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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9429#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1192 fasta sequence
[CCGGTCGTTTTCGGTCGTAGCGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCCGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCACCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAAAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT-GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAA-AAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCACAATTTTACCATTTTTACCTATTCACCCAGCGACACACATAGCCCCAGATATACTTACACNAACCTATCCTATCCTATACTATCGCTTACGTGTCATATTTGGAAACGCTCTCGCATCATCTGNTTTATTCCCGTCGTTGATTTAATTNCGATGAAATGATAACATATTTGCATCAGATGCCACTATTAAAAG]
[+] EMBL BM656584 [CCGGTCGTTTTCGGTCGTAGCGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCCGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCACCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAAAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACG ]
[+] EMBL BX623194 [ GCGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCCGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCACCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAAAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCT ]
[+] EMBL BM599147 [ ccgGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCCGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCACCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAAAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACATGGGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACT ]
[+] EMBL BX628041 [ CCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAA AAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCAC ANTTTACCATTTTTACCTATTCA CCAGCGACAC ]
[+] EMBL BX627124 [ CCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAA AAAGAACACACACCAAGAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACNAA ]
[+] EMBL BM631941 [ ccgCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGACATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAAGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCCTGCTAGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTGCAGTCCGTCGTGTACTGGGTAAAAACACACAAACTAAGAACACACACAAAAAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCA ]
[+] EMBL BX622305 [ TTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGATTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAA AAAGAACACACACAAAGAAACGATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCACAATTTTACCATTTTTACCTATTCACCCAGCGACACACATAGCCCCAGATATACTTACACNAACCTATCCTATCCTATACTATCGCTTACGTGTCATATTTGGAAACGCTCTCGCATCATCTGNTTTATTCCCGTCGTTGATTTAATTNCGATGAAATGATAACATATTTGCATCAGATGCCACTATTAAAAG]
[+] EMBL BM581422 [ ccGACAT GGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCCTGCTAGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTGCAGTCCGTCGTGTACTGGGTAAAAACACACAAACTAAGAACACACACAAAAAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTACGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCACAATTTTACCATTTTTACCTATACACCCAGCGACACACATAGCCCCAGATATACTTACACAAACCTATCCTATCCTATACAATCGCTTACGTGTCATATTTGGAAACGCTCTCGCATCATCTGTTTTATT CCGTCGTTGATTTAAT ]
consensusID : consensus_9429#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[CCGCCCACGCGTCCGGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAAAAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCACAATTTTACCATTTTTACCTATTCACCCAGCGACACACATAGCCCCAGATATACTTACACAAACCTATCCTATCCTATACAATCGCTTACGTGTCATATTTGGAAACGCTCTCGCATCATCTGTTTTATTCCGTCGTTGATTTAATTCCGATGAAAATGATAACATATTTGCAGCAGATGCAACTATTAAAAAGAAAGGTAAATAGTAACGGTGCGCGTGCAATAAT]
[+] EMBL BM576740 [CCGCCCACGCGTCCGGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGACGAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCATAAAAAGATGGTCGTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGCCAAGGGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGGTAAAAACACACAAAAAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTTCATTTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACGATGGTGAAAACAGTGTGGGATGATTACGAATGGGTAGTTTTGTCACAATTTTACCATTTTTACCTATTCACCCAGCGACACACATAGCCCCAGATATACTTACACAAACCTATCCTATCCTATACAATCGCTTACGTGTCATATTTGGAAACGCTCTCGCATCATCTGTTTTATTCCGTCGTTGATTTAATTCCGATGAAAATGATAACATATTTGCAGCAGATGCAACTATTAAAAAGAAAGGTAAATAGTAACGGTGCGCGTGCAATAAT]
consensusID : consensus_9429#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 626 fasta sequence
[CCCACGCGTCCGGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCTGTGTTTTGGCGAATTTGTGGCCCCGATTTGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCCCCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAGAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGACATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAAGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACATGGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGA]
[+] EMBL BM620113 [CCCACGCGTCCGGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCTGTGTTTTGGCGAATTTGTGGCCCCGATTTGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCCCCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAGAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGACATTTTCGACGCGGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGTAAAAGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACATGGATAACGATGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGA]
[+] EMBL BM595283 [ ccgATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCTGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCCCCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAGAAACTGGATCTCGACAATTCGGGCGCCCTCA ]
consensusID : consensus_9429#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 624 fasta sequence
[CCGCGGACGCGTGGGAAAATGATAACATATTTGCAGCAGATGCAACTATTAAAAAGAAAGGTAAATAGTAACGGTGCGCGTGCAATAATGGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAATCTATCGTTCATCAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGAGAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGTCTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTTAGCATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGTATTATATAGACCAATGTAGTTAAGTAATAATATTAATAAAAAAGTGCGATCTGCCGAAGATGGATTAACTGGTGAATTAACTCTGGCAGAAAGTGGCAGCAGAAAAGGAATGAATGGGGAATGAATAAACACATTTAATCTCAAATCCACCGCCCATAGCCAATGGAAAATTGCAATTGTTTCGCCGTCTCCAACTGCATGTCCAGGATACCTTACCCTTTCCTTTGGTTCTATCGTCAATGGTATAGT]
[+] EMBL BM648523 [CCGCGGACGCGTGGGAAAATGATAACATATTTGCAGCAGATGCAACTATTAAAAAGAAAGGTAAATAGTAACGGTGCGCGTGCAATAATGGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAATCTATCGTTCATCAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGAGAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGTCTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTTAGCATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGTATTATATAGACCAATGTAGTTAAGTAATAATATTAATAAAAAAGTGCGATCTGCCGAAGATGGATTAACTGGTGAATTAACTCTGGCAGAAAGTGGCAGCAGAAAAGGAATGAATGGGGAATGAATAAACACATTTAATCTCAAATCCACCGCCCATAGCCAATGGAAAATTGCAATTGTTTCGCCGTCTCCAACTGCATGTCCAGGATACCTTACCCTTTCCTTTGGTTCTATCGTCAATGGTATAGT]
consensusID : consensus_9429#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 560 fasta sequence
[GCAGAATCGGCACGATGGAGCAGATGCAACTATTAAAAACGAAAGGTAAATAGTAACGGTGCGCGTGCAATAATGGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAATCTATCGTTCATCAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGAGAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGTCTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTTAGCATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGTATTATATAGACCAATGTAGTTAGTAATAATATTAATAAAAAAGTGCGATCTGCCGAAGATGGATTAACTGGTGAATTAACTCTGGCAGACAAGTGGCCAGCAGAAAAGGAATGAATGGGGAATGAATAAACACATTTAATCTCAAATCCACCGGGCCATAGNCAATGGAAANATGCAATTGTTTACGCCGTCTCCCAACT]
[+] EMBL BX469839 [GCAGAATCGGCACGATGGAGCAGATGCAACTATTAAAAACGAAAGGTAAATAGTAACGGTGCGCGTGCAATAATGGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAATCTATCGTTCATCAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGAGAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGTCTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTTAGCATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGTATTATATAGACCAATGTAGTTAGTAATAATATTAATAAAAAAGTGCGATCTGCCGAAGATGGATTAACTGGTGAATTAACTCTGGCAGACAAGTGGCCAGCAGAAAAGGAATGAATGGGGAATGAATAAACACATTTAATCTCAAATCCACCGGGCCATAGNCAATGGAAANATGCAATTGTTTACGCCGTCTCCCAACT]
consensusID : consensus_9429#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 486 fasta sequence
[TTTTTTTTAAANTCATCTTCGGCAGATCGCACTTTTTTTTATTAATATTATTACTTAACTACATTGGTCTATATAATACGTAAGTGTAATCGATTGAAACAAAACAAACTCATATAACGTATAATGCTAAGCATAATTAATCGTCTCTTGCTGTTTTAAAAACGTTGATAACGAAGTTTCACAGACTAACCGCACAAGGAGACAATTGTAACAATATGTAAATAGGTAAAACATGAATTGCCTCTCTCTTAAACATTTACGACACACACAATATTGTTTTTAAGGACATATTGATGAACGATAGATTAATTGAAATTGAAAGATAAACACTGGATAGTACCATCACAAACCATTATTGCACGCGCACCGTTACTATTTACCTTTCTTTTTAATAGTTGCATCTGATGCAAATATGTTATCATTTTCATCGGAATTAAATCAACGACGGAATAAAACAGATGATGCGAGAGCGTTTTAACTCGTGGG]
[+] EMBL AGA280177 [TTTTTTTTAAANTCATCTTCGGCAGATCGCACTTTTTTTTATTAATATTATTACTTAACTACATTGGTCTATATAATACGTAAGTGTAATCGATTGAAACAAAACAAACTCATATAACGTATAATGCTAAGCATAATTAATCGTCTCTTGCTGTTTTAAAAACGTTGATAACGAAGTTTCACAGACTAACCGCACAAGGAGACAATTGTAACAATATGTAAATAGGTAAAACATGAATTGCCTCTCTC ]
[-] EMBL AL692182 [ TATTACTTAACTACATTGGTCTATATAATACGTAAGTGTAATCGATTGAAAC AAAC AACTCATATAACGTATAATGCTAAGCATAATTAATCGTCTCTTGCTGTTTTAAAAACGTTGATAACGAAGTTTCACAGACTAACCACACAAGGAGACAATTGTAACAATATGTAAATAGGTAAAACATGAATTGCCTCTCTCTTAAACATTTACGACACACACAATATTGTTTTTAAGGACATATTGATGAACGATAGATTAATTGAAATTGAAAGATAAACACTGGATAGTACCATCACAAACCATTATTGCACGCGCACCGTTACTATTTACCTTTCTTTTTAATAGTTGCATCTGATGCAAATATGTTATCATTTTCATCGGAATTAAATCAACGACGGAATAAAACAGATGATGCGAGAGCGTTTTAACTCGTGGG]
consensusID : consensus_9429#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 187 fasta sequence
[GNAATCGCGCTCGCTCATGATATTCTGCAGAGCTGGCAAACCCGCTGGTGCAGCCGTGTGATCCGACATTTTCGACGCGGACGGCAATGGGGAGGTCCGATTTCAAGGAGTTTATCCAGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTTCCGAATATATGA]
[+] EMBL AL932427 [GNAATCGCGCTCGCTCATGATATTCTGCAGAGCTGGCAAACCCGCTGGTGCAGCCGTGTGATCCGACATTTTCGACGCGGACGGCAATGGGGAGGTCCGATTTCAAGGAGTTTATCCAGGCGTGTCGCAGTTTAGCGTAAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTTCCGAATATATGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9429#0 CCGGTCGTTTTCGGTCGTAGCGAATCTTCTTCTAAGCTCACGCAAAAAATCCCGTGCAAT 60
consensus_9429#1 ------------------------------------------------------------
consensus_9429#2 ------------------------------------------------------------
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 ------------------------------------------------------------
consensus_9429#4 ------------------------------------------------------------
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 TACCATAGCCCGTGTGTGGTTCCGTGTTTTGGCGAATTTGTGGCCCCGATTAGGTATCCT 120
consensus_9429#1 ------------------------------------------------------------
consensus_9429#2 ------------------------------------------------------------
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 ------------------------------------------------------------
consensus_9429#4 ------------------------------------------------------------
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 GTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCATAGTTAGGAGCACCAGCCGTAGGCA 180
consensus_9429#1 ------------------------------------------------------------
consensus_9429#2 ------------------------------------------------------------
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 ------------------------------------------------------------
consensus_9429#4 ------------------------------------------------------------
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 ACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGCAACAGATCAAGAAATGGGAAATGA 240
consensus_9429#1 ------------------------------------------------------------
consensus_9429#2 ------------------------------------------------------------
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 ------------------------------------------------------------
consensus_9429#4 ------------------------------------------------------------
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 AACCTCGCTACCGATGGAGCTCTGCTCAAACTTTGACGCGGACGAAATCCGTCGATTGGG 300
consensus_9429#1 ------------------------------------------------------------
consensus_9429#2 ------------------------------------------------------------
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 ------------------------------------------------------------
consensus_9429#4 ------------------------------------------------------------
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 CAAACGCTTCAAAAAACTGGATCTCGACAATTCGGGCGCCCTCAGCATCGATGAGTTTAT 360
consensus_9429#1 ------------------------------------------------------------
consensus_9429#2 ------------------------------------------------------------
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 ------------------------------------------------------------
consensus_9429#4 ------------------------------------------------------------
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 GTCCCTGCCAGAGCTGCAGCAAAACCCGCTGGTGCAGCGTGTGATCGATATTTTCGACGC 420
consensus_9429#1 ------------------------------------------------------------
consensus_9429#2 ------------------------------------------------------------
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 ------------------------------------------------------------
consensus_9429#4 ------------------------------------------------------------
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 GGACGGCAATGGGGAGGTCGATTTCAAGGAGTTTATCCAGGGCGTGTCGCAGTTTAGCGT 480
consensus_9429#1 ------------------------------------------------------------
consensus_9429#2 ------------------------------------------------------------
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 ------------------------------------------------------------
consensus_9429#4 ------------------------------------------------------------
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 AAAGGGCGACAAACTGTCCAAGCTGAAATTTGCCTTCCGAATATATGACATGGATAACGA 540
consensus_9429#1 ------------------------------------------------------------
consensus_9429#2 ------------------------------------------------------------
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 ------------------------------------------------------------
consensus_9429#4 ------------------------------------------------------------
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 TGGATACATCTCGAATGGGGAACTATTTCAGGTGTTAAAAATGATGG--TCGGTAACAAT 598
consensus_9429#1 ------------------------------CCGCCCACGCGTCCGGG--TCGGTAACAAT 28
consensus_9429#2 ---------------------------------CCCACGCGTCCGGAATCTTCTTCTAAG 27
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 ------------------------------CCGCGGACGCGTGGGAAAATGATAACATAT 30
consensus_9429#4 -------------------------------------------GCAGAATCGGCACGA-- 15
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 CTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGAC 658
consensus_9429#1 CTGAAGGATACGCAACTGCAGCAGATCGTAGACAAGACGATCGTGTTCGCCGACAAGGAC 88
consensus_9429#2 CTCACGCAAAAAATCCCGTGCAATTACCATAGCCCGTGTGTGGTTCTGTGTTTTGGCGAA 87
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 TTGCAGCAGATGCAACTATTAAAAA-GAAAGGTAAATAGTAACGGTGCGCGTGCAATAAT 89
consensus_9429#4 -TGGAGCAGATGCAACTATTAAAAACGAAAGGTAAATAGTAACGGTGCGCGTGCAATAAT 74
consensus_9429#5 ------------------------------------------------------------
consensus_9429#0 GAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCAT 718
consensus_9429#1 GAGGATGGCAAGATATCGTTCGACGAGTTCTGTTCGGTGGTGGGCAACACCGATATTCAT 148
consensus_9429#2 TTTGTGGCCCCGATTTGGTATCCTGTAATCAGGACAGCTTAAAGTACGTGCCCAAGTCAT 147
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 GGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAA-TCTATCGTTCAT 148
consensus_9429#4 GGTTTTGTGATGGTACTATCCAGTGTTTATCTTTCAATTTCAATTAA-TCTATCGTTCAT 133
consensus_9429#5 ------------------TTTTTTTTAAANTCATCTTCGGCAGATCGCACTTTTTTTTAT 42
consensus_9429#0 AAAAAGATGGTC--GTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGC 776
consensus_9429#1 AAAAAGATGGTC--GTGGATGTCTAAAGATTCTCGTGCTGGGTTCGGTTTACCTCTCCGC 206
consensus_9429#2 AGTTAGGAGCCCCAGCCGTAGGCAACGAGCAGCGTCTTTCGAGAAGCCATAGTATCGAGC 207
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 CAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGA 208
consensus_9429#4 CAATATGTCCTTAAAAAACAATATTTTTGTTTGTTTGTTTGTTCGTAAATGTTTAAGAGA 193
consensus_9429#5 TAATATTATTACTTAACTACATTGGTCTATATAAT-ACGTAAGTGTAATCGATTGAAACA 101
consensus_9429#0 CAAG-GGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGG 835
consensus_9429#1 CAAG-GGCATAGGCACCATCAATATGTAGTAATGGGCGGTACAGTCCGTCGCGTACTGGG 265
consensus_9429#2 AACA-GATCAAGAAATGGGAAATGAAACCTCGCTACCGATGGAGCTCTGCTCAAACTTTG 266
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 GAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGT 268
consensus_9429#4 GAGGCAATTCATGTTTTACCTATTTACATATTGTTACAATTGTCTCCTTGTGCGGTTAGT 253
consensus_9429#5 AAACAAACTCATATAACGTATAATGCTAAGCATAATTAATCGTCTCTTGCTGTTTTAAAA 161
consensus_9429#0 TAAAAACACACAAAAAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTT-CAT 894
consensus_9429#1 TAAAAACACACAAAAAAGAACACACACAAAGAAACAATTCGTCGTCCTGCAAGCTT-CAT 324
consensus_9429#2 -----ACGCGGACGAAATCCGTCGATTGGGCAAACGCTTCAAGAAACTGGATCTCGACAA 321
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 CTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTT-AGC 327
consensus_9429#4 CTGTGAAACTTCGTTATCAACGTTTTTAAAACAGCAAGAGACGATTAATTATGCTT-AGC 312
consensus_9429#5 ACGT-TGATAACGAAGTTTCACAGACTAACCGCACAAGGAGACAATTGTAACAATATGTA 220
consensus_9429#0 TTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACG 954
consensus_9429#1 TTGAAACACTATTGCAATAATCTGCACCTTAATCTCCCACCCGCGGTGTTGCTGCGAACG 384
consensus_9429#2 TTCGGGCGCCCTCAGCATCGAT--GAGTTTATGTCCCTGCCAGAGCTGCAGCAAAACCCG 379
consensus_9429#6 -------GNAATCGCGCTCGCT--CATGATAT---TCTGC-AGAGCTG--GCAAA-CCCG 44
consensus_9429#3 ATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGT--ATTATATAGA 385
consensus_9429#4 ATTATACGTCATATGAGTTTGTTTTGTTTCAATCGATTACACTTACGT--ATTATATAGA 370
consensus_9429#5 AATAGGTAAAACATGAATTGCCTCTCTCTTAAACATTTACGACACACACAATATTGTTTT 280
* * *
consensus_9429#0 ATGGTGAAAACAGTGTGG---GATGATT-ACGA-ATGGGTAGTTTTGTCACAATTTT-AC 1008
consensus_9429#1 ATGGTGAAAACAGTGTGG---GATGATT-ACGA-ATGGGTAGTTTTGTCACAATTTT-AC 438
consensus_9429#2 CTGGTGCAG-C-GTGTGATC-GACATTT-TCGACGCGGACGGCAATGGGGAGGTC----- 430
consensus_9429#6 CTGGTGCAG-CCGTGTGATCCGACATTT-TCGACGCGGACGGCAATGGGGAGGTCC---- 98
consensus_9429#3 CCAATGTAG-TTAAGTAAT--AATATTA-ATAAAAAAGTGCGATCTGCCGAAGATGG-AT 440
consensus_9429#4 CCAATGTAG-TTA-GTAAT--AATATTA-ATAAAAAAGTGCGATCTGCCGAAGATGG-AT 424
consensus_9429#5 TAAGGACATATTGATGAACGATAGATTAATTGAAATTGAAAGATAAACACTGGATAGTAC 340
* * * * * *
consensus_9429#0 CATTTTTACCTATT--CACCCAGCGACACACATAGCCCCAGATATACTTACACNAACCTA 1066
consensus_9429#1 CATTTTTACCTATT--CACCCAGCGACACACATAGCCCCAGATATACTTACACAAACCTA 496
consensus_9429#2 GATTTCAAGGAGTT--TATCCAGGGCGTGTCGCAGTTTAGCGTAAAAGGCGACAAAC-TG 487
consensus_9429#6 GATTTCAAGGAGTT--TATCCAGG-CGTGTCGCAGTTTAGCGTAAAGGGCGACAAAC-TG 154
consensus_9429#3 TAACT-GGTGAATT--AACTCTGGCAGA-AAGTGGC--AGCAGAAAAGGAATGAATGGGG 494
consensus_9429#4 TAACT-GGTGAATT--AACTCTGGCAGACAAGTGGCC-AGCAGAAAAGGAATGAATGGGG 480
consensus_9429#5 CATCACAAACCATTATTGCACGCGCACCGTTACTATTTACCTTTCTTTTTAATAGTTGCA 400
* ** *
consensus_9429#0 TCCTA-TCCTATACTATCGCTTACGTGT-CATATTTGGAAACGCTCTCGCATCATCTGNT 1124
consensus_9429#1 TCCTA-TCCTATACAATCGCTTACGTGT-CATATTTGGAAACGCTCTCGCATCATCTGTT 554
consensus_9429#2 TCCAA-GCTGAAATTTGCCTT-CCGAATATATGACATGGATAACGATGGATACATCTCGA 545
consensus_9429#6 TCCAA-GCTGAAATTTGCCTTTCCGAATATATGA-------------------------- 187
consensus_9429#3 AATGA-ATAAACACATTTAATCTCAAATCCACCGC-CCATAGCCAATGGAAAATTGCA-A 551
consensus_9429#4 AATGA-ATAAACACATTTAATCTCAAATCCACCGGGCCATAGNCAATGGAAANATGCA-A 538
consensus_9429#5 TCTGATGCAAATATGTTATCATTTTCAT-CGGAATTAAATCAACGACGGAATAAAACAGA 459
* * * *
consensus_9429#0 TTATTCCCGTCGTTGATTTAATTNCGATGAAA-TGATAACATATTTGCATCAGATGCCAC 1183
consensus_9429#1 TTATTCC-GTCGTTGATTTAATTCCGATGAAAATGATAACATATTTGCAGCAGATGCAAC 613
consensus_9429#2 ATGGGGAACTATTTCAGGTGTTAAAAATGATGGTCGGTAACAATCTGAAGGATACGCAAC 605
consensus_9429#6 ------------------------------------------------------------
consensus_9429#3 TTGTTT-CGCCGTCTCC-AACTGCATGTCCAGGATACCTTACCCTTTCCTTTGGTTCTAT 609
consensus_9429#4 TTGTTTACGCCGTCTCCCAACT-------------------------------------- 560
consensus_9429#5 TGATGCGAGAGCGTTTTAACTCGTGGG--------------------------------- 486
consensus_9429#0 TATTAAAAG---------------------------------- 1192
consensus_9429#1 TATTAAAAAGAAAGGTAAATAGTAACGGTGCGCGTGCAATAAT 656
consensus_9429#2 TGCAGCAGATCGTAGACAAGA---------------------- 626
consensus_9429#6 -------------------------------------------
consensus_9429#3 CGTCAATGGTATAGT---------------------------- 624
consensus_9429#4 -------------------------------------------
consensus_9429#5 -------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||