These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9504#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1000 fasta sequence [GCTCGGGGACATGTGGCCTTTT-----TTTTTTTTTTTTTTTTCGATTTTACTCTTTTATATTATAGATTCGTTCTTAGTGCTTACGTGTGTACACAATCGAAAGTATGCTACCGATGATAGTCCCAAATATGCCTGAACTGTTGTATTCCACCCCGATTGCCTTCGATTAAATCATACTTCTTAAACATATTC-TTTTTTTTTTCTTTTGCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAACCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTG-TTTATGGG---GTGT--GGGG-GT--AT-ATAGG-TATTTAATGCAAAGTGAGTAAAAAGCCCCCGGAATGGCCATGCAATGCCACGGCTTTGCTGTTACGAATGCGGGCA-GCGGGCA-C-CGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC-TGCACATTCTGCAGCAGGTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTCTACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATCGGCCATTGCGTCGCTCGGTTCGATCGTCACTGAAGCACACGGGAAAGAAGCAGTTCC--GCCAAACGACCGCTCACTGCCGGCTACGATTACTTTCTGAAATGTGAGGATATAATGCTACGATTTGTG----GCACGCACGCACGCACGCAACAACACCCAGCCCGTACTTTGCAATCGAATAAACAAACTAACTCGAAGAGAAAAAAAAACGCTGAAAACTGCATCTTTTGTCCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTT] [-] EMBL CNS097VI [GCTCGGGGACATGTGGCCTTTT TTTTTTTTTTTTTTTTCGATTTTACTCTTTTATATTATAGATTCGTTCTTAGTGCTTACGTGTGTACACAATCGAAAGTATGCTACCGATGATAGTCCCAAATATGCCTGAACTGTTGTATTCCACCCCGATTGCCTTCGATTAAATCATACTTCTTAAACATATTC TTTTTTTTTTCTTTTGCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAAGCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTG TTTATGGG GTGT GGGG GT AT ATAGG TATGTAATGCAAAGTGAGTAAAAAGCCCCCGGAATGAAAATGCAATGCCACGGCTTTGCTGTTACGAATGCGGGCA GCGGGCA C CGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC TGCACATTCTGCAGCAGGTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTCTACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATCGGCCATTGCGTCGCTCGGTACGATCGTCACTGAAGCACACGGGAAAGAAGCAGTTACAAACCAAACGACCGCTCACTGCCGGCTACGATTACTTTCTGAAATGTGAGGATATAATGCTACGATTTGTG GCACGCACGCACGCACGCAACAACACCCAGCCCGTAC TTGTTATCGAATcc ] [-] EMBL CNS09K9E [ TGTGGCCTTTTTTTTGTTTTTTTTTTTTTTTTCGATTTTATTTTTTTATATTATAGATTCGTTCTTAGTGCTTACGTGTGTATACAATCGAAAGTATGCTACCGATGATAGTCCCAAATATGCCTGAACTGTTGTATTCCACCCCGATTGCCTTCGATTAAATCATACTTCTTAAACATATTCTTTTTTTTTTTCTTTTGCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAAGCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAATTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTG TTTATGGG GTGT GGGG GT AT ATAGG TATGT ATGCAAAGTGAGTAAAAAGCCCCCGGAATGGCCATGCAATGCCACGGCTTTGCTGTTACGAATGCGGGCA GCGGGCA C CGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC TGCACATTCTGCAGCAGGTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTCTACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATCGGCCATTGCGTCGCTCGGTACGATCGTCACTGAAGCACACGGGAAAGAAGCAGTTCC GCCAAACGACCGCTCACTGCCGGCTACGATTACTTTCTGAAATGTGAGGATATAATGCTACGATTTGTG GCACGCACGCACGCACGCAACAACACCCAGCCCGTACTTTGCAATCGAATAAACAAACTAACTCGAAGAGAAAAAAAAACG ] [+] EMBL CNS094C2 [ TTTAAAATTTACTCTTTTATATTATAGATTCGTTCTTAGTGCTTACGTGTGTACACAATCGAAAGTATGCTACCGATGATAGTCCCAAATATGCCTGAACTGTTGTATTCCACCCCGATTGCCTTCGATTAAATCATACTTCTTAAACATATTCTTTTTTTTTTTCTTTTGCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAAGCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTT TTTATGGG GTGT GGGG GT AT ATAGG TATGT ATGCAAAGTGAGTAAAAATCCCCCGGAATGGCCATGCAATGCCACGGCTTTGCTGTTACGAATGCGGGCA GCGGGCACC CGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCCTTTTTTTTTCTGCAGCAGGTTTTGCACGTATATCGCCAGTc ] [+] EMBL AGA285224 [ TCTTTTATATTATAGATTCGTTCTTAGTGCTTACGTGTGTACACAATCGAAAGTATGCTACCGATGATAGTCCCAAATATGCCTGAACTGTTGTATTCCACCCCGATTGCCGTCGATTAAATCATACTTCTTAAACATATTC TTTTTTTTCTTTTGCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAACCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTG TGTGTGTGTTTGTGTACGGGT GT AT ATAGG TATTTAATGCAAAGTGAGTAAAAAGCCCCCGGAATGGCCATGCAATGCCACGGCTTTGCTGTTACGAATGCGGGCA GCGGGCA A CGGTCTACTTGTCCTGCCCCT ] [+] EMBL CNS09K9F [ TATTATAGATTCGTTCTTAGTGCTTACGTGTGTACACAATCGAAAGTATGCTACCGATGATAGTCCCAAATATGCCTGAACTGTTGTATTCCACCCCGATTGCATTCGATTAAATCATACTTCTTAAACATATTCTTTTTTTTTTTATTTTGCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAAGCGATTTACCAGCCTACAGTAAGTTTGGTACATTTAAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTG TTTATGGG GTGT GGGG GT AT ATAGG TATGT ATGCAAAGTGAGTAAAAAGCCCCCGGAATGGCCATGCAATGCCACGGCTTTGCTGTTACGAATGCGGGCA GCGGGCA CGCGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC TGCACATTCTGCAGCAGGTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTCTACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATCGGCCATTGCGTCGCTCGGTACGATCGTCACTGAAGCACACGGGAAAAAAGCAGTTCC GCCAAACGACCGCTCACTGCCGGCTACGATTACTTTCTGAAATGTGAGGATATAATGCTACGATTTGTG GCACGCACGCACGCACGCAACAACACCCAGCCCGTACTTTGCAATCGAATAAACAAACTAACTCGAAGAGAAAAAAAAACGCTGAAAACTGCATCTTTTGTCCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTT] [-] EMBL CNS094C1 [ TAGTGCTTACGTGT TACACAATCGAAAGTATGCTACCGATGATAGTCCCAAATATGCCTGAACTGTTGTATTCCACCCCGATTGCCTTCGATTAAATCATACTTCTTAAACATATTCTTTTTTTTTTTCTTTTGCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAAGCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTGAAAAAAGGG GTGT GGGG GT AT ATAGG TATGT ATGCAAAGTGAGTAAAAAGCCCCCGGAATGGCCATGCAATGCCACGGCTTTGCTGTTACGAATGCGGGCA GCGGGCA C CGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC TGCACATTCTGCAGCAGGTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTCTACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATCGGCCATTGCGTCGCTCGGTACGATCGTCACTGAAGCACACGGGAAAGAAGCAGTTCC GCCAAACGACCGCTCACTGCCGGCTACGATTACTTTCTGAAATGTGAGGATATAATGCTACGATTTGTG GCACGCACGCACGCACGCAACAACACCCAGCCCGTAC TTGCAATCGAATAAACAAACTAACTCGAAGAG AAAAAAAACGC GAA ] [+] EMBL CNS097VJ [ GTATGCCACCGATGATAGTCCCAAATATGCCTGAACTGTTGTATTCCACCCCGATTGCCTTCGATTAAATCATACTTCTTAAACATATTC TTTTTTTTTTCTTTTGCTGCCCGTTGAAACAAGCCTTACACCAATCTCTTTAAGCGATTAACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCCCCTGTAACTCAAGCGTAAATGCAAGGGGGGGGGTGGGGTGTGTTTTTTTT TTTATGGG GTGT GGGG GT AT ATAGG TATTTAATGCAAAGTGAGTAAAAAGCCCCCGGAATGGCCATGCAATGCCACGGCTTTTCTGTAACGAATGCGGGCACGCGGGCA C CGGTCTACTTTTCCTG ] [+] EMBL AGA282630 [ AATATGCCTGAACTGTTGTATTCCACCCCGATTGCCGTCGATTAAATCATACTTCTTAAACATATTC TTTTTTTCTTTTGCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAACCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTG TATGGG ] [+] EMBL AGA282055 [ cgTCGATTAAATCATAGTTCTTAAACATATTC TTTTTTTTCTTTTGCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAACCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTG TGTGTGTGTCTGNGT ACGG GT GT AT ] [-] EMBL BM589005 [ CTTTTGCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAACCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTG TAT GG GTGT GGGT GT ATAATAGGTTATTTAATGCAAAGTGAATAAAAAGCCCCCGGAATGGCCATGTAATGCCACGGCTTTGCTGTTACGAATGCGGGCA ACGGGCA A CGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC TGCACATTCTGCAGCAGGTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTCTACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATCGGCCATTGCGTCGCTCGGTTCGATCGTCACTGAAGCACACGGGAAAGAAGCAGTTCC GCCAAACGACCGCTCACTGCCGGCTACGATTACTTTCTGAGATGAGTGGATATAATGCTACGATTTGTG GCACGCACGCACGCACGCAACcgg ] [-] EMBL BM582535 [ GCTGCTCGTTGAAACAAGCCTTACACCAATCTCTTTAACCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTG TAT GG GTGT GGGT GT AT ATAGG TATTTAATGCAAAGTGAATAAAAAGCCCCCGGAATGGCCATGTAATGCCACGGCTTTGCTGTTACGAATGCGGGCA ACGGGCA A CGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTC ] [-] EMBL BX617232 [ aAAACAAGCCTTACACCAATCTCTTTAACCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTG TGTGTGTGTTTGTGTACGGGT GT AT ATAGG TATTTAATGCAAAGTGAGTAAAAAGCCCCCGGAATGGCCATGCAATGCCACGGCTTTGCTGTTACGAATGCGGGCA GCGGGCA A CGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC TGCACATTCTGCAGCAGGTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTCTACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATCGGCCATTGCGTCGCTCGGTTCGATCGTCACTGAAGCACACGGGAAAGAAGCAGTTCC GCCAAACGACCGCTCACTGCCGGCTACGATTACTTTCTGAAATGTGAGGATATAATGCTACGATTTGTG GCACGCACG ] [-] EMBL BM580381 [ ctTTTAACCGATTTACCAGCCTACAGTAAGTTTGGTACATTTTAAGCTTCTTCACTCTTCAACTCTGATAAAAATGAAAACTTCCGCTCCTGTAACTCAAGCGTAAATGCAAGGGGGTGGGTGGGGTGTGTGTGTGTG TGTAT GG GTGT GGGGTGTTAATAATAGG TAAGTAATGCAAAGTGAGTAAAAAGCCCCCGGAATGGCCATGCAATGCCACGGCTTTGCTGTTACGAATGCGGGCA GCGGGCA C CGATCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC TGCACATTCTGCAGCAGGTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTCTACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATCGGCCATTGCGTCGCTCGGTTCGATCGTCACTGAAGCACACGGGAAAGAAGCAGTTCC GCCAAACGACCGCTCACTGCCGGCTACGATTACTTTCTGAGATGAGTGGATATAATGCTACGATTTGTG GCcgg ] [-] EMBL BX608774 [ GGGTGGGGTGTGTGTGTG TAT GG GTGT GGGT GT AT ATAGG TATTTAATGCAAAGTGAATAAAAAGCCCCCGGAATGGCCATGTAATGCCACGGCTTTGCTGTTACGAATGCGGGCA ACGGGCA A CGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTAGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC TGCACATTCTGCAGCAGGTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTCTACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATAGGCCATTGCGTCGCTCGGTTCGATCGTCA ] [-] EMBL AL695833 [ tgTTAT GG TTGT GGGGTGT AT ATAGG TATTTAATGCAAAGTGAATAAAAAGCCCCCGGAATGGCCATGTAATGCCACGGCTTTGCTGTTACGAATGCGGGCA ACGGGCA A CGGTCTACTTGTCCTGCCCCTCGACGCCGGCCTGCTGCATCAGATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC TGCACATTCTGCAGCA GTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTCTACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATCGGCCATTGCGTCGCTCGGTTCGATCGTCACTGAAGCACACGGGAAAGAAGCAGTTCC GCCAAACGACCGCTCACTGCCGGCTACGATTACTTTCTGAGATGAGTGGATATAATGCTACGATTTGTG GCACGCACGCACGCACGCAACAACACCCAGCCCaaccctcgg ] [-] EMBL AGA283928 [ GATCGGCAATACTCTTTTCAAGGTCATCTATCCTGGTGCCCATATCGTCGATGCGGGAAATGATCTGGTCCGACATCGTCTGGAACTTGTCC TGCACATTCTGCAGCAGGTTTTGCACGTATATCGTCAGTTCCTGCATGTTCTTCGGGTATACGTTGCTGTTCAGCGAGTAGTTCTGCTCGGCATCGCTGTCGATTTCAGACTTTGCATCGGCCATTGCGTCGCTCGGTTCGATCGTCACTGAAGCACACGGGAAAGAAGCAGTTCC GCCAAACGACCGCTCACTGCCGGCTACGATTACTTTCTGAAATGTGAGGATATAATGCTACGATTTGTGGCACGCACGCACGCACGCACGCAACAACACCCAGCCCGTACTTTGCAAaaaaaa ] [-] EMBL AGA281000 [ GTTCGATCGTCACTGAAGCACACGGGAAAGAAGCAGTTCC GCCAAACGACCGCTCACTGCCGGCTACGATTACTTTGTGAGATGAGTGGACATAATGCTACGATTTGTG GCACGCACGCACGCACGCAACAACACCCAGCCCGTACTTTGCAATCGAGTAAACAAAa ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||