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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9454#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1179 fasta sequence
[CCGCCCACGCGTCCGCACGCAAACGATGAGATCAGCACCCAGGACAGGAAATAACCAACAAGATGATGGAGCAAGAAACGTGTGTGTGTGTGTATGTGTAAAATGCAAAATGCAAACGAAAGTGGTGTTTTTGAATAGGATTTAAACACACACACACACCCTCAACCCAACGAGAGAGCCCTCAACGACCGCGTGCAGAACTGCCCCCCAGCCACCCCCTACACCACCACCATCATCCCAGAACCAAACAACCCCCAAACAAGAAATGGACTACAAAAACACATGTGGCTGCACGCGTGAGTGTTCTCTTGTTTTCATTACTTTTATTAAGTAATCTGTATTAGCTGGTAAGCAGACTATAAGAATTTTACAATAGACTACCCGCGGAAACTTACTGAGGAAAATTTGAACTATGAATAGTTTTACACATACAAAAACGTATATCGACATCGATCGAACAGAGGAGAGGACATACAAACAATTGCATTGCAAAATGAAAGAGAGAGCAAATACCTTCTTGATGAAGGTAAGAGAAGAGTATTCGACGACATAAACACGCAGTAGGACGCGCGGATCAGAGAAGGCCAAGGGGGCCTACCTTTCAACGACACAGCAAAGTTGTGAGTGGCGACAGTGCATACGAGTGAACCACAAAAAGTATTTGATAAAATTTCACCCCTCCCCGTTTTACCACACTCCTGTGGGTGTATGTGTGTGTGCGCGAGTGATACGTTAAATCTCGAAACGTTCTTGTATATTTTCTCCAACGTAATCAACTTTCTTTTGCTTTGCTGCAATAGTCAAGCGACGAAAGCTAGCTATCGTCAATCGTGGACGTATATTTGTTTACTCCATATTTCACACACATACACATTTTGAACGTCCTGGCTCCCTCTCCTATACACTTGCCGTTTCCTCTCAAATCCTTTAAGTGTAGAGTAAGACATTAAAGCAGGCTAGAGAATGATGGTGGCGCGCACGTGCGTCTTCTTTGCCCGCACGTGCTCTGCGCCATCATCGTAGTAATCATCGCCATCATCACTTTCGGTTTGAGTATTTTCTCTCCCCCTTTCACACAAATATTGTTTTATTCGCGGTGCAGCAATAGTGCGCAGCCCTGCAGCGAACAGCTTTCCGCCCTCCTAAGGGATGTTGGCCCAGCCGCGCGCGCTCGCAAGG]
[+] EMBL BM627245 [CCGCCCACGCGTCCGCACGCAAACGATGAGATCAGCACCCAGGACAGGAAATAACCAACAAGATGATGGAGCAAGAAACGTGTGTGTGTGTGTATGTGTAAAATGCAAAATGCAAACGAAAGTGGTGTTTTTGAATAGGATTTAAACACACACACACACCCTCAACCCAACGAGAGAGCCCTCAACGACCGCGTGCAGAACTGCCCCCCAGCCACCCCCTACACCACCACCATCATCCCAGAACCAAACAACCCCCAAACAAGAAATGGACTACAAAAACACATGTGGCTGCACGCGTGAGTGTTCTCTTGTTTTCATTACTTTTATTAAGTAATCTGTATTAGCTGGTAAGCAGACTATAAGAATTTTACAATAGACTACCCGCGGAAACTTACTGAGGAAAATTTGAACTATGAATAGTTTTACACATACAAAAACGTATATCGACATCGATCGAACAGAGGAGAGGACATACAAACAATTGCATTGCAAAATGAAAGAGAGAGCAAATACCTTCTTGATGAAGGTAAGAGAAGAGTATTCGACGACATAAACACGCAGTAGGACGCGCGGATCAGAGAAGGCCAAGGGGGCCTACCTTTCAACGACACAGCAAAGTTGTGAGTGGCGACAGTGCATACGAGTGAACCACAAAAAGTATTTGATAAAATTTCACCCC ]
[+] EMBL BM613628 [ ccgGAGAGAGCAAATACCTTCTTGATGAAGGTAAGAGAAGAGTATTCGACGACATAAACACGCAGTAGGACGCGCGGATCAGAGAAGGCCAAGGGGGCCTACCTTTCAACGACACAGCAAAGTTGTGAGTGGCGACAGTGCATACGAGTGAACCACAAAAAGTATTTGATAAAATTTCACCCCTCCCCGTTTTACCACACTCCTGTGGGTGTATGTGTGTGTGCGCGAGTGATACGTTAAATCTCGAAACGTTCTTGTATATTTTCTCCAACGTAATCAACTTTCTTTTGCTTTGCTGCAATAGTCAAGCGACGAAAGCTAGCTATCGTCAATCGTGGACGTATATTTGTTTACTCCATATTTCACACACATACACATTTTGAACGTCCTGGCTCCCTCTCCTATACACTTGCCGTTTCCTCTCAAATCCTTTAAGTGTAGAGTAAGACATTAAAGCAGGCTAGAGAATGATGGTGGCGCGCACGTGCGTCTTCTTTGCCCGCACGTGCTCTGCGCCATCATCGTAGTAATCATCGCCATCATCACTTTCGGTTTGAGTATTTTCTCTCCCCCTTTCACACAAATATTGTTTTATTCGCGGTGCAGCAATAGTGCGCAGCCCTGCAGCGAACAGCTTTCCGCCCTCCTAAGGGATGTTGGCCCAGCCGCGCGCGCTCGCAAGG]
consensusID : consensus_9454#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 957 fasta sequence
[CACAGATTACGTGTACGATTTATTTGCCAAAAAACTCCAATCCAATCAACGGTTCGATACAAAACTGATCAATCGACAAACAACAAACGCTCCACTGCGCATGGGAATGAAACCTACGGCAGCAATACCGCGTTGATGCAACCGTCGTTCTCCGGGTTGTTCGTCACCTGGGCGTACTTTCCCCACACCACCTTGCCGGACTGTGTGACGAGACCGAGCTCGGAAATGTTCACCTCAATCACCGTACCCTTGGTGATGACGCCCAAGCTCGTGTACATCGGCGAGGAGGGATTCTTCTTCACGCCAATAATCGGCAGATGGAAGGTGGCCTTCAGCTCCGGGTGCGTCACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTAAAGTTCTCGCCGACGTACGTCACCTTCGTGACCATACGCTTCCAGGCCTTGCGCTTCGTCTTGCCGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTGGGCGCGCACCTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTTGATCATGTTCGACAGCACCTTGGCGTTCGATTGGATGCCACGATCCATCAGGTACGGGGGCAGCGCACCGTCCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGCCTGGATCTTGCGCTTCATTTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGCTTCGCCTTCATGCCCCGCAGCTTGCGGGCCATGGCGGCGCGCTTCTTCGGCTCGCGAGCCTCCCGCTTACGCTTGCGCTCCTCATAATCGAGCCGGCGACCGTACAGCTTAATGTGCCGCTCAATATACTCGTTATGCGGCATGGTGAATGATGTTGCTTAGAGTGAGCATACGGGCTTACTCTGACACCATCGGACGCGTGGGCGG]
[+] EMBL CNS09EPK [CACAGATTACGTGTACGATTTATTTGCCAAAAAACTCCAATCCAATCAACGGTTCGATACAAAACTGATCAATCGACAAACAACAAACGCTCCACTGCGCATGGGAATGAAACCTACGGCAGCAATACCGCGTTGATGCAACCGTCGTTCTCCGGGTTGTTCGTCACCTGGGCGTACTTTCCCCACACCACCTTGCCGGACTGTGTGACGAGACCGAGCTCGGAAATGTTCACCTCAATCACCGTACCCTTGGTGATGACGCCCAAGCTCGTGTACATCGGCGAGGAGGGATTCTTCTTCACGCCAATAATCGGCAGAAGGAAGGTGGCCTTCAGCTCCGGGTGCGTCACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTAAAGTTCTCGCCGACGTACGTAACCTTCGTGACCATACGCTTCCAGGCCTTGCGCTTCGTCTTGCCGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTGGGCGCGCACCTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTTGATCATGTTCGAAAGCACCTTGGCGTTCGATTGGATGCCACGATCCATCAGGTACGGGGGCAGCGCACCGTCCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGCCTGGATCTTGCGCTTCATTTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGCTTCGCCTTCATGCCCCGCAGCTTGCGGGCCATGGCGGCGCGCTTCTTCGGCTCGCGAGCCTCCCGCTTACGCTTGCGCTCCTCAAAATCGAGCCGGCGACCGTACAGCTTAAT ]
[+] EMBL CNS09GHC [ gcTTTATTTGCCAAATAACTCCAATCCAATCAACGGTTCGATACAAAACTGATCAATCGACAAACAACAAACGCTCCACTGCGCATGGGAATGAAACCTACGGCAGCAATACCGCGTTGATGCAACCGTCGTTCTCCGGGTTGTTCGTCACCTGGGCGTACTTTCCCCACACCACCTTGCCGGACTGTGTGACGAGACCGAGCTCGGAAATGTTCACCTCAATCACCGTACCCTTGGTGATGACGCCCAAGCTCGTGTACATCGGCGAGGAGGGATTCTTCTTCACGCCAATTATCGGCAGATGGAAGGTGGCCTTCAGCTCCGGGTGCGTCACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTAAAGTTCTCGCCGACGTACGTGACCTTCGTGACCATACGCTTCCAGG CTTGCGCTTCGTCTTGCCGCTCCGGATCACCTTAAACACC ]
[-] EMBL CNS09EPJ [ AAACTGATCAATCGACAAACAACAAACGCTCCACTGCGCATGGGAATGAAACCTACGGCAGCAATACCGCGTTGATGCAACCGTCGTTCTCCGGGTTGTTCGTCACCTGGGCGTACTTTCCCCACACCACCTTGCCGGACTGTGTGACGAGACCGAGCTCGGAAATGTTCACCTCAATCACCGTACCCTTGGTGATGACGCCCAAGCTCGTGTACATCGGCGAGGAGGGATTCTTCTTCACGCCAATGATCGGCAGATGGAAGGTGGCCTTCAGCTCCGGGTGCGTCACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTAAAGTTCTCGCCGACGTACGTCACCTTCGTGACCATACGCTTCCAGGCCTTGCGCTTCGTCTTGCCGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTGGGCGCGCA CTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTTGATCATGTTCGACAGCACCTTGGCGTTCGATTGGATGCCACGATCCATCAGGTACGGGGGCAGCGCACCGTCCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGCCTGGATCTTGCGCTTCATTTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGTTGCGCCTTCATGCCCCGCAGCTTGCGGGCCATGGCGGCGCGCTTCTTCGGCTCGCGAGCCTCtgc ]
[-] EMBL BM611754 [ TCACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTAAAGTTCTCGCCGACGTACGTCACCTTCGTGACCATACGCTTCCAGGCCTTGCGCTTCGTCTTGCCGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTGTGCGCGCACCTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTTGATCATGTTCGACAGCACCTTGGCGTTCGATTGGATGCCACGATCCATCAGGTACGGGGGCAGCGCACCGTCCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGCCTGGATCTTGCGCTTCATTTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGCTTCGCCTTCATGCCCCGCAGCTTGCGGGCCATGGCGGCGCGCTTCTTCGGCTCGCGAGCCTCCCGCTTACGCTTGCGCTCCTCATAATCGAGCCGGCGACCGTACAGCTTAATGTGCCGCTCAATATACTCGTTATGCGGCATGGTGAATGATGTTGCTTAGAGTGAGCATACGGGCTTACTCTGACACCATCGGACGCGTGGGCGG]
[-] EMBL BM598704 [ CATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTGAAGTTCTCGCCGACGTACGTCACCTTCGTGACCATACGCTTCCAGGCCTTGCGCTTGGTCTTGCCGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTGGGCGCGCACCTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTTGATCATGTTCGACAGCACCTTGGCGTTCGATTGGATGCCACGATCCATCAGGTACGGGGGCAGCGCACCGTCCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGCCTGGATCTTGCGCTTCATTTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGCTTCGCCTTCATGCCCCTCAGCTTGCGGGCCATGGCGGCACGCTTCTTCGGCTCGCGAGCCTCCCGCTTACGCTTGCGCTCCTCATAATCGAGCCGGCGACCGTACAGCTTAATGTGCCGCTCAATATACTCGTTCTGCGGCATGGTGAATGATGTTGCTTAGAGTGAGCGTACGGGCTTACTCTGAC CGGACGCGTGGGCGG]
consensusID : consensus_9454#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 661 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG---CTTTTAGCTGTGTAGCTGAAGTAGTTCGTGTAACAACGATTTTCTTCAGCTTAAATATATTGTTTAAAGCTAAACCAAAACAACATCTACCGTTTTCCCAATATTAGCAATGGCTGCGTTTGTGGAACCTCACTTCGATGCCTGGACGCAGAGCGGTGGCAACATGTCCGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAACGGTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTTGACCGTTACAACGTCATCGTGAA-GGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGGGGCGT]
[+] EMBL BM583885 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG CTTTTAGCTGTGTAGCTGAAGTAGTTCGTGTAACAACGATTTTCTTCAGCTTAAATATATTGTTTAAAGCTAAACCAAAACAACATCTACCGTTTTCCCAATATTAGCAATGGCTGCGTTTGTGGAACCTCACTTCGATGCCTGGACGCAGAGCGGTGGCAACATGTCCGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAACGGTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTTGACCGTTACAACGTCATCGTGAA GGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGGGGCGT]
[+] EMBL BM633871 [ CCGCCCACGCGTCCGATTCTTTTAGCTGTGTAGCTGAAGTAGTTCGTGTAACAACGATTTTCTTCAGCTTAAATATATTGTTTAAAGCTAAACCAAAACAACATCTACCGTTTTCCCAATATTAGCAATGGCTGCGTTTGTGGAACCTCACTTCGATGCCTGGACGCAGAGCGGTGGCAACATGTCGGTGGTGGATAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAATCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAACGGTTGCGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCGTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGGCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTTGACCGTTACAACGTCATCGTGAAGGGGTCTCGCGGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCT ]
[+] EMBL BM643789 [ CCGCGGACGCGTGGG CTTTTAGCTGTGTAGCTGAAGTAGTTCGTGTAACAACGATTTTCTTCAGCTTAAATATATTGTTTAAAGCTAAACCAAAACAACATCTACCGTTTTCCCAATATTAGCAATGGCTGCGTTTGTGGAACCTCACTTCGATGCCTGGACGCAGAGCGGTGGCAACATGTCCGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAACGGTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTTGACCGTTACAACGTCATCGTGAA GGGTCTCGCCGGCAAGCCGA ]
consensusID : consensus_9454#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 631 fasta sequence
[CCGTTTTCTTCTTCTTTTCTTATCGATCACTAACTAACCATGCAAATGTATTAAAATCGTGCAAAATCGTACTTCGATCCTTCAACGTTACACATACACACTTTGCGTTTCGCGCTACCATTCACCTCTAAAACTTAACAATTCAATGATGATACGTACCTTCAAAATCCCAATTTCTGTGCATCATCGGCATCCGTACGTTCCTGCGCTAACATTCGCTGCACCCTTTCCCCTGTGCCCGGTACCTGTGCGTGTATGTGTGTGTATGTGTACGATCGTGCTAAAAAACACACTGCCCCATGCTCCAAAAACCAATCAACATTTTGTGCCCGATGACCTGCTCATCATCATTCGGCTTGGAATATGCGATCATAATATACACACCACCATCCAATGTCAAACGAACACATCGCTCACATGCACTAATCCACCACCCCTTAACCACACACTACGATGTCCTTGTACTATACTTTGTGTGCGTGTGTGCGTGTTCGTGTATGTGATGTACACAGGTACCCGCTATTTCACTTGCCTACGAGGAAGCCGAATCCGATATCATGAAACGCCAGCCCCGTAACCCGTTCACTGATAAATTGGTCAACGAAAGACTTATCTCGATGGCTTACGGTCA]
[+] EMBL BM639124 [CCGTTTTCTTCTTCTTTTCTTATCGATCACTAACTAACCATGCAAATGTATTAAAATCGTGCAAAATCGTACTTCGATCCTTCAACGTTACACATACACACTTTGCGTTTCGCGCTACCATTCACCTCTAAAACTTAACAATTCAATGATGATACGTACCTTCAAAATCCCAATTTCTGTGCATCATCGGCATCCGTACGTTCCTGCGCTAACATTCGCTGCACCCTTTCCCCTGTGCCCGGTACCTGTGCGTGTATGTGTGTGTATGTGTACGATCGTGCTAAAAAACACACTGCCCCATGCTCCAAAAACCAATCAACATTTTGTGCCCGATGACCTGCTCATCATCATTCGGCTTGGAATATGCGATCATAATATACACACCACCATCCAATGTCAAACGAACACATCGCTCACATGCACTAATCCACCACCCCTTAACCACACACTACGATGTCCTTGTACTATACTTTGTGTGCGTGTGTGCGTGTTCGTGTATGTGATGTACACAGGTACCCGCTATTTCACTTGCCTACGAGGAAGCCGAATCCGATATCATGAAACGCCAGCCCCGTAACCCGTTCACTGATAAATTGGTCAACGAAAGACTTATCTCGATGGCTTACGGTCA]
consensusID : consensus_9454#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 373 fasta sequence
[CAAACACACACACACGCACACGTGGTGGTGATCACTTTGAAGAAGGCGAAGGAGTAATTAGAGTATATTTGAAAATGGTTCCTTTCTGTTTCTCTCAACCTAGTAGGCCCGCCACTGGCGCTCGTCTGTCTGTATCGTTTCTTACCTTTGTTGTATATTACTTCTGTCTCTTATTTATGTTTGATGTCTATGTAACACCATCTCTGCTTGATGGGACGAGGCGGCGAGAAAACGGTTAAATTAAATAGTAGATGTAGAATGAAGAGCGAAAAAAAAAACACAAGAACCACTGTCGCCGTTAATATAAACTGTACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTCGACGTACAACGTGCTGAAGC]
[+] EMBL CNS09IDV [CAAACACACACACACGCACACGTGGTGGTGATCACTTTGAAGAAGGCGAAGGAGTAATTAGAGTATATTTGAAAATGGTTCCTTTCTGTTTCTCTCAACCTAGTAGGCCCGCCACTGGCGCTCGTCTGTCTGTATCGTTTCTTACCTTTGTTGTATATTACTTCTGTCTCTTATTTATGTTTGATGTCTATGTAACACCATCTCTGCTTGATGGGACGAGGCGGCGAGAAAACGGTTAAATTAAATAGTAGATGTAGAATGAAGAGCGAAAAAAAAAACACAAGAACCACTGTCGCCGTTAATATAAACTGTACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTCGACGTACAACGTGCTGAAGC]
consensusID : consensus_9454#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 369 fasta sequence
[AGGCAAGAATCGGCACGATGNAAAAAGCCCAAGTGTCGTCCCCCCAGTGTGTGTTCTCAGTGCTCAAAATGCGTGAATATAAAATCGTCGTGCTTGGTAGCGGAGGTGTCGGCAAATCGGCCCTGACAGTGCAGTTTGTCCAGGGCATATTTGTGGAAAAGTACGANCCAAGCGATAGAGGACAGCTACCGGAAACAGGTCGAGGTGGACGGTCAGCGAANTGCAGTGTTGGGAAAGTTTTGGACACGGGCCGGCGACAGAACAATTCACCGGCATGCGAGACCGTGTACATGANAAGAATGGGCAAGGAGTTCGTGCTAGTATATTCCATCAGCGTGCACAGTCGACCTTCAAACGATCTGCAGGACC]
[+] EMBL BX468387 [AGGCAAGAATCGGCACGATGNAAAAAGCCCAAGTGTCGTCCCCCCAGTGTGTGTTCTCAGTGCTCAAAATGCGTGAATATAAAATCGTCGTGCTTGGTAGCGGAGGTGTCGGCAAATCGGCCCTGACAGTGCAGTTTGTCCAGGGCATATTTGTGGAAAAGTACGANCCAAGCGATAGAGGACAGCTACCGGAAACAGGTCGAGGTGGACGGTCAGCGAANTGCAGTGTTGGGAAAGTTTTGGACACGGGCCGGCGACAGAACAATTCACCGGCATGCGAGACCGTGTACATGANAAGAATGGGCAAGGAGTTCGTGCTAGTATATTCCATCAGCGTGCACAGTCGACCTTCAAACGATCTGCAGGACC]
[+] EMBL CNS08ORQ [ TAGCGGAGGTGTCGGCAAATCGGCCCTGACAGTTCAGTTTGTCCAGGGCATATTTGTGGAAAAGTACGACCCAA CGATAGAGGAC ]
consensusID : consensus_9454#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 146 fasta sequence
[TTCTTCCGCTTTCATCAGCATCAGCCTTTGCCTTCGCCTTTGCCGGCGCCTTGGTGGCCGTGGTTGCCTTTTTCGCCTTGGCTGCCGCCCTGGCTGCGTCTTTTGCTTCCTTCCGGGCGGCCTTGGCGGCCACGTCCCATTCCTTG]
[+] EMBL CNS09OMC [TTCTTCCGCTTTCATCAGCATCAGCCTTTGCCTTCGCCTTTGCCGGCGCCTTGGTGGCCGTGGTTGCCTTTTTCGCCTTGGCTGCCGCCCTGGCTGCGTCTTTTGCTTCCTTCCGGGCGGCCTTGGCGGCCACGTCCCATTCCTTG]
[+] EMBL CNS09K1P [ TTTCCTTCGCCTTTGCCGGAGCCTTGGTGGCCGTGGTTGCCTTTTTCGCCTTGGCTGCCGCCCTGGCTGCGTCTTTCGCTTCCTTCCGGGCGGCCTTGGCGGCCCCGTCTCGTTCCTT ]
consensusID : consensus_9454#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 137 fasta sequence
[CGATTTTGTCCATCCGGTGGCGGAGGGAGGCATCCAATCAAATGGTAAACCAATCGAGGTGACCCCAAATGGCCATGGGAGCAACGACAGCAGCTTTAGTAGCACCAGCAACAACAACATCGTGCTGGACGGTAACC]
[+] EMBL BM601405 [CGATTTTGTCCATCCGGTGGCGGAGGGAGGCATCCAATCAAATGGTAAACCAATCGAGGTGACCCCAAATGGCCATGGGAGCAACGACAGCAGCTTTAGTAGCACCAGCAACAACAACATCGTGCTGGACGGTAACC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9454#1 -------------CACAGATTACGTGTACGATTTATTTGCCAAAAAACTCCAATCCAATC 47
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ------------------------------------------------------------
consensus_9454#2 ------------------------------------------------------------
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 CCGCCCACGCGTCCGCACGCAAACGATGAGATCAGCACCCAGGACAGGAAATAACCAACA 60
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 AACGGTTCGATACAAAACTGATCAATCGACAAACAACAAACGCTCCACTGCGCATGGGAA 107
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ------------------------------------------------------------
consensus_9454#2 ------------------------------------------------------------
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 AGATGATGGAGCAAGAAACGTGTGTGTGTGTGTATGTGTAAAATGCAAAATGCAAACGAA 120
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 TGAAACCTACGGCAGCAATACCGCGTTGATGCAACCGTCGTTCTCCGGGTTGTTCGTCAC 167
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ---------------------------CCGTTTTCTTCTTCTTTTCTTATCGATCACTAA 33
consensus_9454#2 ----------------------------------------------------CCGCCCAC 8
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 AGTGGTGTTTTTGAATAGGATTTAAACACACACACACACCCTCAACCCAACGAGAGAGCC 180
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 CTGGGCGTACTTTCCCCACACCACCTTGCCGGACTGTGTGACGAGACCGAGCTCGGAAAT 227
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 CTAACCATGCAAATGTATTAAAATCGTGCAAAATCGTACTTCGATCCTTCAACGTTACAC 93
consensus_9454#2 GCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTTTTAGCTGTGTAGCTGAAGTAGTTCGT 68
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 CTCAACGACCGCGTGCAGAACTGCCCCCCAGCCACCCCCTACACCACCACCATCATCCCA 240
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 GTTCACCTCAATCACCGTACCCTTGGTGATGACGCCCAAGCTCGTGTACATCGGCGAGGA 287
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ATACACACTTTGCGTTTCGCGCTACCATTCACCTCTAAAACTTAACAATTCAATGATGAT 153
consensus_9454#2 GTAACAACGATTTTCTTCAGCTTAAATATATTGTTTAAAGCTAAACCAAAACAACATCTA 128
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 GAACCAAACAACCCCCAAACAAGAAATGGACTACAAAAACACATGTGGCTGCACGCGTGA 300
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 GGGATTCTTCTTCACGCCAATAATCGGCAGATGGAAGGTGGCCTTCAGCTCCGGGTGCGT 347
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ACGTACCTTCAAAATCCCAATTTCTGTGCATCATCGGCATCCGTACGTTCCTGCGCTAAC 213
consensus_9454#2 CCGTTTTCCCAATATTAGCAATGGCTGCGTTTGTGGAACCTCACTTCGATGCCTGGACGC 188
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 GTGTTCTCTTGTTTTCATTACTTTTATTAAGTAATCTGTATTAGCTGGTAAGCAGACTAT 360
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 CACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGG 407
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ATTCGCTGCACCCTTTCCCCTGTGCCCGGTACCTGTGCGTGTATGTGTGTGTATGTGTAC 273
consensus_9454#2 AGAGCGGTGGCAACATGTCCGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGC 248
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 AAGAATTTTACAATAGACTACCCGCGGAAACTTACTGAGGAAAATTTGAACTATGAATAG 420
consensus_9454#4 -----------------------------------------------------------C 1
consensus_9454#1 TTTGCGGGTAAAGTTCTCGCCGACGTACGTCAC--------CTTCGTGACCATACGCTTC 459
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 GATCGTGCTAAAAAACACACTGCCCCATGCTCC--------AAAAACCAATCAACATTTT 325
consensus_9454#2 ATCCCCACTGGAACCAGTTCCCGCCCATGAACC--------CGCTGTGGCACTCGATCCT 300
consensus_9454#5 --AGGCAAGAATCGGCACGATGNAAAAAGCCCA--------AGTGTCGTCCCCCCAGTGT 50
consensus_9454#0 TTTTACACATACAAAAACGTATATCGACATCGATCGAACAGAGGAGAGGACATACAAACA 480
consensus_9454#4 AAACACACACACACGCACACGTGGTGGTGATCA-----CTTTGAAGAAGGCGAAGGAGTA 56
consensus_9454#1 CAGGCCTTGCGCTTCGTCTTGC-CGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTG 518
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 GTGCCCGATGACCTGCTCATCA-TCATTCGG-----CTTGGAATATGCGATCATAATATA 379
consensus_9454#2 AGGTTTTGCCATCTTCATGCTC-GGAATGATCTCG-ATGACCGGTAACGGTTGTGTGATG 358
consensus_9454#5 GTGTTCTCAGTGCTCAAAATGCGTGAATATAAAATCGTCGTGCTTGGTAGCGGAGGTGTC 110
consensus_9454#0 ATTGCATTGCAAAATGAAAGAGAGAGCAAATACCTTCTTGATGAAGGTAAGAGAAGAGTA 540
consensus_9454#4 ATTAGAGTATATTTGAAAATGGTTCCTTTCTGTTTCTCTCAACCTAGTAGGCCCGCCACT 116
consensus_9454#1 GGCGCGCACCTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTT 578
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 CACACCACCATCCAATGTCAAACGAACACATCGCTCACATGCACTAATCCACCACCCCTT 439
consensus_9454#2 TACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTG 418
consensus_9454#5 GGCAAATCGGCCCTGACAGTGCAGTTTGTCCAGGGCATATTTGTGGAAAAGTACGANCCA 170
consensus_9454#0 TTCGACGACATAAACACGCAGTAGGACGCGCGGATCAGAGAAGGCCAAGGGGGCCTACCT 600
consensus_9454#4 GGCGCTCGTCTGTCTGTATCGTTTCTTACCTTTGTTGTATATTACTTCTGTCTCTTATTT 176
consensus_9454#1 GATCATGTTCGACAGCACCTTGGCGTTCGATTGGATGCCACGA-TCCATCAGGTACGGGG 637
consensus_9454#6 ------------------------------------------T-TCTTCCGCTTTCATCA 17
consensus_9454#7 ----------------------------------------CGA-TTTTGTCCATCCGGTG 19
consensus_9454#3 AACCACACACTACGATGTCCTTGTACTATACTTTGTGT-GCGT-GTGTGCGTGTTCGTGT 497
consensus_9454#2 GCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGA-TGGTGATCAACTGCTG 477
consensus_9454#5 AGCGATAGAGGACAGC-TACCGGAAACAGGTCGAGGTGGACGG-TCAGCGAANTGCAGTG 228
consensus_9454#0 TTCAACGACACAGCAAAGTTGTGAGTGGCGACAGTGCATACGAGTGAACCACAAAAAGTA 660
consensus_9454#4 ATGTTTGATGTCTATGTAACACCATCTCTGCTTGATGGGACGAGGCGGCGAGAAAACGGT 236
consensus_9454#1 GCAGCGCACCGT--CCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGC 695
consensus_9454#6 GCATCAGCCTTTG-CCTTCGCCTTTGCCGGCGCCTTGGTGGCCGTGGTTGCCTTTTTCGC 76
consensus_9454#7 GCGGAGGGAGG-------CATCCAATCAAATGGTAAACCAATCGAGGTGACCCCAAATGG 72
consensus_9454#3 ATGTGATGTACA--CAGGTACCCGCTATTTCACTTGCCTA--CGAGGAAGCCGAATCCGA 553
consensus_9454#2 GCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCAT-GCTGGGATCGC 536
consensus_9454#5 TTGGGAAAGTTTTGGACACGGGCCGGCGACAGAACAATTCACCGGCAT--GCGAGACCGT 286
consensus_9454#0 TTTGATAAAATTTCACCCCTCCCCGTTTTACCACACTCCTGTGGGTGTATGTGTGTGTGC 720
consensus_9454#4 TAAATTAAATAGTAGATGTAGAATGAAGAGCGAAAAAAAAAACACAAGAACCACTGTCGC 296
*
consensus_9454#1 CTGGATCTTGCGCTTCAT-TTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGCTTCG 754
consensus_9454#6 CTTGG-CTGCCGCCCTGG-CTGCGTCTT----TTGC----TTCCTTCCGGGCGGCCTTGG 126
consensus_9454#7 CCATG---GGAGCAACGA-CAGCAGCTT----TAGT-----AGCACCAGCAACAACAACA 119
consensus_9454#3 TATCATGAAACGCCAGCC-CCGTAACCCGTTCACTGATAAATTGGTCAACGAAAGACTTA 612
consensus_9454#2 TGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTTGACCGTTACAACGTCA 596
consensus_9454#5 GTACATGANAAGAATGGGCAAGGAGTTCGTGCTAGTATA-TTCCATCAGCGTGCACAGTC 345
consensus_9454#0 GCGAGTGATACGTTAAATCTCGAAACGT--TCTTGTATATTTTCTCCAACGTAATCAACT 778
consensus_9454#4 CGTTA-------ATATAAACTGTACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT 349
*
consensus_9454#1 CCTTCATGCCCCGCAGCTTGCGGGCCATGGCGGCGCGCTTCTTCGGCTCGCGAGCCTCCC 814
consensus_9454#6 CGGCCACGTCCCATTCCTTG---------------------------------------- 146
consensus_9454#7 TCGTGCTGGACGGTAACC------------------------------------------ 137
consensus_9454#3 TCTCGATGGCTTACGGTCA----------------------------------------- 631
consensus_9454#2 TCGTGAAGGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGG 656
consensus_9454#5 GACCTTCAAACGATCTGCAGGACC------------------------------------ 369
consensus_9454#0 TTCTTTTGCTTTGCTGCAATAGTCAAGCGACGAAAGCTAGCTATCGTCAATCGTGGACGT 838
consensus_9454#4 TTTCGACGTACAACGTGCTGAAGC------------------------------------ 373
consensus_9454#1 GCTTACGCTTGCGCTCCTCATAATCGAGCCGGCGACCGTACAGCTTAATGTGCCGCTCAA 874
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ------------------------------------------------------------
consensus_9454#2 GGCGT------------------------------------------------------- 661
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 ATATTTGTTTACTCCATATTTCACACACATACACATTTTGAACGTCCTGGCTCCCTCTCC 898
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 TATACTCGTTATGCGGCATGGTGAATGATGTTGCTTAGAGTGAGCATACGGGCTTACTCT 934
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ------------------------------------------------------------
consensus_9454#2 ------------------------------------------------------------
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 TATACACTTGCCGTTTCCTCTCAAATCCTTTAAGTGTAGAGTAAGACATTAAAGCAGGCT 958
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 GACACCATCGGACGCGTGGGCGG------------------------------------- 957
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ------------------------------------------------------------
consensus_9454#2 ------------------------------------------------------------
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 AGAGAATGATGGTGGCGCGCACGTGCGTCTTCTTTGCCCGCACGTGCTCTGCGCCATCAT 1018
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 ------------------------------------------------------------
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ------------------------------------------------------------
consensus_9454#2 ------------------------------------------------------------
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 CGTAGTAATCATCGCCATCATCACTTTCGGTTTGAGTATTTTCTCTCCCCCTTTCACACA 1078
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 ------------------------------------------------------------
consensus_9454#6 ------------------------------------------------------------
consensus_9454#7 ------------------------------------------------------------
consensus_9454#3 ------------------------------------------------------------
consensus_9454#2 ------------------------------------------------------------
consensus_9454#5 ------------------------------------------------------------
consensus_9454#0 AATATTGTTTTATTCGCGGTGCAGCAATAGTGCGCAGCCCTGCAGCGAACAGCTTTCCGC 1138
consensus_9454#4 ------------------------------------------------------------
consensus_9454#1 -----------------------------------------
consensus_9454#6 -----------------------------------------
consensus_9454#7 -----------------------------------------
consensus_9454#3 -----------------------------------------
consensus_9454#2 -----------------------------------------
consensus_9454#5 -----------------------------------------
consensus_9454#0 CCTCCTAAGGGATGTTGGCCCAGCCGCGCGCGCTCGCAAGG 1179
consensus_9454#4 -----------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||