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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9509#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 855 fasta sequence
[CCGCGAAAACAGAGCACCAAAAAGGACGCAAAATCCCACGA--TCCCTCGCACGCACGCAATTGCCCTGCAGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG-A-AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGATGTGGGTCATATATTGATTTAACTTTGCAGAAAGAAGGTCACGTGCGCA-CAGGG-GTTCGTCTTTCGTGCA-TTTTGCATCCATGTGGGGTTCGCTTTCGTTGCGAATATTAATAAAACTCCCATTGAATCATTGAAAAAGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGGGGGGGG]
[+] EMBL BM580735 [CCGCGAAAACAGAGCACCAAAAAGGACCCAAAATCCCACGA TCCCTCGCACGCACGCAATTGCCCTGCTGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCACGACCG TTGCAGATATCAGATATCATCCAGC ]
[+] EMBL BM580765 [ cCGCAAAATCCCACGA TCCCTCGCACGCACGCAATTGCCCTGCAGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCA ]
[+] EMBL AL692615 [ cccgaggttAATCCCACGA TCCCTCGCACGCACGCAATTGCCCTGCAGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGAT ]
[+] EMBL AL930787 [ agAATTCCCCGAGGTTTCTCGCACGCACGCAATTGCCCTGCAGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGATGTGGG ]
[+] EMBL BX617138 [ TGCCCTGCTGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATG ]
[+] EMBL BM655894 [ ccgCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCACGACCG TTGCAGATATCAGATATCATCCAGCACGCTAACCATTACAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGATGTGGGTCATATATTGATTTAACTTTGCAGAAAGAAGGTCACGTGCGCATGAGGA GTTCGTCTTTCGTGCATTTTTGCATCCATGTGGGGGTCGCTTTCGTTG ]
[+] EMBL BM594184 [ ccgCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTG A AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTG ]
[+] EMBL CNS08GLZ [ CCGTGCTGCAGCGTAAACTCGAAGCGGAG TGAA AAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAA CAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTACCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTTTTTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGAAATGGGTCATATATTGATTTAACTTTGCAGAAAGAAGGTCACGTGCGCA CAGGG GTTCGTCTTTCGTGCA TTTTGCATCCATGTGGGGTTCGCTTTCGTTGCGAATATTAATAAAACTCCCATTGAATCATTGAAAAAGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGGGGGGGG]
[+] EMBL CNS08GOS [ AAGCGGA CTG ATAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAA CAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTACCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTTTTTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGTTGTGGGTCATATATTGATTTAACTTTGCAGAAAGAAGGTCACGTGCGCA CAGGGTGTTCGTCTTTCGTGCA TTTTGCATCCATGTGGGGTTCGCTTTCGTTGCGAATATTAATAAAACTCCCATTGAATCATTGAAAAAGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGGG ]
[-] EMBL CNS08OUY [ ttccctaagATATTCATTTAA ATGCAGAAAGAAGGTTACGTGCGCAGCAGGG GTTCGTCTTTCGTGCA TTTTGCATCCATGTGGGGTTCGCTTTCGTTGCGAATATTAATAAAACTCCCATTGAATCATTGAAAAAGCGAAAAAA ]
consensusID : consensus_9509#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 679 fasta sequence
[TCAGCAGAATCCCCGAGGTTAATGCTAGAAGCCAACCAACACGNGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATACACGAAGGAGCTAGAAGCGGTGCGGGGAGAACATATACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATAGCAGTACCAGAGCCAGATGGCGATAAGCAAAGCAGTAGTNGTACGTACGACCGTTTGCTGATAATTCAGATATACATCCAGCACGCTAACCATATGCAATCATATTATCCGGAATAAATCGGGCACGCACCATCTATCTAGTATTGAGCTATCGAACCAGCTACTATTTTTCCACGTTAATTTGTTGAGGTCGCGTAAACAAAGGCTCNACGGCGCGCACTGTGGGTCATATATTGATTTAACTTTGCAGAACAGAAGGTCACGTGCGCAGCGAGAGAGTATCGTCTNTNNCGGTCGCACTTTTAGNATCCATGTGTGGGGTACGGCTCTATATGTATGNCAGGATACTAAGTAAAACCGTNCCACCTGGAATCATTCGACAAAAGTGAANAAGNACANAACCAACAACAAACAACAAACACAGGGCATNTATGCGGCCCGCCTAGCTTATNCCCTTC]
[+] EMBL AL932300 [TCAGCAGAATCCCCGAGGTTAATGCTAGAAGCCAACCAACACGNGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATACACGAAGGAGCTAGAAGCGGTGCGGGGAGAACATATACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATAGCAGTACCAGAGCCAGATGGCGATAAGCAAAGCAGTAGTNGTACGTACGACCGTTTGCTGATAATTCAGATATACATCCAGCACGCTAACCATATGCAATCATATTATCCGGAATAAATCGGGCACGCACCATCTATCTAGTATTGAGCTATCGAACCAGCTACTATTTTTCCACGTTAATTTGTTGAGGTCGCGTAAACAAAGGCTCNACGGCGCGCACTGTGGGTCATATATTGATTTAACTTTGCAGAACAGAAGGTCACGTGCGCAGCGAGAGAGTATCGTCTNTNNCGGTCGCACTTTTAGNATCCATGTGTGGGGTACGGCTCTATATGTATGNCAGGATACTAAGTAAAACCGTNCCACCTGGAATCATTCGACAAAAGTGAANAAGNACANAACCAACAACAAACAACAAACACAGGGCATNTATGCGGCCCGCCTAGCTTATNCCCTTC]
consensusID : consensus_9509#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 641 fasta sequence
[AACAGAGAACCAAAAAGGACCCAAAATCCCACGATCCCTCGCACGCACGCAATTGCCCTGCTGCTGATTCAGAAACACCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGAAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATNNGGCACGCACCATCTTCTAGTTTGAGCTATCGACAAAAAAAAAANAAAAAAAAAAAAAAAACNNTGNGGCCCNNCCGGCCCAATGA]
[+] EMBL CF541663 [AACAGAGAACCAAAAAGGACCCAAAATCCCACGATCCCTCGCACGCACGCAATTGCCCTGCTGCTGGTTCAGAAACATCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGAAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAATAAATNNGGCACGCACCATCTTCTAGTTTGAGCTATCGACAAAAAAAAAANAAAAAAAAAAAAAAAACNNTGNGGCCCNNCCGGCCCAATGA]
[+] EMBL CNS08OUX [ GCGATTGCTCTGCTGCTGATTCAGAAACACCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTtaatcttag ]
[-] EMBL CNS091JS [ TGATTCAGAAACACCGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTACGACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTACCGGAATAAATCGGGCACGCACCATTTTTTAGGTTGAGCT TCGAAAAAAAAAAAAAAAAAAAA ]
consensusID : consensus_9509#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 572 fasta sequence
[CCGCCCACGCGTCCGGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCACGACCGTTGCAGATATCAGATATCATCCAGCACGCTAACCATTACAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCT]
[+] EMBL BM636093 [CCGCCCACGCGTCCGGCCCAACCTTCCTACAAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCACGACCGTTGCAGATATCAGATATCATCCAGCACGCTAACCATTACAATCATTTTCCGGAATAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTTAATTTGTTAGGTCGCGTAAACAAAGGCT]
[+] EMBL BM632027 [ ccgAAATGGACAAGGAAGTCGCCGTGCTGCAGCGTAAACTCGAAGCGGAGCTGAAAAACTTCAAGGACACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCAGCTCGATGGGCAGTACTTCGAAAACAAGAGCATTCTGGAGGAGCTGCAAATGCTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTTCGAACCTGCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCACGACCGTTGCAGATATCAGATATCATCCAGCACGCTAACCATTACAATCATTTTCCGGAATAAATCGGGC ]
consensusID : consensus_9509#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 442 fasta sequence
[CCAAGGAATCCCCCACGANGTGAATGACCCGAAAATCCACGATCCCTTCGCACGCACGCAAGTTGCGCCGTGGCAAGCTGGTTCAGAAAACATCGGCCCAAGCCCTTCCTACAAAATTGGACAAGGGAAGGTCGGCCGTGCTGCACGCGTAAACTCGGAAGCCGGAGCTGAAAAACTTCCAGGGACCAACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTTACTTCGAAAACAAGAGCATTCTGGAGGAGCTTGCAAATGCTTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGA]
[+] EMBL BX468977 [CCAAGGAATCCCCCACGANGTGAATGACCCGAAAATCCACGATCCCTTCGCACGCACGCAAGTTGCGCCGTGGCAAGCTGGTTCAGAAAACATCGGCCCAAGCCCTTCCTACAAAATTGGACAAGGGAAGGTCGGCCGTGCTGCACGCGTAAACTCGGAAGCCGGAGCTGAAAAACTTCCAGGGACCAACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCAGCTCGATGGGCAGTTACTTCGAAAACAAGAGCATTCTGGAGGAGCTTGCAAATGCTTGAAGCCAACCAACACGGTGTACAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAAGCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9509#2 -----------------AACAGAGAACCAAA--AAGGACCCAAAATCCCACGATCCCT-C 40
consensus_9509#4 -----------CCAAGGAATCCCCCACGANGTGAATGACCCGAAAATCCACGATCCCTTC 49
consensus_9509#3 ------------------------------------------------------------
consensus_9509#0 ----------CCGCGAAAACAGAGCACCAAA--AAGGACGCAAAATCCCACGATCCCT-C 47
consensus_9509#1 TCAGCAGAATCCCCGAGGTTAATGCTAGAAGCCAACCA-ACACGNGTGTACAAACTGTAC 59
consensus_9509#2 GCACGCACGCAA-TTGCCCTGCTGC----TGATTCAGAAA-CACCG-CCCAA--CCTTCC 91
consensus_9509#4 GCACGCACGCAAGTTGCGCCGTGGCAAGCTGGTTCAGAAAACATCGGCCCAAGCCCTTCC 109
consensus_9509#3 -----------------------------CCGCCCACGCG--TCCGGCCCAA--CCTTCC 27
consensus_9509#0 GCACGCACGCAA-TTGCCCTGCAGC----TGGTTCAGAAA-CATCG-CCCAA--CCTTCC 98
consensus_9509#1 GGCCCGGTGCTGGTGAAGCAGGATCTCGAGGAGAGCAAGCAAAACGTCGGCAAGCGCATC 119
** * * * *
consensus_9509#2 TACAAAAT-GGACAAGGAA--GTCG-CCGTGCTGCA-GCGTAAACTCGAAG--CGGAGCT 144
consensus_9509#4 TACAAAATTGGACAAGGGAAGGTCGGCCGTGCTGCACGCGTAAACTCGGAAGCCGGAGCT 169
consensus_9509#3 TACAAAAT-GGACAAGGAA--GTCG-CCGTGCTGCA-GCGTAAACTCGAAG--CGGAGCT 80
consensus_9509#0 TACAAAAT-GGACAAGGAA--GTCG-CCGTGCTGCA-GCGTAAACTCGAAG--CGGAGCT 151
consensus_9509#1 GAGTACATACACGAAGGAGCTAGAAGCGGTGCGGGGAGAACATATACGCAG-CTGGAAGC 178
* * ** **** * **** * * * * ** * ***
consensus_9509#2 GAAAAACTTC-AAGGAC--ACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCA 201
consensus_9509#4 GAAAAACTTCCAGGGACCAACGCAGCGAGAGTTCTCGAAGCTCGTGCAAACGCAGCAGCA 229
consensus_9509#3 GAAAAACTTC-AAGGAC--ACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCA 137
consensus_9509#0 GAAAAACTTC-AAGGAC--ACGCAGCGAGAGTTCTCGAAGCTTGTGCAAACGCAGCAGCA 208
consensus_9509#1 GAAGCAGGACAAGTACCGTGCGAACCTGCAGAAGCTGCAGATAGCAGTACCAGAGCCAGA 238
*** * * * * ** * * ** * ** * * * * *** *
consensus_9509#2 GCTCGATGGGCAGT--ACT--TCGAAAACAAGAGCATTCTGGAGGAGCT-GCAAATGCT- 255
consensus_9509#4 GCTCGATGGGCAGTT-ACT--TCGAAAACAAGAGCATTCTGGAGGAGCTTGCAAATGCTT 286
consensus_9509#3 GCTCGATGGGCAGT--ACT--TCGAAAACAAGAGCATTCTGGAGGAGCT-GCAAATGCT- 191
consensus_9509#0 GCTCGATGGGCAGT--ACT--TCGAAAACAAGAGCATTCTGGAGGAGCT-GCAAATGCT- 262
consensus_9509#1 TGGCGATAAGCAAAGCAGTAGTNGTACGTACGACCGTTTGCTGATAATTCAGATATACAT 298
**** *** * * * * * * ** * ** * * * ** *
consensus_9509#2 GAAGCCAACCAACACGGTGTA--CAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCT- 312
consensus_9509#4 GAAGCCAACCAACACGGTGTA--CAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCT- 343
consensus_9509#3 GAAGCCAACCAACACGGTGTA--CAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCT- 248
consensus_9509#0 GAAGCCAACCAACACGGTGTA--CAAACTGTACGGCCCGGTGCTGGTGAAGCAGGATCT- 319
consensus_9509#1 CCAGCACGCTAACCATATGCAATCATATTATCCGGAATAA-ATCGGGCACGCACCATCTA 357
*** * *** ** * ** * * * *** ** * *** ****
consensus_9509#2 -CGAGGA--GAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGAAGCTGAA 369
consensus_9509#4 -CGAGGA--GAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAA 400
consensus_9509#3 -CGAGGA--GAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAA 305
consensus_9509#0 -CGAGGA--GAGCAAGCAAAACGTCGGCAAGCGCATCGAGTACATCACGAAGGAGCTGAA 376
consensus_9509#1 TCTAGTATTGAGCTATCGAACCAGCTACTATTTTTCCACGTTAATT-TGTTGAGGTCGCG 416
* ** * **** * * ** * * * * * ** ** * * * *
consensus_9509#2 GCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCT 429
consensus_9509#4 GCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGA------------------ 442
consensus_9509#3 GCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCT 365
consensus_9509#0 GCGGTGCGGGGAGAACATTACGCAGCTGGAAGCGAAGCAGGACAAGTACCGTGCGAACCT 436
consensus_9509#1 TAAACAAAGGCTCNACGGCGCGCA-CTGTGGGTCATATATTGATTTAACTTTGCAGAACA 475
** ** **** *** * * *
consensus_9509#2 GCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTAC 489
consensus_9509#4 ------------------------------------------------------------
consensus_9509#3 GCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGCAC 425
consensus_9509#0 GCAGAAGCTGCAGATGCAGTACCAGAGCCAGATGGCGATAGCAAAGCAGTAGTGTCGTAC 496
consensus_9509#1 GAAGGTCACGTGCGCAGCGAGAGAGTATCGTCTNTNNCGGTCGCACTTTTAGNATC-CAT 534
consensus_9509#2 GACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAA 549
consensus_9509#4 ------------------------------------------------------------
consensus_9509#3 GACCGTT-GCAGATATCAGATATCATCCAGCACGCTAACCATTACAATCATTTTCCGGAA 484
consensus_9509#0 GACCGTTTGCTGATATCAGATATCATCCAGCACGCTAACCATTGCAATCATTTTCCGGAA 556
consensus_9509#1 GTGTGGGGTACGGCTCTATATGTATGNCAGGATACTAAGTAAAACCGTNCCACCTGGAAT 594
consensus_9509#2 TAAATNNGGCACGCACCATCTTCTAGTTTGAGCTATCGACAAAAAAAAAANAAAAAAAAA 609
consensus_9509#4 ------------------------------------------------------------
consensus_9509#3 TAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTT 544
consensus_9509#0 TAAATCGGGCACGCACCATCTTCTAGCTTGAGCTATCGAACCAGCTCTCATTTCCACGTT 616
consensus_9509#1 CATTCGACAAAAGTGAANAAGNACANAACCAACAACAAACAACAAACACAGGGCATNTAT 654
consensus_9509#2 AAAAAAACNNTGNGGCCCNNCCGGCCCAATGA---------------------------- 641
consensus_9509#4 ------------------------------------------------------------
consensus_9509#3 AATTTGTTAGGTCGCGTAAACAAAGGCT-------------------------------- 572
consensus_9509#0 AATTTGTTAGGTCGCGTAAACAAAGGCTCGAGGCGCGATGTGGGTCATATATTGATTTAA 676
consensus_9509#1 GCGGCCCGCCTAGCTTATNCCCTTC----------------------------------- 679
consensus_9509#2 ------------------------------------------------------------
consensus_9509#4 ------------------------------------------------------------
consensus_9509#3 ------------------------------------------------------------
consensus_9509#0 CTTTGCAGAAAGAAGGTCACGTGCGCACAGGGGTTCGTCTTTCGTGCATTTTGCATCCAT 736
consensus_9509#1 ------------------------------------------------------------
consensus_9509#2 ------------------------------------------------------------
consensus_9509#4 ------------------------------------------------------------
consensus_9509#3 ------------------------------------------------------------
consensus_9509#0 GTGGGGTTCGCTTTCGTTGCGAATATTAATAAAACTCCCATTGAATCATTGAAAAAGCGA 796
consensus_9509#1 ------------------------------------------------------------
consensus_9509#2 -----------------------------------------------------------
consensus_9509#4 -----------------------------------------------------------
consensus_9509#3 -----------------------------------------------------------
consensus_9509#0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGGGGGGGG 855
consensus_9509#1 -----------------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||