These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9522#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1347 fasta sequence [AACTTTGTTCCGCATCATGCGATTGTAAACTTACGGTTCAGGAGTTACCCCGTTTTGTGGAGCGTCGTGAAATGTGAAAAAT-CGTGCATAAAGTGCATTGAACTTACACAAAACCGATTCCATCTTTCCTTTCAACATTCCCG-CATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCG-GCCACGGCTTCTCCGCTTTAAGATCGTTAACCGTACTGCGGGCT-GATTATCAAGGAGGCAACGATTCCTTATCTATTCCTTATCCCGTACCACAGCCATTCGCTTGCCTCCCGTTGCACACGTAACATGGGTCTGATTGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCGGCCGAG-GAGTACCGAGCGCGGAAGGAAAAGAG-TGTGACCACTA-CGAAGAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTCGTCGGCTTTTCCGTCGTGTGGGCCTCCATCTTCCTGTACTTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAATCATCAACGGTTCCTGATGGTGGGACAGCCGTACAAGATCGTACTGAACCTGGAAATGCCCGAATCTGAACACAAT---------GGCATGTTCACCGTGTGCGGTACGGTTAAGGACTACGGGCACGTCGAGGTGGCGCGTTCCTGCCGCATGTCCATGCTGCACTACAAATCCGACCTGCTGAAAACGATTCTAACGTTCGTGTTTGCGCCACTGCTAGTATTCGGTTATCGGGAGGAGAAGCAGCTGGTAACGGTGGAGCTGTTCTCCAACTTTCTCGACGACTCGACCCATCCCGCCACCAACATCGACATCACCATCCACTGTCGGGACATTCAGCTGTACTCGGCCCAGTTACAGGTGGTCGCGAACTTTACC-GG-CTGCGGTATCTAATGTTTAACTGGCCCGTGTTGTCCGCGCTTATC-GGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGGGACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTATCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGACACGCCATCGAAAGACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGCAGAGGGGTTTATTTTTCTTTGTGGGTTTGTAATAAAGTTGTTACA] [+] EMBL CNS09A3S [AACTTTGTTCCGCATCATGCGATTGTAAACTTACGGTTCAGGAGTTACCCCGTTTTGTGGAGCGTCGTGAAATGTGAAAAAT CGTGCATAAAGTGCATTGAACTTACACAAAACCGATTCCATCTTTCCTTTCAACATTCCCGCCATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCG GCCACGGCTTCTCCGCTTTAAGATCGTTAACCGTACTGCGGGCT GATTATCAAGGAGGCAACGATTCCTTATCTATTCCTTATCCCGTACCACAGCCATTCGCTTGCCTCCCGTTGCACACGTAACATGGGTCTGATTGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCGGCCGAG GAGTACCGAGCGCGGAAGGAAAAGAG TGTGACCACTACCGAAGAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTCGTCGGCTTTTCCGTCGTGTGGGCCTCCATCTTCCTGTACTTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAATCATCAACGGTTCCTGATGGTGGGACAGCCGTACAAGATCGTACTGAACCTGGAAATGCCCGAATCTGAACACAAT GGCATGTTCACCGTGTGCGGTACGGTTAAGGACTACGGGCACGTCGAGGTGGCGCGTTCCTGCCGCATGTCCATGCTGCACTACAAATCCGACCTGCTGAAAACGATTCTAACGTTCGTGTTTGCGCCACTGCTAGTATTCGGTTATCGGGAGGAGAAGCAGCTGGTAACGGTGGA ] [+] EMBL CNS09M8Z [ TTGTTCCGCATCATGCGATTGTAAACTTACGGTTCAGGAGTTACCCCGTTTTGTGGAGCGTCGTGAAATGTGAAAAAT CGTGCATAAAGTGCATTGAACTTACACAAAACCGATTCCATCTTTCCTTTCAACATTCCCG CATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCG GCCACGGCTTCTCCGCTTTAAGATCGTTAACCGTACTGCGGGCT GATTATCAAGGAGGCAACGATTCCTTATCTATTCCTTATCCCGTACCACAGCCATTCGCTTGCCTCCCGTTGCACACGTAACATGGGTCTGATTGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCGGCCGAG GAGTACCGAGCGCGGAAGGAAAAGAG TGTGACCACTA CGAAGAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTCGTCGGCTTTTCCGTCGTGTGGGCCTCCATCTTCCTGTACTTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAATCATCAACGGTTCCTGATGGTGGGACAGCCGTACAAGATCGTACTGAACCTGGAAATGCCCGAATCTGAACACAAT GGCATGTTCACCGTGTGCGGTACGGTTAAGGACTACGGGCACGTCGAGGTGGCGCGTTCCTGCCGCATGTCCATGCTGCACTACAAATCCGACCTGCTGAAAACGATTCTAACGTTCGTGTTTGCGCCACTGCTAGTATTCGGTTATCGGGAGGAGAAGCAGCTGGTAACGGTGGAGCTGTTCTCCAACTCTCTCGACGACTCGACCCATCCCGCCACCAACATCGACATCACCATCCACTGTCGGGACATTCAGCTGTACTCGGCCCAGTTACAGGTGGTCGCGAACTTTACC GGCCTGCGGTATCTAATGTTTAACT ] [+] EMBL CNS09DST [ GTTCAGGAGTTA CCCGTTTTGTGGAGCGTCGTGAAATGTGAAAAAT CGTGCATAAAGTGCATTGAACTTACACAAAACCGATTCCATCTTTCCTTTCAACATTCCCG CATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCG GCCACGGCTTCTCCGCTTTAAGATCGTTAACCGTACTGCGGGCT GATTATCAAGGAGGCAACGATTCCTTATCTATTCCTTATCCCGTACCACAGCCATTCGCTTGCCTCCCGTTGCACACGTAACATGGGTCTGATTGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCGGCCGAGTGAGTACCGAGCGCGGAAGGAAAAGAG TGTGACCACTA CGAAGAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTCGTCGGCTTTTCCGTCGTGTGGGCCTCCATCTTCCTGTACCTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAATCATCAACGGTTCCTGATGGTGGGACAGCCGTACAAGATCGTACTGAACCTGGAAATGCCCGAATCTGAACACAATGGTAAAATAGGCATGTTCACCGTGTGCGGTACGGTTAAGGACTACGGGCACGTCGAGGTGGCGCGTTCCT ] [+] EMBL CNS09A3K [ ACCCCGTTTTGTGGAGCGTCGTGAAATGTGAAAAAT CGTGCATAAAGTGCATTGAACTTACACAAAACCGATTCCATCTTTCCTTTCAACATTCCCG CATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCGCGCCACGGCTTCTCCGCTTTAAGATCGTTAACCGTACTGCGGGCT GATTATCAAGGAGGCAACGATTCCTTATCTATTCCTTATCCCGTACCACAGCCATTCGCTT ] [+] EMBL CNS09D1P [ CGTCGTGAAATGTGAAAAAT CGTGCATAAAGTGCATTGAACTTACACAAAACCGATTCCATCTTTCCTTTCAACATTCCCG CATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCG GCCACGGCTTCTCCGCTTTAAGATCGTTAA CGTACTGCGGGCT GATTATCAAGGAGGCAACGACTCCTTATCTATTCCTTATCCCGTACCACAGCCATTCGCTTGCCTCCCGTTGCACACGTAACATGGGTCTGATTGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCGGCCGAG GAGTACCGAGCGCGGAAGGAAAAGAGCTGTGACCACTA CGAAGAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTCGTCGGCTTTTCCGTCGTGTGGGCCTCCATCTTCCTGTACCTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATG ] [+] EMBL CNS09ADU [ AATGTGAAAAATACGTGCATAAAGTGCATTGAACTTACACAAAACCGATTCCATCTTTCCTTTCAACATTCCCG CATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCG GCCACGGCTTCTCCGCTTTAAGATCGTTAATCGTACTGCGGGCTAGATTATCAAGGAGGCAACGATTCCTTATCTATTCCTTATCCCGTACCACAGCCATTCGCTTGCCTCCCGTTGCACACGTAACATGGGTCTGATTGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCGG CGAG GAGTACCGAGCGCGGAAGGAAAAGAG TGTGACCACTA CGAAGAACGTGTTCCTGAAGCTGC ] [-] EMBL CNS09M90 [ TGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAACCGGGTTCTACGCTGGGCCTGGCCGCGGCCGAG GAGTACCGAGCGCGGAAGGAAAAGAG TGTGACCACTA CGAAGAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTCGTCGGCTTTTCCGTCGTGTGGGCCTCCATCTTCCTGTACTTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAATCATCAACGGTTCCTGATGGTGGGACAGCCGTACAAGATCGTACTGAACCTGGAAATGCCCGAATCTGAACACAAT GGCATGTTCACCGTGTGCGGTACGGTTAAGGACTACGGGCACGTCGAGGTGGCGCGTTCCTGCCGCATGTCCATGCTGCACTACAAATCCGACCTGCTGAAAACGATTCTAACGTTCGTGTTTGCGCCACTGCTAGTATTCGGTTATCGGGAGGAGAAGCAGCTGGTAACGGTGGAGCTGTTCTCCAACTCTCTCGACGACTCGACCCATCCCGCCACCAACATCGACATCACCATCCACTGTCGGGACATTCAGCTGTACTCGGCCCAGTTACAGGTGGTCGCGAACTTTACC GG CTGCGGTATCTAATGTTTAACTGGCCCGTGTTGTCCGCGCTTATC GGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGGGACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTATCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGACACGCCATCGAAAGACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGCAGAGGGGTTTATTTTTCTTTGTGGGTTTGTAAT ] [-] EMBL CNS09A3T [ TTCCGTCGTGTGGGCCTCCATCTTCCTGTACTTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAATCATCAACGGTTCCTGATGGTGGGACAGCCGTACAAGATCGTACTGAACCTGGAAATGCCCGAATCTGAACACAAT GGCATGTTCACCGTGTGCGGTACGGTTAAGGACTACGGGCACGTCGAGGTGGCGCGTTCCTGCCGCATGTCCATGCTGCACTACAAATCCGACCTGCTGAAAACGATTCTAACGTTCGTGTTTGCGCCACTGCTAGTATTCGGTTATCGGGAGGAGAAGCAGCTGGTAACGGTGGAGCTGTTCTCCAACTTTCTCGACGACTCGACCCATCCCGCCACCAACATCGACATCACAATCCACTGTCGGGACATTCAGCTGTACTCGGCCCAGTTACAGGTGGTCGCGAACTTTACC GG CTGCGGTATCTAATGTTTAACTGGCCCGTGTTGTCCGCGCTTATC GGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGGGACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTATCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGACACGCCATCGAAAGACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGCAGAGGGGTTTATTTTTCTTTGTGGGTTTGTAATtttgt ] [-] EMBL CNS09D1Q [ CGCATGTCCATGCTGCACTACAAATCCGACCTGCTGAAAACGATTCTAACGTTCGTGTTTGCGCCACTGCTAGTATTCGGTTATCGGGAGGAGAAGCAGCTGGTAACGGTGGAGCTGTTCTCCAACTTTCTCGACGACTCGACCCATCCCGCCACCAACATCGACATCACCATCCACTGTCGGGACATTCAGCTGTACTCGGCCCAGTTACAGGTGGTCGCGAACTTTACC GG CTGCGGTATCTAATGTTTAACTGGCCCGTGTTGTCCGCGCTTATC GGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGGGACGATACGGAGTGGATATC GACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTATCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGACACGCCATCGAAAGACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGCAGAGGGGTTTATTTTTCTTTGTGGGTTTGTAATACATCTGTTACA] [-] EMBL CNS09DSU [ tCGAGTCAATTGTTCGTGTTTGCGCCACTGCTAGTATTCGGTTATCGGGAGGAGAAGCAGCTGGTAACGGTGGAGCTGTTCTCCAACTTTCTCGACGACTCGACCCATCCCGCCACCAACATAGACATCACCATCCACTGTCGGGACATTCAGCTGTACTCGGCCCAGTTACAGGTGGTCGCGAACTTTACC GG CTGCGGTATCTAATGTTTAACTGGCCCGTGTTGTCCGCGCTTATC GGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGGGACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTATCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGACACGCCATCGAAAGACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGCAGAGGGGTTTATTTTTCTTTGTGGGTTTGTAATAACCGTGTT ] [-] EMBL CNS09A3L [ AGCTGGTAACGGTGGAGCTGTTCTCCAACTTTCTCGACGACTCGACCCATCCCGCCACCAACATCGACATCACAATCAACTGTCGGGACATTCAGCTGTACTCGGCCCAGTTACAGGTGGTCGCGAACTTTACC GG CTGCGGTATCTAATGTTTAACTGGCCCGTGTTGTCCGCGCTTATC GGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGGGACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTATCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGACACGCCATCGAAAGACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGCAGAGGGGTTTATTTTTCTTTGTGGGTTTGTAATAAAGTg ] [-] EMBL CNS09ADV [ aACATTCAGCTGTACTCGGCCCAGTTACAGGTGGTCGCGAACTTTACCGGG CTGCGGTATCTAATGTTTAACTGGCCCGTGTTGTCCGCGCTTATCGGGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGGGACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTATCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGACACGCCATCGAAAGACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGCAGAGGGGTTTATTTTTCTTTGT ] consensusID : consensus_9522#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1033 fasta sequence [CGGAGTTACCCCGTTTTGTGGAGCGTCGTGAATTGTGAAAAATCGTGCAAAACGTGCATTTAACTTACACAAAACCGATTCTATCTTTCCTTTCAACATTCCCGCATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCGGCCACGGCTTCTCCTCTTTAAGATCGTTAACCGTACTGCAGGCTGATTATCAAGGAGGCAACGATTCCTTATCTGTTCCTTATCCCGTGCCACAGCCATTCGCTTGCCTCCCGTTGCACACGTAACATGGGTCTGATAGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAA-CCGGTCGCTACGCTGGGCCTGGCCGCTGCCGAGGAGTACCGAGCGCGGAAGGAAAAGAGTGTGACCACTACGAAAAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTGGTCGGCTTTTCTGTCGTGTGGGCCTCCATCTTCCTGTACCTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAATCATCAACGGTT-TTTATGGTGGGACAGCCGTACAAGATCGTACTGAACCTGGAAATGCCCGAATCTGAACACAATGGTAAAATAGGCATGTTCACCGTGTGCGGCCTGCGATATCTAATGTTTAACTGGCCCGTGCTGTCCGCGCTTATCGGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGGGACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTATCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGACACGCCATCGAAAAACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGAAAAATGGGGAGTATTTTCTGATGGGTTTGTAATAAAG] [+] EMBL CNS08UT3 [CGGAGTTACCCCGTTTTGTGGAGCGTCGTGAATTGTGAAAAATCGTGCAAAACGTGCATTTAACTTACACAAAACCGATTCTATCTTTCCTTTCAACATTCCCGCATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCGGCCACGGCTTCTCCTCTTTAAGATCGTTAACCGTACTGCAGGCTGATTATCAAGGAGGCAACGATTCCTTATCTGTTCCTTATCCCGTGCCACAGCCATTCGCTTGCCTCCCGTTGCACACGTAACATGGGTCTGATAGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAA CCGGTCGCTACGCTGGGCCTGGCCGCTGCCGAGGAGTACCGAGCGCGGAAGGAAAAGAGTGTGACCACTACGAAAAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTGGTCGGCTTTTCTGTCGTGTGGGCCTCCATCTTCCTGTACCTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAATCATCAACGGTT TTTATGGTGGGACAGCCGTACAAGATCGTACTGAACCTGGAAATGCCCGAATCTGAACACAATGGTAAAATAGGCATGTTCACCGTGTGCGGCCTGCGATATCTAATGTTTAACTGGCCCGTGCTGTCCGCGCTTATCGGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGGGACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTATCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGACACGCCA ] [-] EMBL CNS08UT4 [ TTAAGATCGTTAACCGTACTGCAGGCTGATTATCAAGGAGGCAACGATTCCTTATCTGTTCCTTATCCCGTGCAACAGCCATTCGCTTGCCTCCCCTTGCACACGTAACATGGGTCTGATAGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAACCCGGGGTCTCCGCTGGGCCTGGCCGCTGCCGAGGAGTACCGAGCAAAAAAGGAAAAGAGTGTGACCACTACGAAAAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTGGTCGGCTTTTCTGTCGTGTGGGCCTCCATCTTCCTGTACCTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAATCATCAACGGTTCCTGATGGTGGGACAGCCGTACAAGATCGTACTGAACCTGGAAATGCCCGAATCTGAACACAATGGTAAAATAGGCATGTTCACCGTGTGCGGCCTGCGATATCTAATGTTTAACTGGCCCGTGCTGTCCGCGCTTATCGGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGGGACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTATCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGACACGCCATCGAAAAACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGAAAAATGGGGAGTATTTTCTGATGGGTTTGTAATAAAG] consensusID : consensus_9522#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 829 fasta sequence [CAGAATCGCCACGAGGGTTACCCCGTTTTGTGGAGCGTCGTGAAATGTGAAAAATCGTGCAAAACGTGCATTGAACTTACACAAAACCGATTCTATCTTTCCTTTCAACATTCCCGTATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCGGCCACGGCTTCTCCTCTTTAAGATCGTTAACCGTACTGCGGGCTCTGATTATCAAGGAGGCAACGATTCCTTATCTGTTCCTTATCCCGTGCCACAGCCATTCGCTTGCCTCCCGTTGCACACGTAACATGGGTCTGCTAGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCTGCCGAGGAGTACCGAGCGCGGAAGGAAAAGAGTGTGACCACTACAAAGAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTGGTCGGCTTTTCCGTCGTGTGGGCCTCCATCTTCCTGTACCTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAAATCATCAACGGTTCCTGATGGTGGGACAGCGTACAAGATCGTTACTGAACCTGGAAATGCCCGAATTCTGAAACACGCAATGGCATGTTCACCGTGTGCCGGTACGGGTAAAGGACTACGGGGCACCGTTCGGAGGTTGGACGGCACGTTCCTTGCCGGATGTCCCATTGTTGCATTGACAATTCCGGAACNTGCTGAA] [+] EMBL BX467650 [CAGAATCGCCACGAGGGTTACCCCGTTTTGTGGAGCGTCGTGAAATGTGAAAAATCGTGCAAAACGTGCATTGAACTTACACAAAACCGATTCTATCTTTCCTTTCAACATTCCCGTATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGCTTGCGGCCACGGCTTCTCCTCTTTAAGATCGTTAACCGTACTGCGGGCTCTGATTATCAAGGAGGCAACGATTCCTTATCTGTTCCTTATCCCGTGCCACAGCCATTCGCTTGCCTCCCGTTGCACACGTAACATGGGTCTGCTAGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAATCGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCTGCCGAGGAGTACCGAGCGCGGAAGGAAAAGAGTGTGACCACTACAAAGAACGTGTTCCTGAAGCTGCTCGTCGTCGTGCTGGTCGGCTTTTCCGTCGTGTGGGCCTCCATCTTCCTGTACCTGTACTTCTACTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATGTCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAAATCATCAACGGTTCCTGATGGTGGGACAGCGTACAAGATCGTTACTGAACCTGGAAATGCCCGAATTCTGAAACACGCAATGGCATGTTCACCGTGTGCCGGTACGGGTAAAGGACTACGGGGCACCGTTCGGAGGTTGGACGGCACGTTCCTTGCCGGATGTCCCATTGTTGCATTGACAATTCCGGAACNTGCTGAA] consensusID : consensus_9522#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 100 fasta sequence [CTCCATTGCCGCCTTGACCTTCGATCCGCCCTTCCCGATTTGCTGATCCCTGTCCCGGCTGTCCGATCTCCACTCCGTCTCGTCCCAGTGGTACCAGCTC] [+] EMBL CNS09AXP [CTCCATTGCCGCCTTGACCTTCGATCCGCCCTTCCCGATTTGCTGATCCCTGTCCCGGCTGTCCGATCTCCACTCCGTCTCGTCCCAGTGGTACCAGCTC] consensusID : consensus_9522#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 89 fasta sequence [GCCGCTGCTCGTCGTCGTGCTCGTCGGCTTTTCCGTCGTGTGGGCCTCCCTCTTCCTGTCCCTGTCCTTCTTCTTCTCCTTCCTGCCCT] [+] EMBL CNS09AXO [GCCGCTGCTCGTCGTCGTGCTCGTCGGCTTTTCCGTCGTGTGGGCCTCCCTCTTCCTGTCCCTGTCCTTCTTCTTCTCCTTCCTGCCCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9522#0 AACTTTGTTCCGCATCATGCGATTGTAAACTTACGGTTCAGGAGTTACCCCGTTTTGTGG 60 consensus_9522#1 ---------------------------------------CGGAGTTACCCCGTTTTGTGG 21 consensus_9522#2 ---------------------------CAGAATCGCCACGAGGGTTACCCCGTTTTGTGG 33 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 AGCGTCGTGAAATGTGAAAAATCGTGCATAAAGTGCATTGAACTTACACAAAACCGATTC 120 consensus_9522#1 AGCGTCGTGAATTGTGAAAAATCGTGCAAAACGTGCATTTAACTTACACAAAACCGATTC 81 consensus_9522#2 AGCGTCGTGAAATGTGAAAAATCGTGCAAAACGTGCATTGAACTTACACAAAACCGATTC 93 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 CATCTTTCCTTTCAACATTCCCGCATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGC 180 consensus_9522#1 TATCTTTCCTTTCAACATTCCCGCATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGC 141 consensus_9522#2 TATCTTTCCTTTCAACATTCCCGTATAAAGACCATTCCGGTGGCGGAAGTTGTGATGTGC 153 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 TTGCGGCCACGGCTTCTCCGCTTTAAGATCGTTAACCGTACTGCGGGCT--GATTATCAA 238 consensus_9522#1 TTGCGGCCACGGCTTCTCCTCTTTAAGATCGTTAACCGTACTGCAGGCT--GATTATCAA 199 consensus_9522#2 TTGCGGCCACGGCTTCTCCTCTTTAAGATCGTTAACCGTACTGCGGGCTCTGATTATCAA 213 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 GGAGGCAACGATTCCTTATCTATTCCTTATCCCGTACCACAGCCATTCGCTTGCCTCCCG 298 consensus_9522#1 GGAGGCAACGATTCCTTATCTGTTCCTTATCCCGTGCCACAGCCATTCGCTTGCCTCCCG 259 consensus_9522#2 GGAGGCAACGATTCCTTATCTGTTCCTTATCCCGTGCCACAGCCATTCGCTTGCCTCCCG 273 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 TTGCACACGTAACATGGGTCTGATTGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAAT 358 consensus_9522#1 TTGCACACGTAACATGGGTCTGATAGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAAT 319 consensus_9522#2 TTGCACACGTAACATGGGTCTGCTAGGTTTGGTGTTGATGATTTTGGACCCTTTCAAAAT 333 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 CGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCGGCCGAGGAGTA 418 consensus_9522#1 CGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCTGCCGAGGAGTA 379 consensus_9522#2 CGTACGAAACTATGTATTCAAACCGGTCGCTACGCTGGGCCTGGCCGCTGCCGAGGAGTA 393 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 CCGAGCGCGGAAGGAAAAGAGTGTGACCACTACGAAGAACGTGTTCCTGAAGCTGCTCGT 478 consensus_9522#1 CCGAGCGCGGAAGGAAAAGAGTGTGACCACTACGAAAAACGTGTTCCTGAAGCTGCTCGT 439 consensus_9522#2 CCGAGCGCGGAAGGAAAAGAGTGTGACCACTACAAAGAACGTGTTCCTGAAGCTGCTCGT 453 consensus_9522#4 ------------------------------------------------GCCGCTGCTCGT 12 consensus_9522#3 ------------------------------------------------------CTCCAT 6 * * consensus_9522#0 CGTCGTGCTCGTCGGCTTTTCCGTCGTGTGGGCCTCCATCTTCCTGTACTTGTACTTCTA 538 consensus_9522#1 CGTCGTGCTGGTCGGCTTTTCTGTCGTGTGGGCCTCCATCTTCCTGTACCTGTACTTCTA 499 consensus_9522#2 CGTCGTGCTGGTCGGCTTTTCCGTCGTGTGGGCCTCCATCTTCCTGTACCTGTACTTCTA 513 consensus_9522#4 CGTCGTGCTCGTCGGCTTTTCCGTCGTGTGGGCCTCCCTCTTCCTGTCCCTGTCCTTCTT 72 consensus_9522#3 TGCCGCCTTGACCTTCGATCCGCCCTTCCCGATTTGCTGATCCCTGTCCCGGCTGTCCGA 66 * ** * * * * * * * * * * * ***** * * * * consensus_9522#0 CTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATG 598 consensus_9522#1 CTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATG 559 consensus_9522#2 CTACTCCTACATGCCCTCCGTTTTGCACGTGAAGGATGTGCACCTGAACATACGCGAATG 573 consensus_9522#4 CTTCTCCTTCCTGCCCT------------------------------------------- 89 consensus_9522#3 TCTCCACTCCGTCTCGTCCCAGTGGTACCAGCTC-------------------------- 100 * ** * * * * consensus_9522#0 TCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAA-TC 657 consensus_9522#1 TCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAA-TC 618 consensus_9522#2 TCAAGATAATGCGTACGATTGCAAACCTTATCCGACGGCGAACGTTGCGCTGACTAAATC 633 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 ATCAACGGTTCCTGATGGTGGGACAGCCGTACAAGATCGT-ACTGAACCTGGAAATGCCC 716 consensus_9522#1 ATCAACGGTTTTT-ATGGTGGGACAGCCGTACAAGATCGT-ACTGAACCTGGAAATGCCC 676 consensus_9522#2 ATCAACGGTTCCTGATGGTGGGACAGC-GTACAAGATCGTTACTGAACCTGGAAATGCCC 692 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 GAAT-CTGAA---CACAATGGCATGTTCACCGTGTGCGGTACGGTTAAGGACTACGGGCA 772 consensus_9522#1 GAAT-CTGAA---CACAATGGTA------------------------------------- 695 consensus_9522#2 GAATTCTGAAACACGCAATGGCATGTTCACCGTGTGCCGGTACGGGTAAAGGACTACGGG 752 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 CGTCGAGGTGGCGCGTTCCTGCCGCATGTCCATGCTGCACTACAAATCCGACCTGCTGAA 832 consensus_9522#1 -----AAATAG------------GCATGTTCA---------------------------- 710 consensus_9522#2 GCACCGTTCGGAGG--TTGGACGGCACGTTCCTTGCCGGATGTCCCATTGTTGCATTGAC 810 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 AACGATTCTAACGTTCGTGTTTGCGCCACTGCTAGTATTCGGTTATCGGGAGGAGAAGCA 892 consensus_9522#1 ------------------------------------------------------------ consensus_9522#2 AATTCCGGAACNTGCTGAA----------------------------------------- 829 consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 GCTGGTAACGGTGGAGCTGTTCTCCAACTTTCTCGACGACTCGACCCATCCCGCCACCAA 952 consensus_9522#1 ------------------------------------------------------------ consensus_9522#2 ------------------------------------------------------------ consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 CATCGACATCACCATCCACTGTCGGGACATTCAGCTGTACTCGGCCCAGTTACAGGTGGT 1012 consensus_9522#1 ----------------------------------CCGTGTGCGGCC-------------- 722 consensus_9522#2 ------------------------------------------------------------ consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 CGCGAACTTTACCGGCTGCGGTATCTAATGTTTAACTGGCCCGTGTTGTCCGCGCTTATC 1072 consensus_9522#1 ----------------TGCGATATCTAATGTTTAACTGGCCCGTGCTGTCCGCGCTTATC 766 consensus_9522#2 ------------------------------------------------------------ consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 GGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGG 1132 consensus_9522#1 GGCATCACCACGAATCTATTTTTCATTCTAATCGTCTGCGTACTGAGCTGGTACCACTGG 826 consensus_9522#2 ------------------------------------------------------------ consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 GACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTA 1192 consensus_9522#1 GACGATACGGAGTGGATATCGGACATCCGGGACAGGTATCAGCAAATCGTGAAGGGCGTA 886 consensus_9522#2 ------------------------------------------------------------ consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 TCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGAC 1252 consensus_9522#1 TCGAAGGTCAATGCTGCAATGGAGCAAACGAAAGCGGTCAACCCGCTCAAGGACACCGAC 946 consensus_9522#2 ------------------------------------------------------------ consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 ACGCCATCGAAAGACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGCAGAGGGGTTT 1312 consensus_9522#1 ACGCCATCGAAAAACTGGCTTCTAGACGAGGAGTGATATTGGTATGGAGAAAAATGGGGA 1006 consensus_9522#2 ------------------------------------------------------------ consensus_9522#4 ------------------------------------------------------------ consensus_9522#3 ------------------------------------------------------------ consensus_9522#0 ATTTTTCTTTGTGGGTTTGTAATAAAGTTGTTACA 1347 consensus_9522#1 GTATTTTCTGATGGGTTTGTAATAAAG-------- 1033 consensus_9522#2 ----------------------------------- consensus_9522#4 ----------------------------------- consensus_9522#3 ----------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||