|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9420#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1435 fasta sequence
[GGCGCACGGCGCGCGGCGCGNCGGCGCCGCCAGCGGCANATNGCCTCNAGGCAAGAATTCGCCACGAGNGAACCGACGACACCAACACGATATCGGCCACCAAATCGTGCACGTCGTGTT-TTCGTTCGTTCGTTCGAAAAG-ATTTTGTTTTTCATTAG-TGTTGTAACCGCTTTGCGTACGATATCAGT-TTTCTT-TGCTCAGCTCAAGCTTCA-TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA-TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT-ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG-AAATCGGTTTGTC-GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGG-TGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTCTTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTAAGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAAT----AGTAAAAAAAA]
[+] EMBL BX469125 [GGCGCACGGCGCGCGGCGCGNCGGCGCCGCCAGCGGCANATNGCCTCNAGGCAAGAATTCGCCACGAGNGAACCGACGACACCAACACGATATCGGCCACCAAATCGTGCACGTCGTGTTGTTCGTTCGTTCGTTCGAAAAGCATTTTGTTTTTCATTAGCTGTTGTAACCGCTTTGCGTACGAT CGAGTGTTTCTTATGCTCAGCTCAAGCTTCAGTTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAAGTCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATC ]
[+] EMBL BX603137 [ ACACGATATCGGCCACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG A TTGTTTTTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACAT CTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACT ]
[+] EMBL CNS08OSQ [ cCCACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTTTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCAAAGTTCTCCGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG A ]
[+] EMBL CNS08RUP [ tCACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTTTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGTGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCAAAAAAAGGAGGACCACGTATTCGATACA ]
[+] EMBL BM593869 [ ccgACCAAATCGTGCACGTCGTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTCTCATTAG TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGAAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGC ]
[+] EMBL BX612885 [ TGCACGTCTTGTT TTCGTTCGTTCGTTCGAAAAG ATTTTGTTTTTCATTAT TGTTGTAACCGCTTTGCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAGTCAAGCGCGATCAGCTGGTGCGCGTT ]
[+] EMBL BM649332 [ ccgcccacGCGTCCG TATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGAAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGT ]
[+] EMBL BM626760 [ cCGTACGATATCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTCCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACG ]
[+] EMBL BM643147 [ ccgCAGT TTTCTT TGCTCAGCTCAAGCTTCA TTAACCAATCTTAGCGAAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCGAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACATCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTG ]
[+] EMBL BM619956 [ ccGCTCAAGCTTCA TTAACCAATCTTAGCGTAATGCGATTGATAGAGAAGGTGTTTAA TCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATGGTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATATGGAGTTTCCCCACATCAAGGTGATCATACCGACCGCACCGGTACAACCGTACACCCCGATGGGGGGCGAAAACTCTAACGTGTGGTTCAACCGGAAGCGCATTGAGATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCATCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATC ]
[-] EMBL CNS08OSR [ ATGGACTGCCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGGGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGGACTGGCCATGCACGCCGGCTAAACATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCAATTTATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGG TGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTCTTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTAAGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAATGGGGAGTAAAAAAAA]
[+] EMBL BX622553 [ GCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGCGAGCTGGCTGCCGGCGTGCCGCTGAACCGGATCGTCGTCGGCGGTTTCTCGATGGGCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGCACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACGCGTTGATTGAGCAAGATAANGAAATGGTATAATGTGATTAGCGGAAAATCGGTTTGTCNGGTTGAGATTTtc ]
[+] EMBL BM640560 [ cCGGCGCACTGGCCATGCACGCCGGCT ACCATCTGAATCGCGATTTGGGCGGTGTGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGTTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGCACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACGCGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTTCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGGCTGCGCGAATG ]
[+] EMBL BM653089 [ ccgGTTTGCCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGACTTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGCACAACGTTACGCGAAATGGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGATCTAAAAATAAGGCTGCGCGAATGCA ]
[-] EMBL CNS08RUQ [ CGGAGCTGCTGATGATGCACGGCGAGTGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGAATTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGACACAACGAAGGTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGATAAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAATTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAATGTGATTAGCGG AAATCGGTTTGTC GGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGAGCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGTCTAAAAATAAGG TGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTCTTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTAAGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAAT AGAAAAAA ]
consensusID : consensus_9420#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 563 fasta sequence
[ACATCGGCACGAGGNGTNTAAAACTCGAACGTGTGGTTCAACCCGGAAGCGCATTTTAGAATGGACTGCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTNGTGCGCGAGCTGGCTGCCGGCGTGCCGCTTTAACCCGGATCGTCGTCGCGGTTTCTCGATATGGCGGCGCACTGGCCATGCACGCCGGGTACCATCTTAATCTGCGATTTGGGCGGTGTGTTTTGCCATTTCGTCATTCCTGAACAGCGGAAGTATCGTGTACGATTCGCTGGAANGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCTGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTTTNTTATTNATATNTGGAANANNCAGNTATAAAACAAAGAACAGTTTATTCACACGTTATTACAAAAAATTCTTATTCGCTAGCTTAAAGCT]
[+] EMBL BX469260 [ACATCGGCACGAGGNGTNTAAAACTCGAACGTGTGGTTCAACCCGGAAGCGCATTTTAGAATGGACTGCCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTNGTGCGCGAGCTGGCTGCCGGCGTGCCGCTTTAACCCGGATCGTCGTCGCGGTTTCTCGATATGGCGGCGCACTGGCCATGCACGCCGGGTACCATCTTAATCTGCGATTTGGGCGGTGTGTTTTGCCATTTCGTCATTCCTGAACAGCGGAAGTATCGTGTACGATTCGCTGGAANGTGTTGCGCAGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGCCGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCGTACCGCATCTGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTTTNTTATTNATATNTGGAANANNCAGNTATAAAACAAAGAACAGTTTATTCACACGTTATTACAAAAAATTCTTATTCGCTAGCTTAAAGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9420#0 GGCGCACGGCGCGCGGCGCGNCGGCGCCGCCAGCGGCANATNGCCTCNAGGCAAGAATTC 60
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 GCCACGAGNGAACCGACGACACCAACACGATATCGGCCACCAAATCGTGCACGTCGTGTT 120
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 TTCGTTCGTTCGTTCGAAAAGATTTTGTTTTTCATTAGTGTTGTAACCGCTTTGCGTACG 180
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 ATATCAGTTTTCTTTGCTCAGCTCAAGCTTCATTAACCAATCTTAGCGTAATGCGATTGA 240
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 TAGAGAAGGTGTTTAATCCGACGGGCAAGAAACATGCTGGCACGTTGATCTTCTTTCATG 300
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 GTTCTGGCGACACTGGCAATGGATTGACGGAATGGATTCGGTTTCTGCTGGGCCGGGATA 360
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 TGGAGTTTCCCCACATCAAGGTGATCATCCCGACCGCACCGGTACAACCGTACACCCCGA 420
consensus_9420#1 ---------------------------------------------------ACATCGGCA 9
*** * *
consensus_9420#0 TGGGGGGCG-AAAACTCGAACGTGTGGTTCAACC-GGAAGCGCATT--GAGATGGACTGC 476
consensus_9420#1 CGAGGNGTNTAAAACTCGAACGTGTGGTTCAACCCGGAAGCGCATTTTAGAATGGACTGC 69
* ** * ************************ *********** *********
consensus_9420#0 CCGGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTGGTGCGC 536
consensus_9420#1 C-GGAAATACGGACGTCGCTTGCCTCGATCTACGACACGGTGAACGAAATGCTNGTGCGC 128
* *************************************************** ******
consensus_9420#0 GAGCTGGCTGCCGGCGTGCCGCT--GAACCGGATCGTCGTCGGCGGTTTCTCGATG-GGC 593
consensus_9420#1 GAGCTGGCTGCCGGCGTGCCGCTTTAACCCGGATCGTCGTCG-CGGTTTCTCGATATGGC 187
*********************** * ************** ************ ***
consensus_9420#0 GGCGCACTGGCCATGCACGCCGGCTACCATCTGAATC-GCGATTTGGGCGGTGTGTTT-G 651
consensus_9420#1 GGCGCACTGGCCATGCACGCCGGGTACCATCTTAATCTGCGATTTGGGCGGTGTGTTTTG 247
*********************** ******** **** ******************** *
consensus_9420#0 CCATTTCGTCATTCCTGAACACCGGAAGTATCGTGTACGATTCGCTGGAAGGTGTTGCGC 711
consensus_9420#1 CCATTTCGTCATTCCTGAACAGCGGAAGTATCGTGTACGATTCGCTGGAANGTGTTGCGC 307
********************* **************************** *********
consensus_9420#0 AGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGC 771
consensus_9420#1 AGGACGAGCACCTGCCGGAGCTGCTGATGATGCACGGCGAGCGGGACACGCTGGTACCGC 367
************************************************************
consensus_9420#0 CGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCG 831
consensus_9420#1 CGGAATGGGGACAGACCACGTTCGATGAGCTGGCCAAGCTGGGTGTGCGTGGTCAGTTCG 427
************************************************************
consensus_9420#0 TACCGCATC-GTACCGCGCTGCACGAAATCAAGCGCGATCAGCTGGTGCGCGTTATCGAC 890
consensus_9420#1 TACCGCATCTGTACCGCGCTGCACGAAATCAAGCGCGATCAGCTT-----TNTTATTNA- 481
********* ********************************** **** *
consensus_9420#0 TTTGTGCAGAAGATTATTCCGGAACCGGAGGACAACGTATTCGAAACACCGGCACCCGAC 950
consensus_9420#1 TATNTGGAANANNCAGNTATAAAAC-AAAGAACAGTTTATTC-ACACGTTATTACAAAAA 539
* * ** * * * *** ** *** ***** * ** ** *
consensus_9420#0 ACAACGAAG-GTCAGCAAAAAGGGAAAGCTATGACGGAGTTCATATCGAAGCGATAAGAT 1009
consensus_9420#1 ATTCTTATTCGCTAGCTTAAAGCT------------------------------------ 563
* * * *** ****
consensus_9420#0 AAAAGCGCGTTGAATGCGCTTCCAACAACCTTGCGATTGTGGGGACAACGTTACGCGAAA 1069
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 TTGGTCTATTGTACGCTGCATTGTACACGTTGATTGAGCAAGATAAGGAAATGGTATAAT 1129
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 GTGATTAGCGGAAATCGGTTTGTCGGTTGAGATTTCCTGCATAGGGAGGTAAACAAACGA 1189
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 GCGACAAACGTACACATACACACAGGATTGTCATTCACAACAAAACACAATTTAGTTGGT 1249
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 CTAAAAATAAGGTGCGCTAATGCAGTTAAGCGCATAAGCGGAGAATGGATGTTACTATTC 1309
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 TTAGTATCCTCGTAGCCGTTCGTGATGGCTCGTGTGTCAGTTTTAGTTTCCCTTGGCTTA 1369
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 AGTTAAGCTTCGGGCAACATTAAAGTGCGAAGTAAATAAACCCCTTTTCTACAATAGTAA 1429
consensus_9420#1 ------------------------------------------------------------
consensus_9420#0 AAAAAA 1435
consensus_9420#1 ------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||