cluster # 9506

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Anopheles gambiae
cluster # 9506 cluster # 9506 Sequences # 17 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9506#0 length = 1046 sequences # 11
consensus_9506#1 length = 601 sequences # 3

consensus_9506#2 length = 518 sequences # 2
consensus_9506#3 length = 505 sequences # 1

consensusID : consensus_9506#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1046
fasta sequence

                              [GGTAGTTGGTGTACTATTTGGTGTGTACTAGCGGCAACGTGCTGAAAGTGAAAACGGAGCTGATAGTGGAGGCGGTGAGCAGGGAAATCGTACAAAGAATAAATCCATTTCACGACCATCCATCGCGCATGGTTCGGTAAATCGGATTGCCGCCGTATTGTAGCTCTGTCCCGCCGAGCTAGGGAAGCCAAACGCAACAAGGTGCCGGGTTTGGTGGACGCGTACAGCGCGCTCTGCGGCAGTCACAGTGTAGCTAGCGATCGGAACAGGCCGCGTTCTAACACGCTCGAAAGCAGAGGTCCCCCCCAGCTAGAGCACGGCGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGACGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTT-CCAGGACTGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGGCAGCTAGGTGGTG--------CAGCGTCGGGCAGCTGCAAGGATTGGTTCCTTTTTTATTGTTACG-TTTTTTTTTTTGGTTGTTGTTGTACAAGTTGTTCTGTTTTTTTGAACATGTGTTTTAGTGGAGTGTTCGTTAGTTTTTCGTTTCGTGATATTTTAAGGAGTTTATGTACATAAGG-GTCGACCAGGCAGAGCTATAGCGCTAATATGTACCGTAATTGATTTCGTCGAATAAATATAAATAGCAGGTCAACGTTG]

[+] EMBL BX625521             [GGTAGTTGGTGTACTATTTGGTGTGTACTAGCGGCAACGTGCTGAAAGTGAAAACGGAGCTGATAGTGGAGGCGGTGAGCAGGGAAATCGTACAAAGAATAAATCCATTTCACGACCATCCATCGCGCATGGTTCGGTAAATCGGATTGCCGCCGTATTGTAGCTCTGTCCCGCCGAGCTAGGGAAGCCAAACGCAACAAGGTGCCGGGTTTGGTGGACGCGTACAGCGCGCTCTGCGGCAGTCACAGTGTAGCTAGCGATCGGAACAGGCCGCGTTCTAACACGCTCGAAAGCAGAGGTCCCCCCCAGCTAGAGCACGACGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTTTCGGACGGCACGCGGTACGACGGAGCATTCAGCAATGGCGTCTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGCGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAANGCTTCTTCCCAGGACTGTCNGCTGGTGCGGAANAAGCGCTGCCCGGACGTG                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX628552             [                                                                                                                                                                                                                                                                          CAGGCCGCGTTCTAACACGCTCGAAAGCAGAGGTCCCCCCCAGCTAGAGCACGACGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTTTCGGACGGCACGCGGTACGACGGAGCATTCAGCAATGGCGTCTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGCGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTT CCAGGACTGTCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGGCAGCTAGGTGGTG        CAGCGTCGGGCGGCTGCAAAGATTGGTTCCTTTTTTATTGTTACG TTTTTTTTT   GTTGTTGTTGTACAAGTTGTTCTGTTTTTTTGAACATGTGTTTTAGTGGAGTGTTCGTTAGTTTTTCGTTTCGTGATATTTTAAGGAGTTTATGTACATAAGG GTCGACCAGGCAGAGCTATAGCGCTAATA                                                  ]
[+] EMBL BX613850             [                                                                                                                                                                                                                                                                                GCGTTCTAACACGCTCGAAAGCAGAGGTCCCCCCCAGCTAGAGCACGGCGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGACGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTT CCAGGACTGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGGCAGCTAGGTGGTG        CAGCGTCGGGCAGCTGCAA                                                                                                                                                                                                                              ]
[+] EMBL BX609530             [                                                                                                                                                                                                                                                                                     CTAACACGCTCGAAAGCAGAGGTCCCCCCCAGCTAGAGCACGGCGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGACGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTT  CAGGACTGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGGCAGCTAGGTGGTG        CAGCGTCGGGCAGCTGCAAGGATTGGTTCCTTTTTTATTGTTACG TTTTTTTTTTTGGTTGTTGTTGTACAAGTTGTTCTGTTTTTTTGAACATGTGTTTTAGTGGAGTGTTCGTTA                                                                                                                           ]
[+] EMBL BX615605             [                                                                                                                                                                                                                                                                                             CTCGAAAGCAGAGGTCCCCCCCAGCTAGAGCACGGCGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGACGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTT CCAGGACTGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGC                                                                                                                                                                                                                                                                              ]
[+] EMBL BX625529             [                                                                                                                                                                                                                                                                                                      AGAGGTCCCCCCCAGCTAGAGCACGGCGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGACGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGANTTCATGCNGGGCTGGTTCCACGGTCNCGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTT CCAGGACTGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGGCAGCTAGGTGGTG        CAGCGTCGGGCAGCTGCAANGATTGGNTCCTTTTTT                                                                                                                                                                                                             ]
[+] EMBL BX610127             [                                                                                                                                                                                                                                                                                                                                                             GTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGACGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCC                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX618341             [                                                                                                                                                                                                                                                                                                                                                                   TCAAATGTGGCGGCTATCGGTATGACTTTGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGACGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTT CCAGGACTGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGGCAGCTAGGTGGTG        CAGCGTCGGGCAGCTGCAAGGATTGGTTCCTTTTTTATTGTTACG TTTTTTTTTTTGGTTGTTGTTGTACAAGTTGTTCTGTTTTTTTGAACATGTGTTTTAGTGGAGTGTTCGTTAGTTTTTCGTTTCGTGATATTTTAAGGAGTTTATGTACATAAGG GTCGACCAGGCAGAGCTATAGCGCTAATATGTACCGTAATTGATTTCGTCGAATAAATATAAATAGCAG          ]
[+] EMBL BX615226             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGGTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTT CCAGGACTGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGA                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX607970             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTT CCAGGACTGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGGCAGCTAGGTGGTG        CAGCGTCGGGCAGCTGCAAGGATTGGTTCCTTTTTTATTGTTACGTTTTTTTTTTTTGGTTGTTGTTGTACAAGTTGTTCTGTTTTTTTGAACATGTGTTTTAGTGGAGTGTTCGTTAGTTTTTCGTTTCGTGATATTTTAAGGAGTTTATGTACATAAGG GTCGACCAGGCAGAGCTATAGCGCTAATATGTACCGTAATTGATTTCGTCGAATAAATAT                   ]
[+] EMBL BM624494             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGGCAGCTAGGTGGTGCAGCGTGTCAGCGTCGGGCAGCTGCAAGGATTGGTTCCTTTTTTATTGTTACGTTTTTTTTTTTTGGTTGTTGTTGTACAAGTTGTTCTGTTTTTTTGAACATGTGTTTTAGTGGAGTGTTCGTTAGTTTTTCGTTTCGTGATATTTTAAGGAGTTGATGTACATAAGGACTCGACCAGGCAGAGCTATAGCGCTAATATGTACCGTAATTGAATTCGTCGAATAAATATAGATACAAGGTCAACGTTG]




>consensus_9506#0
GGTAGTTGGTGTACTATTTGGTGTGTACTAGCGGCAACGTGCTGAAAGTGAAAACGGAGC
TGATAGTGGAGGCGGTGAGCAGGGAAATCGTACAAAGAATAAATCCATTTCACGACCATC
CATCGCGCATGGTTCGGTAAATCGGATTGCCGCCGTATTGTAGCTCTGTCCCGCCGAGCT
AGGGAAGCCAAACGCAACAAGGTGCCGGGTTTGGTGGACGCGTACAGCGCGCTCTGCGGC
AGTCACAGTGTAGCTAGCGATCGGAACAGGCCGCGTTCTAACACGCTCGAAAGCAGAGGT
CCCCCCCAGCTAGAGCACGGCGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAA
TGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGC
CAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGACGGAGCATTC
AGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAG
GGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATG
AAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGC
GACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTTCCAGGACTGCCGGCTGGTGCGG
AAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCC
CAGTGCGACCAGGGCAGCTAGGTGGTGCAGCGTCGGGCAGCTGCAAGGATTGGTTCCTTT
TTTATTGTTACGTTTTTTTTTTTGGTTGTTGTTGTACAAGTTGTTCTGTTTTTTTGAACA
TGTGTTTTAGTGGAGTGTTCGTTAGTTTTTCGTTTCGTGATATTTTAAGGAGTTTATGTA
CATAAGGGTCGACCAGGCAGAGCTATAGCGCTAATATGTACCGTAATTGATTTCGTCGAA
TAAATATAAATAGCAGGTCAACGTTG

consensusID : consensus_9506#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 601
fasta sequence

                              [CCGCGGACGCGTGGGCGGACGCGTGG--CGGAACAGGCCGCGTTCTAACACACTCGACAGCAGAACACGGCGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGATGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGA-CTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTTCCAGGACTGTCGGCTGGTGCGGAAGAAGCG-CTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGG-C-AGCTAGGTGGTGCAGCGTGTCAGCGTCGGGCAGCTGGCAAGGATTGGTTCCTTTTTTA]

[+] EMBL BM611184             [CCGCGGACGCGTGGGCGGACGCGTGG   GGAACAGGCCGCGTTCTAACACACTCGACAGCAGAACACGGCGCAGAAATGATGGACAGTGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGACGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGCGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGAGCTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTTCCAGGACTGTCGGCTGGTGCGGAAGAAGCGCCTGCCCGGACGTGATCAACGGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGGCC AGCTAGGTGGTGCAGCGTGTCAGCGTCGGGCAGCTGGCAAGG                ]
[+] EMBL BM583997             [            ccGCGGACGCGTGGGTCGGAACAGGCCGCGTTCTAACACACTCGACAGCAGAACACGGCGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGATGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGA CTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTTCCAGGACTGTCGGCTGGTGCGGAAGAAGCG CTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGG C AGCTAGGTGGTGCAGCGTGTCAGCGTCGGGCAGCT GCAAGGATTGGTTCCTTTTTTA]
[+] EMBL BM622623             [                            ccGAACAGGCCGCGTTCTAACACACTCGACAGCAGAACACGGCGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGATGGAGCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATGCAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGA CTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTTCCAGGACTGTCGGCTGGTGCGGAAGAAGCG CTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAGGG CAAGCTAGGTGGTGCAGCGTGTCAGCGTC                               ]




>consensus_9506#1
CCGCGGACGCGTGGGCGGACGCGTGGCGGAACAGGCCGCGTTCTAACACACTCGACAGCA
GAACACGGCGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTAT
CGGTATGACGATGGGACGCGCTACATTGGCGATTGGAATCAGCGCGGCCAGAAGCACGGC
ATGGGCTCGATGATGTTCTCGGACGGCACGCGGTACGATGGAGCATTCAGCAATGGCGTG
TGTTCCGGGCTCGGCGTGATGTGTTTTCCCGACGGTGCCAAATACGAGGGTGAATTCATG
CAGGGCTGGTTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGC
GAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCAC
GGATTCCCGCGCAACGAAGGCTTCTTCCAGGACTGTCGGCTGGTGCGGAAGAAGCGCTGC
CCGGACGTGATCAACCGTGCCCAGAAGGTGGCACTCATGGCACGCGCCCAGTGCGACCAG
GGCAGCTAGGTGGTGCAGCGTGTCAGCGTCGGGCAGCTGGCAAGGATTGGTTCCTTTTTT
A

consensusID : consensus_9506#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 518
fasta sequence

                              [CGCCCGAGNTACTTGGCAGATCGGATACGTGGATCCTCCCGGAGGGTTACGCTCGCAACCAACACGGGTATAACAGTCGTAGGTAGTTGGTGTACTATTTGGTGTGTACTAGCGGCAACGTGCTGAAAGTGAAAACGGAGCTGATAGTGGAGGCGGTGAGCAGGGTACCAGACAGGACCATTTTTTACGGGAAATCGTACAAAGAATAAATCCATTTCACGACCATCCATCGCGCATGGTTCGGTAAATCGGATTGCCGCCGTATTGTAGCTCTCTGGTCCCGCCGAGCTAGGGAAGCCAAACGCAACAAGGTGCCGGGTTTGGTGGACGCGTACAGCGCGCTCTGCGGCAGTCACAGTGTAGCTAGCGATCGGAACAGGCCGCGTTCTAACACGCTCGAAAGCAGAGGTCCCCCCCAGCTAGAGCACGACGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGG]

[+] EMBL AL932737             [CGCCCGAGNTACTTGGCAGATCGGATACGTGGATCCTCCCGGAGGGTTACGCTCGCAACCAACACGGGTATAACAGTCGTAGGTAGTTGGTGTACTATTTGGTGTGTACTAGCGGCAACGTGCTGAAAGTGAAAACGGAGCTGATAGTGGAGGCGGTGAGCAGGGTACCAGACAGGACCATTTTTTACGGGAAATCGTACAAAGAATAAATCCATTTCACGACCATCCATCGCGCATGGTTCGGTAAATCGGATTGCCGCCGTATTGTAGCTCTCTGGTCCCGCCGAGCTAGGGAAGCCAAACGCAACAAGGTGCCGGGTTTGGTGGACGCGTACAGCGCGCTCTGCGGCAGTCACAGTGTAGCTAGCGATCGGAACAGGCCGCGTTCTAACACGCTCGAAAGCAGAGGTCCCCCCCAGCTAGAGCACGACGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGATGGGACGCGCTACATTGGCGATTGG]
[+] EMBL AL693469             [                                                                                                                                                                                                                                                                                                        cgcaggntCAACAGGGTGCCGGGTTTGGTGGACGCGTACAGCGCGCTCTGCGGCAGTCACAGTGTAGCTAGCGATCGGAACAGGCCGCGTTCTAACACGCTCGAAAGCAGAGGTCCCCCCCAGCTAGAGCACGACGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCTATCGGTATGACGAT                        ]




>consensus_9506#2
CGCCCGAGNTACTTGGCAGATCGGATACGTGGATCCTCCCGGAGGGTTACGCTCGCAACC
AACACGGGTATAACAGTCGTAGGTAGTTGGTGTACTATTTGGTGTGTACTAGCGGCAACG
TGCTGAAAGTGAAAACGGAGCTGATAGTGGAGGCGGTGAGCAGGGTACCAGACAGGACCA
TTTTTTACGGGAAATCGTACAAAGAATAAATCCATTTCACGACCATCCATCGCGCATGGT
TCGGTAAATCGGATTGCCGCCGTATTGTAGCTCTCTGGTCCCGCCGAGCTAGGGAAGCCA
AACGCAACAAGGTGCCGGGTTTGGTGGACGCGTACAGCGCGCTCTGCGGCAGTCACAGTG
TAGCTAGCGATCGGAACAGGCCGCGTTCTAACACGCTCGAAAGCAGAGGTCCCCCCCAGC
TAGAGCACGACGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGTCAAATGTGGCGGCT
ATCGGTATGACGATGGGACGCGCTACATTGGCGATTGG

consensusID : consensus_9506#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 505
fasta sequence

                              [ACGCAAACAAGGCCGCCTGCATGTACACACTCAACTCACGCCTTTCTTTCCGTTTCAGGGTTTTCCCGACGGTGTCAAGTATGTGGGACGCAGCGCTTCCGGAACGCACCCTGTTATGCCCTTTTTGGCGCAGAACCCCCGGGGGCCGGAGTTTGGTGCCTTTTTGGTCGAATTGATTTCAAATCTTTATTCCCCCTCATCGTTTCAGAAACGAGGGTGAATTCATGCAGGGCTGGGTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTTCCAGGACCGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGGGGCACTCATGGCACGCGCCCAGGGCGACCAGGGCAGCTAGGTGGTGCAGCGTCGGGCAGCTGCAAGGAT]

[+] EMBL BX615324             [ACGCAAACAAGGCCGCCTGCATGTACACACTCAACTCACGCCTTTCTTTCCGTTTCAGGGTTTTCCCGACGGTGTCAAGTATGTGGGACGCAGCGCTTCCGGAACGCACCCTGTTATGCCCTTTTTGGCGCAGAACCCCCGGGGGCCGGAGTTTGGTGCCTTTTTGGTCGAATTGATTTCAAATCTTTATTCCCCCTCATCGTTTCAGAAACGAGGGTGAATTCATGCAGGGCTGGGTCCACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCGGACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTTCCAGGACCGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGGGGCACTCATGGCACGCGCCCAGGGCGACCAGGGCAGCTAGGTGGTGCAGCGTCGGGCAGCTGCAAGGAT]




>consensus_9506#3
ACGCAAACAAGGCCGCCTGCATGTACACACTCAACTCACGCCTTTCTTTCCGTTTCAGGG
TTTTCCCGACGGTGTCAAGTATGTGGGACGCAGCGCTTCCGGAACGCACCCTGTTATGCC
CTTTTTGGCGCAGAACCCCCGGGGGCCGGAGTTTGGTGCCTTTTTGGTCGAATTGATTTC
AAATCTTTATTCCCCCTCATCGTTTCAGAAACGAGGGTGAATTCATGCAGGGCTGGGTCC
ACGGTCACGGTGTGTTCTGGCGGGCGGACGGCATGAAGTACGAGGGCGAGTTTCGCGGCG
GACGCATCTGGGGTCTGGGACTGATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCA
ACGAAGGCTTCTTCCAGGACCGCCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCA
ACCGTGCCCAGAAGGGGGCACTCATGGCACGCGCCCAGGGCGACCAGGGCAGCTAGGTGG
TGCAGCGTCGGGCAGCTGCAAGGAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9506#1      ------------------------------------------------------------
consensus_9506#3      ------------------------------------------------------------
consensus_9506#0      GGTAGTTGGTGTACTATTTGGTGTGTACTAGCGGCAACGTGCTGAAAGTGAAAACGGAGC 60
consensus_9506#2      ------------------------------------------------------------
                                                                                  

consensus_9506#1      ------------------------------------------------------------
consensus_9506#3      ------------------------------------------------------------
consensus_9506#0      TGATAGTGGAGGCGGTGAGCAGGGAAATCGTACAAAGAATAAATCCATTTCACGACCATC 120
consensus_9506#2      ------------------------------------------------------------
                                                                                  

consensus_9506#1      ------------------------------------------------------------
consensus_9506#3      ------------------------------------------------------------
consensus_9506#0      CATCGCGCATGGTTCGGTAAATCGGATTGCCGCCGTATTGTAGCTCTGTCCCGCCGAGCT 180
consensus_9506#2      ------------------------------------------------------------
                                                                                  

consensus_9506#1      ------------------------------------------------------------
consensus_9506#3      ------------------------------------------------------------
consensus_9506#0      AGGGAAGCCAAACGCAACAAGGTGCCGGGTTTGGTGGACGCGTACAGCGCGCTCTGCGGC 240
consensus_9506#2      ------------------------------------------------------------
                                                                                  

consensus_9506#1      ------------CCGCGGACGCGTGGGCGGACGCGTGGCGGAACAGGCCGCGTTCTAACA 48
consensus_9506#3      ------------------------------------------------------------
consensus_9506#0      AGTCACAGTGTAGCTAGCGATCGGAACAGGCCGCGTTCTAACACGCTCGAAAGCAGAGGT 300
consensus_9506#2      -----------------------------------------------------------C 1
                                                                                  

consensus_9506#1      CACTCGACAGCAGAACACGGCGCAGAAATGA--TGGACAGCGTCCAGACGGGTGTGGTCA 106
consensus_9506#3      -------------------ACGCAAACAAGG--CCGCCTGCATGTACACACTCA-ACTCA 38
consensus_9506#0      CCCCCCCAGCTAGAGCACGGCGCAGAAATGA--TGGACAGCGTCCAGACGGGTGTGGTCA 358
consensus_9506#2      GCCCGAGNTACTTGGCAGATCGGATACGTGGATCCTCCCGGAGGGTTACGCTCGCAACCA 61
                                          ** * *   *       * *       **         **

consensus_9506#1      AATGTGGCGGCTATCGGTATGACG-ATGGGACGCGCTACATTGGCGAT-TGGAAT-CAGC 163
consensus_9506#3      CGCCTTTC---TTTCCGTTTCAGG-GTTTTCCCGACGGTGTCAAGTATGTGGGACGCAGC 94
consensus_9506#0      AATGTGGCGGCTATCGGTATGACG-ATGGGACGCGCTACATTGGCGAT-TGGAAT-CAGC 415
consensus_9506#2      ACACGGGTA--TAACAGTCGTAGGTAGTTGGTGTACTATTTGGTGTGTACTAGCGGCAAC 119
                                 *  * **   * *           *    *      *        ** *

consensus_9506#1      GCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACG-CGGTACGATGGA 222
consensus_9506#3      GCTTCCGGAA-CGCACCCTGTTAT-GCCCTTTTTGGCGCAGAACCCC-CGGGG-GCCGGA 150
consensus_9506#0      GCGGCCAGAAGCACGGCATGGGCTCGATGATGTTCTCGGACGGCACG-CGGTACGACGGA 474
consensus_9506#2      G-TGCTGAAAGTGAAAACGGAGCT-GATAGTGGAGGCGGTGAGCAGGGTACCAGACAGGA 177
                      *   *   **         *   * *    *     **     *             ***

consensus_9506#1      GCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTT--TTCCCGACGGTGCCA 280
consensus_9506#3      GTTTGGTGCCTTTTTGGTCGAATTGATTTCAAATCTTTAT-TC--CCCCTCATCGTTTCA 207
consensus_9506#0      GCATTCAGCAATGGCGTGTGTTCCGGGCTCGGCGTGATGTGTT--TTCCCGACGGTGCCA 532
consensus_9506#2      CCATTTTTTACGGGAAATCGTACAAAGAATAAATCCATTTCACGACCATCCATCGCGCAT 237
                         *               *                 * *           *  *     

consensus_9506#1      AATACG--AGGGTGAATTCATGCAGGGCTG--GTTCCACGGTCACGGTGTGTTCTGGCGG 336
consensus_9506#3      GAAACG--AGGGTGAATTCATGCAGGGCTG--GGTCCACGGTCACGGTGTGTTCTGGCGG 263
consensus_9506#0      AATACG--AGGGTGAATTCATGCAGGGCTG--GTTCCACGGTCACGGTGTGTTCTGGCGG 588
consensus_9506#2      GGTTCGGTAAATCGGATTGCCGCCGTATTGTAGCTCTCTGGTCCCGCCGAGCTAGGGAAG 297
                          **  *    * ***   ** *   **  * **   **** **  * * *  **  *

consensus_9506#1      GCGGACGGCATGAAGTACGAGGGCGAGTTT-CGCGGCGGACGCATCTGGGGTCTGGGACT 395
consensus_9506#3      GCGGACGGCATGAAGTACGAGGGCGAGTTT-CGCGGCGGACGCATCTGGGGTCTGGGACT 322
consensus_9506#0      GCGGACGGCATGAAGTACGAGGGCGAGTTT-CGCGGCGGACGCATCTGGGGTCTGGGACT 647
consensus_9506#2      CCAAACGCAACAAGGTGCCGGGTTTGGTGGACGCGTACAGCGCGCTCTGCGGCAGTCAC- 356
                       *  ***  *  * ** *  **    **   ****     ***     * * * *  ** 

consensus_9506#1      GATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTTCCAGGACTG 455
consensus_9506#3      GATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTTCCAGGACCG 382
consensus_9506#0      GATTACGTTCAGCGACCAGAGCCACGGATTCCCGCGCAACGAAGGCTTCTTCCAGGACTG 707
consensus_9506#2      -AGTGTAGCTAGCGATCGGA---ACAGG---CCGCGTTCTAA---CACGCTCGAAAGCAG 406
                       * *      ***** * **   ** *    *****     *   *    ** *   * *

consensus_9506#1      TCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACT 515
consensus_9506#3      CCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGGGGCACT 442
consensus_9506#0      CCGGCTGGTGCGGAAGAAGCGCTGCCCGGACGTGATCAACCGTGCCCAGAAGGTGGCACT 767
consensus_9506#2      AGGTCCCCCCCAGCTAGAGCACGACGCAGAAATGATGGACAGCGTCCAGACGGGTGTGGT 466
                        * *     * *    *** *  * * **  ****  ** * * ***** **  *   *

consensus_9506#1      CATGGCACGCGCCCAGTGCGACCAGGGCAGCTAGGTGGTGCAGCGTGTCAGCGTCGGGCA 575
consensus_9506#3      CATGGCACGCGCCCAGGGCGACCAGGGCAGCTAGGTGGTGCAGCGT--------CGGGCA 494
consensus_9506#0      CATGGCACGCGCCCAGTGCGACCAGGGCAGCTAGGTGGTGCAGCGT--------CGGGCA 819
consensus_9506#2      CAA---ATGTGGC---GGCTATCGGTATGACGATGGGACGCGCTACA-------TTGGCG 513
                      **    * * * *    ** * * *     * * * *  **               *** 

consensus_9506#1      GCTGGCAAGGATTGGTTCCTTTTTTA---------------------------------- 601
consensus_9506#3      GCTG-CAAGGAT------------------------------------------------ 505
consensus_9506#0      GCTG-CAAGGATTGGTTCCTTTTTTATTGTTACGTTTTTTTTTTTGGTTGTTGTTGTACA 878
consensus_9506#2      ATTGG------------------------------------------------------- 518
                        **                                                        

consensus_9506#1      ------------------------------------------------------------
consensus_9506#3      ------------------------------------------------------------
consensus_9506#0      AGTTGTTCTGTTTTTTTGAACATGTGTTTTAGTGGAGTGTTCGTTAGTTTTTCGTTTCGT 938
consensus_9506#2      ------------------------------------------------------------
                                                                                  

consensus_9506#1      ------------------------------------------------------------
consensus_9506#3      ------------------------------------------------------------
consensus_9506#0      GATATTTTAAGGAGTTTATGTACATAAGGGTCGACCAGGCAGAGCTATAGCGCTAATATG 998
consensus_9506#2      ------------------------------------------------------------
                                                                                  

consensus_9506#1      ------------------------------------------------
consensus_9506#3      ------------------------------------------------
consensus_9506#0      TACCGTAATTGATTTCGTCGAATAAATATAAATAGCAGGTCAACGTTG 1046
consensus_9506#2      ------------------------------------------------