATCGGCTCGTACATACACAGCGTGTTCACAAATCCGGCCCGGTTCGATGGCAGCGGGCTGCTGGAGCTGCGCCCGTACCACTACCAGACGGAGTGCTCGCTCAGCTCGAAGAACCTTTGCAAGGGCAAGATAATGGAAGAGTTCCTGCGCCGGCAGCACGACGAGCGGCAGGTCGATTACGAGAAGG]
[+] EMBL BM643270 [CCGCCCACGCGTCCGAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGGACGTAGTGGTGCGCGATCTGCTCGGGCCGGGCGGGGTACCGCCGGACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGGGCGGCTTCCAGCCGATGGACATTGCGTCGGCGATACGCGGCATACCGGAGGTGCCCGGGATGAAGTCGTGCATCGGCAACCTGGTGCGGCACGGGTTCGACGTGATCATCATAAGCGATTCCAACTCGGAGTTCATACGGCTGTGGAACGATTTCAACGACATCGGCTCGTACATACACAGCGTGTTCACAAATCCGGCCCGGTTCGATGGCAGCGGGCTGCTGGAGCTGCGCCCGTACCACTACCAGACGGAGTGCTCGCTCAGCTCGAAGAACCTTTGCAAGGGCAAGATAATGGAAGAGTTCCTGCGCCGGCAGCACGACGAGCGGCAGGTCGATTACGAGAAGG]
consensusID : consensus_9410#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 509 fasta sequence
[CCCCGAGGTNAAGACGACATCGAGAATCTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAAGGAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGTTGAAGTGCCACCAGCAGCTCATCGCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGGACGTAGTGGTGCGCGATCTGCTCGGGCCGGGCGCGGGTACCGCCGGACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGGGCGGCTTCCAGCCGATGGACATTGCGTCGGCGATACGCGGCATACCG]
[+] EMBL AL932098 [CCCCGAGGTNAAGACGACATCGAGAATCTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAAGGAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGTTGAAGTGCCACCAGCAGCTCATCGCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGGACGTAGTGGTGCGCGATCTGCTCGGGCCGGGCGCGGGTACCGCCGGACGTGCAAAGCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGGGCGGCTTCCAGCCGATGGACATTGCGTCGGCGATACGCGGCATACCG]
[+] EMBL CNS09BCW [ TGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGTTGAAGTGCCACCAGCAGCTCATCGCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGACGCGGCA CCGCGTAAGGATGTTCTCCAGCAGTGGGCGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGGACGTATGGGTGCGCGATCTGCTCGGGCCGGGCG GGGTTCCGCCGGATGTGCAAAGCATACTGCGCTC ]
consensusID : consensus_9410#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 271 fasta sequence
[CAGCAGATCGGCCCAGGGGCTTTAGTGACAGCAAGCGACGCGGCANCCGCGTAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGGGACGTAGTGGGTGCGCGATCTGCTCGATGGCCGGGCGGGGTACCAGCGGACGTGCAAAGCGAGTACTGCGGCTCCTGACGGCTGGAATCCCGGTACGATGTCAGGCGCGAGTTGTATCCGGGCGTGNGTGCCAACCA]
[+] EMBL BX466404 [CAGCAGATCGGCCCAGGGGCTTTAGTGACAGCAAGCGACGCGGCANCCGCGTAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACAACACGGGACGTAGTGGGTGCGCGATCTGCTCGATGGCCGGGCGGGGTACCAGCGGACGTGCAAAGCGAGTACTGCGGCTCCTGACGGCTGGAATCCCGGTACGATGTCAGGCGCGAGTTGTATCCGGGCGTGNGTGCCAACCA]
consensusID : consensus_9410#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 201 fasta sequence
[CCCTCATCGCCGGCGGTCTGTCCCTTTCACCTGCACAAACGCTTTCCGCTATCGGCACACACTAGGTTGATATTGAACTTTNNNNNNNNNNNNTAGATCCACATCCACAAGACGACATCGAGAATTCTCCGTCGCAGCCGCGGGCCACACACGGGTTACCGAAGAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCC]
[+] EMBL AGA283120 [CCCTCATCGCCGGCGGTCTGTCCCTTTCACCTGCACAAACGCTTTCCGCTATCGGCACACACTAGGTTGATATTGAACTTTNNNNNNNNNNNNTAGATCCACATCCACAAGACGACATCGAGAATTCTCCGTCGCAGCCGCGGGCCACACACGGGTTACCGAAGAGATGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCC]
consensusID : consensus_9410#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 133 fasta sequence
[TGTGGCGTGTCTGCAGTCGCAGTGCCGTGCTTGTTGTAATTGTTGTTGACGAAAAGTGGACCAACCGAATCCATCTTCTTCCGCACGACCCTGATCGCCCGGCGGATCCACATCCACAAGACGACATCGAGAA]
[+] EMBL CNS09NSQ [TGTGGCGTGTCTGCAGTCGCAGTGCCGTGCTTGTTGTAATTGTTGTTGACGAAAAGTGGACCAACCGAATCCATCTTCTTCCGCACGACCCTGATCGCCCGGCGGATCCACATCCACAAGACGACATCGAGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 ------------------------------------------------------------
consensus_9410#1 CCGCTGCTGCGCAAGAAGCTATCGGTCGGTCGGCTGGGTGGGTGTGTATCCACATCCACA 60
consensus_9410#3 -------------------------------------------------CCCCGAGGTNA 11
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 ------------------------------------------------------------
consensus_9410#1 AGACGACATCGAGAATTCTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAAGGAGA 120
consensus_9410#3 AGACGACATCGAGAAT-CTCCGTCGCAGCCGCGGGCCACACACGGGTTTACCGAAGGAGA 70
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 ------CCGCCCACGCGTCCGCTGCGCAGAAGTATCGGTCGGCGGCTGGGTGGGTGTGTG 54
consensus_9410#1 TGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTT 180
consensus_9410#3 TGTTCTGCAGCATCGGCAAAGCGTCCGTCGGTCCAACTTTACCATTCATGAATGCAGTTT 130
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 TATGTTGGTTTGTGGCGTGTCCTGCAGTTGCAGTGCCGTGCTTGTTGTAATTGTTGTTGA 114
consensus_9410#1 CGGGCTGAACTGCCACACCACCAGCTCGTCGCGACCTGTACTCGCTTGGGGAGTGAGTGT 240
consensus_9410#3 CGGGTTGAAGTGCCA--CCAGCAGCTCATCGCGACCTGTACTCGCTTGGGGAGTGAGTGT 188
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ---------------------------------------CCCTCATCGCCGGCGGTCTGT 21
consensus_9410#6 ------------------------------TGTGGCGTGTCTGCAGTCGCAGTGCCGTGC 30
consensus_9410#0 CGAAAAGTGGACCAACCGAATCCATCTTCTTCCGCCCGACCCTGATCGCCGGCGGTGTGT 174
consensus_9410#1 TTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGAC 300
consensus_9410#3 TTCTATTCAGTGGTTCCGTGGCACACAAACCAAACACGGCAAACAGTGACAGCAAGCGAC 248
consensus_9410#2 --------------------------CCGCCCACGCGTCCGAACAGTGACAGCAAGCGAC 34
consensus_9410#4 ------------------CAGCAGATCGGCCCAGGGGCTT---TAGTGACAGCAAGCGAC 39
* * *
consensus_9410#5 CCCTTTCACCTGC-ACAAACGCTTTCCGCTATCGGCACACACT--AGGTTGATATTGAAC 78
consensus_9410#6 TTGTTGTAATTGTTGTTGACGAAAAGTGG-ACCAACCGAATCC--ATCTTCTTCCGCACG 87
consensus_9410#0 CCCTTTCACCTGC-ACAAACGCTTTCCGCTATCGGCACACACT--AGGTTGATATTGAAC 231
consensus_9410#1 GCGGCAGCCGCGT-AAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTG 359
consensus_9410#3 GCGGCAGCCGCGT-AAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTG 307
consensus_9410#2 GCGGCAGCCGCGT-AAGGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTG 93
consensus_9410#4 GCGGCANCCGCGT-A-GGATGTTCTCCAGCAGTGGACGGCTGCTGAAGCGGCTGGCCGTG 97
* * * * * *
consensus_9410#5 TTTNNNNNNNNNNNNTAGATCCACATCCACAAGACGACATCGAGAAT-TCTCCGTCGCAG 137
consensus_9410#6 ACCCTGATCGCCCGGCGGATCCACATCCACAAGACGACATCGAGAA-------------- 133
consensus_9410#0 TTTCTCATT-TAAAATAGATCCACATCCACAAGACGACATCGAGAAT-TCTCCGTCGCAG 289
consensus_9410#1 CTGGATTTCGATCACACCGTCTGCGAACACAACACGG-ACGTAGTGG-TGCGCGATCTGC 417
consensus_9410#3 CTGGATTTCGATCACACCGTCTGCGAACACAACACGG-ACGTAGTGG-TGCGCGATCTGC 365
consensus_9410#2 CTGGATTTCGATCACACCGTCTGCGAACACAACACGG-ACGTAGTGG-TGCGCGATCTGC 151
consensus_9410#4 CTGGATTTCGATCACACCGTCTGCGAACACAACACGGGACGTAGTGGGTGCGCGATCTGC 157
** * ***** *** * **
consensus_9410#5 CCGCGGGCCACACACGGGTTACC--GAAGAGATGTTCTGCAGCATCGGCAAAGCGTCCGT 195
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 CCGCGGGCCACACACGGGTTTACCGAAGGAGATGTTCTGCAGCATCGGCAAAGCGTCCGT 349
consensus_9410#1 TCG--GGCCGGGCG-GGGTACCGCCGGACGTGCAAAGCA--TACTGCG-CTCCTG-CGGC 470
consensus_9410#3 TCG--GGCCGGGCGCGGGTACCGCCGGACGTGCAAAGCA--TACTGCG-CTCCTG-CGGC 419
consensus_9410#2 TCG--GGCCGGGCG-GGGTACCGCCGGACGTGCAAAGCA--TACTGCG-CTCCTG-CGGC 204
consensus_9410#4 TCGATGGCCGGGCG-GGGTACCAGCGGACGTGCAAAGCGAGTACTGCGGCTCCTGACGGC 216
consensus_9410#5 CGGTCC------------------------------------------------------ 201
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 CGGTCCAACTTTACCATTCATGAATGCAGTTTCGGGCTGAACTGCCACCAGCAGCTCGTC 409
consensus_9410#1 TGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGAGCG--GATTCCAGCCGA 528
consensus_9410#3 TGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGGGCG--GCTTCCAGCCGA 477
consensus_9410#2 TGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACCAGGGCG--GCTTCCAGCCGA 262
consensus_9410#4 TGGAATCCCGGTACG----ATGTCAGGCGCGAGTTGTATCCGGGCGTGNGTGCCAACCA- 271
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 GCGACCTGTACTCGCTTGGGGAGTGAGTGTTTCTATTCAGTGGTTCCGTGGCACACAAAC 469
consensus_9410#1 TGGACATTGCGTCGGCGATACGCGGTATACCGGAGGTGCCCGGGATGAAGTCGTGCATCG 588
consensus_9410#3 TGGACATTGCGTCGGCGATACGCGGCATACCG---------------------------- 509
consensus_9410#2 TGGACATTGCGTCGGCGATACGCGGCATACCGGAGGTGCCCGGGATGAAGTCGTGCATCG 322
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 CAAACACGGCAAACAGTGACAGCAAGCGACGCGGCAGCCGCGTAAGGATGTTCTCCAGCA 529
consensus_9410#1 GAAACCTG---------------------------------------------------- 596
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 GCAACCTGGTGCGGCACGGGTTCGACGTGATCATCATAAGCGATTCCAACTCGGAGTTCA 382
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 GTGGACGGCTGCTGAAGCGGCTGGCCGTGCTGGATTTCGATCACACCGTCTGCGAACACA 589
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 TACGGCTGTGGAACGATTTCAACGACATCGGCTCGTACATACACAGCGTGTTCACAAATC 442
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 ACACGGACGTAGTGGTGCGCGATCTGCTCGGGCCGGGCGGGGTACCGCCGGACGTGCAAA 649
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 CGGCCCGGTTCGATGGCAGCGGGCTGCTGGAGCTGCGCCCGTACCACTACCAGACGGAGT 502
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 GCATACTGCGCTCCTGCGGCTGGATCCCGTACATGCAGCGCGTCTTCCGGCTGCTGCACC 709
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 GCTCGCTCAGCTCGAAGAACCTTTGCAAGGGCAAGATAATGGAAGAGTTCCTGCGCCGGC 562
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 AGAGCGGATTCCAGCCGATGGACATTGCGTCGGCGATACGCGGTATACCGGAGGTGCCCG 769
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 AGCACGACGAGCGGCAGGTCGATTACGAGAAGG--------------------------- 595
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 GGATGAAGTCGTGCATCGGAAACCTGGTGCGGCACGGGTTCGATGTGATCATCATAAGCG 829
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 ATTCCAACTCGGAGTTCATACGGCTGTGGAACGATTTCAACGACATCGGCTCGTACATAC 889
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 ACAGCGTGTTCACAAATCCGGCCCGGTTCGATGGCAGCGGGCTGCTGGAGCTGCGCCCGT 949
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 ACCACTACCAAACGGAGTGCTCGCTCAGCTCGAAGAACCTTTGCAAGGGCAAGATAATGG 1009
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 AAGAGTTCCTGCGCCGCCAGCACGACGAGCGGCAGGTCGATTACGAGAAGGTGTTCTACG 1069
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 CCGGGGACGGCAAGAACGACGTGTGTCCGATGTTGCGGCTCGGCAGCAATGGGTACGCCT 1129
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 GTGCCAGACGTGGCTACTCCTGCCATGATGCGCTGCAGGGTGCCATCGGGAAGCTGGAGC 1189
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 ACCCGTACGTGGCCAAGGTACTGCAGTGGACGGATGGGCACGAGCTGAACGACCTTATAT 1249
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 GGACTGAACTGGAGGACTGATCTTTACAGCGCCGTACTGTTTTCACCCTGCTCAGCACAC 1309
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 CGGTTGCCGAAATGCTATTGCATGTGTGCCGGTGTGCTGTGGTTGGCATTTTTTACAGAC 1369
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------------------------------------------------------
consensus_9410#6 ------------------------------------------------------------
consensus_9410#0 TCCATAATGATGGTGAATATACTACATTTTGTTTCATTTTTTTTTCCTAATAAAATACCG 1429
consensus_9410#1 ------------------------------------------------------------
consensus_9410#3 ------------------------------------------------------------
consensus_9410#2 ------------------------------------------------------------
consensus_9410#4 ------------------------------------------------------------
consensus_9410#5 ------------
consensus_9410#6 ------------
consensus_9410#0 TTGCAAACGAAA 1441
consensus_9410#1 ------------
consensus_9410#3 ------------
consensus_9410#2 ------------
consensus_9410#4 ------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||