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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9430#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1314 fasta sequence
[ACGTAAACAAAATGCAGCGAACAATACGATCAGTCGAAAGATAATCGCGTAACCCCTCGGAATCGACCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATT-CTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGG-AATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCC-ATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCGAGCCGCGG-ACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACAT-GGATGCGTTCGTGCACATGTGGCGCGTGATAGGCCACATGATGGGCATCGAAGAGAGATTCAACGCTTGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCGAACGAAATACTGCAGCCTGCCCTGCTCCAACGCACGGCCGAATTTGTCAAAATGGGGAAAGCGCTCATCGAAGGTTTGTGGTGCTTCAATCCGTTAGTCGAGTTCGATAGCTTCCTGTTCCTGACGATGCGCCTTAACAACATACCCGGCTATCACTACT-GGGCGGATGAGGCGACGCCGGGTGTGAAGGAATCGGAATCGCGTCTTCGGCCCTACGAACAGTTCAGCCGGTACGCCCGGTTTATTCTCTACTGTGTGTGCTACATCCAATCGGTTCTGCTGAACATTGCGCTGGTCCGGTGGTACTTTAACATGCAGATGGTAATGTCCCGGTTTCTGATCACCTACTTCCCGTTTCTGGCCATCTACGCGTATGGTGTGACGGATGCGTACGTGCGCATCTTGAAGTAAACGGCGCGTAACTAACGATTTCAGGGATTTTTTTTCGCTGTTACCTCTGTAAGCTATCTGTTATCTATTTTTATCTAACTTTGGTGAAATGC]
[+] EMBL CNS08MQF [ACGTAAACAAAATGCAGCGAACAATACGATCAGTCGAAAGATAATCGCGTAACCCCTCGGAATCGACCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATTACTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGG AATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCC ATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCGAGCCGCGG ACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAA GACAT GGATGCGTTCGTGCACATGTGGCGCGTGATAGGCCACATGATGGGCATCGAAGAGAGATTCAACGCTTGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCGAACGAAATACTGCAGCCTGCCCTGCTCCAACGCACGGCCGAATTTGTCAAAATGGGGAAAGCGCTCATCGAAGGTTTGTGGTGCTTCAATCCGTTAGTCGAGTTCGATAGCTTCCTGTTCCTGACGATGCGCCTTAACAACATACCCGGCTATCACTAAT GGGaaaaaaaa ]
[+] EMBL BM628488 [ ccgACAAAATGCAGCGAACAATACGATCAGTCGAAAGATAATCGCGTAACCCCTCGGAATCGACCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATT CTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGG AATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCC ATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCGAGCCGCGG ACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATT ]
[+] EMBL BM654372 [ ccgATACGATCAGTCGAAAGATAATCGCGTAACCCCTCGGAATCGACCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATT CTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGG AATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCC ATTATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCGAGCCGCGG ACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGT ]
[+] EMBL BM598112 [ ccgCGCGTAACCCCTCGGAATCGACCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATT CTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGG AATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCC ATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCGAGCCGCGG ACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGA ]
[+] EMBL BX605935 [ ATCGACCTTTCCCTAAGAGAGGACAAATAACAAAACATCAAATT CTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGG AATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCC ATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCGAGCCGCGG ACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACAT GGATGCGTTCGTGCATATGTGGC ]
[+] EMBL BM594836 [ ccgCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATT CTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGG AATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCC ATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCGAGCCGCGG ACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACATGGGATGCGTTCGTGCACATGTGGCGCGTGATAGGCCACATGATGGGCAT ]
[+] EMBL BX623669 [ AGAGGACAAATAACAAAACATCAAATT CTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGGNAATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCC ATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCG ]
[+] EMBL BX627658 [ GGATAAGAAACATCCTGCACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGG AATCGCCCGGAAGCGAGTTATTTGGAGGCACTCGACCAGGGTGCGAACATTTCGGTTGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAGAAGGGCACAAGAGTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCC ATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCGAGCCGCGG ACGGCCTACCGGCGCTACGTAGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACGTCTCGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACAT GGATGCGTTCGTGCACATGTGGCGCGTGATTGGCCACATGATGGGCATCGAAGAGAGATTCAACGCTTGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCGAACGAAATACTGCAGCCTGNCCTGCTCC ACGCACGGGCGAATT ]
[-] EMBL CNS08QSV [ AGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCC ATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCGAGCCGCGGAACGG CTACCGGCGCTACGTTGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACAT GGATGCGTTCGTGCACATGTGGCGCGTGATAGGCCACATGATGGGCATCGAAGAGTTTTTTTACGCTTGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCGAACGAAATACTGCAGCCTGCCCTGCTCCAACGCACGGCCGAATTTGTCAAAATGGGGAAAGCGCTCATCGAAGGTTTGTGGTGCTTCAATCCGTTAGTCGAGTTCGATAGCTTCCTGTTCCTGACGATGCGCCTTAACAACATACCCGGCTATCACTACT GGGCGGATGAGGCGACGCCGGGTGTGAAGGAATCGGAATCGCGTCTTCGGCCCTACGAACAGTTCAGCCGGTACGCCCGGTTTATTCTCTACTGTGTGTGCTACATCCAATCGGTTCTGCTGAACATTGCGCTGGTCCGGTGGTACTTTAACATGCAGATGG ]
[-] EMBL CNS08MQG [ TTCGTCGGTAAGCTGTGCGGACTGCTCGCCAATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAACCAATCGTCCGAGCCGCGG AC GCCTACCGGCGCTACG TGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACAT GGATGCGTTCGTGCACATGTGGCGCGTGATAGGCCACATGATGGGCATCGAAGAGAGATTCAACGCTTGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCGAACGAAATACTGCAGCCTGCCCTGCTCCAACGCACGGCCGAATTTGTCAAAATGGGGAAAGCGCTCATCGAAGGTTTGTGGTGCTTCAATCCGTTAGTCGAGTTCGATAGCTTCCTGTTCCTGACGATGCGCCTTAACAACATACCCGGCTATCACTACT GGGCGGATGAGGCGACGCCGGGTGTGAAGGAATCGGAATCGCGTCTTCGGCCCTACGAACAGTTCAGCCGGTACGCCCGGTTTATTCTCTACTGTGTGTGCTACATCCAATCGGTTCTGCTGAACATTGCGCTGGTCCGGTGGTACTTTAACATGCAGATGGTAATGTCCCGGTTTCTGATCACCTACTTCCCGTTTCTGGCCATCTACGCGTATGGTGTGACGGATGCGTACGTGCGCATCTTGAAGTAAACGGCGCGTAACTAACGATTTCAGGGATTTTTTTTCGCTGTTACCTCTGTAAGCTATCTGTTATCTATTTTTATCTAACTTTGGTGAAATGC]
[+] EMBL BX626519 [ GTTTGTNAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACAT GGATGCGTTCGTGCACATGTGGCGCGTGATAGGCCACATGATGGGCATCGAAGAGAGATTCAACGCTTGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCGAACGAAATACTGCAGCCTGCCCTGCTCCAACGCACGGCCGAATTTGTCAAAATGGGGAAAGCGCTCATCGAAGGTTTGTGGTGCTTCAATCCGTTAGTCGAGTTCGATAGCTTCCTGTTCCTGACGATGCGCCTTAACAACATACCCGGCTATCACTACT GGGCGGATGAGGCGACGCCGGGTGTGAAGGAATCGGAATCGCGTCTTCGGCCCTACGAACAGTTCAGCCGGTACGCCCGGTTTATTCTCTACTGTGTGTGCTACATCCAATCGGTTCTGCTGAACATTGCGCTGGTCCGGTGGTACTTTAACATGCAGATGGTAATGTCCCGGTTTCTGATCACCTACTTCCCGTTTCTGGCCATCTACGCGTATGGTGTGACGGATGCGTACGTGCGCATCTTGAAGTAAACGGCGCGTAACT ]
[-] EMBL CNS09BGL [ ATGCGCCTTAACAACATACCCGGCTATCACTACTCCCCCGGATGAGGCGACGCCGGGTGTGAAGGAATCGGAATCGCGTCCTCGGCCCTACGAACAGTTCAGCCGGTACGCCCGGTTTATTCTCTACTGTGTGTGCTACATCCAATCGGTTCTGCTGAACATTGCGCTGGTCCGGTGGTACTTTAACATG ]
consensusID : consensus_9430#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 848 fasta sequence
[GAAAGATAATCGCGTAACCCCTCGGAATCGACCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATTCTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGGAATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCCATCATTACGGTGCCGTCGATTTTGCGCAAAAAAAAAAACACAAACCAATCGTCCGAGCCGCGGACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGACATGGATGCGTTCGTGCACATGTGGCGCGTGATAGGCCACATGATGGGCATCGAAGAGAGATTCAACGCTTGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCGAACGAAATACTGCAGCCTGCCCTGCTCCAACGCACGGCCGAATTTTGTCAAAATGGGGGAAAGCGCTCATCGA]
[+] EMBL CNS08QSU [GAAAGATAATCGCGTAACCCCTCGGAATCGACCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATTCTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGGAATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCCATCATTACGGTGCCGTCGATTTTGCGCAAAAAAAAAAACACAAACCAATCGTCCGAGCCGCGGACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCTGGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGTGAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCATCTCCCAGCGAGACATGGCGATCACTCAGTTTGGCTTCATTGGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGACATGGATGCGTTCGTGCACATGTGGCGCGTGATAGGCCACATGATGGGCATCGAAGAGAGATTCAACGCTTGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCGAACGAAATACTGCAGCCTGCCCTGCTCCAACGCACGGCCGAATTTTGTCAAAATGGGGGAAAGCGCTCATCGA]
[+] EMBL BM642104 [ tccgAATCGCGTAACCCCTCGGAATCGACCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATTCTGCAGTCTTGGTCGTGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGGAATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGCGGACTGCTCGCCATCATTAC ]
[+] EMBL BX609999 [ gTAGCGGAAAAGAAACATCCCGGACATGCACCAGGGGCGCAACAGAAACCAGTGACGTAGGTCCAGGGAATCGCCCGGAAGCGAGTTATTTGGAGGCACTCGACCAGGGTGCGAACATTTCGGT GATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGAGTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCTGTGC ]
[+] EMBL CNS09BGK [ ACATGCACCATGGGCGCGACAGAAACCAGTGACGTAGGTCCAGGGAATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGGTGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAAGATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCT ]
consensusID : consensus_9430#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 695 fasta sequence
[TTATTATTAGGTACAAAGAAGGTGTTAGATTGATAAAGGTACAAAAATATTAAAAAAAGCATAAACAAAACAAAAATATCATGAGTGTTTTCTTAATTTATATACTAAATAAACTGCTTTTGTTAATTTTGTTGACTAACAGTCGATCATTTTACACAAAGGTTGGGAATTTTTCCCCTTAAAATTATATTCCATTTCATTCTTAACCAACTGAACGTGTCGCAAATCAGCTTAATTGATTTAGAGTCTTTATAAATAATTATTAGATGATTAAATTTGTCCAGTACGGGGTCTTTTTTGTACACCAAAGCCGAATTCCAGTGCCAGCCCTTCATTTATGTATTGCTTACTTTTAGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACATGGATGCGTTCGTGCATATGTGGCGCGTGATAGGCCACATGATGGGCATCGAAGAGAGGTCAGTTACAGCGATCTTTCGCCAGTTCCTTCCCAAAGCCCGTGTAAATAACCGTGTTTACTTCCATGCTTCAGATTCAACGCTTGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCAAACGAAATACTGCAGCCTGCCCTGCTCCATCGCACGGCCGAATTTGTCAAAATGGGCAAAGCGCTCATCGAAGGTTTGTGGTGCTTCAATCCGCGG]
[-] EMBL BM584453 [TTATTATTAGGTACAAAGAAGGTGTTAGATTGATAAAGGTACAAAAATATTAAAAAAAGCATAAACAAAACAAAAATATCATGAGTGTTTTCTTAATTTATATACTAAATAAACTGCTTTTGTTAATTTTGTTGACTAACAGTCGATCATTTTACACAAAGGTTGGGAATTTTTCCCCTTAAAATTATATTCCATTTCATTCTTAACCAACTGAACGTGTCGCAAATCAGCTTAATTGATTTAGAGTCTTTATAAATAATTATTAGATGATTAAATTTGTCCAGTACGGGGTCTTTTTTGTACACCAAAGCCGAATTCCAGTGCCAGCCCTTCATTTATGTATTGCTTACTTTTAGCTACATCATTATTAGCCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACATGGATGCGTTCGTGCATATGTGGCGCGTGATAGGCCACATGATGGGCATCGAAGAGAGGTCAGTTACAGCGATCTTTCGCCAGTTCCTTCCCAAAGCCCGTGTAAATAACCGTGTTTACTTCCATGCTTCAGATTCAACGCTTGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCAAACGAAATACTGCAGCCTGCCCTGCTCCATCGCACGGCCGAATTTGTCAAAATGGGCAAAGCGCTCATCGAAGGTTTGTGGTGCTTCAATCCGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9430#0 ACGTAAACAAAATGCAGCGAACAATACGATCAGTCGAAAGATAATCGCGTAACCCCTCGG 60
consensus_9430#1 -----------------------------------GAAAGATAATCGCGTAACCCCTCGG 25
consensus_9430#2 ------------------------------------------------------------
consensus_9430#0 AATCGACCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATTCTGCAGTCTTGGTCG 120
consensus_9430#1 AATCGACCTTTCCCGAAGAGAGGACAAATAACAAAACATCAAATTCTGCAGTCTTGGTCG 85
consensus_9430#2 ------------------------------------------------------------
consensus_9430#0 TGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAAC 180
consensus_9430#1 TGGCCATAATCTTATCGGATAAGAAACATCCCGGACATGCACCATGGGCGCAACAGAAAC 145
consensus_9430#2 ------------------------------------------------------------
consensus_9430#0 CAGTGACGTAGGTCCAGGGAATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGG 240
consensus_9430#1 CAGTGACGTAGGTCCAGGGAATCGCCCGGAAGCGAGTTATTTGGAGACACTCGAACAGGG 205
consensus_9430#2 ------------------------------------------------------------
consensus_9430#0 TGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAA 300
consensus_9430#1 TGCGAACATTTCGGTGGATTACGGCGACATCGAGCTTCCCGAGTGGTACGACGATGGGAA 265
consensus_9430#2 --------TTATTATTAGGTACAAAGA-----AGGTGTTAGATTGATAAAGGTACAAAAA 47
** * *** ** ** * ** ** ** * **
consensus_9430#0 GATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCT 360
consensus_9430#1 GATTAAAAGGGCACAAGATTACTTCAGGCGCAACTTTTACGCGATGTTCGTCGGTAAGCT 325
consensus_9430#2 TATTAAAAAAA-GCATAAACAAAACAAAAATATCATGAGTGTTTTCTTAATTTATATACT 106
******* ** * * ** * * * * * ** * ** **
consensus_9430#0 GTGCGGACTGCTCGCCATCATTACGGTGCCGTCGATTTTGCGCGTGCTGGTCCACACAAA 420
consensus_9430#1 GTGCGGACTGCTCGCCATCATTACGGTGCCGTCGATTTTGCGCAAAAAAAAAAACACAAA 385
consensus_9430#2 AAATAAACTGCTT----TTGTTA--ATTTTGTTGACTAACAGTCGATCATTTTACACAAA 160
****** * *** * ** ** * * *******
consensus_9430#0 CCAATCGTCCGAGCCGCGGACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCT 480
consensus_9430#1 CCAATCGTCCGAGCCGCGGACGGCCTACCGGCGCTACGTTGCCACCATCATGCATACGCT 445
consensus_9430#2 --GGTTGG--GAATT-----TTTCCCCTTAAAATTATATT-CCATT-TCATTCTTA-ACC 208
* * ** ** ** ** *** **** * ** *
consensus_9430#0 GGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGT 540
consensus_9430#1 GGAATGGTACTTCGAGGATTTCGTTCCCACATCTAGAGCCTGGAAATCGATATCGTTTGT 505
consensus_9430#2 AACTGAACGTGTCGCAAATCAGCTTAATTGATTTAGAGTCTTT--ATAAATAATTATTAG 266
*** ** ** ** ***** ** ** *** **
consensus_9430#0 GAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCAT 600
consensus_9430#1 GAGAAAAACTCACGCCGGTGTGAGCAGACAGGCATCGAGCGTTCGTCCGGGCATGATCAT 565
consensus_9430#2 ATGATTAAATTTGTCCAGTACGGG-------GTCTTTTTTGTACACCAAAGCCGAATT-- 317
** ** * ** ** * * * * ** * * ** **
consensus_9430#0 CTCCCAGCGAGACATGGCGATCACTCA-GTTTGGCTT--CATTGGCTACATCATTATTAG 657
consensus_9430#1 CTCCCAGCGAGACATGGCGATCACTCA-GTTTGGCTT--CATTGGCTACATCATTATTAG 622
consensus_9430#2 ---CCAGTGCCA---GCCCTTCATTTATGTATTGCTTACTTTTAGCTACATCATTATTAG 371
**** * * * * *** * * ** * **** ** ****************
consensus_9430#0 CCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACATGGATGCGTTCGTGCACATGTG 717
consensus_9430#1 CCACCGCAAGCTTGGCGTCCAGTACGACCCGAAG-ACATGGATGCGTTCGTGCACATGTG 681
consensus_9430#2 CCACCGCAAGCTTGGCGTCCAGTACGACCCGAAGGACATGGATGCGTTCGTGCATATGTG 431
********************************** ******************* *****
consensus_9430#0 GCGCGTGATAGGCCACATGATGGGCATCGAAGAGAG------------------------ 753
consensus_9430#1 GCGCGTGATAGGCCACATGATGGGCATCGAAGAGAG------------------------ 717
consensus_9430#2 GCGCGTGATAGGCCACATGATGGGCATCGAAGAGAGGTCAGTTACAGCGATCTTTCGCCA 491
************************************
consensus_9430#0 --------------------------------------------------ATTCAACGCT 763
consensus_9430#1 --------------------------------------------------ATTCAACGCT 727
consensus_9430#2 GTTCCTTCCCAAAGCCCGTGTAAATAACCGTGTTTACTTCCATGCTTCAGATTCAACGCT 551
**********
consensus_9430#0 TGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCGAACGAAATACTG 823
consensus_9430#1 TGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCGAACGAAATACTG 787
consensus_9430#2 TGCACCGATCGGTTCGAAACCACCGAGCAGCGGATGTCGCTGATAGCAAACGAAATACTG 611
*********************************************** ************
consensus_9430#0 CAGCCTGCCCTGCTCCAACGCACGGCCGAATTT-GTCAAAATGGGG-AAAGCGCTCATCG 881
consensus_9430#1 CAGCCTGCCCTGCTCCAACGCACGGCCGAATTTTGTCAAAATGGGGGAAAGCGCTCATCG 847
consensus_9430#2 CAGCCTGCCCTGCTCCATCGCACGGCCGAATTT-GTCAAAATGGGC-AAAGCGCTCATCG 669
***************** *************** *********** *************
consensus_9430#0 AAGGTTTGTGGTGCTTCAATCCGTTAGTCGAGTTCGATAGCTTCCTGTTCCTGACGATGC 941
consensus_9430#1 A----------------------------------------------------------- 848
consensus_9430#2 AAGGTTTGTGGTGCTTCAATCCGCGG---------------------------------- 695
*
consensus_9430#0 GCCTTAACAACATACCCGGCTATCACTACTGGGCGGATGAGGCGACGCCGGGTGTGAAGG 1001
consensus_9430#1 ------------------------------------------------------------
consensus_9430#2 ------------------------------------------------------------
consensus_9430#0 AATCGGAATCGCGTCTTCGGCCCTACGAACAGTTCAGCCGGTACGCCCGGTTTATTCTCT 1061
consensus_9430#1 ------------------------------------------------------------
consensus_9430#2 ------------------------------------------------------------
consensus_9430#0 ACTGTGTGTGCTACATCCAATCGGTTCTGCTGAACATTGCGCTGGTCCGGTGGTACTTTA 1121
consensus_9430#1 ------------------------------------------------------------
consensus_9430#2 ------------------------------------------------------------
consensus_9430#0 ACATGCAGATGGTAATGTCCCGGTTTCTGATCACCTACTTCCCGTTTCTGGCCATCTACG 1181
consensus_9430#1 ------------------------------------------------------------
consensus_9430#2 ------------------------------------------------------------
consensus_9430#0 CGTATGGTGTGACGGATGCGTACGTGCGCATCTTGAAGTAAACGGCGCGTAACTAACGAT 1241
consensus_9430#1 ------------------------------------------------------------
consensus_9430#2 ------------------------------------------------------------
consensus_9430#0 TTCAGGGATTTTTTTTCGCTGTTACCTCTGTAAGCTATCTGTTATCTATTTTTATCTAAC 1301
consensus_9430#1 ------------------------------------------------------------
consensus_9430#2 ------------------------------------------------------------
consensus_9430#0 TTTGGTGAAATGC 1314
consensus_9430#1 -------------
consensus_9430#2 -------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||