These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9563#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1854 fasta sequence [CCGGCCGGTGGTCGGGAGCAGATCGAATTGTGTTACTAGACTTGGTCGCGTCCAGGCAACAATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTGTTTCTGGTGGTCCCCGCGCTCACCCTGCTTTACATATACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTGGGCAACATGAAGGGCGTCGGGTCCGAGATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCACTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAGATCGGTGACGAGTTTCTGGCCACGGTG-AATCGGTTCGTCGAGCGGGATGAGCCGTTGGATGTGAAGCTGCTGTCACAGTGCTTCACCTGCGACGTGGTAGGCTCGTGCGCGTT-CGGGCTGCAGTGCAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATTGGCGACAAGGTGTTTAAACCACCAGCGTGGCGAAATATGCTCGCGTTTGCGCTCATCTCGTTTAAGAAGCTGGCGAAACGATTGCGCCTACCCGTGCTACCGGGCGAGGTGACGTCATTCTTTATGCCGCTTGTCACCGAGACGGTGGCGGATCGGGAACGGAACTCGATCGAACGGCCCGATTTTCTCAATCTGCTGATACAGCTCAAGAACAAAGGTACGGTCGAGGACGAAACAACGGAGGGACTGCAAAAGCTGACGCTCGACGAGGTGGCAGCGCAGGCGTTTGTGTTCTTCTTCGCCGGGTTCGAAACGTCCTCGACAACGCTCTCGTTCGCACTGTTCGAGTTGGCCAACAATCCCGACATTCAGGAGCGAGTGC-GGGCGGAGATGCTGGAAAAGCTTCAACTCCACGACGGCAAGATAACGTACGACGCCCTGAAGGAGATGACGTACCTCGATCAGGTCATCAATGAGACACTTCGTATGTATCCGCCAGTTCCGCAGCTGATACGCGTCACCACTCAACCGTACAAGGTGGAGGGAGCGAACGTATCGCTCGAGCCCGACACGATGCTGATGATACCGATCTACGCGATACATCACGATGCCAGCATCTATCCCGACCCGGAACGTTTCGATCCGGATCGGTTTGCACTGGCCGCGACGCACGCAAGGCACACTCACGCGTTCCTGCCGTTCGGCGATGGGCCGCGGAATTGCATCGGCATGCGCTTTGGGCTGCTGGAGGTAAAGTTTGGCATCGTGCAGATGGTGAGCAAGCTGCGGTTCACCGTCAGCGAGCGTATGCAGATGCCGCTCCGGATGTCGAAAACGGCCTCCATACTGGAGGCGGAAGGAGGCATTTGGCTTAACGCAACGAAACTGTGAAGCTGTGCCAAGCTGTGCTGACTTATCGCGCCGGTCAATGTTTGATATCTGATAGGAATGACATGTCTATCTGGGGGTCCGGGGGTTTGGCTTTGCCAAACCAATTGTTGCCATATTTTGCTTACTCTTTTAGGTTACTTACTGCTGCAATGATCCCGTCAATATTAGACTGTTTGCAACCGAAGTAAAAAATAAGAAAACTGATAAAACTATATCGAAATAAACAGGAGTTACTAATCGACATAAAAGTGCAATGCTACGAAG] [+] EMBL BM641228 [CCGGCCGGTGGTCGGGAGCAGATCGAATTGTGTTACTAGACTTGGTCGCGTCCAGGCAACAATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTGTTTCTGGTGGTCCCCGCGCTCACCCTGCTTTACATATACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTGGGCAACATGAAGGGCGTCGGGTCCGAGATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCACTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAAATCGGTGACGAGTTTCTGGCCACGGTG AATCGGTTCGTCGAGCGGGATGAGCCGTTGGATGTGAAGCTGCTGTCACAGTGCTTCACCTGCGACGTGGTAGGCTCGTGCGCGTT CGGGCTGCAGTGCA ] [+] EMBL BM636906 [CCGGCCGGTGGTCGGGAGCAGATCGAATTGTGTTACTAGACTTCGTCGCGTCCAGGCAACAATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTATTTCTGGTGGTCCCCGCGCTCACCCTGCTTTACCTCTACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTAGGCAACATGAAGGGCGTCGGGTCCGAGATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCGCTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGATGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAGATCGGTGACGAGTTTCTGGCCACGGTGAAATCGGTTCGTCGAGCGGGATGAGCCGTTGGATGTGAAGCTGCTGTCACAGTGCTTCACCTGCGACGTGGTACGCTCGTGCGCGTTCCGGGTTG ] [+] EMBL BM654872 [ ccGGACGGGAGCAGATCGTATTGTGTTACTAGACTTCGTCGCGTCCAGGCAACAATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTATTTCTGGTGCTCCCCGCGCTCACCCTGCTTTACATCTACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTGGGCAACATGAAGGGCATCGGGTCCGAAATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCGCTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAGATCGGTGACGAGTTTCTGGCCACGGTG AATCGGTTCGTCGAGCGGGATGAGCCGTTGGATGTGAAGCTGGTGTCACAGTGCTTCACCTGCGACGTGGTAGGCTCGTGCGCGTT CGGGCTGCAGTGCA ] [+] EMBL BM605356 [ ccGGACGGGAGCAGATCGTATTGTGTTACTAGACTTCGTCGCGTCCAGGCAACAATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTATTTCTGGTGCTCCCCGCGCTCACCCTGCTTTACATCTACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTGGGCAACATGAAGGGCATCGGGTCCGAAATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCGCTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAGATCGGTGACGAGTTTCTGGCCACGGTG AATCGGTTCGTCGAGCGG ] [+] EMBL BM619147 [ ccgCGGGAGCAGATCGAATTGTGTTACTAGACTTGGTCGCGTCCAGGCAACAATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTGTTTCTGGTGGTCCCCGCGCTCACCCTGCTTTACATATACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTGGGCAACATGAAGGGCGTCGGGTCCGAGATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCACTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATG ] [+] EMBL BM645271 [ ccGAGCAGATCGAATTGTGTTACTAGACTTGGTCGCGTCCAGGCAACAATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTGTTTCTGGTGGTCCCCGCGCTCACCCTGCTTTACATATACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTGGGCAACATGAAGGGCGTCGGGTCCGAGATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCACTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAAATCGGTGACGAGTTTCTGGCCACGGTG AATCGGTTCGTCGAGCGGGATGAGCCGTTGGATGTGAAGCTGCTGTCACAGTGCTTCACCTGCGACGTGGTAGGCTCGTGCGCGTT CGGGCTG ] [+] EMBL BM591305 [ ccGCAGATCGAATTGTGTTACTAGACTTGGTCGCGTCCAGGCAACAATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTGTTTCTGGTGGTCCCCGCGCTCACCCTGCTTTACATATACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTGGGCAACATGAAGGGCGTCGGGTCCGAGATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCACTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCC ] [+] EMBL BM633998 [ ccgGAATTGTGTTACTAGACTTGGTCGCGTCCAGGCAACAATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTGTTTCTGGTGGTCCCCGCGCTCACCCTGCTTTACATATACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTGGGCAACATGAAGGGCGTCGGGTCCGAGATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCACTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAAATCGGTGACGAGTTTCTGGCCACGGTG AATCGGTTCGTCGAGCGGGTTGAGCCtgg ] [+] EMBL BM583655 [ ccggtATTGTGTTACTAGACTTCGTCGCGTCCAGGCAACAATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTATTTCTGGTGCTCCCCGCGCTCACCCTGCTTTACATCTACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTGGGCAACATGAAGGGCATCGGGTCCGAAATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCGCTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAGATCGGTGACGAGTTTCTGGCCACGGTG AATCGGTTCGTCGAGCGGGATGAGCCGTTGGATGTGAAGCTGGTGTCACAGTGCTTCACCTGCGACGTGGTAGGCTCGTGCGCGTT CGGGCTGCAGTGCAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATCGGCGAC ] [+] EMBL AY095933 [ GTCAGTGTTGTGTTATTTCTGGTGGTCCCCGCGCTCACCCTGCTTTACCTCTACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAGCTGGAAGCGTCCTTCCCGCTAGGCAACATGAAGGGCGTCGGGTCCGAGATTCACTTCAACGATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCGCTCGTCGGGCTGTACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTGGTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAAATCGGTGACGAGTTTCTGGCCACGGTG AATCGGTTCGTCGAGCGGGATGAGCCGTTGGATGTGAAGCTGCTGTCACAGTGCTTCACCTGCGACGTGGTAGGCTCGTGCGCGTT CGGGCTGCAGTGCAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATTGGCGACAAGGTGTTTAAACCACCAGCGTGGCGAAATATGCTCGCGTTTGCGCTCATCTCGTTTAAGAAGCTGGCGAAACGATTGCGCCTACCCGTGCTACCGGGCGAGGTGACGTCATTCTTTATGCCGCTTGTCACCGAGACGGTGGCGGATCGGGAACGGAACTCGATCGAACGGCCCGATTTTCTCAATCTGCTGATACAGCTCAAGAACAAAGGTACGGTCGAGGACGAAACAACGGAGGGACTGCAAAAGCTGACGCTCGACGAGGTGGCAGCGCAGGCGTTTGTGTTCTTCTTCGCCGGGTTCGAAACGTCCTCGACAACGCTCTCGTTCGCACTGTTCGAGTTGGCCAACAATCCCGACATTCAGGAGCGAGTGC GGGCGGAGATGCTGGAAAAGCTTCAACTCCACGACGGCAAGATAACGTACGACGCCCTGAAGGAGATGACGTACCTCGATCAGGTCATCAATGAGACACTTCGTATGTATCCGCCAGTTCCGCAGCTGATACGCGTCACCACTCAACCGTACAAGGTGGAGGGAGCGAACGTATCGCTCGAGCCCGACACGATGCTGATGATACCGATCTACGCGATACATCACGATGCCAGCATCTATCCCGACCCGGAACGTTTCGATCCGGATCGGTTTGCACTGGCCGCGACGCACGCAAGGCACACTCACGCGTTCCTGCCGTTCGGCGATGGGCCGCGGAATTGCATCGGCATGCGCTTTGGGCTGCTGGAGGTAAAGTTTGGCATCGTGCAGATGGTGAGCAAGCTGCGGTTCACCGTCAGCGAGCGTATGCAGATGCCGCTCCGGATGTCGAAAACGGCCTCCATACTGGAGGCGGAAGGAGGCATTTGGCTTAACGCAAC ] [+] EMBL BX623959 [ AGCGGGACGATCCCCTGTCCGGGCATCTGTTTGCGCTGGATGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAGATCGGTGACGAGTTTCTGGCCACGGTG AATCGGTTCGTCGAGCGGGATGAGCCGTTGGATGTGAAGCTGCTGTCACAGTGCTTCACCTGCGACGTGGTAGGCTCGTGCGCGTT CGGGTTGCAGTGCAATTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATTGGCGACAAGGTGTTTAAACCACCAGCGTGGCGAAATATGCTCGCGTTTGCGCTCATCTCGTTTAAGAAGCTGGCGAAACGATTGCGCCTACCCGTGCTACCGGGCGAGGTGACGTCATTCTTTATGCCGCTTGTCACCGAGACGGTGGCGGATCGGGAACGGAATTCGATCGAACGGCCCGATTTTCTCAATCTGCTGATACAGCTCAAGAACAAAGGTACGGTCGAGGATGAAACAACGGAGGGACTGCAAAAGCTGACGCTCGACGAGGTGGCAGCGCAGGCGTTTGTGTTCTTCTTCGCCGGGTTCGAAACGTCCTCGACAACGCTCTCGTTCGCACTGTTCGAGTTGGNCAACAATCCCGACATTCAGGAGCGAGTGC GGGCGGAGATGCTGGAAAAGCTTCAACTCCACGACGGCAAGATAACGTACGACGCCCTGAANGAGATGACGTACCTCGATCAGGTCATCAATGAGA ] [+] EMBL BX615427 [ TGTTCAGCACGATTTGCGAGATCGGTGACGAGTTTCTGGCCACGGTG AATCGGTTCGTCGAGCGGGATGAGCCGTTGGATGTGAAGCTGCTGTCACAGTGCTTCACCTGCGACGTGGTAGGCTCGTGCGCGTT CGGGCTGCAGTGCAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATTGGCGACAAGGTGTTTAAACCTCCAGCGTGGCGAAATATGCTGGTGTTTGCGCTCATCTCGTTTAAGAAGCTGGCGAAACGATTGCGCCTACCCGTGCTACCGGGCGAGGTGACGTCATTCTTTATGCCGCTTGTCACCGAGACGGTGGCGGATCGGGAACGGAATTCGATCGAACGGCCCGATTTTCTCAATCTGCTGATACAGCTCAAGAACAAAGGTACGGTCGAGGATGAAACAACGGAGGGACTGCAAAAGCTGACGCTCGACGAGGTGGCAGCGCAGGCGTTCGTGTTCTTTTTCGCCGGGTTCGAAACGTCCTCGACAACGCTCTCGTTCGCACTGTTCGAGTTGGCCAACAATCCCGACATTCAGGAGCGAGTGC GGGCGGAGg ] [+] EMBL BM637407 [ ccgGCGGGATGAGCCGTTGGATGTGAAGCTGCTGTCACAGTGCTTCACCTGCGACGTGGTAGGCTCGTGCGCGTT CGGGCTGCAGGGCAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATTGGCGACAAGGTGTTTAAACCACCAGCGTGGCGAAATATGCTGGTGTTTGCGCTCATCTCGTTTAAGAAGCTGGCGAAACGATTGCGCTTACCCGTGCTACCGGGCGAGGTGACGTCATTCTTTATGCCGCTTGTCACCGAGACGGTGGCGGATCGGGAACGGAACTCGATCGAACGGCCCGATTTTCTCAATCTGCTGATACAGCTCAAGAACAAAGGTACGGTCGAGGACGAAACAACGGAGGGACTGCAAAAGCTGACGCTCGACGAGGTGGCAGCGCAGGCGTTCGTGTTCTTCTTCGCCGGGTTCGAAACGTCCTCGACAACGCTCTCGTTCGCACTGTTCGAGTTGGCCAACAATCCCGACATTCAAGAGCGAGTGCGGGGCGGAGGTGCTGG AAAGCTTCAACTCCACGACGGCAAGATAACGTACGACGCCCTGAAGGAGATG ] [+] EMBL BX626879 [ AGCGAACGTATCGCTCGAGCCCGACACGATGCTGATGATACCGATCTACGCGATACATCACGATGCCAGCATCTATCCCGACCCGGAACGTTTCGATCCGGATCGGTTTGCACTGGCCGCGACGCACGCAAGGCACACTCACGCGTTCCTGCCGTTCGGCGATGGGCCGCGGAATTGCATCGGCATGCGCTTTGGGCTGCTGGAGGTAAAGTTTGGCATCGTGCAGATGGTGAGCAAGCTGCGGTTCACCGTCAGCGAGCGTATGCAGATGCCGCTCCGGATGTCGAAAACGGCCTCCATACTGGAGGCGGAAGGAGGCATTTGGCTTAACGCAACGAAACTGTGAAGCTGTGCCAAGCTGTGCTGACTTATCGCGCCGGTCAATGTTTGATATCTGATAGGAATGACATGTCTATCTGGGGGTCCGGGGGTTTGGCTTTGCCAAACCAATTGTTGCCATATTTTGCTTACTCTTTTAGGTTACTTACTGCTGCAATGATCCCGTCAATATTAGACTGTTTGCAACCGAAGTAAAAAATAAGAAAACTGATAAAACTATATCGAAATAAACAGGAGTTACTAATCGACATAAAAGTGCAATGCTACGAAG] consensusID : consensus_9563#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 855 fasta sequence [CCGCGGTCGCTTAGTACGCATCGCCATTTTCGTCACGTTTTGGGCGTTCGCGCAGAATGACAGTGTGGTTATTGTTGGTGGTGGTGGTAGCAACGCTACTCTACTATTACGTATGGCGCCGCTACCGCTACTGGAGAGACAGAGGCATTGCCGAACTCGACCCATCCTTTCCGCTCGGCGACATGAGGGGTGTGGGAACGACGCGCGGCTTTAACGACATGCTCGATGAAGCGTACGGACGGGTGCGGGGCAAATCGGCAGCAGTCGGGGTATACTTTCTCATCAGCCCGATACTGATCGTGGCCGATCTCGACCTTGCCAAGCAGATACTGGTGAAAGATTTTCACCTGTTCCACGATCGCGGCATGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTCTCGATCGGCGGCGAACGGTGGCGCTACCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAATCAATGTTTATTACGATACGTGAAATTGGAGACGAGTTGCTCGCCTGCTTCGACAAGTATATTGATTGCGGGGACCCGATCGATATCAAGTTACTGTGCCAGTGCTTCACCTGCGACGTGGTAAGCTCGTGCGCCTTATGGGCTGCAGTGTAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATCGGCGACAAGGTGTTCCGGGCAAGCCCAATGCGTATGGTGTACTCTATGGCGATCGGGATCTTTCCGCGGCTTTCGCGAGCCCTCCGACTGCCCGCCCTGCCCGGTGATGTGTCGGCGTTCTTCAGGCCGCTGGTACAGTCCACGGTGGAAACATAGGGAGCGAAATGCGGTCGAACGACCCGA] [+] EMBL BM628260 [CCGCGGTCGCTTAGTACGCATCGCCATTTTCGTCACGTTTTGGGCGTTCGCGCAGAATGACAGTGTGGTTATTGTTGGTGGTGGTGGTAGCAACGCTACTCTACTATTACGTATGGCGCCGCTACCGCTACTGGAGAGACAGAGGCATTGCCGAACTCGACCCATCCTTTCCGCTCGGCGACATGAGGGGTGTGGGAACGACGCGCGGCTTTAACGACATGCTCGATGAAGCGTACGGACGGGTGCGGGGCAAATCGGCAGCAGTCGGGGTATACTTTCTCATCAGCCCGATACTGATCGTGGCCGATCTCGACCTTGCCAAGCAGATACTGGTGAAAGATTTTCACCTGTTCCACGATCGCGGCATGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTTTCGATCGGCGGCGAACGGTGGCGCTACCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAATCAATGTTTATTACGATACGTGAAATTGGAGACGAGTTGCTCGCTTCCTTCGACAAGTATATTGATTGCGGGGACCCGATCGATATCAAGTTGCTGTGCCAATGCTTCACCTGCGACGTGGTAAGCTCGTGCG ] [+] EMBL BM575557 [ cCGCTTAGTACGCATCGCCATTTTCGTCACGTTTTGGGCGTTCGCGCAGAATGACAGTGTGGTTGTTGTTGGTGGTGGTGGTAGCAACGCTACTCTACTATTACGTATGGCGCCGCTACCGCTACTGGAGAGACAGAGGCATTGCCGAACTCGACCCATCCTTTCCGCTCGGCGACATGAAGGGTGTGGGAACGACGCGCGGCTTTAACGACATGCTCGATGAAGCGTACGGACGGGTGCGGGGCAAATCGGCAGCAGTCGGGGTATACTTTCTCATCAGCCCGATACTGATCGTGGCCGATCTCGACCTTGCCAAGCAGATACTGGTGAAAGATTTTCACCTGTTCCACGATCGCGGCATGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTCTCGATCGGCGGCGAACGGTGGCGCTACCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAATCAATGTTTATTACGATACGTGAAATTGGAGACGAGTTGCTCGCCTGCTTCGACAAGTATATTGATTGCGGGGACCCGATCGATATCAAGTTACTGTGCCAGTGCTTCACCTGCGACGTGGTAAGCTCGTGTGCCTTATGGGCTGC ] [+] EMBL BM648631 [ ccgCGACGCGAGGCTTTAACGACATGCTCGATGAAGCGTACGGAAGGGTGCGGGGCAAATCGGCAGCAGTCGGGGTATACTTTCTCATCAGCCCGATACTGATCGTGGCCGATCTCGACCTTGCCAAGCAGATACTGGTGAAAGATTTTCACCTGTTCCACGATCGCGGCATGTACGTGAACGAGCGGGACGATCCCCTGTCCGGGCATCTGTTCTCGATCGGCGGCGAACGGTGGCGCTACCTGCGCAACAAGCTCAGCCCCACGTTCACGTCCGGCAAGATCAAATCAATGTTTTTTACGATACGTGAAATTGGAGACGAGTTGCTCGCCTGCTTCGACAAGTATATTGATTGCGGGGACCCGATCGATATCAAGTTACTGTGCCAGTGCTTCACCTGCGACGTGGTAGGCTCGTGCGCCTT TGGGCTGCAGTGTAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATCGGCGACAAGGTGTTCCGGGCAAGCCCAATGCGTATGGTGTACTCTATGGCGATCGGGATCTTTCCGCGGCTTTCGCGAGCCCTCCGACTGCCCGCCCTGCCCGGTGATGTGTCGGCGTTCTTCAGGCCGCTGGTACAGTCCACGGTGGAAACATAGGGAGCGAAATGCGGTCGAACGACCCGA] consensusID : consensus_9563#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 416 fasta sequence [CCCGAGGTTAACGATATCAAGTTGCTGTGCCAATGCTTCACCTGCGACGTGGCTAGGCTCGTGCGCCTTTGGGCTGCAGTGCAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATCGGCGACAAGGTGTTTCGGGTGAGTCCACTGCGTATGTTGTACTCGATGGCGATCGGGATCTTTCCGCGGCTTTCGCGAGCCCTCCGACTGCCCGCCCTGCCCGGTGATGTGTCGGCGTTCTTCAGACCACTGGTACAGTCCACGGTGGAACATAGGGAGCGAAATGCGGTCGAACGACCCGATTTTCTTAACCTGCTGATACAGCTCAAGAACAAAGGTACGGTGGAGGACGAAGCAACAGAAGAACTGCAAAAGCTGACGCTCGACGAGGTGGCAGCGCAGGCGTTCGTGTTCT] [+] EMBL AL692639 [CCCGAGGTTAACGATATCAAGTTGCTGTGCCAATGCTTCACCTGCGACGTGGCTAGGCTCGTGCGCCTTTGGGCTGCAGTGCAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATCGGCGACAAGGTGTTTCGGGTGAGTCCACTGCGTATGTTGTACTCGATGGCGATCGGGATCTTTCCGCGGCTTTCGCGAGCCCTCCGACTGCCCGCCCTGCCCGGTGATGTGTCGGCGTTCTTCAGACCACTGGTACAGTCCACGGTGGAACATAGGGAGCGAAATGCGGTCGAACGACCCGATTTTCTTAACCTGCTGATACAGCTCAAGAACAAAGGTACGGTGGAGGACGAAGCAACAGAAGAACTGCAAAAGCTGACGCTCGACGAGGTGGCAGCGCAGGCGTTCGTGTTCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9563#0 CCGGCCGGTGGTCGGGAGCAGATCGAATTGTGTTACTAGACTTGGTCGCGTCCAGGCAAC 60 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ----------------------CCGCGGTCGCTTAGTACGCATCGCCATTTTC--GTCAC 36 consensus_9563#0 AATCTGTGCGCCATGGGTTACGTCAGTGTTGTGTTGTTTCTGGTGGTCCCCGCGCTCACC 120 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 GTTTTGGGCGTT-CGCGCAGAATGACAGTGTGGTTATTGTTGGTGGTGGTGGTAGCAACG 95 consensus_9563#0 CTGCTTTACATATACTTGAAGCAGCACTACCGTCATTGGGCAAATCGGAACCTACCCCAG 180 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 CTACTCTACTATTACGTATGGCGCCGCTACCGCTACTGGAGAGACAGAGGCATTGCCGAA 155 consensus_9563#0 CTGGAAGCGTCCTTCCCGCTGGGCAACATGAAGGGCGTCGGGTCCGAGATTCACTTCAAC 240 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 CTCGACCCATCCTTTCCGCTCGGCGACATGAGGGGTGTGGGAACGACGCGCGGCTTTAAC 215 consensus_9563#0 GATGTGCTGAACGAAGCGTACGCAAAAGGTAAAGCACAGTCGGCCCCACTCGTCGGGCTG 300 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 GACATGCTCGATGAAGCGTACGGACGGGTGCGGGGCAAATCGGCAGCA---GTCGGGGTA 272 consensus_9563#0 TACTTTATGCTCAAGCCCATACTGATCGTGACCGAGCTGGACATGGTGAAGCGCATACTG 360 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 TACTTTCTCATCAGCCCGATACTGATCGTGGCCGATCTCGACCTTGCCAAGCAGATACTG 332 consensus_9563#0 GTGAAAGACTTTAGCAGCTTCCACGACCGTGGCCTGTACGTGAACGAGCGGGACGATCCC 420 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 GTGAAAGATTTTCACCTGTTCCACGATCGCGGCATGTACGTGAACGAGCGGGACGATCCC 392 consensus_9563#0 CTGTCCGGGCATCTGTTTGCGCTGGACGGTGAGCGGTGGCGCTATCTGCGCAACAAGCTC 480 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 CTGTCCGGGCATCTGTTCTCGATCGGCGGCGAACGGTGGCGCTACCTGCGCAACAAGCTC 452 consensus_9563#0 AGCCCCACGTTCACGTCCGGCAAGATCAAGCTGATGTTCAGCACGATTTGCGAGATCGGT 540 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 AGCCCCACGTTCACGTCCGGCAAGATCAAATCAATGTTTATTACGATACGTGAAATTGGA 512 consensus_9563#0 GACGAGTTTCTGGCCACGGTGAATCGGTTCGTCGAGCGGGATGAGCCGTTGGATGTGAAG 600 consensus_9563#2 ----------------------------------CCCGAGGTTAAC-----GATATCAAG 21 consensus_9563#1 GACGAGTTGCTCGCCTGCTTCGACAAGTATATTGATTGCGGGGACCCGATCGATATCAAG 572 * * * * *** * *** consensus_9563#0 CTGCTGTCACAGTGCTTCACCTGCGACGTGG-TAGGCTCGTGCGCGTT-CGGGCTGCAGT 658 consensus_9563#2 TTGCTGTGCCAATGCTTCACCTGCGACGTGGCTAGGCTCGTGCGCCTT-TGGGCTGCAGT 80 consensus_9563#1 TTACTGTGCCAGTGCTTCACCTGCGACGTGG-TAAGCTCGTGCGCCTTATGGGCTGCAGT 631 * **** ** ******************* ** ********** ** ********** consensus_9563#0 GCAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATTGGCGACAAGGTGTTTAAAC 718 consensus_9563#2 GCAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATCGGCGACAAGGTGTTTCGGG 140 consensus_9563#1 GTAACTCGCTCAAAAACGGAGGCTCCAAGCTGCTCGAGATCGGCGACAAGGTGTTCCGGG 691 * ************************************** ************** consensus_9563#0 CACCAGCGTGGCGAAATATGCTCGCGTTTGCGCTCATCTCGTTTAAGAAGCTGGCGAAAC 778 consensus_9563#2 TGAGTCCACTGCGTATGTTGTACTCGATGGCGATCGGGATCTTTCCGCGGCTTTCGCGAG 200 consensus_9563#1 CAAGCCCAATGCGTATGGTGTACTCTATGGCGATCGGGATCTTTCCGCGGCTTTCGCGAG 751 * *** * ** * * * *** ** *** * *** ** * consensus_9563#0 GATTGCGCCTACCCGTGCTACCGGGCGAGGTGACGTCATTCTTTATGCCGCTTGTCACCG 838 consensus_9563#2 CCCTCCGACTGCCCGCCCTGCCCGGTGATGTGTCGGCGTTCTTCAGACCACTGGTACAGT 260 consensus_9563#1 CCCTCCGACTGCCCGCCCTGCCCGGTGATGTGTCGGCGTTCTTCAGGCCGCTGGTACAGT 811 * ** ** **** ** ** ** ** *** ** * ***** * ** ** ** consensus_9563#0 AGACGGTGGCG-GATCGGGAACGGAACTCGATCGAACGGCCCGATTTTCTCAATCTGCTG 897 consensus_9563#2 CCACGGTGGAA-CATAGGGAGCGAAATGCGGTCGAACGACCCGATTTTCTTAACCTGCTG 319 consensus_9563#1 CCACGGTGGAAACATAGGGAGCGAAATGCGGTCGAACGACCCGA---------------- 855 ******* ** **** ** ** ** ******* ***** consensus_9563#0 ATACAGCTCAAGAACAAAGGTACGGTCGAGGACGAAACAACGGAGGGACTGCAAAAGCTG 957 consensus_9563#2 ATACAGCTCAAGAACAAAGGTACGGTGGAGGACGAAGCAACAGAAGAACTGCAAAAGCTG 379 consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 ACGCTCGACGAGGTGGCAGCGCAGGCGTTTGTGTTCTTCTTCGCCGGGTTCGAAACGTCC 1017 consensus_9563#2 ACGCTCGACGAGGTGGCAGCGCAGGCGTTCGTGTTCT----------------------- 416 consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 TCGACAACGCTCTCGTTCGCACTGTTCGAGTTGGCCAACAATCCCGACATTCAGGAGCGA 1077 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 GTGCGGGCGGAGATGCTGGAAAAGCTTCAACTCCACGACGGCAAGATAACGTACGACGCC 1137 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 CTGAAGGAGATGACGTACCTCGATCAGGTCATCAATGAGACACTTCGTATGTATCCGCCA 1197 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 GTTCCGCAGCTGATACGCGTCACCACTCAACCGTACAAGGTGGAGGGAGCGAACGTATCG 1257 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 CTCGAGCCCGACACGATGCTGATGATACCGATCTACGCGATACATCACGATGCCAGCATC 1317 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 TATCCCGACCCGGAACGTTTCGATCCGGATCGGTTTGCACTGGCCGCGACGCACGCAAGG 1377 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 CACACTCACGCGTTCCTGCCGTTCGGCGATGGGCCGCGGAATTGCATCGGCATGCGCTTT 1437 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 GGGCTGCTGGAGGTAAAGTTTGGCATCGTGCAGATGGTGAGCAAGCTGCGGTTCACCGTC 1497 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 AGCGAGCGTATGCAGATGCCGCTCCGGATGTCGAAAACGGCCTCCATACTGGAGGCGGAA 1557 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 GGAGGCATTTGGCTTAACGCAACGAAACTGTGAAGCTGTGCCAAGCTGTGCTGACTTATC 1617 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 GCGCCGGTCAATGTTTGATATCTGATAGGAATGACATGTCTATCTGGGGGTCCGGGGGTT 1677 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 TGGCTTTGCCAAACCAATTGTTGCCATATTTTGCTTACTCTTTTAGGTTACTTACTGCTG 1737 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 CAATGATCCCGTCAATATTAGACTGTTTGCAACCGAAGTAAAAAATAAGAAAACTGATAA 1797 consensus_9563#2 ------------------------------------------------------------ consensus_9563#1 ------------------------------------------------------------ consensus_9563#0 AACTATATCGAAATAAACAGGAGTTACTAATCGACATAAAAGTGCAATGCTACGAAG 1854 consensus_9563#2 --------------------------------------------------------- consensus_9563#1 --------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||