These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9544#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1458 fasta sequence [AAAGAAATCCTTTGTTGAGGAGATGAACTGATACAAACCGCCACCCAGATAAGCGATCCCGCAACAGGCGCAGAAAATCTGAAGTGAAACTCCTTCAGCCCAGCATCACCACCAGCAGGACAATCGGTAACACTCTCCGCCGTTTTTTAATGCTCTAGGACGTCTGTTTCTCTGCAGCCGATATCGGAGCCGAAACAAATCTTCATCAAGCACTCCTTCCTGCAGCTTCTGGTCGGCCATTTTACCACCTCCCAGTGCAAAGGTGGACTCGAACATGCGTCGCCAAGGCAGAAGCGCGCCGGCAGAAGGGCCCAGAAATGAGGAGAAGAAAAAATCTAGTCGTTGTTTTTGTTGAATGTGTTTATTTTTGAGGTACTATAAAACAAAGTAGTGTTAGACGTTAGTAATGAAAGCTGCAGCAGTAACGGCTGCAGAAGATAGGCGGTACGATGGTGATCGTTCGATCGTAGTGCG-T-TACTGGCATGGCTGCTC-TTGTGTAGAGAGCCTGGTGTTTGCCCATGGCAACGGATCGACAATGCATGCGCACACCATTCAATTACGATGTACTCCCATAACCAGACTCTGTAATATAGACTGAACAGTAGTAGATGGTTGGCAGCAGTTGACAGCTTTTAGATCGTATAG-TTTTTTTTTCGCAATAATTAAACTCTAGTTTGAGCGTTCATGTTCGTTGCGTTTACAGTTTGAATAATAAGTTCTCAGCCTAAGCGAGTTAGTTTTGCTAAGCTTTTTGTTTGCGTTTCATCCAAACCACCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATATCGGTTCGTATTTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTTTTTGTTTTAATTTTACCATTCGTTTGTGTACAGTATGCTTGCGTTAGTTTGTG-TTTTTTGTAACATATTTTATGATATTCGATGGGTTGGCTGGTAAATGTCGTCCTTCCCACGGGAAGGACAGTCCGATGGCTAGTAGTTCTTTGTGCTATTCTATATACGACTATAACGGTTGAAACAAAATAAGCAGCTATTTAACGTGGCGAGCCATGCAAGCGAGCAATG-A-TCCGTCAACCGACCCGGTCGGTATTA--TCGGTCATGGTGCTTTTGAATCGATTTTGTGCCTTCAGCATCGATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCGAAACGGGAACTGGTAAACCATCAGTACCAGCTACCTGCGTTCCACCGGTACGCAGTGCGAACTTGTGAGCTTCCAGGGTATTATTTAAACGTGTTACTACAAACTCATATGTATGTCCCACATTAATCAATTGTTCAGGTTTTGTATAAAGTGAACATGTAGAAACAGTGAGTGAGTTGGAAAGCGAGAAAGTGAAGAAATATTGAGTGAGAAGCGGAGAAAAGAAAGAAAAGAATAAACAAATATACGCCGTAGTTG] [+] EMBL CNS08K18 [AAAGAAATCCTTTGTTGAGGAGATGAACTGATACAAACCGCCACCCAGATAAGCGATCCCGCAACAGGCGCAGAAAATCTGAAGTGAAACTCCTTCAGCCCAGCATCACCACCAGCAGGACAATCGGTAACACTCTCCGCCGTTTTTTAATGCTCTAGGACGTCTGTTTCTCTGCAGCCGATATCGGAGCCGAAACAAATCTTCATCAAGCACTCCTTCCTGCAGCTTCTGGTCGGCCATTTTACCACCTCCCAGTGCAAAGGTGGACTCGAACATGCGTCGCCAAGGCAGAAGCGCGCCGGCAGAAGGGCCCAGAAATGAGGAGAAGAAAAAATCTAGTCGTTGTTTTTGTTGAATGTGTTTATTTTTGAGGTACTATAAAACAAAGTAGTGTTAGACGTTAGTAATGAAAGCTGCAGCAGTAACGGCTGCAGAAGATAGGCGTTACGATGGTGATCGTTCGATCGTAGTGCGATATACTG ] [+] EMBL BX626490 [ AGAAGAAAAAATCTAGTCGTTGTTTTTGTTGAATGTGTTTATTTTTGAGGTACTATAAAACAAAGTAGTGTTAGACGTTAGCAATGAAAGCTGCAGCAGTAACGGCTGCAGAAGATAGGCGGTACGATGGTGATCGTTCGATCGTAGTGCG T TACTGGCATGGCTGCTCTTTGTGTAGAGAGCCTGGTGTTTGCCCATGGCAACGGATCGACAATGCATGCGCACACCATTCAATTACGATGTACTCCCATAACCAGACTCTGTAATATAGACTGAACAGTAGTAGATGGTTGGCAGCAGTTGACAGCTTTTAGATCGTATAG TTTTTTTTTCGCAATAATTAAACTCTAGTTTGAGCGTTCATGTTCGTTGCGTTTACAGTTTGAATAATAAGTTCTCAGCCTAAGCGAGTTAGTTTTGCTAAGCTTTTTGTTTGCGTTTCATCCAAACCACCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATATCGGTTCGTATTTTGTATAATTTTGCCCCTTTCGGTATGATTGTGAGTTGCTTTTAGAGTTTTTGTTTTAATTTTACCATTCGTTTGTGTACAG ] [+] EMBL BX613604 [ CAGAAGATAGGCGGTACGATGGTGATTTTTCGATCGTAGTGCG T TACTGGCATGGCTGCTC TTGTGTAGAGAGCCTGGTGTTTGCCCATGGCAACGGATCGACAATGCATGCGCACACCATTCAATTACGATGTACTCCCATAACCAGACTCTGTAATATAGACTGAACAGTAGTAGATGGTTGGCAGCAGTTGACAGCTTTTAGATCGTATAGTTTTTTTTTTCGCAATAATTAAACTCTAGTTTGAGCGTTCATGTTCGTTGCGTTTACAGTTTGAATAATAAGTTCTCAGCCTAAGCGAGTTAGTTTTGCTAAGCTTTTTGTTTGCGTTTCATCCAAACCACCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATATCGGTTCGTATTTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTTTTTGTTTTAATTTTACCATTCGTTTGTGTACAGTATGCTTGCGTTAGTTTGTG TTTTTGTAACATATTTTATGATATTCGATGGGTTGGCTGGTAAATGTCGTCCTTCCCACGGGAAGGACAGTCCGATGGCTAGTAGTTCTTTGTGCTATTCTATATACGACTATAACGGTTGAAACAAAATAAGCAGCTATTTAACGTGGCGAGCCATGCAAGCGAGCAATG A TCCGTCAACCGACCCGGTCGGTATTA TCGGTCATGGTGCTTTTGAATCGATTTTGTGCCTTCAGCATCGATTGAAGGATCGATCCTTAGTACGTTC ] [+] EMBL BX618959 [ GACTGAACAGTAGTAGATGGTTGGCAGCAGTTGACAGCTTTTAGATCGTATAG TTTTTTTTTCGCAATAATTAAACTCTAGTTTGAGCGTTCATGTTCGTTGCGTTTACAGTTTGAATAATAAGTTCTCAGCCTAAGCGAGTTAGTTTTGCTAAGCTTTTTGTTTGCGTTTCATCCAAACCACCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATATCGGTTCGTATTTTGTATAATTTTGCCCCTTTCGGTATGATTGTGAGTTGCTTTTAGAGTTTTTGTTTTAATTTTACCATTCGTTTGTGTACAGTATGCTTGCGTTAGTTTGTG TTTTTTGTAACATATTTTATGATATCCGATGGGTTGGCTGGTAAATGTCGTCCTTCCCACGGGAAGGACAGTC ] [+] EMBL CNS09HJJ [ GTAGTAGATGGTTGGCAGCAGTTGACAGCTTTTAGATCGTATAG TTTTTTTTTCGCAATAATTAAACTCTAGTTTGAGCGTTCATGTTCGTTGCGTTTACAGTTTGAATAATAAGTTCTCAG ] [+] EMBL BX610030 [ TAAACTCTAGTTTGAGCGTTCATGTTCGTTGCGTTTACAGTTTGAATAATAAGTTCTCAGCCTAAGCGAGTTAGTTTTGCTAAGCTTTTTGTTTGCGTTTCATCCAAACCACCTACGGAAGAGCTTCAGTTTGCA ] [+] EMBL BM636570 [ ccgGTTCGTTGCGTTTACAGTTTGAATGATAAGTTCTCAGCCTAAGCGAGTTAGTTTTGCTAAGCTTTTTGTTTGCCTTTCATCCAAACTGCCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATATCGGTTCGTATTTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTTTTTGTTTTAATTTTACCATTCGTTTGTGTACAGTATGCTTGCGTTAGTTTGTGTTTTTTTGTAACATATTTTATGATATCCGATGGGTTGGCTGGTAAATGTCGTCCTTCCCACGGGAAGGACAGTCCGATGGCTAGTAGTTCTTTGTGCTATTCTATATACGACTATAACGGTTGAAACAAAATAAGCAGCTATTTAACGTGGCGAGCCATGCAAGCGAGCAATG A TCCGTCAACCGACCCGGTCGGTATTA TCGGTCATGGTGCTTTTGAATCGATTTTGTGCCTTCAGTATCGATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCGAAACGGGAACTGGTAAACCATCAGTACCAGCTACCTGCGTTCCACCGGTACGCAGTGCGAACTTGTGAGCTTCCAGGGTATTATTTAAAC ] [+] EMBL BM652294 [ ccgGTTCGTTGCGTTTACAGTTTGAATGATAAGTTCTCAGCCTAAGCGAGTTAGTTTTGCTAAGCTTTTTGTTTGCCTTTCATCCAAACTGCCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATATCGGTTCGTATTTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTTTTTGTTTTAATTTTACCATTCGTTTGTGTACAGTATGCTTGCGTTAGTTTGTGTTTTTTTGTAACATATTTTATGATATCCGATGGGTTGGCTGGTAAATGTCGTCCTTCCCACGGGAAGGACAGTCCGATGGCTAGTAGTTCTTTGTGCTATTCTATATACGACTATAACGGTTGAAACAAAATAAGCAGCTATTTAACGTGGCGAGCCATGCAAGCGAGCAATG A TCCGTCAACCGACCCGGGCGGTATTA TCGGTCATGGTGCTTTTGAATCGAT ] [+] EMBL BX614370 [ TGCAGTTAGTAAATATCGGTTCGTATTTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGATTTTTTTTTTTAATTTTACCATTCGTTTGTGTACAGTATGCTTGCGTTAGTTTGTG TTTTTGTAACATATTTTATGATATTCGATGGGTTGGCTGGTAAATGTCGTCCTTCCCACGGGAAGGACAGTCCGATGGCTAGTAGTTCTTTGTGCTATTCTATATACGACTATAACGGTTGAAACAAAATAAGCAGCTATTTAACGTGGCGAGCCATGCAAGCGAGCAATG A TCCGTCAACCGACCCGGTCGGTATTA TCGGTCATGGTGCTTTTGAATCGATTTTGTGCCTTCAGCATCGATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCGAAACGGGAACTGGTAAACCATCAGTACCAGCTACCTGCGTTCCACCGGTACGCAGTGCGAACTTGTGAGCTTCCATGGTATTATTTAAACGTGTTACTACAAACTCATATGTATG ] [-] EMBL CNS09HJK [ TTAGAGTTTTTGTTTTAATTTTACCATTCGTTTGTGTACAGTATGCTTGCGTTAGTTTGTG TTTTTGTAACATATTTTATGATATCCGATGGGTTGGCTGGTAAATGTCGTCCTTCCCACGGGAAGGACAGTCCGATGGCTAGTAGTTCTTTGTGCTACTCTATATACGACTAAAACGGTTGAAACAAAATAAGCAGCTATTTAACGTGGCGAGCCATGCAAGCGAGCAATG A TCCGTCAACCGACCCGGTCGGTATAA TCGGTCATGGTGCTTTTGAATCGATTTTGTGCCTTCAGCATCGATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCGAAACGGGAACTGGTAAACGATCAGTACCAGCTACCTGCGTTCCACCGGTACGCAGTGCAAACTTGTGAGCTTCCAGGGTATTATTTAAACGTGTTACTACAAACTCATATGTATGTCCCACATTAATCAATTGTTCAGGTTTTGTATAAAGTGAACATGTAGAAACAGTGAGTGAGTTGGAAAGCGAGAAAGTGAAGAAAGATTGAGTGAGAAGCGGAGAAAAGAAAGAAAAGAATAAACAAATATA ] [+] EMBL BX628677 [ ctGTTTTTTTTTT TTTTTTGTAACATATTTTATGATATTCGATGGGTTGGCTGGTAAATGTCGTCCTTCCCACGGGAAGGACAGTCCGATGGCTAGTAGTTCTTTGTGCTATTCTATATACGACTATAACGGTTGAAACAAAATAAGCAGCTATTTAACGTGGCGAGCCATGCAAGCGAGCAATG A TCCGTCAACCGACCCGGTCGGTATTA TCGGTCATGGTGCTTTTGAATCGATTTTGTGCCTTCAGCATCGATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCGAAACGGGAACTGGTAAACCATCAGTACCAGCTACCTGCGTTCCACCGGTACGCAGTGCGAACTTGTGAGCTTCCAGGGTATTATTTAAACGTGTTACTACAAACTCATATGTATGTCCCACATTAATCAATTGTTCAGGTTTTGTATAAAGTGAACATGTAGAAACAGTGAGTGAGTTGGAAAGCGAGAAAGTGAAGAAATATTGAGT ] [+] EMBL BX622887 [ TGATATTCGATGGGTTGGCTGGTAAATGTCGTCCTTCCCACGGGAAGGACAGTCCGATGGCTAGTAGTTCTTTGTGCTATTCTATATACGACTATAACGGTTGAAACAAAATAAGCAGCTATTTAACGTGGCGAGCCATGCAAGCGAGCAATG A TCCGTCAACCGACCCGGTCGGTATTA TCGGTCATGGTGCTTTTGAATCGATTTTGTGCCTTCAGCATCGATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCGAAACGGGAACTGGTAAACCATCAGTACCAGCTACCTGCGTTCCACCGGTACGCAGTGCGAACTTGTGAGCTTCCAGGGTATTATTTAAACGTGTTACTACAAACTCATATGTATGTCCCACATTAATCAATTGTTCAGGTTTTGTATAAAGTGAACATGTAGAAACAGTGAGTGAGTTGGAAAGCGAGAAAGTGAAGAAATATTGAGT ] [-] EMBL BM631804 [ GGACAGTCCGATGGCTAGTAGTTCTTTGTGCTATTCTATATACGCCTATAACGGTTGAAACAAAATAAGCAGCTATTTAACGTGGCGAGCCATGCAAGCGAGCAATG A TCCGTCAACCGACCCGGTCGGTATTA TCGGTCATGGTGCTTTTGAATCGATTTTGTGCCTTCAGCATCGATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCGAAACGGGAACTGGTAAACCATCAGTACCAGCTACCTGCGTTCCACCGGTACGCAGTGCGAACTTGTGAGCTTCCAGGGTATTATTTAAACGTGTTACTACAAACTCATATGTATGTCCCACATTAATCAATTGTTCAGGTTTTGTATAAAGTGAACATGTAGAAACAGTGAGTGAGTTGGAAAGCGAGAAAGTGAAGAAATATTGAGTG ] [-] EMBL CNS08K19 [ AGCGAGCAATGTATTCCGTCAACCGACCCGGTCGGTATAAATTCGGTCATGGTGCTTTTGAATCGATTTTGTGCCTTCAGCATCGATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCGAAACGGGAACTGGTAAACGATCAGTACCAGCTACCTGCGTTCCACCGGTACGCAGTGCAAACTTGTGAGCTTCCAGGGTATTATTTAAACGTGTTACTACAAACTCATATGTATGTCCCACATTAATCAATTGTTCAGGTTTTGTATAAAGTGAACATGTAGAAACAGTGAGTGAGTTGGAAAGCGAGAAAGTGAAGAAAGATTGAGTGAGAAGCGGAGAAAAGAAAGAAAAGAATAAACAAATATACGCCGTAGTTG] consensusID : consensus_9544#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 709 fasta sequence [CCGGCGGTAGCGAGGATCGAAGTAAGTTTCCGCACACGAGACCATCGGCATTTGAAACCAAAGAAGTGAAGAGCCTTGCGGAGACGATCATTCTGAATGCCGAAAGCAGGGGAATGAAGACGCCAAAGAAATCCTTTGTTGAGGAGGCACGCAGCCGATTCGCCCGGTGGGTGTGAGATGCTGAATCCTGGACCCGAGTGGACAGGATGTCCCGAACTCCCGAATCTGCCAAATTTTGCTGGAATAAGTACAATACCCCTACCCCCATCCCTGCACGGGCCATCTTACTGGTGTGTTCCCTCGAGTGATCTCGGACAACGGACCGTTGCTTGCCCTCAAAACAACTGCCAAGCAACAGTGTTACCAACCCAGCGCACACGTTACACATCCTTCCAACATGCACACGTTACACTCGGACACGAACTCAGACATGCAACACGTGCAAGCCTTTTTGGGGTTTGGATGGAATGTTTGTGTTGTGTCGTAGAAGCGCATCTTCGGCTGTGAAGTTGAAGGTTGTGTCACACCCCTCCCTCAACCATCCCTGTTCGCACAGCATCCTTTGATCCTTGTAGCGCACCCTTCCCGCTTTGTCCCGGACTTGCCAACTGGTCAACGTGATGAACTGATACAAACCGCCACCCATATAAGCGATCCCGCAACAGGCGCAGAAAATCTGAAGTGAAACTCCTTCAGCCCAGCATCACCA] [+] EMBL BM645440 [CCGGCGGTAGCGAGGATCGAAGTAAGTTTCCGCACACGAGACCATCGGCATTTGAAACCAAAGAAGTGAAGAGCCTTGCGGAGACGATCATTCTGAATGCCGAAAGCAGGGGAATGAAGACGCCAAAGAAATCCTTTGTTGAGGAGGCACGCAGCCGATTCGCCCGGTGGGTGTGAGATGCTGAATCCTGGACCCGAGTGGACAGGATGTCCCGAACTCCCGAATCTGCCAAATTTTGCTGGAATAAGTACAATACCCCTACCCCCATCCCTGCACGGGCCATCTTACTGGTGTGTTCCCTCGAGTGATCTCGGACAACGGACCGTTGCTTGCCCTCAAAACAACTGCCAAGCAACAGTGTTACCAACCCAGCGCACACGTTACACATCCTTCCAACATGCACACGTTACACTCGGACACGAACTCAGACATGCAACACGTGCAAGCCTTTTTGGGGTTTGGATGGAATGTTTGTGTTGTGTCGTAGAAGCGCATCTTCGGCTGTGAAGTTGAAGGTTGTGTCACACCCCTCCCTCAACCATCCCTGTTCGCACAGCATCCTTTGATCCTTGTAGCGCACCCTTCCCGCTTTGTCCCGGACTTGCCAACTGGTCAACGTGATGAACTGATACAAACCGCCACCCATATAAGCGATCCCGCAACAGGCGCAGAAAATCTGAAGTGAAACTCCTTCAGCCCAGCATCACCA] consensusID : consensus_9544#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 674 fasta sequence [CCACCTCCCAGTGCAAAGGTGGACTCGAACATGCGTCGCCAAGGCAGAAGCGCGCCGGCAGAAGGGCCCGGAAATGAGGAGATGAAAAAATCTAGTCGTTGTTTTTGTTGAATGTGTTTATTTTTGAGGTACTATAAAACAAAGTAGTCTAAACGTTAGCAATGAAAGTTGCAGCAGTAACGGCTGCAGAAGATAGGCGGTACGATGGTGATCGGTCGATCGTAGTGCGTTACTGGCATGGCTACTCTTGTGTAGAGAGCCTGGTGTTTGCCCATGGCAACGGATCGACAATGCATGCGCACACCATTCAATTACGATGTACTCCCATAACCAGACTCTGTAATATAGACTGAACAGTAGTAGATGGTTGGCAGCAGTTGACAGCTTTTAGATCGTATAGTTTTTTTTTTTCGCAATAATTAAACTCTAGTTTGAGCGTTCATGTTCGTTGCGTTTACAGTTTGAATGATAAGTTCTCAGCCTAAGCGAGTTAGTTTTGCTAAGCTTTTTGTTTGCCTTTCATCCAAACTGCCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATATCGGTTCGTATTTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTTTTTGTTTTAATTTTACCATTCGTTTGTGTACAGTAAAAAAAAAACGG] [-] EMBL BM604393 [CCACCTCCCAGTGCAAAGGTGGACTCGAACATGCGTCGCCAAGGCAGAAGCGCGCCGGCAGAAGGGCCCGGAAATGAGGAGATGAAAAAATCTAGTCGTTGTTTTTGTTGAATGTGTTTATTTTTGAGGTACTATAAAACAAAGTAGTCTAAACGTTAGCAATGAAAGTTGCAGCAGTAACGGCTGCAGAAGATAGGCGGTACGATGGTGATCGGTCGATCGTAGTGCGTTACTGGCATGGCTACTCTTGTGTAGAGAGCCTGGTGTTTGCCCATGGCAACGGATCGACAATGCATGCGCACACCATTCAATTACGATGTACTCCCATAACCAGACTCTGTAATATAGACTGAACAGTAGTAGATGGTTGGCAGCAGTTGACAGCTTTTAGATCGTATAGTTTTTTTTTTTCGCAATAATTAAACTCTAGTTTGAGCGTTCATGTTCGTTGCGTTTACAGTTTGAATGATAAGTTCTCAGCCTAAGCGAGTTAGTTTTGCTAAGCTTTTTGTTTGCCTTTCATCCAAACTGCCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATATCGGTTCGTATTTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTTTTTGTTTTAATTTTACCATTCGTTTGTGTACAGTAAAAAAAAAACGG] consensusID : consensus_9544#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 491 fasta sequence [ATAAGCACGCTATTAACGTGCGCGTANCCATGCAAGCGAGCAATGATCCGTCAACCGACCCGGTCGGTATNATCGGTCATGGTCGCTTTTGAATCCGATTTCTGGTGCCTTCTAGCATCGATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCCGAAACGGGAACTGGTAAACCATCAGTACCTAGCTACCTCGCGTTCCGACCGGTACGCAGTCGCGAACTTGTGACGCTTCCCAGGGTATNTATTTAAACCGTGTTACCTACAAACTCTATATGTTATGTCCCACATTAATCGAATTGTTCCAGGTTTTGTATAAAGTGAACATGTAGAAACAGTGGTAGTGAGTTGGAAAGCGAGTAAAGTGAAGAAATATTGAGTGAGAAGCAGAGAAAAGAAAGATAAAGAATATAACGAATTATACGCGCGTAGTTGTGGTAGTGATAAAGGGAGTTATAAAATCAGGCATGTTTNAGNCCTCGTGGCGATTCT] [-] EMBL BX469284 [ATAAGCACGCTATTAACGTGCGCGTANCCATGCAAGCGAGCAATGATCCGTCAACCGACCCGGTCGGTATNATCGGTCATGGTCGCTTTTGAATCCGATTTCTGGTGCCTTCTAGCATCGATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCCGAAACGGGAACTGGTAAACCATCAGTACCTAGCTACCTCGCGTTCCGACCGGTACGCAGTCGCGAACTTGTGACGCTTCCCAGGGTATNTATTTAAACCGTGTTACCTACAAACTCTATATGTTATGTCCCACATTAATCGAATTGTTCCAGGTTTTGTATAAAGTGAACATGTAGAAACAGTGGTAGTGAGTTGGAAAGCGAGTAAAGTGAAGAAATATTGAGTGAGAAGCAGAGAAAAGAAAGATAAAGAATATAACGAATTATACGCGCGTAGTTGTGGTAGTGATAAAGGGAGTTATAAAATCAGGCATGTTTNAGNCCTCGTGGCGATTCT] consensusID : consensus_9544#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 407 fasta sequence [ATCGCCCCGAGGTTACGCACACCATTCAATTACGATGTACTCCCATAACCAGACTCTGTAATATAGACTGAACAGTAGTAGATGGTTGGCAGCGAGTTGACAGCTTTTAGATCGTATAGTTTNTTGTTCGCAATAATTAAACTCTAGATTTGAGCGTTCATAGTTCGTTGCGTTACAGTTTGAATAATAAGTTCTCAACCTAAGCGAGTTAGCTTTTGCTAAGCTTTTATGTTTGCCTTTCATCCAAACCACCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATATCGGTTCGTATTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTTTTTGTNTTAATTTTACCATNTCGTTTGTGTACAGTATGCTTGGTAAAAAAAANAGAAAAAA] [+] EMBL AL932893 [ATCGCCCCGAGGTTACGCACACCATTCAATTACGATGTACTCCCATAACCAGACTCTGTAATATAGACTGAACAGTAGTAGATGGTTGGCAGCGAGTTGACAGCTTTTAGATCGTATAGTTTNTTGTTCGCAATAATTAAACTCTAGATTTGAGCGTTCATAGTTCGTTGCGTTACAGTTTGAATAATAAGTTCTCAACCTAAGCGAGTTAGCTTTTGCTAAGCTTTTATGTTTGCCTTTCATCCAAACCACCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATATCGGTTCGTATTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTTTTTGTNTTAATTTTACCATNTCGTTTGTGTACAGTATGCTTGGTAAAAAAAANAGAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 AAAGAAATCCTTTGTTGAGGAGATGAACTGATACAAACCGCCACCCAGATAAGCGATCCC 60 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 GCAACAGGCGCAGAAAATCTGAAGTGAAACTCCTTCAGCCCAGCATCACCACCAGCAGGA 120 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 CAATCGGTAACACTCTCCGCCGTTTTTTAATGCTCTAGGACGTCTGTTTCTCTGCAGCCG 180 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 ATATCGGAGCCGAAACAAATCTTCATCAAGCACTCCTTCCTGCAGCTTCTGGTCGGCCAT 240 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ----CCACCTCCCAGTGCAAAGGTGGACTCGAACATGCGTCGCCAAGGCAGAAGCGCGCC 56 consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 TTTACCACCTCCCAGTGCAAAGGTGGACTCGAACATGCGTCGCCAAGGCAGAAGCGCGCC 300 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ----------------------------CCGGCGGTAGCGAGGATCGAAGTAAGTTTCCG 32 consensus_9544#2 GGCAGAAGGGCCCGGAAATGAGGAGATGAAAAAATCTAGTCGTTGTTTTTGTTGAATGTG 116 consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 GGCAGAAGGGCCCAGAAATGAGGAGAAGAAAAAATCTAGTCGTTGTTTTTGTTGAATGTG 360 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 CACACGAGACCATCGGCATTTGAAACCAAAGAAGTGAAGAGCCTTGCGGAGACGATCATT 92 consensus_9544#2 TTTATTTTTGAGGTACTATAAAACAAAGTAGT-CTAAACGTTAGCAATGAAAGTTGCAGC 175 consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 TTTATTTTTGAGGTACTATAAAACAAAGTAGTGTTAGACGTTAGTAATGAAAGCTGCAGC 420 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 CTGAATGCCGAAAGCAGGGGAATGAAGACGCCAAAGAAATCCTTTGTTGAGGAGGCACGC 152 consensus_9544#2 AGTAACGGCTGCAGAAGATAGGCGGTACGATGGTGATCGGTCGA--TCGTAGTGCGTTAC 233 consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 AGTAACGGCTGCAGAAGATAGGCGGTACGATGGTGATCGTTCGA--TCGTAGTGCGTTAC 478 consensus_9544#3 --------------------ATAAGCACGCTATTAACGTGCGCG--TANCCATGCAAGCG 38 consensus_9544#1 AGCCGATTCGCCCGGTGGGTGTGAGATGCTGAATCCTGGACCCGAGTGGACAGGATGTCC 212 consensus_9544#2 TGGCATGGCTACTCTTGTGTAGAGAGCCTGGTGTTTGCCCATGGCAACGGATCGACA-AT 292 consensus_9544#4 --------------------------------------------------ATCGCCCCGA 10 consensus_9544#0 TGGCATGGCTGCTCTTGTGTAGAGAGCCTGGTGTTTGCCCATGGCAACGGATCGACA-AT 537 consensus_9544#3 AGCAATGATCCGTCAACCGACCCGGTCGGTATNATCGGTCATGGTCGCTTTTGAATCCGA 98 consensus_9544#1 CGAACTCCCGAATCTGCCAAATTTTGCTGGAATAAGTACAATACCCCTACCCCCATCCCT 272 consensus_9544#2 GCATGCGC-ACACCAT----TCAATTACGATGTACTCCCATAACCAGACTCTGTAATATA 347 consensus_9544#4 GGTTACGC-ACACCAT----TCAATTACGATGTACTCCCATAACCAGACTCTGTAATATA 65 consensus_9544#0 GCATGCGC-ACACCAT----TCAATTACGATGTACTCCCATAACCAGACTCTGTAATATA 592 consensus_9544#3 TTTCTGGT-GCCTTCTAGCATCGATTGAAGGATCGATCCTTAGT-ACGTTCGTTCCCCCG 156 consensus_9544#1 GCACGGGCCATCTTACTGGTGTGTTCCCTCGAGTGATCTCGGACAACGGACCGTTGCTTG 332 * * * * * * consensus_9544#2 GACT--GAACAGTAGTAGATGGTTGGCAGC-AGTTGACA-GCTTTTAGATCGTATAGTTT 403 consensus_9544#4 GACT--GAACAGTAGTAGATGGTTGGCAGCGAGTTGACA-GCTTTTAGATCGTATAGTTT 122 consensus_9544#0 GACT--GAACAGTAGTAGATGGTTGGCAGC-AGTTGACA-GCTTTTAGATCGTATAGTTT 648 consensus_9544#3 AAAC--GGGAACTGGTAAACCATCAGTACCTAGCTACCTCGCGTTCCGACCG----GTAC 210 consensus_9544#1 CCCTCAAAACAACTGCCAAGCAACAGTGTT-ACCAACCCAGCGCACACGTTACACATCCT 391 * * * * * * ** consensus_9544#2 TTTTTTTTCGCAATAATTAAACT-----CTAG-TTTGAGCGTTCAT-GTTCGTTG---CG 453 consensus_9544#4 NTTGTT--CGCAATAATTAAACT-----CTAGATTTGAGCGTTCATAGTTCGTTG---CG 172 consensus_9544#0 TTTTTT--CGCAATAATTAAACT-----CTAG-TTTGAGCGTTCAT-GTTCGTTG---CG 696 consensus_9544#3 GCAGTCG-CGAACTTGTGACGCTT----CCCAGGGTATNTATTTAAACCGTGTTA---CC 262 consensus_9544#1 TCCAACA-TGCACACGTTACACTCGGACACGAACTCAGACATGCAACACGTGCAAGCCTT 450 * * * * ** * * * consensus_9544#2 TTTACAGTTTGAATGATAAGTTC----TCAGCCTAAGCGAGTTAG-TTTTGCTAAGCTTT 508 consensus_9544#4 TT-ACAGTTTGAATAATAAGTTC----TCAACCTAAGCGAGTTAGCTTTTGCTAAGCTTT 227 consensus_9544#0 TTTACAGTTTGAATAATAAGTTC----TCAGCCTAAGCGAGTTAG-TTTTGCTAAGCTTT 751 consensus_9544#3 TACAAACTCTATATGTTATGTCCCACATTAATCGAATTGTTCCAGGTTTTGTATAAAGTG 322 consensus_9544#1 TTTGGGGTTTGGATGGAATGTTT-----GTGTTGTGTCGTAGAAGCGCATCTTCGGCTGT 505 * * * ** * ** * ** * consensus_9544#2 T-TGTTTGCCTTTCATCCAAACTGCCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATAT 567 consensus_9544#4 TATGTTTGCCTTTCATCCAAACCACCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATAT 287 consensus_9544#0 T-TGTTTGCGTTTCATCCAAACCACCTACGGAAGAGCTTCAGTTTGCAGTTAGTAAATAT 810 consensus_9544#3 AACATGTAGAAACAGTGGTAGTGAGTTGGAAAGCGAGTAAAGTGAAGAAATATTGAGTGA 382 consensus_9544#1 GAAGTTGAAGGTTGTGTCACACCCCTCCCTCAACCATCCCTGTTCGCA--CAGCATCCTT 563 * * ** * * consensus_9544#2 CGGTTCGTATTTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTT 627 consensus_9544#4 CGGTTCGTATTT-GTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTT 346 consensus_9544#0 CGGTTCGTATTTTGTATAATTTTGCCCATTACTGTATGATTGTGAGTTGCTTTTAGAGTT 870 consensus_9544#3 GAAGCAGAGAAAAGAAAGATAAAGAATATAACGAATTATACGCGCGTAGTTGTGGTAGTG 442 consensus_9544#1 TGATCCTTGTAGCGCACCCTTCC-CGCTTTGTCCCGGACTTGCCAACTG--GTCAACGTG 620 * * * * * * * ** consensus_9544#2 TTTGTTTTAATTTTACCATT-CGTTTGTGTACAGTAA------------AAAAAAAACGG 674 consensus_9544#4 TTTGTNTTAATTTTACCATNTCGTTTGTGTACAGTATGCTTG-----GTAAAAAAAANAG 401 consensus_9544#0 TTTGTTTTAATTTTACCATT-CGTTTGTGTACAGTATGCTTG-----CGTTAGTTTGTGT 924 consensus_9544#3 ATAAAGGGAGTTATAAAATCAGGCATGTTTNAGNCCTC---------GTGGCGATTCT-- 491 consensus_9544#1 ATGAACTGATACAAACCGCCACCCATATAAGCGATCCCGCAACAGGCGCAGAAAATCTGA 680 * * * * * consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 AAAAAA------------------------------------------------------ 407 consensus_9544#0 TTTTTGTAACATATTTTATGATATTCGATGGGTTGGCTGGTAAATGTCGTCCTTCCCACG 984 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 AGTGAAACTCCTTCAGCCCAGCATCACCA------------------------------- 709 consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 GGAAGGACAGTCCGATGGCTAGTAGTTCTTTGTGCTATTCTATATACGACTATAACGGTT 1044 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 GAAACAAAATAAGCAGCTATTTAACGTGGCGAGCCATGCAAGCGAGCAATGATCCGTCAA 1104 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 CCGACCCGGTCGGTATTATCGGTCATGGTGCTTTTGAATCGATTTTGTGCCTTCAGCATC 1164 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 GATTGAAGGATCGATCCTTAGTACGTTCGTTCCCCGAAACGGGAACTGGTAAACCATCAG 1224 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 TACCAGCTACCTGCGTTCCACCGGTACGCAGTGCGAACTTGTGAGCTTCCAGGGTATTAT 1284 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 TTAAACGTGTTACTACAAACTCATATGTATGTCCCACATTAATCAATTGTTCAGGTTTTG 1344 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ------------------------------------------------------------ consensus_9544#4 ------------------------------------------------------------ consensus_9544#0 TATAAAGTGAACATGTAGAAACAGTGAGTGAGTTGGAAAGCGAGAAAGTGAAGAAATATT 1404 consensus_9544#3 ------------------------------------------------------------ consensus_9544#1 ------------------------------------------------------------ consensus_9544#2 ------------------------------------------------------ consensus_9544#4 ------------------------------------------------------ consensus_9544#0 GAGTGAGAAGCGGAGAAAAGAAAGAAAAGAATAAACAAATATACGCCGTAGTTG 1458 consensus_9544#3 ------------------------------------------------------ consensus_9544#1 ------------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||