These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9435#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1555 fasta sequence [GTGAGTTATCATTACGTTGTTAGTAATTTCGAAAAGGGTTCAGTTTGGTTTATTGAGT-ACAGGAAAACATCGTGTGTCTGTGTCTCCGTATATGCGTTGTCATTCGCTCTACACACCCATTGTATAAT-TCT-A---TTCACTGATCTGAGAGTGTCCTGTCTGATGCTTGCACTGGCCGTTTGATTATCGTCAAGATCGTCTACCGTTGCCAACCCTCTTTCAATCGCCCAGTTGCAA-CAGCAGTTGGCAGTCGAAAAAGGGGGAATGAAATTATGCATAAATGAACGGAATAAATAAGTATTCACTAGTCGTCAGTCACTGGACGATCAGATGACTCCTTCCCGGTATTATAGTTGATGAATGAAAATAAAGACTTTATATTACAGTGTTTCTTTTTTTTCAATCGCTAACACGGGCTTGTCTTGATATTGAATTAGTTGCGAACGAGCTATCCATTTTGATAATGGAATATCGTTTAATTGATTTATATGATTATATGATTAATTGC-GTGAACAGATTGCATTAATTATGTACTTAGTTAGTGGATTTTTGATGAGTTGATAAGAGCACTTTTAAGCAATATTTTTGTTGCTGTTGAAATTAGAA-GTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTT-------TTTGTAATTAGCAACGAAGTGT-GATAACTATACGAAATTGGAGCTGATCAAG-A-CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC-CGTAAGCA-CGCT-CGCAACACAT-CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATAGCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGC--TGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT-GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCACTCCTGGTGGTTTTTCTTCTGCCGTTCGCTCGGGCTTACAAGCTGTGTGTGTATTTTTGTTCACCGC] [+] EMBL CNS08H13 [GTGAGTTATCATTACGTTGTTAGTAATTTCGAAAAGGGTTCAGTTTGGTTTATTGAGT ACAGGAAAACATCGTGTGTCTGTGTCTCCGTATATGCGTTGTCATTCGCTCTACACACCCATTGTATAAT TCT A TTCACTGATCTGAGAGTGTCCTGTCTGATGCTTGCACTGGCCGTTTGATTATCGTCAAGATCGTCTACCGTTGCCAACCCTCTTTCAATCGCCCAGTTGCAA CAGCAGTTGGCAGTCGAAAAAGGGGGAATGAAATTATGCATAAATGAACGGAATAAATAAGTATTCACTAGTCGTCAGTCACTGGACGATCAGATGACCCCTTCCCGGTATTATAGTTGATGAATGAAAATAAAGACTTTATATTACAGTGTTTCTTTTTTTTCAATCGCTAACACGGGCTTGTCTTGATATTGAATTAGTTGCGAACGAGCTATCCATTTTGATAATGGAATATCGTTTAATTGATTTATATGATTATATGATTAATTGC GTGAACAGATTGCATTAATTATGTACTTAGTTAGTGGATTTTTGATGAGTTGATAAGAGCACTTTTAAGCAATATTTTTGTTGCTGTTGAAATTAGAA GTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTT TTTGTAATTAGCAACGAAGTGT GATAACTATACGAAATTGGAGCTGATCAAG A CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAtttaacg ] [+] EMBL AGA280829 [ ttttttTTACGTTGTTAGTAATTTCGAAAAGGGTTCAGTTTGGTTTATTGAGTAACAGGAAAACATCGTGTGCCTGTGTGGCTGTATATGCGTTGTCATTCGCACTACACACCCATTGTATAAT TCT A TTCACTGATCTGAGAGTGTCCTGGCTGATGCATGCGCTGGTCGTTTGATTATCGTCAAGATCGTCTACCGTTGCCAACCCTCTTTCAATCGCCCAGTTGCAACCAGCAGTTGGCAGTCGAAAAA GGGGAATGAAATTATGCATAAATGAACGGAATAAATAAGTATTCACTAGTCGTCAGTCACTGGACGATCAGATGACTCCTTCCCGGTATTATCGTTGATGAATGAAAATAAAGAGTTTATATTACAGTGTTTCTTTTTTTTCGATCGCTAACACGGGCTTG ] [+] EMBL CNS092R0 [ TTCGAAAA CGTTCAGTTTGGTTTATTGAGT ACAGGAAAACATCGTGTGTCTGTGTCTCCGTATATGCGTTGTCATTCGCTCTACACACCCATTGTATAATATCTCACTCTCCACTGATCTGAGAGTGTCCTGTCTGATGCTTGCACTGGCCGTTTGATTATCGTCAAGATCGTCTACCGTTGCCAAACCTCTTTCAATCGCCCAGTTGCAA CAGCAGTTGGCAGTCGAAAAAGGGGGAATGAAATTATGCATAAATGAACGGAATAAATAAGTATTCACTAGTCGTCAGTCACTGGACGATCAGATGACTCCTTCCCGGTATTATAGTTGATGAATGAAAATAAAGACTTTATATTACAGTGTTTCTTTTTTTTCAATCGCTAACACGGGCTTGTCTTGATATTGAATTAGTTGCGAACGAGCTATCCATTTTGATAATGGAATATCGTTTAATTGATTTATATGATTATATGATTAATTGCGGTGAACAGATTGCATTAATTATGTACTTAGTTAGTGGATTTTTGATGAGTTGATAAGAGCACTTTTAAG AATATTTTTGTTGCTGTTGAAATTAGAAGGTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTT TTTGTAATTAGCAACG AGTTG GATAACTATACGAAATTGGAGCTGATCAAG A CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGGGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAAT ] [+] EMBL CNS09HXM [ aTTTTTCAATCGCTAACACGGGCTTGTCTTGATATTGAATTAGTTGCGAACGAGCTATCCATTTTGATAATGGAATATCGTTTAATTGATTTATATGATTATATGATTAATTGC GTGAACAGATTGCATTAATTATGTACTTAGTTAGTGGATTTTTGATGAGTTGATAAGAGCACTTTTAAGGAATATTTTTGTTGCTGTTGAAATTAGAA GTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTT TTTGTAATTAGCAACGAAGTGTGGATAACTATACGAAATTGGAGCTGATCAAGCA CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAGGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATA CCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCAGGACGAGTGGATTGAGCGAATTGCACTTATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCA ] [-] EMBL CNS092QZ [ TTGCTGTTGAAATTAGAA GTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTT TTTGTAATTAGCAACGAAGTGT GATAACTATACGAAATTGGAGCTGATCAAG A CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATAGCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAG CCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTT TTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGC TGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGGTGGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCAC ] [-] EMBL BM592356 [ ATTGCCTATTTGGGAGATCTATTTAGTGTTTTTTTTTTTTGTTTGTAATTAGCAACGAAGTGT GATTACGGTACAAAATTGAAGCTGATCAAG A CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACcgg ] [-] EMBL CNS09HXL [ GATCTATTTAGTGTTTTTT TTTGTAATTAGCAACGAAGTGT GATAACTATACGAAATTGGAGCTGATCAAG ACCCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAGGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATAGCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCAGGACGAGTGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGC TGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCACTCCTGGTGGTTTTTCTTCT ] [+] EMBL CNS09QNC [ CGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTACTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTA ] [-] EMBL BM580612 [ TTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCTCTCCTGGTGGTTTTTCcgg ] [-] EMBL BM596014 [ AATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCTCTCCTGGTGGTTTTTCTTCTGCCGTTCGCTCGG ] [-] EMBL BM614327 [ TCATGCCGTAAAGATAGTAGAAGACCGATAAAAGGTACACCGCCAGCTTAATCCACCCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCTCTCCTGGTGGTTTTTCTTCTGCCGTTCGCTCGG ] [-] EMBL CNS08H12 [ CAACCTTCCGCGTAAGCAGCGCTGCGCAACACATCCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATAGCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGC TGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCACTCCT GTGGTTTTTCTT TGC ] [-] EMBL BX602529 [ GCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGCCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATAGCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGC TGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCACTCCTGGTGGTTTTTCTTCTGCCGTTCGCTAGCGCTTACAAGCTGTGTGTGTATTTTTGTTCACCGC] consensusID : consensus_9435#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 771 fasta sequence [AACGATAAACTTTAAACTTCGGGGTGTTATAACACCGGGTGCCCGGGATAACTTCAGGAAACCTCGCNTCCGGGGGTATAAACATTAATCACGTCTTAAACGGNGTCGTCTCCGGGAATCCGCACCGGGAANCTTGAACGGCCTCCAAGTGTGTGTTGCGGGNCCTCCGCCCGGGGTATACTNTGAGCAAGTGTTAACGGGTGGTAACAAACTCNCCAATGCGGCACCCAACTANAGAANCTTTTTTGGGNANAACCCCAACAGGCATAACCTTAAACTTGGGTTAAGCGCCCCACGGTTTAAACCTCCGCCGGGGCCTGAGGGGTATCGGTTAGACCTGGGGTAACTTTTTGGAAATGGCCCCTGGTAATATTGTTGAGACCGAAATGCCCATTAGGGGAAACCTTTCCAGGTAATTCCGGGCGTCTATCTTCATCATCGGTTAAAGCCTACGACTGGTTCCGTCTGCACNAACGCTTCGCTCGGAAAGGGGCCAATGTCCACCCGTTGGGAAGATTGCGAAAAGGAACTATGAGAAAAGGTCATCGATAATTTAACTCGCCCACCGATTGTAGNTAAAGTGGGCGGGTGNAAGTTACAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCAACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGCGCGTTTGCTGATTTGTACACTCTCTCTTNNCCTCGGGGGCGAT] [-] EMBL AL932439 [AACGATAAACTTTAAACTTCGGGGTGTTATAACACCGGGTGCCCGGGATAACTTCAGGAAACCTCGCNTCCGGGGGTATAAACATTAATCACGTCTTAAACGGNGTCGTCTCCGGGAATCCGCACCGGGAANCTTGAACGGCCTCCAAGTGTGTGTTGCGGGNCCTCCGCCCGGGGTATACTNTGAGCAAGTGTTAACGGGTGGTAACAAACTCNCCAATGCGGCACCCAACTANAGAANCTTTTTTGGGNANAACCCCAACAGGCATAACCTTAAACTTGGGTTAAGCGCCCCACGGTTTAAACCTCCGCCGGGGCCTGAGGGGTATCGGTTAGACCTGGGGTAACTTTTTGGAAATGGCCCCTGGTAATATTGTTGAGACCGAAATGCCCATTAGGGGAAACCTTTCCAGGTAATTCCGGGCGTCTATCTTCATCATCGGTTAAAGCCTACGACTGGTTCCGTCTGCACNAACGCTTCGCTCGGAAAGGGGCCAATGTCCACCCGTTGGGAAGATTGCGAAAAGGAACTATGAGAAAAGGTCATCGATAATTTAACTCGCCCACCGATTGTAGNTAAAGTGGGCGGGTGNAAGTTACAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCAACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGCGCGTTTGCTGATTTGTACACTCTCTCTTNNCCTCGGGGGCGAT] consensusID : consensus_9435#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 657 fasta sequence [TAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTATCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCCCGTAAGCACGCTCGCAACACATCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCTCTCCTGGTGCCCACGCGTCCGCGG] [-] EMBL BM581598 [TAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTATCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCCCGTAAGCACGCTCGCAACACATCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCTCTCCTGGTGCCCACGCGTCCGCGG] [-] EMBL AGA282455 [ TAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCCCGTAAGCACGCTCGCAACACATCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGT ] consensusID : consensus_9435#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 488 fasta sequence [ATCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGACGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGCGCGTTNTGCTGATTGTACACTCTCTCTTGACCTCGGGGC] [-] EMBL AL933446 [ATCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGACGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGCGCGTTNTGCTGATTGTACACTCTCTCTTGACCTCGGGGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9435#0 GTGAGTTATCATTACGTTGTTAGTAATTTCGAAAAGGGTTCAGTTTGGTTTATTGAGTAC 60 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 AGGAAAACATCGTGTGTCTGTGTCTCCGTATATGCGTTGTCATTCGCTCTACACACCCAT 120 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 TGTATAATTCTATTCACTGATCTGAGAGTGTCCTGTCTGATGCTTGCACTGGCCGTTTGA 180 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 TTATCGTCAAGATCGTCTACCGTTGCCAACCCTCTTTCAATCGCCCAGTTGCAACAGCAG 240 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 TTGGCAGTCGAAAAAGGGGGAATGAAATTATGCATAAATGAACGGAATAAATAAGTATTC 300 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 ACTAGTCGTCAGTCACTGGACGATCAGATGACTCCTTCCCGGTATTATAGTTGATGAATG 360 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 AAAATAAAGACTTTATATTACAGTGTTTCTTTTTTTTCAATCGCTAACACGGGCTTGTCT 420 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 TGATATTGAATTAGTTGCGAACGAGCTATCCATTTTGATAATGGAATATCGTTTAATTGA 480 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 TTTATATGATTATATGATTAATTGCGTGAACAGATTGCATTAATTATGTACTTAGTTAGT 540 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 GGATTTTTGATGAGTTGATAAGAGCACTTTTAAGCAATATTTTTGTTGCTGTTGAAATTA 600 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 GAAGTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTTTTTGTAATTAGCAACGAA 660 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 GTGTGATAACTATACGAAATTGGAGCTGATCAAGACCAATCCGAATTAGCGATCGAAATG 720 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ------------------------------------------------------------ consensus_9435#0 TACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGC 780 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ----------------------AACGATAAACTTTAAACTTCGG--GGTGTTATAACACC 36 consensus_9435#0 AATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATA 840 consensus_9435#2 ------------------------------------------------------------ consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 GGGTGCCCGGGATAACTTCAGGAAACCTCGCNTCCGGGGGTATAAACATTAATCACGTCT 96 consensus_9435#0 TCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGT--GTCTTGGTGTGTCACT 898 consensus_9435#2 -----------------TAAAGCTCACTCGACGGAGGCTCGT--GTCTTGGTGTATCACT 41 consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 TAAACGGNGTCGTCTCCGGGAATCCGCACCGGGAANCTTGAACGGCCTCCAAGTGTGTGT 156 consensus_9435#0 TGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAG 958 consensus_9435#2 TGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAG 101 consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 TGCGGGNCCTCCGCCCGGGGTATACTNTGAGCAAGTGTTA------ACGGGTGGTAACAA 210 consensus_9435#0 AACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCCCGTAAGCACGCTCGCAA-CAC 1017 consensus_9435#2 AACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCCCGTAAGCACGCTCGCAA-CAC 160 consensus_9435#3 ------------------------------------------------------------ consensus_9435#1 ACTCNCCAATGCGGCACC--CAACTANAGAANCTTTTTTGGGNANAACCCCAACAGGCAT 268 consensus_9435#0 ATCCGTATTCATGA--TGCTGGTTGGATCGTACAGTCC-CGGCTGCGACATAACCGGCCT 1074 consensus_9435#2 ATCCGTATTCATGA--TGCTGGTTGGATCGTACAGTCC-CGGCTGCGACATAACCGGCCT 217 consensus_9435#3 ATCCGTATTCATGA--TGCTGGTTGGATCGTACAGTCC-CGGCTGCGACATAACCGGCCT 57 consensus_9435#1 AACCTTAAACTTGGGTTAAGCGCCCCACGGTTTAAACCTCCGCCGGGGCCTGAGGGGTAT 328 * ** ** * ** * * * ** * ** * ** * * * * * ** * consensus_9435#0 --GTTAG-CGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATA- 1130 consensus_9435#2 --GTTAG-CGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATA- 273 consensus_9435#3 --GTTAG-CGTACCTCCATATATGGTACGCGATGA-CGGTATATTTAGGGCGAGCGATA- 112 consensus_9435#1 CGGTTAGACCTGGGGTAACTTTTTGGAAATGGCCCCTGGTAATATTGTTGAGACCGAAAT 388 ***** * * * * * * * * **** ** * ** *** * consensus_9435#0 GCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCA 1190 consensus_9435#2 GCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCA 333 consensus_9435#3 GCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCA 172 consensus_9435#1 GCCCATTAGGGGAAACCTTTCCAGGTAATTCCGGGCGTCTATCT---TCATCATCGGTTA 445 *** * **** * ** * ** *** * * ** * * consensus_9435#0 GGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCT 1250 consensus_9435#2 GGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCT 393 consensus_9435#3 GGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCT 232 consensus_9435#1 AAGCCTACGACTGGTTCCGTCTGCACNAACGCTTCGCTCGGAAAGGGGCCAATGTCCACC 505 * ** * * * ***** * *** * ** ** * consensus_9435#0 CGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATG 1310 consensus_9435#2 CGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATG 453 consensus_9435#3 CGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATG 292 consensus_9435#1 CGTTGG-GAAGATTGCGAAAAGGA------ACTATGAGAAAAGGTCATCGATAATTTAAC 558 *** * * ** ** * ** * ** ** ** * *********** * consensus_9435#0 CCAC------GATGTAGCTAAA-----TGCGGGGAAGTTA-AACGCCATCCTTGTTTTCT 1358 consensus_9435#2 CCAC------GATGTAGCTAAA-----TGCGGGGAAGTTA-AACGCCATCCTTGTTTTCT 501 consensus_9435#3 CCAC------GATGTAGCTAAA-----TGCGGGGAAGTTA-AACGCCATCCTTGTTTTCT 340 consensus_9435#1 TCGCCCACCGATTGTAGNTAAAGTGGGCGGGTGNAAGTTACAACGCCATCCTTGTTTTCT 618 * * ***** **** * * * ****** ******************* consensus_9435#0 TTTCTGTTGGTCCGGCA-CAATCAGTTCAGTCGGTGCAGGCTGCTGT--CTTCGGCTGGG 1415 consensus_9435#2 TTTCTGTTGGTCCGGCA-CAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGG 560 consensus_9435#3 TTTCTGTTGGTCCGGCA-CAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGG 399 consensus_9435#1 TTTCTGTTGGTCCGGCAACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGG 678 ***************** ***************************** *********** consensus_9435#0 GTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTT-GC 1474 consensus_9435#2 GTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTT-GC 619 consensus_9435#3 GTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTG-CGCGTTNTGC 458 consensus_9435#1 GTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTG-CGCGTTT-GC 736 ************************************************* ****** ** consensus_9435#0 TGATT-GTACACTCACTCCTGGTGGTTTTTCTTCTGCCGTTCGCTCGGGCTTACAAGCTG 1533 consensus_9435#2 TGATT-GTACACTCTCTCCTGGTGCCCACGCGTCCGCGG--------------------- 657 consensus_9435#3 TGATT-GTACACTCTCTCTTGACCTCGGGGC----------------------------- 488 consensus_9435#1 TGATTTGTACACTCTCTCTTNNCCTCGGGGGCGAT------------------------- 771 ***** ******** *** * consensus_9435#0 TGTGTGTATTTTTGTTCACCGC 1555 consensus_9435#2 ---------------------- consensus_9435#3 ---------------------- consensus_9435#1 ---------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||