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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9435#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1555 fasta sequence
[GTGAGTTATCATTACGTTGTTAGTAATTTCGAAAAGGGTTCAGTTTGGTTTATTGAGT-ACAGGAAAACATCGTGTGTCTGTGTCTCCGTATATGCGTTGTCATTCGCTCTACACACCCATTGTATAAT-TCT-A---TTCACTGATCTGAGAGTGTCCTGTCTGATGCTTGCACTGGCCGTTTGATTATCGTCAAGATCGTCTACCGTTGCCAACCCTCTTTCAATCGCCCAGTTGCAA-CAGCAGTTGGCAGTCGAAAAAGGGGGAATGAAATTATGCATAAATGAACGGAATAAATAAGTATTCACTAGTCGTCAGTCACTGGACGATCAGATGACTCCTTCCCGGTATTATAGTTGATGAATGAAAATAAAGACTTTATATTACAGTGTTTCTTTTTTTTCAATCGCTAACACGGGCTTGTCTTGATATTGAATTAGTTGCGAACGAGCTATCCATTTTGATAATGGAATATCGTTTAATTGATTTATATGATTATATGATTAATTGC-GTGAACAGATTGCATTAATTATGTACTTAGTTAGTGGATTTTTGATGAGTTGATAAGAGCACTTTTAAGCAATATTTTTGTTGCTGTTGAAATTAGAA-GTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTT-------TTTGTAATTAGCAACGAAGTGT-GATAACTATACGAAATTGGAGCTGATCAAG-A-CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC-CGTAAGCA-CGCT-CGCAACACAT-CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATAGCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGC--TGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT-GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCACTCCTGGTGGTTTTTCTTCTGCCGTTCGCTCGGGCTTACAAGCTGTGTGTGTATTTTTGTTCACCGC]
[+] EMBL CNS08H13 [GTGAGTTATCATTACGTTGTTAGTAATTTCGAAAAGGGTTCAGTTTGGTTTATTGAGT ACAGGAAAACATCGTGTGTCTGTGTCTCCGTATATGCGTTGTCATTCGCTCTACACACCCATTGTATAAT TCT A TTCACTGATCTGAGAGTGTCCTGTCTGATGCTTGCACTGGCCGTTTGATTATCGTCAAGATCGTCTACCGTTGCCAACCCTCTTTCAATCGCCCAGTTGCAA CAGCAGTTGGCAGTCGAAAAAGGGGGAATGAAATTATGCATAAATGAACGGAATAAATAAGTATTCACTAGTCGTCAGTCACTGGACGATCAGATGACCCCTTCCCGGTATTATAGTTGATGAATGAAAATAAAGACTTTATATTACAGTGTTTCTTTTTTTTCAATCGCTAACACGGGCTTGTCTTGATATTGAATTAGTTGCGAACGAGCTATCCATTTTGATAATGGAATATCGTTTAATTGATTTATATGATTATATGATTAATTGC GTGAACAGATTGCATTAATTATGTACTTAGTTAGTGGATTTTTGATGAGTTGATAAGAGCACTTTTAAGCAATATTTTTGTTGCTGTTGAAATTAGAA GTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTT TTTGTAATTAGCAACGAAGTGT GATAACTATACGAAATTGGAGCTGATCAAG A CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAtttaacg ]
[+] EMBL AGA280829 [ ttttttTTACGTTGTTAGTAATTTCGAAAAGGGTTCAGTTTGGTTTATTGAGTAACAGGAAAACATCGTGTGCCTGTGTGGCTGTATATGCGTTGTCATTCGCACTACACACCCATTGTATAAT TCT A TTCACTGATCTGAGAGTGTCCTGGCTGATGCATGCGCTGGTCGTTTGATTATCGTCAAGATCGTCTACCGTTGCCAACCCTCTTTCAATCGCCCAGTTGCAACCAGCAGTTGGCAGTCGAAAAA GGGGAATGAAATTATGCATAAATGAACGGAATAAATAAGTATTCACTAGTCGTCAGTCACTGGACGATCAGATGACTCCTTCCCGGTATTATCGTTGATGAATGAAAATAAAGAGTTTATATTACAGTGTTTCTTTTTTTTCGATCGCTAACACGGGCTTG ]
[+] EMBL CNS092R0 [ TTCGAAAA CGTTCAGTTTGGTTTATTGAGT ACAGGAAAACATCGTGTGTCTGTGTCTCCGTATATGCGTTGTCATTCGCTCTACACACCCATTGTATAATATCTCACTCTCCACTGATCTGAGAGTGTCCTGTCTGATGCTTGCACTGGCCGTTTGATTATCGTCAAGATCGTCTACCGTTGCCAAACCTCTTTCAATCGCCCAGTTGCAA CAGCAGTTGGCAGTCGAAAAAGGGGGAATGAAATTATGCATAAATGAACGGAATAAATAAGTATTCACTAGTCGTCAGTCACTGGACGATCAGATGACTCCTTCCCGGTATTATAGTTGATGAATGAAAATAAAGACTTTATATTACAGTGTTTCTTTTTTTTCAATCGCTAACACGGGCTTGTCTTGATATTGAATTAGTTGCGAACGAGCTATCCATTTTGATAATGGAATATCGTTTAATTGATTTATATGATTATATGATTAATTGCGGTGAACAGATTGCATTAATTATGTACTTAGTTAGTGGATTTTTGATGAGTTGATAAGAGCACTTTTAAG AATATTTTTGTTGCTGTTGAAATTAGAAGGTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTT TTTGTAATTAGCAACG AGTTG GATAACTATACGAAATTGGAGCTGATCAAG A CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGGGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAAT ]
[+] EMBL CNS09HXM [ aTTTTTCAATCGCTAACACGGGCTTGTCTTGATATTGAATTAGTTGCGAACGAGCTATCCATTTTGATAATGGAATATCGTTTAATTGATTTATATGATTATATGATTAATTGC GTGAACAGATTGCATTAATTATGTACTTAGTTAGTGGATTTTTGATGAGTTGATAAGAGCACTTTTAAGGAATATTTTTGTTGCTGTTGAAATTAGAA GTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTT TTTGTAATTAGCAACGAAGTGTGGATAACTATACGAAATTGGAGCTGATCAAGCA CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAGGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATA CCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCAGGACGAGTGGATTGAGCGAATTGCACTTATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCA ]
[-] EMBL CNS092QZ [ TTGCTGTTGAAATTAGAA GTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTT TTTGTAATTAGCAACGAAGTGT GATAACTATACGAAATTGGAGCTGATCAAG A CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATAGCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAG CCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTT TTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGC TGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGGTGGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCAC ]
[-] EMBL BM592356 [ ATTGCCTATTTGGGAGATCTATTTAGTGTTTTTTTTTTTTGTTTGTAATTAGCAACGAAGTGT GATTACGGTACAAAATTGAAGCTGATCAAG A CCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACcgg ]
[-] EMBL CNS09HXL [ GATCTATTTAGTGTTTTTT TTTGTAATTAGCAACGAAGTGT GATAACTATACGAAATTGGAGCTGATCAAG ACCCAATCCGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAGGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATAGCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCAGGACGAGTGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGC TGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCACTCCTGGTGGTTTTTCTTCT ]
[+] EMBL CNS09QNC [ CGAATTAGCGATCGAAATGTACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGCAATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATATCTAGACCGTTTTTACTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTA ]
[-] EMBL BM580612 [ TTTACAATACTACTCTCACAATATCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTGTCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCTCTCCTGGTGGTTTTTCcgg ]
[-] EMBL BM596014 [ AATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCTCTCCTGGTGGTTTTTCTTCTGCCGTTCGCTCGG ]
[-] EMBL BM614327 [ TCATGCCGTAAAGATAGTAGAAGACCGATAAAAGGTACACCGCCAGCTTAATCCACCCTTCC CGTAAGCA CGCT CGCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCTCTCCTGGTGGTTTTTCTTCTGCCGTTCGCTCGG ]
[-] EMBL CNS08H12 [ CAACCTTCCGCGTAAGCAGCGCTGCGCAACACATCCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATAGCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGC TGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCACTCCT GTGGTTTTTCTT TGC ]
[-] EMBL BX602529 [ GCAACACAT CCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGCCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATAGCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGC TGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTT GTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCACTCCTGGTGGTTTTTCTTCTGCCGTTCGCTAGCGCTTACAAGCTGTGTGTGTATTTTTGTTCACCGC]
consensusID : consensus_9435#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 771 fasta sequence
[AACGATAAACTTTAAACTTCGGGGTGTTATAACACCGGGTGCCCGGGATAACTTCAGGAAACCTCGCNTCCGGGGGTATAAACATTAATCACGTCTTAAACGGNGTCGTCTCCGGGAATCCGCACCGGGAANCTTGAACGGCCTCCAAGTGTGTGTTGCGGGNCCTCCGCCCGGGGTATACTNTGAGCAAGTGTTAACGGGTGGTAACAAACTCNCCAATGCGGCACCCAACTANAGAANCTTTTTTGGGNANAACCCCAACAGGCATAACCTTAAACTTGGGTTAAGCGCCCCACGGTTTAAACCTCCGCCGGGGCCTGAGGGGTATCGGTTAGACCTGGGGTAACTTTTTGGAAATGGCCCCTGGTAATATTGTTGAGACCGAAATGCCCATTAGGGGAAACCTTTCCAGGTAATTCCGGGCGTCTATCTTCATCATCGGTTAAAGCCTACGACTGGTTCCGTCTGCACNAACGCTTCGCTCGGAAAGGGGCCAATGTCCACCCGTTGGGAAGATTGCGAAAAGGAACTATGAGAAAAGGTCATCGATAATTTAACTCGCCCACCGATTGTAGNTAAAGTGGGCGGGTGNAAGTTACAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCAACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGCGCGTTTGCTGATTTGTACACTCTCTCTTNNCCTCGGGGGCGAT]
[-] EMBL AL932439 [AACGATAAACTTTAAACTTCGGGGTGTTATAACACCGGGTGCCCGGGATAACTTCAGGAAACCTCGCNTCCGGGGGTATAAACATTAATCACGTCTTAAACGGNGTCGTCTCCGGGAATCCGCACCGGGAANCTTGAACGGCCTCCAAGTGTGTGTTGCGGGNCCTCCGCCCGGGGTATACTNTGAGCAAGTGTTAACGGGTGGTAACAAACTCNCCAATGCGGCACCCAACTANAGAANCTTTTTTGGGNANAACCCCAACAGGCATAACCTTAAACTTGGGTTAAGCGCCCCACGGTTTAAACCTCCGCCGGGGCCTGAGGGGTATCGGTTAGACCTGGGGTAACTTTTTGGAAATGGCCCCTGGTAATATTGTTGAGACCGAAATGCCCATTAGGGGAAACCTTTCCAGGTAATTCCGGGCGTCTATCTTCATCATCGGTTAAAGCCTACGACTGGTTCCGTCTGCACNAACGCTTCGCTCGGAAAGGGGCCAATGTCCACCCGTTGGGAAGATTGCGAAAAGGAACTATGAGAAAAGGTCATCGATAATTTAACTCGCCCACCGATTGTAGNTAAAGTGGGCGGGTGNAAGTTACAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCAACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGCGCGTTTGCTGATTTGTACACTCTCTCTTNNCCTCGGGGGCGAT]
consensusID : consensus_9435#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 657 fasta sequence
[TAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTATCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCCCGTAAGCACGCTCGCAACACATCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCTCTCCTGGTGCCCACGCGTCCGCGG]
[-] EMBL BM581598 [TAAAGCTCACTCGACGGAGGCTCGTGTCTTGGTGTATCACTTGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCCCGTAAGCACGCTCGCAACACATCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTTGCTGATTGTACACTCTCTCCTGGTGCCCACGCGTCCGCGG]
[-] EMBL AGA282455 [ TAGAAGAACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCCCGTAAGCACGCTCGCAACACATCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGT ]
consensusID : consensus_9435#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 488 fasta sequence
[ATCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGACGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGCGCGTTNTGCTGATTGTACACTCTCTCTTGACCTCGGGGC]
[-] EMBL AL933446 [ATCCGTATTCATGATGCTGGTTGGATCGTACAGTCCCGGCTGCGACATAACCGGCCTGTTAGCGTACCTCCATATATGGTACGCGATGACGGTATATTTAGGGCGAGCGATAGCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCAGGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCTCGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATGCCACGATGTAGCTAAATGCGGGGAAGTTAAACGCCATCCTTGTTTTCTTTTCTGTTGGTCCGGCACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGGGTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGCGCGTTNTGCTGATTGTACACTCTCTCTTGACCTCGGGGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9435#0 GTGAGTTATCATTACGTTGTTAGTAATTTCGAAAAGGGTTCAGTTTGGTTTATTGAGTAC 60
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 AGGAAAACATCGTGTGTCTGTGTCTCCGTATATGCGTTGTCATTCGCTCTACACACCCAT 120
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 TGTATAATTCTATTCACTGATCTGAGAGTGTCCTGTCTGATGCTTGCACTGGCCGTTTGA 180
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 TTATCGTCAAGATCGTCTACCGTTGCCAACCCTCTTTCAATCGCCCAGTTGCAACAGCAG 240
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 TTGGCAGTCGAAAAAGGGGGAATGAAATTATGCATAAATGAACGGAATAAATAAGTATTC 300
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 ACTAGTCGTCAGTCACTGGACGATCAGATGACTCCTTCCCGGTATTATAGTTGATGAATG 360
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 AAAATAAAGACTTTATATTACAGTGTTTCTTTTTTTTCAATCGCTAACACGGGCTTGTCT 420
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 TGATATTGAATTAGTTGCGAACGAGCTATCCATTTTGATAATGGAATATCGTTTAATTGA 480
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 TTTATATGATTATATGATTAATTGCGTGAACAGATTGCATTAATTATGTACTTAGTTAGT 540
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 GGATTTTTGATGAGTTGATAAGAGCACTTTTAAGCAATATTTTTGTTGCTGTTGAAATTA 600
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 GAAGTTATATTGCCTATTTGGGAGATCTATTTAGTGTTTTTTTTTGTAATTAGCAACGAA 660
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 GTGTGATAACTATACGAAATTGGAGCTGATCAAGACCAATCCGAATTAGCGATCGAAATG 720
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ------------------------------------------------------------
consensus_9435#0 TACTGCAGCCAGGTGAAACGTTCAGAGCGAACGGAACATTACAAAAGCAATAATCATGGC 780
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ----------------------AACGATAAACTTTAAACTTCGG--GGTGTTATAACACC 36
consensus_9435#0 AATTAGTTACGCGATCCTTTTTGTTTCCTTTCTTTGCTTTACAATACTACTCTCACAATA 840
consensus_9435#2 ------------------------------------------------------------
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 GGGTGCCCGGGATAACTTCAGGAAACCTCGCNTCCGGGGGTATAAACATTAATCACGTCT 96
consensus_9435#0 TCTAGACCGTTTTTTCTTAAAGCTCACTCGACGGAGGCTCGT--GTCTTGGTGTGTCACT 898
consensus_9435#2 -----------------TAAAGCTCACTCGACGGAGGCTCGT--GTCTTGGTGTATCACT 41
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 TAAACGGNGTCGTCTCCGGGAATCCGCACCGGGAANCTTGAACGGCCTCCAAGTGTGTGT 156
consensus_9435#0 TGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAG 958
consensus_9435#2 TGCCGCCTTGCCGTTTACGATGCAATCAGAGCCATTATCATGCCGTAAAGATAGTAGAAG 101
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 TGCGGGNCCTCCGCCCGGGGTATACTNTGAGCAAGTGTTA------ACGGGTGGTAACAA 210
consensus_9435#0 AACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCCCGTAAGCACGCTCGCAA-CAC 1017
consensus_9435#2 AACGATAAAAGGTACACCGCCAGCTTAATCCAACCTTCCCGTAAGCACGCTCGCAA-CAC 160
consensus_9435#3 ------------------------------------------------------------
consensus_9435#1 ACTCNCCAATGCGGCACC--CAACTANAGAANCTTTTTTGGGNANAACCCCAACAGGCAT 268
consensus_9435#0 ATCCGTATTCATGA--TGCTGGTTGGATCGTACAGTCC-CGGCTGCGACATAACCGGCCT 1074
consensus_9435#2 ATCCGTATTCATGA--TGCTGGTTGGATCGTACAGTCC-CGGCTGCGACATAACCGGCCT 217
consensus_9435#3 ATCCGTATTCATGA--TGCTGGTTGGATCGTACAGTCC-CGGCTGCGACATAACCGGCCT 57
consensus_9435#1 AACCTTAAACTTGGGTTAAGCGCCCCACGGTTTAAACCTCCGCCGGGGCCTGAGGGGTAT 328
* ** ** * ** * * * ** * ** * ** * * * * * ** *
consensus_9435#0 --GTTAG-CGTACCTCCATATATGGTACGCGATGAGCGGTATGTTTAGGGCGAGCGATA- 1130
consensus_9435#2 --GTTAG-CGTACCTCCATATATGGTACGCGATGAGCGGTATATTTAGGGCGAGCGATA- 273
consensus_9435#3 --GTTAG-CGTACCTCCATATATGGTACGCGATGA-CGGTATATTTAGGGCGAGCGATA- 112
consensus_9435#1 CGGTTAGACCTGGGGTAACTTTTTGGAAATGGCCCCTGGTAATATTGTTGAGACCGAAAT 388
***** * * * * * * * * **** ** * ** *** *
consensus_9435#0 GCCATTCGCCCGAAAACAGGAACAGCAAATTGAACAGTATATGCAGCCCGTACTCCGGCA 1190
consensus_9435#2 GCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCA 333
consensus_9435#3 GCCATTCGCCCGAAAATAGGAACAGCAAATTGAACAGTATATGTAGCCCGTACTCCGGCA 172
consensus_9435#1 GCCCATTAGGGGAAACCTTTCCAGGTAATTCCGGGCGTCTATCT---TCATCATCGGTTA 445
*** * **** * ** * ** *** * * ** * *
consensus_9435#0 GGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCT 1250
consensus_9435#2 GGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCT 393
consensus_9435#3 GGACGAGCGGATTGAGCGAATTGCACTGATCGATCGGGTTTTTGTAGTCCGTCTTCAGCT 232
consensus_9435#1 AAGCCTACGACTGGTTCCGTCTGCACNAACGCTTCGCTCGGAAAGGGGCCAATGTCCACC 505
* ** * * * ***** * *** * ** ** *
consensus_9435#0 CGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATG 1310
consensus_9435#2 CGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATG 453
consensus_9435#3 CGTCGAAGGCAATCACGTGGAAGATGGAAAAGAATATGAGAAAGGCATCGATAATTAATG 292
consensus_9435#1 CGTTGG-GAAGATTGCGAAAAGGA------ACTATGAGAAAAGGTCATCGATAATTTAAC 558
*** * * ** ** * ** * ** ** ** * *********** *
consensus_9435#0 CCAC------GATGTAGCTAAA-----TGCGGGGAAGTTA-AACGCCATCCTTGTTTTCT 1358
consensus_9435#2 CCAC------GATGTAGCTAAA-----TGCGGGGAAGTTA-AACGCCATCCTTGTTTTCT 501
consensus_9435#3 CCAC------GATGTAGCTAAA-----TGCGGGGAAGTTA-AACGCCATCCTTGTTTTCT 340
consensus_9435#1 TCGCCCACCGATTGTAGNTAAAGTGGGCGGGTGNAAGTTACAACGCCATCCTTGTTTTCT 618
* * ***** **** * * * ****** *******************
consensus_9435#0 TTTCTGTTGGTCCGGCA-CAATCAGTTCAGTCGGTGCAGGCTGCTGT--CTTCGGCTGGG 1415
consensus_9435#2 TTTCTGTTGGTCCGGCA-CAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGG 560
consensus_9435#3 TTTCTGTTGGTCCGGCA-CAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGG 399
consensus_9435#1 TTTCTGTTGGTCCGGCAACAATCAGTTCAGTCGGTGCAGGCTGCTGTGTCTTCGGCTGGG 678
***************** ***************************** ***********
consensus_9435#0 GTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTT-GC 1474
consensus_9435#2 GTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTGGCGCGTTT-GC 619
consensus_9435#3 GTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTG-CGCGTTNTGC 458
consensus_9435#1 GTTTGTTTCGTAAGAATTTTGTTGACGGAGCGGGCTCAGCGTCTGAGTG-CGCGTTT-GC 736
************************************************* ****** **
consensus_9435#0 TGATT-GTACACTCACTCCTGGTGGTTTTTCTTCTGCCGTTCGCTCGGGCTTACAAGCTG 1533
consensus_9435#2 TGATT-GTACACTCTCTCCTGGTGCCCACGCGTCCGCGG--------------------- 657
consensus_9435#3 TGATT-GTACACTCTCTCTTGACCTCGGGGC----------------------------- 488
consensus_9435#1 TGATTTGTACACTCTCTCTTNNCCTCGGGGGCGAT------------------------- 771
***** ******** *** *
consensus_9435#0 TGTGTGTATTTTTGTTCACCGC 1555
consensus_9435#2 ----------------------
consensus_9435#3 ----------------------
consensus_9435#1 ----------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||