These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9454#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1179 fasta sequence [CCGCCCACGCGTCCGCACGCAAACGATGAGATCAGCACCCAGGACAGGAAATAACCAACAAGATGATGGAGCAAGAAACGTGTGTGTGTGTGTATGTGTAAAATGCAAAATGCAAACGAAAGTGGTGTTTTTGAATAGGATTTAAACACACACACACACCCTCAACCCAACGAGAGAGCCCTCAACGACCGCGTGCAGAACTGCCCCCCAGCCACCCCCTACACCACCACCATCATCCCAGAACCAAACAACCCCCAAACAAGAAATGGACTACAAAAACACATGTGGCTGCACGCGTGAGTGTTCTCTTGTTTTCATTACTTTTATTAAGTAATCTGTATTAGCTGGTAAGCAGACTATAAGAATTTTACAATAGACTACCCGCGGAAACTTACTGAGGAAAATTTGAACTATGAATAGTTTTACACATACAAAAACGTATATCGACATCGATCGAACAGAGGAGAGGACATACAAACAATTGCATTGCAAAATGAAAGAGAGAGCAAATACCTTCTTGATGAAGGTAAGAGAAGAGTATTCGACGACATAAACACGCAGTAGGACGCGCGGATCAGAGAAGGCCAAGGGGGCCTACCTTTCAACGACACAGCAAAGTTGTGAGTGGCGACAGTGCATACGAGTGAACCACAAAAAGTATTTGATAAAATTTCACCCCTCCCCGTTTTACCACACTCCTGTGGGTGTATGTGTGTGTGCGCGAGTGATACGTTAAATCTCGAAACGTTCTTGTATATTTTCTCCAACGTAATCAACTTTCTTTTGCTTTGCTGCAATAGTCAAGCGACGAAAGCTAGCTATCGTCAATCGTGGACGTATATTTGTTTACTCCATATTTCACACACATACACATTTTGAACGTCCTGGCTCCCTCTCCTATACACTTGCCGTTTCCTCTCAAATCCTTTAAGTGTAGAGTAAGACATTAAAGCAGGCTAGAGAATGATGGTGGCGCGCACGTGCGTCTTCTTTGCCCGCACGTGCTCTGCGCCATCATCGTAGTAATCATCGCCATCATCACTTTCGGTTTGAGTATTTTCTCTCCCCCTTTCACACAAATATTGTTTTATTCGCGGTGCAGCAATAGTGCGCAGCCCTGCAGCGAACAGCTTTCCGCCCTCCTAAGGGATGTTGGCCCAGCCGCGCGCGCTCGCAAGG] [+] EMBL BM627245 [CCGCCCACGCGTCCGCACGCAAACGATGAGATCAGCACCCAGGACAGGAAATAACCAACAAGATGATGGAGCAAGAAACGTGTGTGTGTGTGTATGTGTAAAATGCAAAATGCAAACGAAAGTGGTGTTTTTGAATAGGATTTAAACACACACACACACCCTCAACCCAACGAGAGAGCCCTCAACGACCGCGTGCAGAACTGCCCCCCAGCCACCCCCTACACCACCACCATCATCCCAGAACCAAACAACCCCCAAACAAGAAATGGACTACAAAAACACATGTGGCTGCACGCGTGAGTGTTCTCTTGTTTTCATTACTTTTATTAAGTAATCTGTATTAGCTGGTAAGCAGACTATAAGAATTTTACAATAGACTACCCGCGGAAACTTACTGAGGAAAATTTGAACTATGAATAGTTTTACACATACAAAAACGTATATCGACATCGATCGAACAGAGGAGAGGACATACAAACAATTGCATTGCAAAATGAAAGAGAGAGCAAATACCTTCTTGATGAAGGTAAGAGAAGAGTATTCGACGACATAAACACGCAGTAGGACGCGCGGATCAGAGAAGGCCAAGGGGGCCTACCTTTCAACGACACAGCAAAGTTGTGAGTGGCGACAGTGCATACGAGTGAACCACAAAAAGTATTTGATAAAATTTCACCCC ] [+] EMBL BM613628 [ ccgGAGAGAGCAAATACCTTCTTGATGAAGGTAAGAGAAGAGTATTCGACGACATAAACACGCAGTAGGACGCGCGGATCAGAGAAGGCCAAGGGGGCCTACCTTTCAACGACACAGCAAAGTTGTGAGTGGCGACAGTGCATACGAGTGAACCACAAAAAGTATTTGATAAAATTTCACCCCTCCCCGTTTTACCACACTCCTGTGGGTGTATGTGTGTGTGCGCGAGTGATACGTTAAATCTCGAAACGTTCTTGTATATTTTCTCCAACGTAATCAACTTTCTTTTGCTTTGCTGCAATAGTCAAGCGACGAAAGCTAGCTATCGTCAATCGTGGACGTATATTTGTTTACTCCATATTTCACACACATACACATTTTGAACGTCCTGGCTCCCTCTCCTATACACTTGCCGTTTCCTCTCAAATCCTTTAAGTGTAGAGTAAGACATTAAAGCAGGCTAGAGAATGATGGTGGCGCGCACGTGCGTCTTCTTTGCCCGCACGTGCTCTGCGCCATCATCGTAGTAATCATCGCCATCATCACTTTCGGTTTGAGTATTTTCTCTCCCCCTTTCACACAAATATTGTTTTATTCGCGGTGCAGCAATAGTGCGCAGCCCTGCAGCGAACAGCTTTCCGCCCTCCTAAGGGATGTTGGCCCAGCCGCGCGCGCTCGCAAGG] consensusID : consensus_9454#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 957 fasta sequence [CACAGATTACGTGTACGATTTATTTGCCAAAAAACTCCAATCCAATCAACGGTTCGATACAAAACTGATCAATCGACAAACAACAAACGCTCCACTGCGCATGGGAATGAAACCTACGGCAGCAATACCGCGTTGATGCAACCGTCGTTCTCCGGGTTGTTCGTCACCTGGGCGTACTTTCCCCACACCACCTTGCCGGACTGTGTGACGAGACCGAGCTCGGAAATGTTCACCTCAATCACCGTACCCTTGGTGATGACGCCCAAGCTCGTGTACATCGGCGAGGAGGGATTCTTCTTCACGCCAATAATCGGCAGATGGAAGGTGGCCTTCAGCTCCGGGTGCGTCACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTAAAGTTCTCGCCGACGTACGTCACCTTCGTGACCATACGCTTCCAGGCCTTGCGCTTCGTCTTGCCGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTGGGCGCGCACCTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTTGATCATGTTCGACAGCACCTTGGCGTTCGATTGGATGCCACGATCCATCAGGTACGGGGGCAGCGCACCGTCCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGCCTGGATCTTGCGCTTCATTTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGCTTCGCCTTCATGCCCCGCAGCTTGCGGGCCATGGCGGCGCGCTTCTTCGGCTCGCGAGCCTCCCGCTTACGCTTGCGCTCCTCATAATCGAGCCGGCGACCGTACAGCTTAATGTGCCGCTCAATATACTCGTTATGCGGCATGGTGAATGATGTTGCTTAGAGTGAGCATACGGGCTTACTCTGACACCATCGGACGCGTGGGCGG] [+] EMBL CNS09EPK [CACAGATTACGTGTACGATTTATTTGCCAAAAAACTCCAATCCAATCAACGGTTCGATACAAAACTGATCAATCGACAAACAACAAACGCTCCACTGCGCATGGGAATGAAACCTACGGCAGCAATACCGCGTTGATGCAACCGTCGTTCTCCGGGTTGTTCGTCACCTGGGCGTACTTTCCCCACACCACCTTGCCGGACTGTGTGACGAGACCGAGCTCGGAAATGTTCACCTCAATCACCGTACCCTTGGTGATGACGCCCAAGCTCGTGTACATCGGCGAGGAGGGATTCTTCTTCACGCCAATAATCGGCAGAAGGAAGGTGGCCTTCAGCTCCGGGTGCGTCACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTAAAGTTCTCGCCGACGTACGTAACCTTCGTGACCATACGCTTCCAGGCCTTGCGCTTCGTCTTGCCGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTGGGCGCGCACCTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTTGATCATGTTCGAAAGCACCTTGGCGTTCGATTGGATGCCACGATCCATCAGGTACGGGGGCAGCGCACCGTCCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGCCTGGATCTTGCGCTTCATTTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGCTTCGCCTTCATGCCCCGCAGCTTGCGGGCCATGGCGGCGCGCTTCTTCGGCTCGCGAGCCTCCCGCTTACGCTTGCGCTCCTCAAAATCGAGCCGGCGACCGTACAGCTTAAT ] [+] EMBL CNS09GHC [ gcTTTATTTGCCAAATAACTCCAATCCAATCAACGGTTCGATACAAAACTGATCAATCGACAAACAACAAACGCTCCACTGCGCATGGGAATGAAACCTACGGCAGCAATACCGCGTTGATGCAACCGTCGTTCTCCGGGTTGTTCGTCACCTGGGCGTACTTTCCCCACACCACCTTGCCGGACTGTGTGACGAGACCGAGCTCGGAAATGTTCACCTCAATCACCGTACCCTTGGTGATGACGCCCAAGCTCGTGTACATCGGCGAGGAGGGATTCTTCTTCACGCCAATTATCGGCAGATGGAAGGTGGCCTTCAGCTCCGGGTGCGTCACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTAAAGTTCTCGCCGACGTACGTGACCTTCGTGACCATACGCTTCCAGG CTTGCGCTTCGTCTTGCCGCTCCGGATCACCTTAAACACC ] [-] EMBL CNS09EPJ [ AAACTGATCAATCGACAAACAACAAACGCTCCACTGCGCATGGGAATGAAACCTACGGCAGCAATACCGCGTTGATGCAACCGTCGTTCTCCGGGTTGTTCGTCACCTGGGCGTACTTTCCCCACACCACCTTGCCGGACTGTGTGACGAGACCGAGCTCGGAAATGTTCACCTCAATCACCGTACCCTTGGTGATGACGCCCAAGCTCGTGTACATCGGCGAGGAGGGATTCTTCTTCACGCCAATGATCGGCAGATGGAAGGTGGCCTTCAGCTCCGGGTGCGTCACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTAAAGTTCTCGCCGACGTACGTCACCTTCGTGACCATACGCTTCCAGGCCTTGCGCTTCGTCTTGCCGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTGGGCGCGCA CTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTTGATCATGTTCGACAGCACCTTGGCGTTCGATTGGATGCCACGATCCATCAGGTACGGGGGCAGCGCACCGTCCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGCCTGGATCTTGCGCTTCATTTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGTTGCGCCTTCATGCCCCGCAGCTTGCGGGCCATGGCGGCGCGCTTCTTCGGCTCGCGAGCCTCtgc ] [-] EMBL BM611754 [ TCACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTAAAGTTCTCGCCGACGTACGTCACCTTCGTGACCATACGCTTCCAGGCCTTGCGCTTCGTCTTGCCGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTGTGCGCGCACCTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTTGATCATGTTCGACAGCACCTTGGCGTTCGATTGGATGCCACGATCCATCAGGTACGGGGGCAGCGCACCGTCCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGCCTGGATCTTGCGCTTCATTTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGCTTCGCCTTCATGCCCCGCAGCTTGCGGGCCATGGCGGCGCGCTTCTTCGGCTCGCGAGCCTCCCGCTTACGCTTGCGCTCCTCATAATCGAGCCGGCGACCGTACAGCTTAATGTGCCGCTCAATATACTCGTTATGCGGCATGGTGAATGATGTTGCTTAGAGTGAGCATACGGGCTTACTCTGACACCATCGGACGCGTGGGCGG] [-] EMBL BM598704 [ CATCGGTCGGATGAAGCGTTCGTACTTGGGCGGTTTGCGGGTGAAGTTCTCGCCGACGTACGTCACCTTCGTGACCATACGCTTCCAGGCCTTGCGCTTGGTCTTGCCGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTGGGCGCGCACCTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTTGATCATGTTCGACAGCACCTTGGCGTTCGATTGGATGCCACGATCCATCAGGTACGGGGGCAGCGCACCGTCCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGCCTGGATCTTGCGCTTCATTTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGCTTCGCCTTCATGCCCCTCAGCTTGCGGGCCATGGCGGCACGCTTCTTCGGCTCGCGAGCCTCCCGCTTACGCTTGCGCTCCTCATAATCGAGCCGGCGACCGTACAGCTTAATGTGCCGCTCAATATACTCGTTCTGCGGCATGGTGAATGATGTTGCTTAGAGTGAGCGTACGGGCTTACTCTGAC CGGACGCGTGGGCGG] consensusID : consensus_9454#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 661 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG---CTTTTAGCTGTGTAGCTGAAGTAGTTCGTGTAACAACGATTTTCTTCAGCTTAAATATATTGTTTAAAGCTAAACCAAAACAACATCTACCGTTTTCCCAATATTAGCAATGGCTGCGTTTGTGGAACCTCACTTCGATGCCTGGACGCAGAGCGGTGGCAACATGTCCGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAACGGTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTTGACCGTTACAACGTCATCGTGAA-GGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGGGGCGT] [+] EMBL BM583885 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG CTTTTAGCTGTGTAGCTGAAGTAGTTCGTGTAACAACGATTTTCTTCAGCTTAAATATATTGTTTAAAGCTAAACCAAAACAACATCTACCGTTTTCCCAATATTAGCAATGGCTGCGTTTGTGGAACCTCACTTCGATGCCTGGACGCAGAGCGGTGGCAACATGTCCGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAACGGTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTTGACCGTTACAACGTCATCGTGAA GGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGGGGCGT] [+] EMBL BM633871 [ CCGCCCACGCGTCCGATTCTTTTAGCTGTGTAGCTGAAGTAGTTCGTGTAACAACGATTTTCTTCAGCTTAAATATATTGTTTAAAGCTAAACCAAAACAACATCTACCGTTTTCCCAATATTAGCAATGGCTGCGTTTGTGGAACCTCACTTCGATGCCTGGACGCAGAGCGGTGGCAACATGTCGGTGGTGGATAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAATCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAACGGTTGCGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCGTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGGCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTTGACCGTTACAACGTCATCGTGAAGGGGTCTCGCGGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCT ] [+] EMBL BM643789 [ CCGCGGACGCGTGGG CTTTTAGCTGTGTAGCTGAAGTAGTTCGTGTAACAACGATTTTCTTCAGCTTAAATATATTGTTTAAAGCTAAACCAAAACAACATCTACCGTTTTCCCAATATTAGCAATGGCTGCGTTTGTGGAACCTCACTTCGATGCCTGGACGCAGAGCGGTGGCAACATGTCCGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGCATCCCCACTGGAACCAGTTCCCGCCCATGAACCCGCTGTGGCACTCGATCCTAGGTTTTGCCATCTTCATGCTCGGAATGATCTCGATGACCGGTAACGGTTGTGTGATGTACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTGGCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGATGGTGATCAACTGCTGGCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCATGCTGGGATCGCTGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTTGACCGTTACAACGTCATCGTGAA GGGTCTCGCCGGCAAGCCGA ] consensusID : consensus_9454#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 631 fasta sequence [CCGTTTTCTTCTTCTTTTCTTATCGATCACTAACTAACCATGCAAATGTATTAAAATCGTGCAAAATCGTACTTCGATCCTTCAACGTTACACATACACACTTTGCGTTTCGCGCTACCATTCACCTCTAAAACTTAACAATTCAATGATGATACGTACCTTCAAAATCCCAATTTCTGTGCATCATCGGCATCCGTACGTTCCTGCGCTAACATTCGCTGCACCCTTTCCCCTGTGCCCGGTACCTGTGCGTGTATGTGTGTGTATGTGTACGATCGTGCTAAAAAACACACTGCCCCATGCTCCAAAAACCAATCAACATTTTGTGCCCGATGACCTGCTCATCATCATTCGGCTTGGAATATGCGATCATAATATACACACCACCATCCAATGTCAAACGAACACATCGCTCACATGCACTAATCCACCACCCCTTAACCACACACTACGATGTCCTTGTACTATACTTTGTGTGCGTGTGTGCGTGTTCGTGTATGTGATGTACACAGGTACCCGCTATTTCACTTGCCTACGAGGAAGCCGAATCCGATATCATGAAACGCCAGCCCCGTAACCCGTTCACTGATAAATTGGTCAACGAAAGACTTATCTCGATGGCTTACGGTCA] [+] EMBL BM639124 [CCGTTTTCTTCTTCTTTTCTTATCGATCACTAACTAACCATGCAAATGTATTAAAATCGTGCAAAATCGTACTTCGATCCTTCAACGTTACACATACACACTTTGCGTTTCGCGCTACCATTCACCTCTAAAACTTAACAATTCAATGATGATACGTACCTTCAAAATCCCAATTTCTGTGCATCATCGGCATCCGTACGTTCCTGCGCTAACATTCGCTGCACCCTTTCCCCTGTGCCCGGTACCTGTGCGTGTATGTGTGTGTATGTGTACGATCGTGCTAAAAAACACACTGCCCCATGCTCCAAAAACCAATCAACATTTTGTGCCCGATGACCTGCTCATCATCATTCGGCTTGGAATATGCGATCATAATATACACACCACCATCCAATGTCAAACGAACACATCGCTCACATGCACTAATCCACCACCCCTTAACCACACACTACGATGTCCTTGTACTATACTTTGTGTGCGTGTGTGCGTGTTCGTGTATGTGATGTACACAGGTACCCGCTATTTCACTTGCCTACGAGGAAGCCGAATCCGATATCATGAAACGCCAGCCCCGTAACCCGTTCACTGATAAATTGGTCAACGAAAGACTTATCTCGATGGCTTACGGTCA] consensusID : consensus_9454#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 373 fasta sequence [CAAACACACACACACGCACACGTGGTGGTGATCACTTTGAAGAAGGCGAAGGAGTAATTAGAGTATATTTGAAAATGGTTCCTTTCTGTTTCTCTCAACCTAGTAGGCCCGCCACTGGCGCTCGTCTGTCTGTATCGTTTCTTACCTTTGTTGTATATTACTTCTGTCTCTTATTTATGTTTGATGTCTATGTAACACCATCTCTGCTTGATGGGACGAGGCGGCGAGAAAACGGTTAAATTAAATAGTAGATGTAGAATGAAGAGCGAAAAAAAAAACACAAGAACCACTGTCGCCGTTAATATAAACTGTACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTCGACGTACAACGTGCTGAAGC] [+] EMBL CNS09IDV [CAAACACACACACACGCACACGTGGTGGTGATCACTTTGAAGAAGGCGAAGGAGTAATTAGAGTATATTTGAAAATGGTTCCTTTCTGTTTCTCTCAACCTAGTAGGCCCGCCACTGGCGCTCGTCTGTCTGTATCGTTTCTTACCTTTGTTGTATATTACTTCTGTCTCTTATTTATGTTTGATGTCTATGTAACACCATCTCTGCTTGATGGGACGAGGCGGCGAGAAAACGGTTAAATTAAATAGTAGATGTAGAATGAAGAGCGAAAAAAAAAACACAAGAACCACTGTCGCCGTTAATATAAACTGTACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTTTCGACGTACAACGTGCTGAAGC] consensusID : consensus_9454#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 369 fasta sequence [AGGCAAGAATCGGCACGATGNAAAAAGCCCAAGTGTCGTCCCCCCAGTGTGTGTTCTCAGTGCTCAAAATGCGTGAATATAAAATCGTCGTGCTTGGTAGCGGAGGTGTCGGCAAATCGGCCCTGACAGTGCAGTTTGTCCAGGGCATATTTGTGGAAAAGTACGANCCAAGCGATAGAGGACAGCTACCGGAAACAGGTCGAGGTGGACGGTCAGCGAANTGCAGTGTTGGGAAAGTTTTGGACACGGGCCGGCGACAGAACAATTCACCGGCATGCGAGACCGTGTACATGANAAGAATGGGCAAGGAGTTCGTGCTAGTATATTCCATCAGCGTGCACAGTCGACCTTCAAACGATCTGCAGGACC] [+] EMBL BX468387 [AGGCAAGAATCGGCACGATGNAAAAAGCCCAAGTGTCGTCCCCCCAGTGTGTGTTCTCAGTGCTCAAAATGCGTGAATATAAAATCGTCGTGCTTGGTAGCGGAGGTGTCGGCAAATCGGCCCTGACAGTGCAGTTTGTCCAGGGCATATTTGTGGAAAAGTACGANCCAAGCGATAGAGGACAGCTACCGGAAACAGGTCGAGGTGGACGGTCAGCGAANTGCAGTGTTGGGAAAGTTTTGGACACGGGCCGGCGACAGAACAATTCACCGGCATGCGAGACCGTGTACATGANAAGAATGGGCAAGGAGTTCGTGCTAGTATATTCCATCAGCGTGCACAGTCGACCTTCAAACGATCTGCAGGACC] [+] EMBL CNS08ORQ [ TAGCGGAGGTGTCGGCAAATCGGCCCTGACAGTTCAGTTTGTCCAGGGCATATTTGTGGAAAAGTACGACCCAA CGATAGAGGAC ] consensusID : consensus_9454#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 146 fasta sequence [TTCTTCCGCTTTCATCAGCATCAGCCTTTGCCTTCGCCTTTGCCGGCGCCTTGGTGGCCGTGGTTGCCTTTTTCGCCTTGGCTGCCGCCCTGGCTGCGTCTTTTGCTTCCTTCCGGGCGGCCTTGGCGGCCACGTCCCATTCCTTG] [+] EMBL CNS09OMC [TTCTTCCGCTTTCATCAGCATCAGCCTTTGCCTTCGCCTTTGCCGGCGCCTTGGTGGCCGTGGTTGCCTTTTTCGCCTTGGCTGCCGCCCTGGCTGCGTCTTTTGCTTCCTTCCGGGCGGCCTTGGCGGCCACGTCCCATTCCTTG] [+] EMBL CNS09K1P [ TTTCCTTCGCCTTTGCCGGAGCCTTGGTGGCCGTGGTTGCCTTTTTCGCCTTGGCTGCCGCCCTGGCTGCGTCTTTCGCTTCCTTCCGGGCGGCCTTGGCGGCCCCGTCTCGTTCCTT ] consensusID : consensus_9454#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 137 fasta sequence [CGATTTTGTCCATCCGGTGGCGGAGGGAGGCATCCAATCAAATGGTAAACCAATCGAGGTGACCCCAAATGGCCATGGGAGCAACGACAGCAGCTTTAGTAGCACCAGCAACAACAACATCGTGCTGGACGGTAACC] [+] EMBL BM601405 [CGATTTTGTCCATCCGGTGGCGGAGGGAGGCATCCAATCAAATGGTAAACCAATCGAGGTGACCCCAAATGGCCATGGGAGCAACGACAGCAGCTTTAGTAGCACCAGCAACAACAACATCGTGCTGGACGGTAACC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9454#1 -------------CACAGATTACGTGTACGATTTATTTGCCAAAAAACTCCAATCCAATC 47 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ------------------------------------------------------------ consensus_9454#2 ------------------------------------------------------------ consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 CCGCCCACGCGTCCGCACGCAAACGATGAGATCAGCACCCAGGACAGGAAATAACCAACA 60 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 AACGGTTCGATACAAAACTGATCAATCGACAAACAACAAACGCTCCACTGCGCATGGGAA 107 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ------------------------------------------------------------ consensus_9454#2 ------------------------------------------------------------ consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 AGATGATGGAGCAAGAAACGTGTGTGTGTGTGTATGTGTAAAATGCAAAATGCAAACGAA 120 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 TGAAACCTACGGCAGCAATACCGCGTTGATGCAACCGTCGTTCTCCGGGTTGTTCGTCAC 167 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ---------------------------CCGTTTTCTTCTTCTTTTCTTATCGATCACTAA 33 consensus_9454#2 ----------------------------------------------------CCGCCCAC 8 consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 AGTGGTGTTTTTGAATAGGATTTAAACACACACACACACCCTCAACCCAACGAGAGAGCC 180 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 CTGGGCGTACTTTCCCCACACCACCTTGCCGGACTGTGTGACGAGACCGAGCTCGGAAAT 227 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 CTAACCATGCAAATGTATTAAAATCGTGCAAAATCGTACTTCGATCCTTCAACGTTACAC 93 consensus_9454#2 GCGTCCGCCCACGCGTCCGCCCACGCGTCCGCTTTTAGCTGTGTAGCTGAAGTAGTTCGT 68 consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 CTCAACGACCGCGTGCAGAACTGCCCCCCAGCCACCCCCTACACCACCACCATCATCCCA 240 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 GTTCACCTCAATCACCGTACCCTTGGTGATGACGCCCAAGCTCGTGTACATCGGCGAGGA 287 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ATACACACTTTGCGTTTCGCGCTACCATTCACCTCTAAAACTTAACAATTCAATGATGAT 153 consensus_9454#2 GTAACAACGATTTTCTTCAGCTTAAATATATTGTTTAAAGCTAAACCAAAACAACATCTA 128 consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 GAACCAAACAACCCCCAAACAAGAAATGGACTACAAAAACACATGTGGCTGCACGCGTGA 300 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 GGGATTCTTCTTCACGCCAATAATCGGCAGATGGAAGGTGGCCTTCAGCTCCGGGTGCGT 347 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ACGTACCTTCAAAATCCCAATTTCTGTGCATCATCGGCATCCGTACGTTCCTGCGCTAAC 213 consensus_9454#2 CCGTTTTCCCAATATTAGCAATGGCTGCGTTTGTGGAACCTCACTTCGATGCCTGGACGC 188 consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 GTGTTCTCTTGTTTTCATTACTTTTATTAAGTAATCTGTATTAGCTGGTAAGCAGACTAT 360 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 CACGTGCGCCTTGTTCATACGCAGCGCCATCGGTCGGATGAAGCGTTCGTACTTGGGCGG 407 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ATTCGCTGCACCCTTTCCCCTGTGCCCGGTACCTGTGCGTGTATGTGTGTGTATGTGTAC 273 consensus_9454#2 AGAGCGGTGGCAACATGTCCGTGGTGGACAAGGTCCCACCAGAGATGCTCCACATGGTGC 248 consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 AAGAATTTTACAATAGACTACCCGCGGAAACTTACTGAGGAAAATTTGAACTATGAATAG 420 consensus_9454#4 -----------------------------------------------------------C 1 consensus_9454#1 TTTGCGGGTAAAGTTCTCGCCGACGTACGTCAC--------CTTCGTGACCATACGCTTC 459 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 GATCGTGCTAAAAAACACACTGCCCCATGCTCC--------AAAAACCAATCAACATTTT 325 consensus_9454#2 ATCCCCACTGGAACCAGTTCCCGCCCATGAACC--------CGCTGTGGCACTCGATCCT 300 consensus_9454#5 --AGGCAAGAATCGGCACGATGNAAAAAGCCCA--------AGTGTCGTCCCCCCAGTGT 50 consensus_9454#0 TTTTACACATACAAAAACGTATATCGACATCGATCGAACAGAGGAGAGGACATACAAACA 480 consensus_9454#4 AAACACACACACACGCACACGTGGTGGTGATCA-----CTTTGAAGAAGGCGAAGGAGTA 56 consensus_9454#1 CAGGCCTTGCGCTTCGTCTTGC-CGCTCCGGATCACCTTAAACACCTCGGCATCGGCCTG 518 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 GTGCCCGATGACCTGCTCATCA-TCATTCGG-----CTTGGAATATGCGATCATAATATA 379 consensus_9454#2 AGGTTTTGCCATCTTCATGCTC-GGAATGATCTCG-ATGACCGGTAACGGTTGTGTGATG 358 consensus_9454#5 GTGTTCTCAGTGCTCAAAATGCGTGAATATAAAATCGTCGTGCTTGGTAGCGGAGGTGTC 110 consensus_9454#0 ATTGCATTGCAAAATGAAAGAGAGAGCAAATACCTTCTTGATGAAGGTAAGAGAAGAGTA 540 consensus_9454#4 ATTAGAGTATATTTGAAAATGGTTCCTTTCTGTTTCTCTCAACCTAGTAGGCCCGCCACT 116 consensus_9454#1 GGCGCGCACCTTCGGTATCGGCACGTCCCATTTGCCCGCCTTCTCCTTGCGCTTCTGCTT 578 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 CACACCACCATCCAATGTCAAACGAACACATCGCTCACATGCACTAATCCACCACCCCTT 439 consensus_9454#2 TACATCTTCACCAACACCAAGTCACTCCGAACCCCCTCCAACTTGCTGGTGGTCAATCTG 418 consensus_9454#5 GGCAAATCGGCCCTGACAGTGCAGTTTGTCCAGGGCATATTTGTGGAAAAGTACGANCCA 170 consensus_9454#0 TTCGACGACATAAACACGCAGTAGGACGCGCGGATCAGAGAAGGCCAAGGGGGCCTACCT 600 consensus_9454#4 GGCGCTCGTCTGTCTGTATCGTTTCTTACCTTTGTTGTATATTACTTCTGTCTCTTATTT 176 consensus_9454#1 GATCATGTTCGACAGCACCTTGGCGTTCGATTGGATGCCACGA-TCCATCAGGTACGGGG 637 consensus_9454#6 ------------------------------------------T-TCTTCCGCTTTCATCA 17 consensus_9454#7 ----------------------------------------CGA-TTTTGTCCATCCGGTG 19 consensus_9454#3 AACCACACACTACGATGTCCTTGTACTATACTTTGTGT-GCGT-GTGTGCGTGTTCGTGT 497 consensus_9454#2 GCCTTCTCCGATTTCTTCATGATGTTCACGATGGGCCCGCCGA-TGGTGATCAACTGCTG 477 consensus_9454#5 AGCGATAGAGGACAGC-TACCGGAAACAGGTCGAGGTGGACGG-TCAGCGAANTGCAGTG 228 consensus_9454#0 TTCAACGACACAGCAAAGTTGTGAGTGGCGACAGTGCATACGAGTGAACCACAAAAAGTA 660 consensus_9454#4 ATGTTTGATGTCTATGTAACACCATCTCTGCTTGATGGGACGAGGCGGCGAGAAAACGGT 236 consensus_9454#1 GCAGCGCACCGT--CCTCCACCTTTTCGGTCGTCTTCTTCACCTTCTTCTCCTCGTGCGC 695 consensus_9454#6 GCATCAGCCTTTG-CCTTCGCCTTTGCCGGCGCCTTGGTGGCCGTGGTTGCCTTTTTCGC 76 consensus_9454#7 GCGGAGGGAGG-------CATCCAATCAAATGGTAAACCAATCGAGGTGACCCCAAATGG 72 consensus_9454#3 ATGTGATGTACA--CAGGTACCCGCTATTTCACTTGCCTA--CGAGGAAGCCGAATCCGA 553 consensus_9454#2 GCACGAGACCTGGACCTTTGGCCCGTTCGCGTGCGAGCTGTACGCCAT-GCTGGGATCGC 536 consensus_9454#5 TTGGGAAAGTTTTGGACACGGGCCGGCGACAGAACAATTCACCGGCAT--GCGAGACCGT 286 consensus_9454#0 TTTGATAAAATTTCACCCCTCCCCGTTTTACCACACTCCTGTGGGTGTATGTGTGTGTGC 720 consensus_9454#4 TAAATTAAATAGTAGATGTAGAATGAAGAGCGAAAAAAAAAACACAAGAACCACTGTCGC 296 * consensus_9454#1 CTGGATCTTGCGCTTCAT-TTGGATCTTCTCGTTGCGGCGCTGCTTCTGGAACAGCTTCG 754 consensus_9454#6 CTTGG-CTGCCGCCCTGG-CTGCGTCTT----TTGC----TTCCTTCCGGGCGGCCTTGG 126 consensus_9454#7 CCATG---GGAGCAACGA-CAGCAGCTT----TAGT-----AGCACCAGCAACAACAACA 119 consensus_9454#3 TATCATGAAACGCCAGCC-CCGTAACCCGTTCACTGATAAATTGGTCAACGAAAGACTTA 612 consensus_9454#2 TGTTCGGCTGTGCCTCGATCTGGACCATGACGATGATTGCCTTTGACCGTTACAACGTCA 596 consensus_9454#5 GTACATGANAAGAATGGGCAAGGAGTTCGTGCTAGTATA-TTCCATCAGCGTGCACAGTC 345 consensus_9454#0 GCGAGTGATACGTTAAATCTCGAAACGT--TCTTGTATATTTTCTCCAACGTAATCAACT 778 consensus_9454#4 CGTTA-------ATATAAACTGTACTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACT 349 * consensus_9454#1 CCTTCATGCCCCGCAGCTTGCGGGCCATGGCGGCGCGCTTCTTCGGCTCGCGAGCCTCCC 814 consensus_9454#6 CGGCCACGTCCCATTCCTTG---------------------------------------- 146 consensus_9454#7 TCGTGCTGGACGGTAACC------------------------------------------ 137 consensus_9454#3 TCTCGATGGCTTACGGTCA----------------------------------------- 631 consensus_9454#2 TCGTGAAGGGTCTCGCCGGCAAGCCGATGACCAACAACGGTGCCCTGCTGCGCATTCTGG 656 consensus_9454#5 GACCTTCAAACGATCTGCAGGACC------------------------------------ 369 consensus_9454#0 TTCTTTTGCTTTGCTGCAATAGTCAAGCGACGAAAGCTAGCTATCGTCAATCGTGGACGT 838 consensus_9454#4 TTTCGACGTACAACGTGCTGAAGC------------------------------------ 373 consensus_9454#1 GCTTACGCTTGCGCTCCTCATAATCGAGCCGGCGACCGTACAGCTTAATGTGCCGCTCAA 874 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ------------------------------------------------------------ consensus_9454#2 GGCGT------------------------------------------------------- 661 consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 ATATTTGTTTACTCCATATTTCACACACATACACATTTTGAACGTCCTGGCTCCCTCTCC 898 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 TATACTCGTTATGCGGCATGGTGAATGATGTTGCTTAGAGTGAGCATACGGGCTTACTCT 934 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ------------------------------------------------------------ consensus_9454#2 ------------------------------------------------------------ consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 TATACACTTGCCGTTTCCTCTCAAATCCTTTAAGTGTAGAGTAAGACATTAAAGCAGGCT 958 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 GACACCATCGGACGCGTGGGCGG------------------------------------- 957 consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ------------------------------------------------------------ consensus_9454#2 ------------------------------------------------------------ consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 AGAGAATGATGGTGGCGCGCACGTGCGTCTTCTTTGCCCGCACGTGCTCTGCGCCATCAT 1018 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 ------------------------------------------------------------ consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ------------------------------------------------------------ consensus_9454#2 ------------------------------------------------------------ consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 CGTAGTAATCATCGCCATCATCACTTTCGGTTTGAGTATTTTCTCTCCCCCTTTCACACA 1078 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 ------------------------------------------------------------ consensus_9454#6 ------------------------------------------------------------ consensus_9454#7 ------------------------------------------------------------ consensus_9454#3 ------------------------------------------------------------ consensus_9454#2 ------------------------------------------------------------ consensus_9454#5 ------------------------------------------------------------ consensus_9454#0 AATATTGTTTTATTCGCGGTGCAGCAATAGTGCGCAGCCCTGCAGCGAACAGCTTTCCGC 1138 consensus_9454#4 ------------------------------------------------------------ consensus_9454#1 ----------------------------------------- consensus_9454#6 ----------------------------------------- consensus_9454#7 ----------------------------------------- consensus_9454#3 ----------------------------------------- consensus_9454#2 ----------------------------------------- consensus_9454#5 ----------------------------------------- consensus_9454#0 CCTCCTAAGGGATGTTGGCCCAGCCGCGCGCGCTCGCAAGG 1179 consensus_9454#4 ----------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||