|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9546#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1216 fasta sequence
[CATGTTGTGCGCTCCATTATCATCCAGTTCAAAACAAAAAGA-TCGCTTATTTCAAGGGCCCTTATTTCTACCGACCCGTTTGGTGTTTAATTTTTATGCATTTTCGAGTGTGTGTTCTTAAACGATGGATGCATTAGACGAGATAGTTCCTTTTCTAGCGAAAACCGCCCGTCTAGACCTGAAGGTTGTATCGCTCTCGCACGTGCTTGGACTTACTGGCTCCGTGGACGGCATAAAGCTGCTGGTGCAGAATGAAACGTTGCTGAACAACTTGCTCGATCTTACTGGCGAAGAGTCGGTTGCGAAAGATGCAGTGCTGTGCTTCGTTAACATCACGGCGGAAGAAACAGGAGCGGCCGTGGTGGTTGATAAGCTCACCG-AACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCG-CCCCGAGCATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTAC-CACGTGCTTCACGCGCG-TTA-CT-ACAACAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGAGATGGACGTGCTGCCATTCGTACTGCTGCCGCTCGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGTTGGTGGAATCGTTGGCGCAGCTG-TGCGCGACACGCAAGGGTAGGTCGTATTTGCGCGACCACGGTACGTACGAGATTTTGCGCGAGCT-GCACAAATTTGAGTGCAGTCCCGAGGGTGACAAGGTGGTGCTGAACGCGGTTGAGAATGTGGTGGATATTTTAATAAGAACGGAAGAAGAAATCGGCGAGGACAATCTGAAGCAGCTAGAAATTCCGGACGATGTGAAGGCGAAAATCGAAAGCATGACCGATGAGGTGGAAAAATAGAAAAGGCTTTCCCTATCAA]
[+] EMBL CNS09NYJ [CATGTTGTGCGCTCCATTATCATCCAGTTCATAACAAAAAGA TCGCTTATTTCAAGGGCCCTTATTTCTACCGACCCGTTTGGTGTTTAATTTTTATGCATTTTCGAGTGTGTGTTCTTAAACGATGGATGCATTAGACGAGATAGTTCCTTTTCTAGCGAAAACCGCCCGTCTAGATCTGAAGGTTGTATCGCTCTCTCACGTGCTTGGACTTACTGGCTCCGTGGACGGCATAAAGCTGCTGGTGCAGAATGAAACGTTGCTGAACAACTTGCTCGATCTTACTGGCGAAGAGTCGGTTGCGAAAGATGCAGTGCTGTGCTTCGTTAACATCACGGCGGAAGAAACAGGAGCGGCTGTGGTGGTTGATAAGCTCACCG AACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCG CCCCGAGCATCTCGTCGAGCGGGTGCTGCAGCGCTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTAC CACGTGCTTCACGCGCG TTA CT ACAACAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCCGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGAGATGGACGTGCTGCCATTCGTACTGCTGCCGCTCGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCCAGATGTTGGTGGAATCGTTGGCGCct ]
[+] EMBL BX606784 [ CAGTTCAAAACAAAAAGA TCGCTTATTTCAAGGGCCCTTATTTCTACCGACCCGTTTGGTGTTTAATTTTTATGCATTTTCGAGTGTGTGTTCTTAAACGATGGATGCATTAGACGAGATATTTCCTTTTCTAGCGAAAACCGCCCGTCTAGATCTGAAGGTTGTATCGCTCTCTCACGTGCTTGGACTTACTGGCTCCGTGGACGGCATAAAGCTGCTGGTGCAGAATGAAACGTTGCTGAACAACTTGCTCGATCTTACTGGCGAAGAGTCGGTTGCGAAAGATGCAGTGCTGTGCTTCGTTAACATCACGGCGGAAGAAACAGGAGCGGCTGTGGTGGTTGATAAGCTCACCGAAACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGTGACGCCTGGTGCATGGTGCTGTGCAATATCACCCGCCCCCGAGCATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTTCCTCGAAAAGCT ]
[+] EMBL BM639514 [ ccgCAAAACAAAAAGA TCGCTTATTTCAAGGGCCCTTATTTCTACCGACCCGTTTGGTGTTTAATTTTTATGCATTTTCGAGTGTGTGTTCTTAAACGATGGATGCATTAGACGAGATAGTTCCTTTTCTAGCGAAAACCGCCCGTCTAGATCTGAAGGTTGTATCGCTCTCTCACGTGCTTGGACTTACTGGCTCCGTGGACGGCATAAAGCTGCTGGTGCAGAATGAAACGTTGCTGAACAACTTGCTCGATCTTACTGGCGAAGAGTCGGTTGCGAAAGATGCAGTGCTGTGCTTCGTTAACATCACGGCGGAAGAAACAGGAGCGGCTGTGGTGGTTGATAAGCTCACCG AACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGTGACGCCTGGTGCATGGTGCTGTGCAATATCACCCG CCCCGAGCATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTAC CACGTGCTTCACGCGCG TTAGCT ACAACAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGT ]
[+] EMBL CNS08CZ7 [ CAAAGAAC TCGC CATTTCAAGGGGGC AACTGTACCGACCCGTTTGGTGTTTAATTTTTATGCATTTTCGAGTGTGAGTTCTTAAACGATGGATGCATTAGACGAGATAGTTCCTTTTCTAGCGAAAACCGCCCGTCTAGACCTGAAGGTTGTATCGCTCTCGCACGTGCTTGGACTTACTGGCTCCGTGGACGGCATAAAGCTGCTGGTGCAGAATGAAACGTTGCTGAACAACTTGCTCGATCTTACTGGCGAAGAGTCGGTTGCGAAAGATGCAGTGCTGTGCTTCGTTAACATCACGGCGGAAGAAACAGGAGCGGCCGTGGTGGTTGATAAGCTCACCG AACGATTGGCCCCACTGGCGTACGAAGCGGTGCTGAATGAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCG CCCCGAGCATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTAC CACGTGCTTCACGCGCG TTA CT ACAACAAGAAAAAGTGCCACCTCAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGAGATGGACGTGCTGCCATTCGTACTGCTGCCGCTCGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGTTGGTGGAATCGTTGGCGC CTGCTGCGCGACACGCAAGGGTAGGTCGTAT ]
[+] EMBL CNS08RIA [ AGACTCGC ATTTCAAGGGGGC A CTGTACCGACCCGTTTGGTGTTTAATTTTTATGCATTTTCGAGTGTGAGTTCTTAAACGATGGATGCATTAGACGAGATAGTTCCTTTTCTAGCGAAAACCGCCCGTCTAGACCTGAAGGTTGTATCGCTCTCGCACGTGCTTGGACTTACTGGCTCCGTGGACGGCATAAAGCTGCTGGTGCAGAATGAAACGTTGCTGAACAACTTGCTCGATCTTACTGGCGAAGAGTCGGTTGCGAAAGATGCAGTGCTGTGCTTCGTTAACATCACGGCGGAAGAAACAGGAGCGGCCGTGGTGGTTGATAAGCTCACCG AACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCG CCCCGAGCATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTAC CACGTGCTTCACGCGCG TTA CTAACAACAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTTTTTGAGTGGCTGCTGAGTGAGGAGATGGACGTGCTGCCATTCG ]
[+] EMBL CNS08FXH [ TCGC CATTTCAAGGGGGC AACTGTACCGACCCGTTTGGTGTTTAATTTTTATGCATTTTCGAGTGTGAGTTCTTAAACGATGGATGCATTAGACGAGATAGTTCCTTTTCTAGCGAAAACCGCCCGTCTAGACCTGAAGGTTGTATCGCTCTCGCACGTGCTTGGACTTACTGGCTCCGTGGACGGCATAAAGCTGCTGGTGCAGAATGAAACGTTGCTGAACAACTTGCTCGATCTTACTGGCGAAGAGTCGGTTGCGAAAGATGCAGTGCTGTGCTTCGTTAACATCACGGCGGAAGAAACAGGAGCGGCCGTGGTGGTTGATAAGCTCACCG AACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCG CCCCGAGCATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTAC CACGTGCTTCACGCGCG TTA CT ACAACAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTTCTGCGACGGTTGCTACCGTTCGTGCATGACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTTGCTGCTGAGTGAGGAGATGGACGTGCTGCCATTCGTACTGCTGCCGCTCGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGTTGGTGGAATCGTTGGCGCA CTGTTTCGCGACACGCAAGGGTAGGTCGTATTTTCGCG ]
[+] EMBL CNS090XO [ TGTTCTTAAACGATGGATGCATTAGATGAGATAGTTCCTTTTCTAGCGAAAACCGCCCGTCTAGACCTGAAGGTTGTATCGCTCTCGCACGTGCTTGGACTTACTGGCTCCGTGGACGGCATAAAGCTGCTGGTGCAGAATGAGACGTTGCTGAACAACTTGCTCGATCTTACTGGCGAAGAGTCGGTTGCGAAAGATGCAGTGCTGTGCTTCGTTAACATCACGGCGGAAGAAACAGGAGCGGCTGTGGTAGTTGATAAGCTCACCG AACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCG CCCCGAGCATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTAC CACGTGCTTCACGCGCG TTA CT ACAACAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCGGTGAGGTGTTCTGTAACCAGCAGACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGAGATGGATGTGCTGCCGTTCGTACTGCTACCGCTCGCCGGACCGGAGGAGCTGGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGATAGTGGAATCGTTGGCACAGCTG TGCGCGACACGCAAGGGTAGGTCGTACTTGCGCGACCACGGTACGTACGAGATTTTGCGCGA CTGGCACAAATTTGAGTGCAGTCCCGAGGGTGACAAGGTGGTGCTGAACGCGGTTGAGAATGTGGTAGATATTTTAATAAGAACGGAAGAAGAAATCGGTGAGGACAATCTGAAGCAGTTAGAAATTCCGGACGATGTGAA ]
[+] EMBL CNS08XF5 [ AGCGAAAACCGCCCGTCTAGACCTGAAGGTTGTATCGCTCTCGCACGTGCTTGGACTTACTGGCTCCGTGGACGGCATAAAGCTGCTGGTG ]
[-] EMBL CNS08CZ8 [ ACTTGCTCGATCTAACTGGCGAAGAGTCGGTTGCGAAAGATGCAGTGCTGTGCTTCGTTAACATCACGGCGGAAGAAACAGGAGCGGCCGTGGTGGTTGATAAGCTCACCG AACGATTGGCCCCACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCG CCCCGAGCATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTAC CACGTGCTTCACGCGCG TTAGCT ACAACAAGCAAAAGTGCCACCTCAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCTTTTGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGAGATGGACGTGCTGCCATTCGTACTGCTGCCGTTCGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGTTGGTGGAATCGTTGGCGCAGCTG TGCGCGACACGCAAGGGTAGGTCGTATTTGCGCGACCACGGTACGTACGAGATTTTGCGCGAGCT GCACAAATTTGAGTGCAGTCCCGAGGGTGACAAGGTGGTGCTGAACGCGGTTGAGAATGTGGTGGATATTTTAATAAGAACGGAAGAAGAAATCGGCGAGGACAATCTGAAGCAGCTAGAAATTCCGGACGATGTGAAGGCGAAAATCGAAAGCATGACCGATGAGGTGGAAAAATAGAAAAGGATTTCCCTATCAA]
[-] EMBL CNS08FXI [ TCTAACTGGCGAAAAGTCGGTTGCGAAAGATGAAGTGCTGTGCTTCGTTAACATCACGGCGGAAGAAACAGGAGCGGCCGTGGTGGTTGATAAGCTCACCG AACGATTGGTCCAACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCG CCCCGAGCATCTCGTCGAGCGGGTG TGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCCCACTCACGTGCTTAACGCGCG TTAGCT ACAAAAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGAACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGAGATGGACGTGCTGCCATTCGAACTGCTGCCGCTCGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGTTGGTGGAATCGTTGGCGCAGCTG TGCGCGACACGCAAGGGTAGGTCGTATTTGCGCGACCACGGTACGTACGAGATTTTGCGCGAGCT GCACAAATTTGAGTGCAGTCCCGAGGGTGACAAGGTGGTGCTGAACGCGGTTGAGAATGTGGTGGATATTTTAATAAGAACGGAAGAAGAAATCGGCGAGGACAATCTGAAGCAGCTAGAAATTCCGGACGATGTGAAGGCGAAAATCGAAAGCATGACCGATGAGGTGGAAAA ]
[+] EMBL CNS0907I [ TGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTAC CACCCGCTT GGGCGCG TTA CT ACAACAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTTCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTTGCTGCTGAGTGAGGAGATGGAAAAAAAGCCATTCGTACTGCTGCCGCTCGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGTTGGTGGAATCGTTGGCGCA TG TGCGCGACACGCAAGGGT ]
[-] EMBL CNS08RIB [ cCGCGCGTTTG CT ACCACAAGCAAAAGTGCCACCTTGACTACCTCGGTCCCCTGTTTAGCAACGTGTAGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGAACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGAGATGGACGTGCTGCCATTCGAACTGCTGCCGCTCGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGTTGGTGGAATCGTTGGCGCAGCTG TGCGCGACACGCAAGGGTAGGTCGTATTTGCGCGACCACGGTACGTACGAGATTTTGCGCGAGCT GCACAAATTTGAGTGCAGTCCCGAGGGTGACAAGGTGGTGCTGAACGCGGTTGAGAATGTGGTGGATATTTTAATAAGAACGGAAGAAGAAATCGGCGAGGACAATCTGAAGCAGCTAGAAATTCCGGACGATGTGAAGGCGAAAATCGAAAGCATGACCGATGAGGTGGAAAAA ]
[+] EMBL CNS08OA8 [ A CT ACAACAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCTGTGTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGAGATGGACG ]
[-] EMBL CNS09NYK [ TCGGTCCCCCGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGAGATGGACGTGCTGCCATTCGTACTGCTGCCGCTCGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGTTGGTGGAATCGTTGGCGCAGCTG TGCGCGACACGCAAGGGTAGGTCGTATTTGCGCGACCACGGTACGTACGAGATTTTGCGCGAGCT GCACAAATTTGAGTGCAGTCCCGAGGGTGACAAGGTGGTGCTGAACGCGGTAGAGAATGTGGTGGATATTTTAATAAGAACGGAAGAAGAAATCGGCGAGGACAATCTGAAGCAGTTAGAAATTCCGGACGATGTGAAGGCGAAAATCGAAAGCATGACCGATGAGGTGGAAAAATAGAAAAatc ]
[-] EMBL CNS0907J [ CTGCTGCGACGGTTGCTACCCTTCGGGGGTCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGGGGAGATGGACGTGCTGCCATTCGCACTGCTGCAAAAAGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGTTGGTGGAATCGTTGGCGCAGCTG TGCGCGACACGCAAGGGTAGGTCGTATTTGCGCGACCACGGTACGTACGAGATTTTGCGCGAGCT GCACAAATTTGAGTGCAGTCCCGAGGGTGACAAGGTGGTGCTGAACGCGGTTGAGAATGTGGTGGATATTTTAATAAGAACGGAAGAAGAAATCGGCGAGGACAATCTGAAGCAGCTAGAAATTCCGGACGATGTGAAGGCGAAAATCGAAAGCATGACCGATGAGGTGGAAAAATAGAAAAGGCcaaccc ]
[-] EMBL CNS08OA9 [ CTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCCGCATCGTGCGGCGGGGCGGTGCCGTTGGTTTGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCCCGAGTGGCTGCTGAGTGAGGAGATGGACGTAAAAAAAATCGTACTGCTGCCGCTCGCCGGACCGGAGGAGCTAGACGACGAGACGAACGAGAAGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATGTTGGTGGAATCGTTGGCGCAGCTG TGCGCGACACGCAAGGGTAGGTCGTATTTGCGCGACCACGGTACGTACGAGATTTTGCGCGAGCT GCACAAATTTGAGTGCAGTCCCGAGGGTGACAAGGT GTTTTTTTTTTTTTTGAGAATGTGGTGGATATTTTAATAAGAACGGAAGAAGAAATCGGCGAGGACAATCTGAAGCAGCTAGAAATTCCGGACGATGTGAAGGCGAAAATCGAAAGCATGACCGATGAGGTGGAAA ]
consensusID : consensus_9546#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 660 fasta sequence
[GAATCGCCCGAGGTTTAAAGATGCAGTGCTGTGCTTCGTTACATCACGGCGTGAAGAAACAGGAGCGGCTGTGGTAGTTGATAAGCTCACCGAACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCGCCCCGAGCATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTACCACGTGCTTCACTGCGCGTTAGCTACAACAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTCNGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGANATGGATGTGCTGCCGTATCGTACTGCTACCGCTCGCCGGACCGGAGGCACGCTGGACGACGCAGACGAACGAGGAACGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATCGATAGTGGA]
[+] EMBL AL692496 [GAATCGCCCGAGGTTTAAAGATGCAGTGCTGTGCTTCGTTACATCACGGCGTGAAGAAACAGGAGCGGCTGTGGTAGTTGATAAGCTCACCGAACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGATGAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCGCCCCGAGCATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTACCACGTGCTTCACTGCGCGTTAGCTACAACAAGCAAAAGTGCCACCTTAACTACCTCGGTCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCAGACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCGGGGCGGTGCCGTTGGTTCNGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGCTGCTGAGTGAGGANATGGATGTGCTGCCGTATCGTACTGCTACCGCTCGCCGGACCGGAGGCACGCTGGACGACGCAGACGAACGAGGAACGCTGCCGGTTGATTTGCAGTACCTTGGGCCGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATCGATAGTGGA]
[-] EMBL CNS090XP [ CAAAATAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCCCCCCGAGCATCTCGTCGAGCGGG GGTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTTACCACGTGCTTTAC GCGCGTTAGCTACAAAAAGCAAAAGTGCCCCCTTAACTACCTCGGTCCCCTGTTTAGCA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9546#0 CATGTTGTGCGCTCCATTATCATCCAGTTCAAAACAAAAAGATCGCTTATTTCAAGGGCC 60
consensus_9546#1 ------------------------------------------------------------
consensus_9546#0 CTTATTTCTACCGACCCGTTTGGTGTTTAATTTTTATGCATTTTCGAGTGTGTGTTCTTA 120
consensus_9546#1 ------------------------------------------------------------
consensus_9546#0 AACGATGGATGCATTAGACGAGATAGTTCCTTTTCTAGCGAAAACCGCCCGTCTAGACCT 180
consensus_9546#1 ------------------------------------------------------------
consensus_9546#0 GAAGGTTGTATCGCTCTCGCACGTGCTTGGACTTACTGGCTCCGTGGACGGCATAAAGCT 240
consensus_9546#1 ------------------------------------------------------------
consensus_9546#0 GCTGGTGCAGAATGAAACGTTGCTGAACAACTTGCTCGATCTTACTGGCGAAGAGTCGGT 300
consensus_9546#1 -------------------------------------------------GAATCGCCCGA 11
*** * * *
consensus_9546#0 TGCG-AAAGATGCAGTGCTGTGCTTCGTTAACATCACGGCG-GAAGAAACAGGAGCGGCC 358
consensus_9546#1 GGTTTAAAGATGCAGTGCTGTGCTTCGTTA-CATCACGGCGTGAAGAAACAGGAGCGGCT 70
* ************************* ********** *****************
consensus_9546#0 GTGGTGGTTGATAAGCTCACCGAACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGAT 418
consensus_9546#1 GTGGTAGTTGATAAGCTCACCGAACGATTGGTCCCACTGGCGTACGAAGCGGTGCTGGAT 130
***** ******************************************************
consensus_9546#0 GAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCGCCCCGAG 478
consensus_9546#1 GAGAACTGCAAACTAAGCGACGCCTGGTGCATGGTGCTGTGCAATATCACCCGCCCCGAG 190
************************************************************
consensus_9546#0 CATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTT 538
consensus_9546#1 CATCTCGTCGAGCGGGTGCTGGCGCGTTTGCTGGCGATCGAATTTTCCCTCGAAAAGCTT 250
************************************************************
consensus_9546#0 ACCACGTGCTTCAC-GCGCGTTA-CTACAACAAGCAAAAGTGCCACCTTAACTACCTCGG 596
consensus_9546#1 ACCACGTGCTTCACTGCGCGTTAGCTACAACAAGCAAAAGTGCCACCTTAACTACCTCGG 310
************** ******** ************************************
consensus_9546#0 TCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCA 656
consensus_9546#1 TCCCCTGTTTAGCAACGTGTCGCAGAGTAAGGCGGGCCGCGAGGTGTTCTGTAACCAGCA 370
************************************************************
consensus_9546#0 GACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCG 716
consensus_9546#1 GACGGGACTGCTGCGACGGTTGCTACCGTTCGTGCATCACGAGGGCAGCATCGTGCGGCG 430
************************************************************
consensus_9546#0 GGGCGGTGCCGTTGGTT-TGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGC 775
consensus_9546#1 GGGCGGTGCCGTTGGTTCNGCTTAAAAACGTTTGCTTCGATTCTTCCGTGCACGAGTGGC 490
***************** *****************************************
consensus_9546#0 TGCTGAGTGAGGAGATGGACGTGCTGCCAT-TCGTACTGCTGCCGCTCGCCGGACCGGAG 834
consensus_9546#1 TGCTGAGTGAGGANATGGATGTGCTGCCGTATCGTACTGCTACCGCTCGCCGGACCGGAG 550
************* ***** ******** * ********** ******************
consensus_9546#0 GA--GCTAGACGACG-AGACGAACGAGAA--GCTGCCGGTTGATTTGCAGTACCTTGGGC 889
consensus_9546#1 GCACGCTGGACGACGCAGACGAACGAGGAACGCTGCCGGTTGATTTGCAGTACCTTGGGC 610
* *** ******* *********** * *****************************
consensus_9546#0 CGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGAT-GTTGGTGGAATCGTTGGCG 948
consensus_9546#1 CGGATAAGAGGCGCGAGGATGATCCGGACGTGCGCAAGATCGATAGTGGA---------- 660
**************************************** * * *****
consensus_9546#0 CAGCTGTGCGCGACACGCAAGGGTAGGTCGTATTTGCGCGACCACGGTACGTACGAGATT 1008
consensus_9546#1 ------------------------------------------------------------
consensus_9546#0 TTGCGCGAGCTGCACAAATTTGAGTGCAGTCCCGAGGGTGACAAGGTGGTGCTGAACGCG 1068
consensus_9546#1 ------------------------------------------------------------
consensus_9546#0 GTTGAGAATGTGGTGGATATTTTAATAAGAACGGAAGAAGAAATCGGCGAGGACAATCTG 1128
consensus_9546#1 ------------------------------------------------------------
consensus_9546#0 AAGCAGCTAGAAATTCCGGACGATGTGAAGGCGAAAATCGAAAGCATGACCGATGAGGTG 1188
consensus_9546#1 ------------------------------------------------------------
consensus_9546#0 GAAAAATAGAAAAGGCTTTCCCTATCAA 1216
consensus_9546#1 ----------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||