These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9507#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1756 fasta sequence [TGTAGACGAAAATACATGTTTTCTTACGAAAAAAAAATATCTTCAACTAGGTAGTTCTGGAGTATGGATAGACGACGGATGGATAAAATACATTACTTATACGCAATGAGTCTTTCTCTGTATGTGTAGTCGAATACATGCCAGGCCAGGCCATTCTATGAGGTTTGCAGCATTGAACACATTCTACATTTTAACTGATTTTTCGCAAACTCTACACCGCACCTGTTCTCCTGCCCTGTCTAAACCTGCCCGCACTTGCGTAGTTGGCCTTGCGTAGAGCTGCTGCTGCCTAGAACTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTCTCTGTAAACGTATATGCTACATGGCGCACTGTGACCGAGTGTTCTTACCGCAGAGAATGACTCACAGCGCTTACTTCGCTACTTCCTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTTCACTCTTGGGCTTCGCCTCCACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCTCAGCCGCGACCACCCCACTGCCGGA-CGT-CGC-CGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGC-TTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCG-----G-GTCCACC-CCAGC-G-TTCGCAATGTCCAGGATGTACTGCATGCAGATGCACTGGTGGGCCACGTGCGCCATCAACTCGTGCTTCTCCTGCATCTCCAGCTCGATGCACCAGATGACCAGATAGTTGGGCATGTCCTCACACACCAGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC-TCCC-GGC-GATTG-A-TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCAC-GCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGGAATGAGCGCTTTTTCACTGCACCTCTTGTTTTTTGTTGCTTCCCTGCGGGCGG] [+] EMBL CNS08ZT1 [TGTAGACGAAAATACATGTTTTCTTACGAAAAAAAAATATCTTCAACTAGGTAGTTCTGGAGTATGGATAGACGACGGATGGATAAAATACATTACTTATACGCAATGAGTCTTTCTCTGTATGTGTAGTCGAATACATGCCAGGCCAGGCCATTCTATGAGGTTTGCAGCATTGAACACATTCTACATTTTAACTGATTTTTCGCAAACTCTACACCGCACCTGTTCTCCTGCCCTGTCTAAACCTGCCCGCACTTGCGTAGTTGGCCTTGCGTAGAGCTGCTGCTGCCTAGAACTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTCTCTGTAAACGTATATGCTACATGGCGCACTGTGACCGAGTGTTCTTACCGCAGAGAATGACTCACAGCGCTTACTTCGCTACTTCCTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTTCACTCTTGGGCTTCGCCTCCACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCTCAGCCGCGACCACCCCACTGCCGGA CGT CGC CGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGCGTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGA ] [-] EMBL BM582297 [ GTTTCTGTAAACGTATATGCTACATGGCGCACTGTGACCGAGTGTTCTTACCGCAGAGAATGACTCACAGCGCTTACTTCGCTACTTCCTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTTCACTCTTGGGCTTCGCCTCCACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCTCAGCCGCGACCACTCCACTCCCAGA CGT CGC CGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGC TTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCAAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCG G GTCCACCTCCAGCTGCTTCGCAATGTCCAGGATGTACTGCATGCAGATGCACTGGTGGGCCACGTGCGCgg ] [-] EMBL CNS08ZT0 [ CGGAGCGTGCGCGCGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGC TTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCG G GTCCACCTCCAGC G TTCGCAATGTCCAGGATGTACTGCATGCAGATGCACTGGTGGGCCACGTGCGCCATCAACTCGTGCTTCTCCTGCATCTCCAGCTCGATGCACCAGATGACCAGATAGTTGGGCATTTCCTCACACACGAGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGggggg ] [-] EMBL BM575517 [ GCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGC TTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTGTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCG G GTCCACCTCCAGCTGCTTCGCAATGTCCAGGATGTACTGCATGCAGATGCACTGGTGGGCCACGTGCGCCATCAGCTCGTGCTTCTCCTGCATCTCCAGCTCGATGCACCAGATGACCAGATAGTTGGGCATGTCCTCACACACCAGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCC GGC GATTG A TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACcgg ] [-] EMBL BM592369 [ GATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCGCCCACGCGTCCGCC CACGC G TCCGCgg ] [-] EMBL BM615555 [ AGCTCGATGCACCAGATGACCAGATAGTTGGGCATGTCCTCACACACCAGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATGAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCC GGC GATTG A TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCAC GCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCGAAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTTAACCGCTAGCCGCcgg ] [-] EMBL BM625478 [ AGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCC GGC GATTG A TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCAC GCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGg ] [-] EMBL BM626826 [ GGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCC GGC GATTG A TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGTGCAGCTCTTCCTCCTCCTGCCGCAC GCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGGAATGAGCGCTTTTTCACTGCACCTCTTGTTTTTTGcgg ] [-] EMBL BM606549 [ CGTACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCCGGGCGGATTG A TTTGACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCACGGCG TCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGGAATGAGCGCTTTTTCACcgg ] [-] EMBL BM656147 [ TACTTCCGCAGCATGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCC TCCC GGC GATTG A TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCACGGCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGGAATGAGCGCTTTTTCACTGCACCTCTTGTTTTTTGTTGCTTCCCTGCGG ] [-] EMBL BM609582 [ TGCCGAACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCAGTCAGCTCCTCC TCCC GGC GATTG ATTTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCACGGCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCGAAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTTAACCGCTAGCCGCTTGGAATGAGCGCTTTTTCACgg ] [-] EMBL BM595923 [ TTTTGATAAAATCGCGCAGATTCATCTCCTTCTGCTCCTCGGTCAGCTCCTCCTTCCC GGCGGATTGAA TTGCACTCTTGTTGATGACCGTCTTGGCGAAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCAC GCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGGAcgg ] [-] EMBL BM580898 [ TGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGCTCTTCCTCCTCCTGCCGCACGGCG TCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTCAGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCCGCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGCTCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTGTCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATGCCGCTGTGTGCTCTTACCCTACGGCGAAAAAGGTAAAGCTTACTGGAAATTTACTTTCGTGACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTTAACCGCTAGCCGCTTGGAATGAGCGCTTTTTCACTGCACCTCTTGTTTTTTGTTGCTTCCCTGTTTGCGG] consensusID : consensus_9507#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 818 fasta sequence [TAGGTNGTTCTGGAGTATGATNGCCGCGGANGGATGGAAGACNNTTATTTGTGAGCCAGTGANTCTTGCNCTGGTATTGTGTGGTCGGAATACAGGCCCNAGCTCAGGCCAGTTGCNATGAGGTTGNCCGCAGTNTGAACACAGTGCGACAATTTTTGAACTGGATTNTTTCCGCATNNACCGCTTACANCGCACCCTGGTTTCTTCCTGGTGCCCTGTGTAAACNCTGCCCGCACGTGTGCGTAGTTGGCCTTGCGTAGAGCTGCTGCGTGCCCTAGNACTTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTGTTCGTGTAAACGTATATGCTACATGGCGCACTGTGGACCGAGTGTTTCGTTACCGCCAGAGAATGACTCACAGCGCTTACTTCGNCTACCTTCCCGTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTTCACTCTNTGGGCTTCGCCNTCCAACGTACACCGGCTCCTCCTCTGCATCATCTCCACCNTCAGCCGCGACCACTCCACTCCCAGACGTCGCCGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCAAACACCTCGACCAGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTNCAGCTTCTNCTGGCCCGCTTGCAGATGCTAACCTCGGGGA] [-] EMBL AL694564 [TAGGTNGTTCTGGAGTATGATNGCCGCGGANGGATGGAAGACNNTTATTTGTGAGCCAGTGANTCTTGCNCTGGTATTGTGTGGTCGGAATACAGGCCCNAGCTCAGGCCAGTTGCNATGAGGTTGNCCGCAGTNTGAACACAGTGCGACAATTTTTGAACTGGATTNTTTCCGCATNNACCGCTTACANCGCACCCTGGTTTCTTCCTGGTGCCCTGTGTAAACNCTGCCCGCACGTGTGCGTAGTTGGCCTTGCGTAGAGCTGCTGCGTGCCCTAGNACTTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTGTTCGTGTAAACGTATATGCTACATGGCGCACTGTGGACCGAGTGTTTCGTTACCGCCAGAGAATGACTCACAGCGCTTACTTCGNCTACCTTCCCGTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTTCACTCTNTGGGCTTCGCCNTCCAACGTACACCGGCTCCTCCTCTGCATCATCTCCACCNTCAGCCGCGACCACTCCACTCCCAGACGTCGCCGCAGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCAAACACCTCGACCAGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTNCAGCTTCTNCTGGCCCGCTTGCAGATGCTAACCTCGGGGA] consensusID : consensus_9507#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 672 fasta sequence [TTCGCAAACTCTACACCGGCATCTGTTCTCCTGCCCTGTCTAAACCTGTCCGCACTTGCGTAGAGCTGCTGCTGCCTAGAACTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTTTCTGTAAACGTATATACTACATGGCGCACTGTGACCGAGTGTTCTTACCGCAGAGAATGACTCACAACGCTTGCTTCGCCACCTCCTGCTCCTTACTATCACCTTCCGCTTGCGCATCTTCACTCTTGGGCTTCGCCTCCACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCTCAGCCGCGACCACCCCACTTCCCAGACGTCGCCGCATGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGCGG] [-] EMBL BM621982 [TTCGCAAACTCTACACCGGCATCTGTTCTCCTGCCCTGTCTAAACCTGTCCGCACTTGCGTAGAGCTGCTGCTGCCTAGAACTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTTTCTGTAAACGTATATACTACATGGCGCACTGTGACCGAGTGTTCTTACCGCAGAGAATGACTCACAACGCTTGCTTCGCCACCTCCTGCTCCTTACTATCACCTTCCGCTTGCGCATCTTCACTCTTGGGCTTCGCCTCCACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCTCAGCCGCGACCACCCCACTTCCCAGACGTCGCCGCATGCGGCACTCTTTGCATCCGGCACCCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTTGGCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCGAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGGATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCCTCCTGGATGCGCTGGAAGCGG] [-] EMBL BM654716 [ GCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCTCGGGCAGCGATTCAAACACCTCGACCGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTGCGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCcgg ] consensusID : consensus_9507#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 598 fasta sequence [CCGGGGTAAGAGCACACAGCGGCATAAAGATGGTTGATTACAGCAAATGGAAAGATATTGAGATCTCGGATGATAAGGAGATGAAGGAAGAAGAAAAAGCTAAGAAGACTAAAGATGAAGAAGAAGCCAAGAAGATGAAAGAAGATGCTGAAGTCAGCAATAAGAAATCAGATAAGGAATATAAGAAAAAGATAGATGAAACAGAAACTGAGAAAAAGGTAGAAGAAAGTAACAAAAAGAAAGAAGAGAAAGAGGCCATTCAGAATAAGAAAGAAGAAGAAGCTATACAGATTAAGCTTGATGAAGAAAAGAAGGAAGCAGAAGAAATCAATAAGAATCAGAAAGAGGAAGAAGCCAAGAAAAAGCAGAGAGAGCAAGAAGCCAAGAAGAAGAAGGAGGAGGAAGATTCCAAGAAGAAGAAGGAAGAGGAAGAAGCTAGAAAAGAGAAAGAAGAGGAAGAAGTTAAGAAGAAGAATGCTGAAGAAAAGGCTAAGAAGAAGAAGGAAGAGGAAGAGGCCAAGAAGAAGCAGGATGAGGAAGCTGCCAAGAAAAAGAAAGAAGAGGTAGAAGCCAAGAAGCAGAAGGAAGAGGAAGAAGC] [+] EMBL BM655906 [CCGGGGTAAGAGCACACAGCGGCATAAAGATGGTTGATTACAGCAAATGGAAAGATATTGAGATCTCGGATGATAAGGAGATGAAGGAAGAAGAAAAAGCTAAGAAGACTAAAGATGAAGAAGAAGCCAAGAAGATGAAAGAAGATGCTGAAGTCAGCAATAAGAAATCAGATAAGGAATATAAGAAAAAGATAGATGAAACAGAAACTGAGAAAAAGGTAGAAGAAAGTAACAAAAAGAAAGAAGAGAAAGAGGCCATTCAGAATAAGAAAGAAGAAGAAGCTATACAGATTAAGCTTGATGAAGAAAAGAAGGAAGCAGAAGAAATCAATAAGAATCAGAAAGAGGAAGAAGCCAAGAAAAAGCAGAGAGAGCAAGAAGCCAAGAAGAAGAAGGAGGAGGAAGATTCCAAGAAGAAGAAGGAAGAGGAAGAAGCTAGAAAAGAGAAAGAAGAGGAAGAAGTTAAGAAGAAGAATGCTGAAGAAAAGGCTAAGAAGAAGAAGGAAGAGGAAGAGGCCAAGAAGAAGCAGGATGAGGAAGCTGCCAAGAAAAAGAAAGAAGAGGTAGAAGCCAAGAAGCAGAAGGAAGAGGAAGAAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9507#0 TGTAGACGAAAATACATGTTTTCTTACGAAAAAAAAATATCTTCAACTAGGTAGTTCTGG 60 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 -------------------------------TAGGTNGTTCTGGAGTATGATNGCCGCGG 29 consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 AGTATGGATAGACGACGGATGGATAAAATACATTACTTATACGCAATGAGTCTTTCTCTG 120 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ANGGATGGAAGACNNTTATTTGTGAGCCAGTGANTCTTGCNC-TGGTATTGTGTGGTCGG 88 consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 TATGTGTAGTCGAATACATGCCAG--GCCAGGCCATTCTATGAGGTTTGCA-GCATTGAA 177 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 AATACAGGCCCNAGCTCAGGCCAGTTGCNATGAGGTTGNCCGCAGTNTGAACACAGTGCG 148 consensus_9507#3 ---------------------------------------CCGGGGTAAGAGCACACAGCG 21 consensus_9507#0 CACATTCTACATTTTAACTGATTTTTCGCAAACT--CTACACCG-CACCTGTTCTCCT-- 232 consensus_9507#2 ------------------------TTCGCAAACT--CTACACCGGCATCTGTTCTCCT-- 32 consensus_9507#1 ACAATTTTTGAACTGGATTNTTTCCGCATNNACCGCTTACANCGCACCCTGGTTTCTTCC 208 consensus_9507#3 GCA----TAAAGATGGTTGATTACAGCAAATGGAA-AGATATTGAGATCTCGGATGATAA 76 * * * * ** * * consensus_9507#0 ----GCCCTGTCTAAACC-TGCCCGCACTTG--CGTAGTTGGCCTTGCGTAGAGCTGCTG 285 consensus_9507#2 ----GCCCTGTCTAAACC-TGTCCGCACTTG--CG--------------TAGAGCTGCTG 71 consensus_9507#1 TGGTGCCCTGTGTAAACNCTGCCCGCACGTGTGCGTAGTTGGCCTTGCGTAGAGCTGCTG 268 consensus_9507#3 GGAGATGAAGGAAGAAGAAAAAGCTAAGAAGACTAAAGATGAA-----GAAGAAGCCAAG 131 * ** * * * *** * consensus_9507#0 C-TGCC-TAGAACTTT-GCAGAGAAGCGTTGGGAAAGGATGTTTTGTCTC--TGTAAACG 340 consensus_9507#2 C-TGCC-TAGAACTTT-GCAGAGAAGCGTTGGGAAAGGATGTTTTGTTTC--TGTAAACG 126 consensus_9507#1 CGTGCCCTAGNACTTTTGCAGAGAAGCGTTGGGAAAGGATGTTTTGTGTTCGTGTAAACG 328 consensus_9507#3 AAGATGAAAGAAGATGCTGAAGTCAGCAATAAGAAATCAGATAAGGAATATAAGAAAAAG 191 ** * * * *** * **** * * * * * *** * consensus_9507#0 TATATGCTACATGGCGCACTGTG-ACCGAGTGTTC----TTACCGC-AGAGAATGACTCA 394 consensus_9507#2 TATATACTACATGGCGCACTGTG-ACCGAGTGTTC----TTACCGC-AGAGAATGACTCA 180 consensus_9507#1 TATATGCTACATGGCGCACTGTGGACCGAGTGTTTCG--TTACCGCCAGAGAATGACTCA 386 consensus_9507#3 -ATAGATGAAACAGAA-ACTGAGAAAAAGGTAGAAGAAAGTAACAAAAAGAAAGAAGAGA 249 *** * * * **** * * ** ** * * ** * * consensus_9507#0 CAGCGCTTACTTCGCT-ACTTCC---TGCTCCTTACTATCGCCTTCCGCTTGCGCATCTT 450 consensus_9507#2 CAACGCTTGCTTCGCC-ACCTCC---TGCTCCTTACTATCACCTTCCGCTTGCGCATCTT 236 consensus_9507#1 CAGCGCTTACTTCGNCTACCTTCCCGTGCTCCTTACTATCGCCTTCCGCTTGCGCATCTT 446 consensus_9507#3 AAGAGGCCATTCAGAATAAGAAA-------GAAGAAGAAGCTATACAGATTAAGCTTGAT 302 * * * * * * * * * * ** ** * * consensus_9507#0 CACTCTT-GGGCTTCGCCTCC--ACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCT 507 consensus_9507#2 CACTCTT-GGGCTTCGCCTCC--ACGTACACCGGCTCCTCCTCTGCATCATCTCCACCCT 293 consensus_9507#1 CACTCTNTGGGCTTCGCCNTCCAACGTACACCGGCTCCTCCTCTGCATCATCTCCACCNT 506 consensus_9507#3 GAAGAAAAGAAGGAAGCAGAAGAAATCAATAAGAATCAGAAAGAGGAAGAAGCCAAGAAA 362 * * ** * * * ** * * * * * consensus_9507#0 CAGCCGCGACCACCCCACTGCC-GGACGTCGCCGCA-GCGGCACTCTTTGCATCCGGCAC 565 consensus_9507#2 CAGCCGCGACCACCCCACTTCCCAGACGTCGCCGCATGCGGCACTCTTTGCATCCGGCAC 353 consensus_9507#1 CAGCCGCGACCACTCCACTCCC-AGACGTCGCCGCA-GCGGCACTCTTTGCATCCGGCAC 564 consensus_9507#3 AAGCAGAGAGAGCAAGAA-GCCAAGAAGAAGAAGGAGGAGGAAGATTCCAAGAAGAAGAA 421 *** * ** * * ** ** * * * * * ** * * * consensus_9507#0 CCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTT 625 consensus_9507#2 CCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTT 413 consensus_9507#1 CCACAAGCCCGAGTCGATGCAGCGCTGCAGATGTACGCGGGCTTCCTCCGGCGGTAGTTT 624 consensus_9507#3 GGAAGAGGAAGAAGCTA-GAAAAGAGAAAGAAGAGGAAGAAGTTAAGAAGAAGAATGCTG 480 * ** ** * * * * * *** * * ** * * * * consensus_9507#0 G-GCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCT 684 consensus_9507#2 G-GCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCT 472 consensus_9507#1 G-GCCATCGCTTCCTGCAGCATGCCGATGTCGCGCGTCTCGAAGCACTTCTGCAGCTCCT 683 consensus_9507#3 AAGAAAAGGCTAAGAAGAAGAAGGAAGAGGAAGAGGCCAAGAAGAAGCAGGATGAGGAAG 540 * * *** * * * * * * **** * consensus_9507#0 CGGGCAGCGATTCGAACACCTCGACC-GGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTG 743 consensus_9507#2 CGGGCAGCGATTCGAACACCTCGACC-GGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTG 531 consensus_9507#1 CGGGCAGCGATTCAAACACCTCGACCAGGGTCCAGCCCGCCCGGTCCGAGCCGGGCCTTG 743 consensus_9507#3 CTGCCAAGAAAAAGAAAGAAGAGGTAGAAGCCAAG---AAGCAGAAGGAAGAGGAAGAAG 597 * * ** * ** * * * ** * * ** ** * consensus_9507#0 CGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGG 803 consensus_9507#2 CGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTGCAGCTTCTCCTGGGCCCGCTTGCGG 591 consensus_9507#1 CGCTCCTCCTCCTCCTGCTCCTCGATCAGCTTCTNCAGCTTCTNCTGG-CCCGCTTGCAG 802 consensus_9507#3 C----------------------------------------------------------- 598 * consensus_9507#0 ATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCC 863 consensus_9507#2 ATGCGCTCCTTGAACGCTTCGATCTCGCTGAGGAACTGGTTCTTGTACTCGTTCTCCGCC 651 consensus_9507#1 ATGCTAACCTCGGGGA-------------------------------------------- 818 consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 TCCTGGATGCGCTGGAAGAAGGACGCGACGCAGGCCCGCGGGTCCACCCCAGCGTTCGCA 923 consensus_9507#2 TCCTGGATGCGCTGGAAGCGG--------------------------------------- 672 consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 ATGTCCAGGATGTACTGCATGCAGATGCACTGGTGGGCCACGTGCGCCATCAACTCGTGC 983 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 TTCTCCTGCATCTCCAGCTCGATGCACCAGATGACCAGATAGTTGGGCATGTCCTCACAC 1043 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 ACCAGGTGGTGCTTGTCCTGCAGGTACTTCTTCGAATCGTCGTACTTCCGCAGCATGCCG 1103 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 AACTCCTTCATCTGCTTCTCGTACTTTTTGATAAAATCGCGCAGATTCATCTCCTTCTGC 1163 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 TCCTCGGTCAGCTCCTCCTCCCGGCGATTGATTGCACTCTTGTTGATGACCGTCTTGGCG 1223 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 AAGCCCGGCTTGCTGATCGTGTCCACGTTCCACGGTTGCGACTTTTCCTTCTTGCGCAGC 1283 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 TCTTCCTCCTCCTGCCGCACGCGCTCCTGCTCCTTCTCCAGCTCGTCGATGATTTTCTTC 1343 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 AGCTCGTCCAGATTGCCCTCCTGCCGCTGCAGCTTATCCTTCGCCTCCTTCAGCTTTTCC 1403 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 GCCGTCGTTTGCTTCTTCTTCTCTACCGTTTCCTTCTTTTTCTCCTGCTCCTGCATCCGC 1463 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 TCGACGCGGGCCTGATGCCGCCAGCGGAAGAGCGACGGTGTGTCAATGTTGGGATGCGTG 1523 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 TCGTCCTCATCATCCGAGATCTCAATATCTTTCCATTTGCTGTAATCAACCATCTTTATG 1583 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 CCGCTGTGTGCTCTTACCCTACGGCTTAAAAGGTAAAGCTTACTGGAAATTTACTTTCGT 1643 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 GACTGGGATGTATCGCGTATTTCCGGCACAATTCTTCCAATTAACCCGCTAGCCGCTTGG 1703 consensus_9507#2 ------------------------------------------------------------ consensus_9507#1 ------------------------------------------------------------ consensus_9507#3 ------------------------------------------------------------ consensus_9507#0 AATGAGCGCTTTTTCACTGCACCTCTTGTTTTTTGTTGCTTCCCTGCGGGCGG 1756 consensus_9507#2 ----------------------------------------------------- consensus_9507#1 ----------------------------------------------------- consensus_9507#3 ----------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||