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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9469#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 994 fasta sequence
[CTGTTGGCCTATTGGAATTCATTTCTTGTTTGTCATTCTGTCGGTTTCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT-TTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA-GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT-GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG-AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGG-ACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCTTCCGCCGCCTAGG-GT-AATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAATAAAGCCGATCAATGTAAAACTTAACAAACGTGATCTTCTTTTCTCATTTCTCGAGGTAAGCAAAATATTCAATAAATGTTCCTTTCGACGAGGACGCTTACGGCTCTAAAATGGGCCAAGTCACTCCTTATCACTAAATTCTTTCAATAAAACACCATTAAAATCAGTAAAAAAAAAAAA]
[-] EMBL CNS09JUU [CTGTTGGCCTATTGGAATTCATTTCTTGTTTGTCATTCTGTCGGTTTCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGAACTGAACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTAACGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTACGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATTTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGG ACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGGCGT AATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAATAAAGCCGATCAATGTAAAACTTAACAAACGTGATCTTCTTTTCTCATTTCTCGAGGTAAGCAAAATATTCAATAAATGTTCCTTTCGACGAGGACGCTTACGGCTCTAAAATGGGCCAAGTCACTCCTTATCACTAAATTC ]
[+] EMBL BM644612 [ TTTGTCATTCTGTCGGTTTCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGCGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATG ]
[+] EMBL CNS092AK [ cctactggATTCTGTCGGTTTCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACTNTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTACGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATTTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGA ]
[+] EMBL CNS09JUT [ TCTGTCGGTTTCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAA CGGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTACGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATTTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAA GGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGG ACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGG GTAAATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAATAAAGCCGATCAATGTAAAACTTAACAAACGTGATCTTCTTTTCTCATTTCTCGAGGTAAGCAAAATATTCAATAAATGTTCCTTTCGACGAGGACGCTTACGGCTCTAAAATGGGCCAAGTCACTCCTTATCACTAAATTCTTTCAATAAAACACCATTAAAATCAGTAAAAAAAAAAAA]
[+] EMBL BM629738 [ ccgCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCATGGGCGTGACGGA ]
[+] EMBL BM582743 [ ccgCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAAGGAGGCGTACGAAATTTTCCGCATGGGCGTGACGGAGATCCACAAGCGTTTGATCCTGAATCTGCCCAACTTTAAGGTGGCCGTGATAGATAAGG ACGGGGTGAAGTATCTGGACGACATTACGCCAGATTCGCTGAAGCAG ]
[+] EMBL BM581826 [ ccGCATCCTCGGAACGCAAATTTGTTGTAAACTTACT TTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTATATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCTGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGG ACGGGGTGAAGTATCTGGACGACATTACGCCGGACACGCTGAAGCAGGCTTCCGCCGCCTAGG CG AATGTAACG ]
[+] EMBL BX628496 [ CTCGGAACGCGAATTTGTTGTAAACTTACT TTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCNTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGNGCTAAAGGATGATGAGGACAAGATCCTGAAGGNATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCACGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGNGCAACGGGTACGAACTGGGCCCNAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCG ]
[+] EMBL BM598083 [ ccgGTAAACTTACT TTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTATATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGGAACGGGGTGAAGTATCTGGACGACATTACGCCGGACACGCTGAAGCAGGCTTCCGCCGCCTAGG CG AATGTAACGTAGAATCTAGCGTCTTGC ]
[+] EMBL BM616919 [ ccgCTTACT TTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCA GTTCACCGAGTATATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGAT GAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAG AAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGG ACGGGGTGAAGTATCTGGACGACATTACGCCGGACACGCTGAAGCAGGCTTCCGCCGCCTAGGcgaa ]
consensusID : consensus_9469#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 818 fasta sequence
[GATCCCCGAGGTTGGCATCCTCGGAACGCGAATTTGTTGTAACTTACTTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTAGCCGTGATAGATAAGGACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGGCGTAATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAATAAAGCCGATCAATGAAAACTTAAAAAAAAAAAAAAAAAAGGC]
[+] EMBL AL931713 [GATCCCCGAGGTTGGCATCCTCGGAACGCGAATTTGTTGTAACTTACTTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGA ]
[+] EMBL BX628771 [ gtaAACTTACTTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTAGCCGTGATAGATAAGGACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTANGCGTAATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAANGATTTTTTTGTCATGCGTTCGGAATAAAGCCGA ]
[+] EMBL BX608685 [ ACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTAGCCGTGATAGATAAGGACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGGCGTAATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGAT ]
[-] EMBL CNS092AL [ GCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTACGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATTTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGGACGGGGTGAAGTATCTGGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGGCGTAATGTAACGTAGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAATAAAGCCGATCAATGAAAACTTAAAAAAAAAAAAAAAAAAGGC]
[+] EMBL BX611517 [ GGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGCACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAACTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGCGCCCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGATCACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTTGATCCTGAATCTGCCCAACTTCAAGGTAGCCGTGATAGATAAGGACGGGGTGAAGTATCTGG ]
consensusID : consensus_9469#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 506 fasta sequence
[GGGANGCTCGAGGCAGAATCCCNACGAGGTTGAGAACGCGAATTTGTTGTAAACTTACTTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTNAAGGATGATGAGGACAAGATCCTTGAAGGTGTCGGACAATCTGATGCTCGCTACCATGGGCGAAAGCCGGCGACCGTGTGCAGTTTCACCGAGTACATTAGCAAAAAACATTCTCCGTCTANCGAAATGCGGCAACGGGTACGAGACTGGGCCCGAAAGCGGCGGGACACGTTCACCCGGCGGCAATCTGGGCCGACTATCTGCGCTCCCGGACGCCGTACCATGTGAATCTAGCTGGTCNAGGCGGGTATGATGAGGTGGATGGTCCGNAGCNTGCGANCTACATCGACTATCTGGACGCAACTCGCTGGACGGGTNAAGANATGGG]
[+] EMBL BX469595 [GGGANGCTCGAGGCAGAATCCCNACGAGGTTGAGAACGCGAATTTGTTGTAAACTTACTTTCCGCAACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTNAAGGATGATGAGGACAAGATCCTTGAAGGTGTCGGACAATCTGATGCTCGCTACCATGGGCGAAAGCCGGCGACCGTGTGCAGTTTCACCGAGTACATTAGCAAAAAACATTCTCCGTCTANCGAAATGCGGCAACGGGTACGAGACTGGGCCCGAAAGCGGCGGGACACGTTCACCCGGCGGCAATCTGGGCCGACTATCTGCGCTCCCGGACGCCGTACCATGTGAATCTAGCTGGTCNAGGCGGGTATGATGAGGTGGATGGTCCGNAGCNTGCGANCTACATCGACTATCTGGACGCAACTCGCTGGACGGGTNAAGANATGGG]
consensusID : consensus_9469#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 502 fasta sequence
[CCGCCCACGCGTCCGCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACTTTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGGCGCCCACGGGTACGGCGGCATG]
[+] EMBL BM608486 [CCGCCCACGCGTCCGCTTCGGCATCCTCGGAACGCGAATTTGTTGTAAACTTACTTTCCGCTACAATAATCGTACACATTTCGTCTCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACTGCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCTGAAGGTATCGGACAATCTGATGCTCGCTACCATGGGCGAAGCCGGCGACCGTGTGCAGTTCACCGAGTACATCAGCAAAAACATTCTCCTCTACCGAATGCGCAACGGGTACGAGCTGGGCCCGAAAGCGGCGGCACACTTCACCCGCCGCAATCTGGCCGACTATCTGCGCTCCCGCACGCCGTACCATGTGAATCTGCTGGTCGGCGGGTATGATGAGGTGGATGGGCCGCAGCTGCACTACATCGACTATCTGGCCAACTCGCTGCCGGTGAAGCATGGGCGCCCACGGGTACGGCGGCATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9469#0 CTGTTGGCCTATTGGAATTCATTTCTTGTTTGTCATTCTGTCGGTTTCTTCGGCATC--- 57
consensus_9469#1 ---------------------------------GATCCCCGAGGTT-----GGCATC--- 19
consensus_9469#3 --------------------------------CCGCCCACGCGTCCGCTTCGGCATC--- 25
consensus_9469#2 -------------------------------GGGANGCTCGAGGCAGAATCCCNACGAGG 29
* * *
consensus_9469#0 CTCGGAACGCGAATTTGTTGTAAACTTACTTTCCGCAACAATAATCGTACACATTTCGTC 117
consensus_9469#1 CTCGGAACGCGAATTTGTTGTAA-CTTACTTTCCGCAACAATAATCGTACACATTTCGTC 78
consensus_9469#3 CTCGGAACGCGAATTTGTTGTAAACTTACTTTCCGCTACAATAATCGTACACATTTCGTC 85
consensus_9469#2 TTGAGAACGCGAATTTGTTGTAAACTTACTTTCCGCAACAATAATCGTACACATTTCGTC 89
* ******************* ************ ***********************
consensus_9469#0 TCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACT 177
consensus_9469#1 TCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACT 138
consensus_9469#3 TCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACT 145
consensus_9469#2 TCACCATGGAAACTTTGATGGGAATTCGTGGCCCGGACTTTGTGATGCTGGCCGCGGACT 149
************************************************************
consensus_9469#0 GCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCT-GAAGGTA 236
consensus_9469#1 GCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCT-GAAGGTA 197
consensus_9469#3 GCACTCACGCCCATTCCATCATGGTGCTAAAGGATGATGAGGACAAGATCCT-GAAGGTA 204
consensus_9469#2 GCACTCACGCCCATTCCATCATGGTGCTNAAGGATGATGAGGACAAGATCCTTGAAGGTG 209
**************************** *********************** ******
consensus_9469#0 TCGGACAATCTGATGCTCGCTACCATGGGCGAA-GCCGGCGACCGTGTGCAGTT-CACCG 294
consensus_9469#1 TCGGACAATCTGATGCTCGCTACCATGGGCGAA-GCCGGCGACCGTGTGCAGTT-CACCG 255
consensus_9469#3 TCGGACAATCTGATGCTCGCTACCATGGGCGAA-GCCGGCGACCGTGTGCAGTT-CACCG 262
consensus_9469#2 TCGGACAATCTGATGCTCGCTACCATGGGCGAAAGCCGGCGACCGTGTGCAGTTTCACCG 269
********************************* ******************** *****
consensus_9469#0 AGTACATCAGCAAAAA-CATTCTCC-TCTACCGAA-TGCG-CAACGGGTACGAG-CTGGG 349
consensus_9469#1 AGTACATCAGCAAAAA-CATTCTCC-TCTACCGAA-TGCG-CAACGGGTACGAA-CTGGG 310
consensus_9469#3 AGTACATCAGCAAAAA-CATTCTCC-TCTACCGAA-TGCG-CAACGGGTACGAG-CTGGG 317
consensus_9469#2 AGTACATTAGCAAAAAACATTCTCCGTCTANCGAAATGCGGCAACGGGTACGAGACTGGG 329
******* ******** ******** **** **** **** ************ *****
consensus_9469#0 CCCGAAAGCGGCGGCACAC-TTCACCCGCCG-CAATCTGG-CCGACTATCTGCGCTCCCG 406
consensus_9469#1 CCCGAAAGCGGCGGCACAC-TTCACCCGCCG-CAATCTGG-CCGACTATCTGCGCTCCCG 367
consensus_9469#3 CCCGAAAGCGGCGGCACAC-TTCACCCGCCG-CAATCTGG-CCGACTATCTGCGCTCCCG 374
consensus_9469#2 CCCGAAAGCGGCGGGACACGTTCACCCGGCGGCAATCTGGGCCGACTATCTGCGCTCCCG 389
************** **** ******** ** ******** *******************
consensus_9469#0 CACGCCGTACCATGTGAATCT-GCTGGTCG--GCGGGTATGATGAGGTGGATGGGCCGCA 463
consensus_9469#1 CACGCCGTACCATGTGAATCT-GCTGGTCG--GCGGGTATGATGAGGTGGATGGGCCGCA 424
consensus_9469#3 CACGCCGTACCATGTGAATCT-GCTGGTCG--GCGGGTATGATGAGGTGGATGGGCCGCA 431
consensus_9469#2 GACGCCGTACCATGTGAATCTAGCTGGTCNAGGCGGGTATGATGAGGTGGATGGTCCGNA 449
******************** ******* ********************** *** *
consensus_9469#0 GCT---GCACTACATCGACTATCTGGCC--AACTCGCTG--CCGGTGAAG-CATGG-CGC 514
consensus_9469#1 GCT---GCACTACATCGACTATCTGGCC--AACTCGCTG--CCGGTGAAG-CATGG-CGC 475
consensus_9469#3 GCT---GCACTACATCGACTATCTGGCC--AACTCGCTG--CCGGTGAAG-CATGGGCGC 483
consensus_9469#2 GCNTGCGANCTACATCGACTATCTGGACGCAACTCGCTGGACGGGTNAAGANATGGG--- 506
** * ***************** * ********* * *** *** ****
consensus_9469#0 CCACGGGTACGGCGGCATGTTCGTAAACAGCATCTTCGACCGGTACCATCACGACAAGAT 574
consensus_9469#1 CCACGGGTACGGCGGCATGTTCGTGAACAGCATCTTCGACCGGTACCATCACGACAAGAT 535
consensus_9469#3 CCACGGGTACGGCGGCATG----------------------------------------- 502
consensus_9469#2 ------------------------------------------------------------
consensus_9469#0 CACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTT 634
consensus_9469#1 CACACAGAAGGAGGCGTACGAAATTTTCCGCAAGGGCGTGACGGAGATCCACAAGCGGTT 595
consensus_9469#3 ------------------------------------------------------------
consensus_9469#2 ------------------------------------------------------------
consensus_9469#0 GATCCTGAATCTGCCCAACTTCAAGGTGGCCGTGATAGATAAGGACGGGGTGAAGTATCT 694
consensus_9469#1 GATCCTGAATCTGCCCAACTTCAAGGTAGCCGTGATAGATAAGGACGGGGTGAAGTATCT 655
consensus_9469#3 ------------------------------------------------------------
consensus_9469#2 ------------------------------------------------------------
consensus_9469#0 GGACGACATTACGCCGGATTCGCTGAAGCAGGCTTCCGCCGCCTAGG-GTAATGTAACGT 753
consensus_9469#1 GGACGACATTACGCCGGATTCGCTGAAGCAGGCGTCCGCCGCCTAGGCGTAATGTAACGT 715
consensus_9469#3 ------------------------------------------------------------
consensus_9469#2 ------------------------------------------------------------
consensus_9469#0 AGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAA 813
consensus_9469#1 AGAATCTAGCGTCTTGCGTTCATTTATTGGGGAAAGGATTTTTTTGTCATGCGTTCGGAA 775
consensus_9469#3 ------------------------------------------------------------
consensus_9469#2 ------------------------------------------------------------
consensus_9469#0 TAAAGCCGATCAATGTAAAACTTAACAAACGTGATCTTCTTTTCTCATTTCTCGAGGTAA 873
consensus_9469#1 TAAAGCCGATCAATG-AAAACTTAAAAAAAAAAAAAAAAAAGGC---------------- 818
consensus_9469#3 ------------------------------------------------------------
consensus_9469#2 ------------------------------------------------------------
consensus_9469#0 GCAAAATATTCAATAAATGTTCCTTTCGACGAGGACGCTTACGGCTCTAAAATGGGCCAA 933
consensus_9469#1 ------------------------------------------------------------
consensus_9469#3 ------------------------------------------------------------
consensus_9469#2 ------------------------------------------------------------
consensus_9469#0 GTCACTCCTTATCACTAAATTCTTTCAATAAAACACCATTAAAATCAGTAAAAAAAAAAA 993
consensus_9469#1 ------------------------------------------------------------
consensus_9469#3 ------------------------------------------------------------
consensus_9469#2 ------------------------------------------------------------
consensus_9469#0 A 994
consensus_9469#1 -
consensus_9469#3 -
consensus_9469#2 -
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||