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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9573#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1802 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCTCGATACCGGCCAGCACCTACCAGCAGCAGAAGCTGCGCGTCTGCGAAGTCTGCTCGGCCTATCTGGGCATCCACGACAACGACATCCGGCTGGCGGATCACTTTGGCGGTAAGCTACATCTCGGCTTTCTGGCCATTCGCGAAAAGCTGGCAGAGCTGGAGAAGACGGCCGGTCCGCGGCAGAAGGAGCTGCGCAAGACGGGGCGCGACCGGGACCACGAGGATCGGAGCCGATCGCGGTACGTCGGCGGCAGGGAGCTGGATCGGCGTTCCCGTGCGTTGGCCCGCAGCCGTGACCGGAAGGATACGAACCGTGAAATTAAACCGGGTGATGATCGGAAGGATCGGAATGAAGGTCGTGATCGAGATCGCGATCAGCGTGACCGAGGCGATCGTCGCCGGTCGCCCGATCGTAGCAGCCGCCGATCGAGAAGCCGCG-ACCGTAGCCGTGAGCGCGACCGCCACAACGATCGGCACAACGATCG-ACGCC-GGCGGTCCCGGTCACGCGAACGGTCCAGACGGTAAGCATCTATCATTCTGTAGACATCCCAAAACCACACAAAGCAGGTAGTAGCGGATAGGACTGCACAGAGAGCTGATCTGTCCGACGTTCGTGCGTGCTGCAGCCCGCACCCGATTTTAATAAACGCAATGATCGTGCAGACGGCTTCAAAGGTTCAACGGAAAACTCGCGCTCT-TGTTGTGGATGGACCGCGGAACACCGATTAATTTGTAAGCATAGTTCTAACTTCATTATAATTTTTATTCAACCTTACGATATTTGTTTTTCCTAACCTACACGTCGCAAATCGTGCTAATTGGACAGTGTTGTTTAAATGAAACAATCACAGTTAGTT-AAAAAAAAACTTCTTGTAAAATGGAACCAATTTCAATGGAACATCTTGATATTGTTTAAACATTTAATTACACACTCTGTTCCGCTGCGTAGTGTCGATTGCCCGATGGTGAATGTATAAGTTAACACAGAAATGGTACAATAAACCCCATCGATGGGTTATTAGTGCATAACAATTTGCGAGTGTATCGTTGCATCGTGCTGTGTCGTCGCAAATCGCTTTGATTCGGACCCGGAAAGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGAACCACCTCTGAGTATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAAAAATCTTACGTAGTTCG--TAGGGGTAGTCATAATATTCTGAAGGCAAATCAGATCAGTAAAATGGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATACATTGTCCATCGTTTAAAATTAATGTATCCTTGGGGAAGTGGAAGCATGACTTTTTCATCTTTGCATGAAAACGAACGCTTCTATTGCTGTTGCAGGATGGCTAATTTATTTTGGCAACCAATCACCCATTAGGGCTTTGTAAAGT--AAGCACACAGGACACAACTGAAACGCGCAATAGCGAGCGTTTTTCATGTTCGAGCAAAATTCAAATGAAAAAAGTAAAATAGGCATAAGCATTTAAATAACGTTTTATATCAACCATCTGTAAGATCCCCATACAGGTTTTTTCGTAGGTGTATAGAAGAAATAAAATCGAGCATTACGTGTCAAATAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BM645166 [CCGCGGACGCGTGGGCGGACGCGTGGGTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCTCGATACCGGCCAGCACCTACCAGCAGCAGAAGCTGCGCGTCTGCGAAGTCTGCTCGGCCTATCTGGGCATCCACGACAACGACATCCGGCTGGCGGATCACTTTGGCGGTAAGCTACATCTCGGCTTTCTGGCCATTCGCGAAAAGCTGGCAGAGCTGGAGAAGACGGCCGGTCCGCGGCAGAAGGAGCTGCGCAAGACGGGGCGCGACCGGGACCACGAGGATCGGAGCCGATCGCGGTACGTCGGCGGCAGGGAGCTGGATCGGCGTTCCCGTGCGTTGGCCCGCAGCCGTGACCGGAAGGATACGAACCGTGAAATTAAACCGGGTGATGATCGGAAGGATCGGAATGAAGGTCGTGATCGAGATCGCGATCAGCGTGACCGAGGCGATCGTCGCCGGTCGCCCGATCGTAGCAGCCGCCGATCGAGAAGCCGCGAACCGTAGCCGTGAGCGCGACCGCCACAACGATCGGCACAACGATCGAACGCCGGGCGGTCCCGGTCACGCGAACGGTCCAG ]
[+] EMBL BM647621 [ ccgACGACATCCGGCTGGCGGATCACTTTGGCGGTAAGCTACATCTGGGCTTTCTGGCCATTCGCGAAAAGCTGGCAGAGCTGGAGAAGACGGCCGGTCCGCGGCAGAAGGAGCTGCGCAAGACGGGGCGCGACCGGGACCACGAGGATCGGAGCCGATCGCGGTACGTCGGCGGCAGGGAGCTGGATCGGCGTTCCCGTGCGTTGGCCCGCAGCCGTGACCGGAAGGATACGAATCGCGAAATTAAACCGGGTGATGATCGGAAGGATCGGAATGAAGGTCGTGATCGAGATCGCGATCAGCGTGACCGAGGCGATCGTCGCCGGTCGCCCGATCGTAGCAGCCGCCGATCGAGAAGCCGCG ACCGTAGCCGTGAGCGCGACCGCCACAACGATCGGCACAACGATCG ACGCC GGCGGTCCCGGTCACGCGAACGATCCAGACGGTAAGCATCTATCATTCTGTAGACATCCCAAAACCACACAAAGCAGGTAGTAGCGGATAGGACTGCACAGAGAGCTGATCTGTCCGACGTTCGTGCGTGCTGCAGCCCGCACCCGATTTTAATAAACGCAATGATCGTGCAGACGGCTTCAAAGGTTCAACGGAAAACTCGCGCTCT TGTTGTGGATGGACCGCGGAACACCGATTAA ]
[+] EMBL AGA282958 [ AGCCCGCANNNGATTTTAATAAACGCAATGATCGTGCAGACGGCTTCAAAGGTTCAACGGAAAACTCGCGCTCTGTATTGTGGATGGACCGCGGATCACCGATTAATTTGTAAGCATAGTTCTAACTTCATTATAATTTTTATTCAACCTTACGATATTTGTTTTTCCTAACCTACACGTCGCAAATCGTGCTAATTGGACAGTGTTGTTTAAATGAAACAATCACAGTTAGTTAAAAAAAAAACTTCTTGTAAAATGGAACCAATTTCAATGGAACATCTTGATATTGTTTAAACATTTAATTACACACTCTGTTCCGCTGCGTAGTGTCGATTTCCCGATGGTGAATGTATAAGTTAACACAGAAATGGTACAATAAACCCCATCGATGGGTTATTAGTGCATAACAATTTGCGAGTGTATCGTTGCAT ]
[+] EMBL BM633331 [ ccgGTTTTTCTTAACCTACACGTCGCAAATTTTGCTAATTGGACAGTGTTGTTTAAATGAAACAATCACAGTTAGTT AAAAAAAAACTTCTTGTAAAATGGAACCAATTTCAATGGAACATCTTGATATTGTTTAAACATTTAATTACACACTCTGTTCCGCTGCGTAGTGTCGGTTGCTTGATGGTGAATGTATAAGTTAACACAGAAATGGTACAATATACCCCATCGATGGGTTATTAGTGCATAACAATTTGCGAGTGTATCGTTGCATCGTGCTGTGTCGTCGCAAATCGCTTTGATTCGGACCCGGAAAGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGAACCACCTCTGAGTATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAAAAATCTTACGTAGTTCG TAGGGGTAGTCATAATATTCTGAAGGCAAATCAGATCAGTAAAATGGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATACATTGTCCATCGTTTAAAA TAATGTATCCTTGGGGAAGTGGAAGCATGACTTTTTCATCTTTGCATGAAAACGAACGCTTGTATTGCTG ]
[+] EMBL BX614620 [ CAGTTAGTT AAAAAAAAACTTCTTGTAAAATGGAACCAATTTCAATGAAACATCTTGATATTGTTTAAACATTTAATTACACACTCTGTTCCGCTGCGTAGT TTTATTGCCCGGTGGTGAATGTATAAGTTAACACAGAAATGGTACAATAAACCCCATCGATGGGTTATTAGTGCATAACAATTTGCGAGTGTATCGTTGCATCGTGCTGTGTCGTCGCAAATCGCTTTGATTCGGACCCGG AGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGAACCATCTCTGAGTATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAAAAATCTTACGTAGTCCGTATAGGGGTAGTCATAATATTCTGAAGGCAAATCAGATCAGTAAAATGGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTC ]
[+] EMBL BX609043 [ TTAAACATTTAATTACACACTCTGTTCCGCTTCGTAGT TTTATTGCCCGGTGGTGAATGTATAAGTTAACACAGAAATGGTACAATAAACCCCATCGATGGGTTATTAGTGCATAACAATTTGCGAGTGTATCGTTGCATCGTGCTGTGTCGTCGCAAATCGCTTTGATTCGGACCCGG AGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGAACCATCTCTGAGTATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAAAAATCTTACGTAGTCCGTATAGGGGTAGTCATAATATTCTGAAGGCAAATCAGATCAGTAAAATGGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATACATTGTCCATCGTTTAAAATTAATGTATCCTTGGGGAAGTGGAAGCATGACTTTTTCATCTTTGCATGAAAACGAACGCTTCTATTGCTGTTGCAGGATGGCTAATTTATTTTGGCAACCAATCACCCATTAGGGCTTTGTAAAGT AAGCACACAGGACACAACTGAAACGCGCAATAGCGAGCGTTTTTCATGTTCGAGCAAAATTCAAATGAAAAAAGTAAAATAGGCATAAGCATTTAAATAACGTTTTATATCAACC ]
[-] EMBL AGA281350 [ GTCGCAAATCGCTTTGATTCGGACCCGGAAAGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGAACCACCTCTGAGTATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAAAAATCTTACGTAGTTCG TAGGGGTAGTCTTAATATTCTGAAGGCAAATCAGATCAGTAAAATGGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATATATTGTCCATCGTTTAAAAATAATGTATCCTTGGGGAAGTGGCAGCATGACTTTTTCATCTTTGCATGAAAACGAACGCTTCTATTACTGTTGCAGGATGGCTAATTTATTTTGGCAACCAATCACCCATCAGGGCTTTGTAAAGTAAAAGCACACAGGACGCAACTGAAACGCGCAATTGCGAGCGTTTTTCATGTTCGAGCAAAATTCAAATGAAAAAAGTAAAATAGGCATAAGCATTTAAATAACGTTTTATATCAACCATCTGTAAGATCCCCATACAGGTTTTTTCGTAGGTGTATAGAAGAAATAAAATCGAGCATTACGTGTCAAATAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BX608015 [ GAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATACATTGTCCATCGTTTAAAATTAATGTATCCTTGGGGAAGTGGAAGCATGACTTTTTCATCTTTGCATGAAAACGAACGCTTCTATTGCTGTTGCAGGATGGCTAATTTATTTTGGCAACCAATCACCCATTAGGGCTTTGTAAAGT AAGCACACAGGACACAACTGAAACGCGCAATAGCGAGCGTTTTTCATGTTCGAGCAAAATTCAAATGAAAAAAGTAAAATAGGCATAAGCATTTAAATAACGTTTTATATCAACCATCTGTAAGATCCCCATACAGGTTTTTTCGTAGGTGTATAGAAGAAATAAAATCGAGCATTA ]
[+] EMBL BX613029 [ TCCGGGATGTGTGTGGTTTTGTTATGTCTAGTTTGAGCTGATTGCCGTCTATGCACGGGCACAACTTATTCACTCAGCCGTGAATCGTAATCCTATCATCAGACATACATGGTCCATCGTGGAAAATTAAGGTATCCTTGGGGAAGTGGAAGCATGACTGAGGCATCTAGGCATGAAAACGAACGCT ]
consensusID : consensus_9573#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 973 fasta sequence
[TCCTGCAAAAATTGTACATTTCCGGCACAAAAAGTGCACCAAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTATGTAAGAGTTTTTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCACGACGTCGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAATAAAAATCATTCCCAATAC---AAAAAACGCAAGATACACACAATAGCCCATACCAGGCAAAATGAGT-AAAAGGGAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGCAGGAAACCACAAGCCGTAAGCAAACCAAAATAATAAAAAAAACCAATTTGTCGAATAACTAGATGTGTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTTCGCTTAGGGGAGGGCCACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTGCTCGTTGCTCTGTAGATTCGTTTCAGCAAGCAAATCGCAATCGCCTGCACCCACTCGCGTTATGATAAGAAACGAACTAGTCCGATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAAGCAACCATCCTTCTTTAACGCACTGATTGATAAGAGAGTCATGATGATGATGATGGTGATGAAGATGATGGGAGAGAATAAGACTGAAGCCGAGTCGTAAGTACACACACTGTACCCAAACTCACATCTCTTGACCGCTACTCAAAGAAATCCTTTAACAGTACATCCTGTCGCCCGCTCATTACCCGCTCTCCAACGATGCCAAGCAGTTTCTAGTTGTCCGACCCATTTGTCCTACCTACCTACCTTTCCCGCGTTACACGCGGTATGGCAAACCGCCCGTCCGGAGGTTTGGTGGTTGC]
[+] EMBL BX611104 [TCCTGCAAAAATTGTACATTTCCGGCACAAAAAGTGCACCAAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTATGTAAGAGTTTTTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCACGACGTCGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAATAAAAATCATTCCCAATAC AAAAAACGCAAGATACACACAATAGCCCATACCAGGCAAAATGAGT AAAAGGGAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGCAGGAAACCACAAGCCGTAAGCAAACCAAAATAATAAAAAAAACCAATTTGTCGAATAACTAGATGTGTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTTCGCTTAGGGGAGGGCCACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTGCTCGTTGCTCTGTAGATTCGTTTCAGCAAGCAAATCGCAATCGCCTGCACCCACTCGCGTTA ]
[-] EMBL CNS08IQ5 [ CTGGCCTCCACCACGTCGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAATAAAAATTATTCCCAATACAAAAAAAAACGCAAAATACACACAATAGCCCATCCCAGGCAAAATGAGTAAAAAGGGAAAGCGGAGGTGCGTGTGCATTCTATTTGGTAAGTTGTG ]
[+] EMBL AGA284502 [ TGCTCGTTGCTCTGTAGATTCGTTCAAGCAAGCAAATCGCAATCGCCTGCACCCACTCGCGTTATGATAAGAAACGAACTAGTCCGATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAAGCAACCATCCTTCTTTAACGCACTGATTGATAAGAGAGTCATGATGATGATGATGGTGATGAAGATGATGGGAGAGAATAAGACTGAAGCCGAGTCGTAAGTACACACACTGTACCCAAACTCACATCTCTTGACCGCTACTCAAAGAAATCCTTTAACAGTACATCCTGTCGCCCGCTCATTACCCGCTCTCCAACGATGCCAAGCAGTTTCTAGTTGTCCGACCCATTTGTCCTACCTACCTACCTTTCCCGCGTTACACGCGGTATGGCAAACCGCCCGTCCGGAGGTTTGGTGGTTGC]
[-] EMBL AGA285806 [ CTAGTCCGATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAAGCAACCATCCTTCTTTAACGCACTGATTGATAAGAGAGTCATGATGATGATGATGGTGATGAAGATGATGGGAGAGAATAAGACTGAAGCCGAGTCGTAAGTACACACACTGTACCCAAACTCACATCTCTTGACCGCTACTCAAAGAAATCCTTTAACAGTACATCCTGTCGCCCGCTCATTACCCGCTCTCCAACGATGCCAAGCAGTTTCTAGTTGTCCGACCCATTTGTCCTACCTACCTACCTTTCCCGCGTTACACGCGGTATGGCAAACCGCCCGTCCGGAGGTTT ]
consensusID : consensus_9573#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 766 fasta sequence
[CCGCCCACGCGTCCGAAACATTTTTGATTTTCAGGTCTTCTTGTTGTCGAATGCGTTCTCTCTCTCTCTCGTGTGCACGCGCGCTGCTCCATCAAGCAAGTTATAAATTCCTATAGTAATTTCAATCTTAACCTATTGTTCCTTTGTTTGATGTGTGCGGTCAGTGCAGCTGAAGACGCATTTCTATGCTGCGTTTAAAGTATTGCCTTTTTACAATAAGATAGCGTTAAAAAGTTTAGTTGAGTTTCCTTTTTTTTTTGTCTTTTTGGCTGCGTGTTTGTCTGTGCCTCCTGTACTAAACGATCGAGTGTTTCGTTTCTTTCCTTCTCTTCCATCTTTCCTTCGTTCTTCGTTCTTTTGTACGTGACGTCACTGTGTGTGTCCGTGTGTCTGTAGCGTATGGACCTTGGCGAGTGTCCTAAGGTGCACGATCTGGCCCTGCGAGCGGACTACGAAAATGCATCAAAGAACAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGATCGTCGCACGGAGGCGGCCAAGAAACGGCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAGGTGGCCGCCAAAGCGAACGCAGTGCACGAGCTGGCGGAGGAAATCGGTAAGAAACTTGCTAAAGCGGAGGCTCTAGGTGAGGCGGGACAGGTGGAGGAAAGCATGAAGCTGATGTCGGAGATCGAGGAGCTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCT]
[+] EMBL BM611966 [CCGCCCACGCGTCCGAAACATTTTTGATTTTCAGGTCTTCTTGTTGTCGAATGCGTTCTCTCTCTCTCTCGTGTGCACGCGCGCTGCTCCATCAAGCAAGTTATAAATTCCTATAGTAATTTCAATCTTAACCTATTGTTCCTTTGTTTGATGTGTGCGGTCAGTGCAGCTGAAGACGCATTTCTATGCTGCGTTTAAAGTATTGCCTTTTTACAATAAGATAGCGTTAAAAAGTTTAGTTGAGTTTCCTTTTTTTTTTGTCTTTTTGGCTGCGTGTTTGTCTGTGCCTCCTGTACTAAACGATCGAGTGTTTCGTTTCTTTCCTTCTCTTCCATCTTTCCTTCGTTCTTCGTTCTTTTGTACGTGACGTCACTGTGTGTGTCCGTGTGTCTGTAGCGTATGGACCTTGGCGAGTGTCCTAAGGTGCACGATCTGGCCCTGCGAGCGGACTACGAAAATGCATCAAAGAACAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGATCGTCGCACGGAGGCGGCCAAGAAACGGCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAGGTGGCCGCCAAAGCGAACGCAGTGCACGAGCTGGCGGAGGAAATCGGTAAGAAACTTGCTAAAGCGGAGGCTCTAG ]
[+] EMBL BX617584 [ CCTTCTCTTCCATCTTTCCTTCGTTCTTCGTTCTTTTGTACGTGACGTCACTGTGTGTGTCCGTGTGTCTGTAGCGTATGGACCTTGGCGAGTGTCCGAAGGTGCACGATCTGGCCCTGCGAGCGGACTACGAAAATGCATCAAAGAATAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGATCGTCGCACGGAGGCGGCCAAGAAACGGCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAGGTGGCCGCCAAAGCGAACGCAGTGCACGAGCTGGCGGAGGAAATCGGTAAGAAACTTGCTAAAGCGGAGGCTCTAGGTGAGGCGGGACAGGTGGAGGAAAGCATGAAGCTGATGTCGGAGATCGAGGAGCTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCT]
consensusID : consensus_9573#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence
[CCGGTGTGTTTTGCTTGGGTGGCGCATAGTTTTTCCTGAATTTTCCTGCAAAAACTGTACATTTCCCGCACAAAAAGTGCACCGAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTATGTAAGAGTTT-TTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCACGCGTATGGACCTTGGCGAGTGTCCTAAGGTGCACGATCTGGCCCTGCGAGCGGACTACGAAAATGCATCAAAGAACAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGATCGTCGCACGGAGGCGGCCAAGAAACGGCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAGGTGGCCGCCAAAGCGAACGCAGTGCACGAGCTGGCGGAGGAAATCGGTAAGAAACTTGCTAAAGCGGAGGCTCTAGGTGAGGCGGGACAGGTGGAGGAAAGCATGAAGCTGATGTCGGAGATCGAGGAGCTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCTCGATACCGGGCAGCACCTACCAGCAGCAGAAGCTGCGCGTC]
[+] EMBL BM648183 [CCGGTGTGTTTTGCTTGGGTGGCGCATAGTTTTTCCTGAATTTTCCTGCAAAAACTGTACATTTCCCGCACAAAAAGTGCACCGAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTATGTAAGAGTTT TTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCACGCGTATGGACCTTGGCGAGTGTCCTAAGGTGCACGATCTGGCCCTGCGAGCGGACTACGAAAATGCATCAAAGAACAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGATCGTCGCACGGAGGCGGCCAAGAAACGGCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAGGTGGCCGCCAAAGCGAACGCAGTGCACGAGCTGGCGGAGGAAATCGGTAAGAAACTTGCTAAAGCGGAGGCTCTAGGTGAGGCGGGACAGGTGGAGGAAAGCATGAAGCTGATGTCGGAGATCGAGGAGCTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGTATCGCAGCTCGATACCGGGCAGCACCTACCAGCAGCAGAAGCTGCGCGTC]
[+] EMBL BX466150 [ gcaagaatCCGCAC GATTG GAACCAAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTATGTAAGAGTTTCTTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCACGCGTATGGACCTTGGCGAATGTCCTAAGGTGCACGATCTGGCCCTGCGAGCAGACTACGAGAACGCATCAAAGAATAAGGACTACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGAC ]
consensusID : consensus_9573#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 649 fasta sequence
[ATCGCCGAGTTACTGCTCCTGTTACTTATCTTTCCCACTCTGTTCGGTTCTGTTCTATTTTTTACAGACGTCGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAATAAAAATCATTCCCAATACAAAAAACGCAAGATACACACAATAGCCCATACCAGGCAAAATGAGTAAAAGGGAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGCAGGAAACCACAAGCCGTAAGCAAACCAAAATAATAAAAAAAACCAATTTGTCGAATAACTAGATGTGTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTTCGCTTAGGGGAGGGCCACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTGCTCGTTGCTCTGTAGATTCGTTCAAGCAAGCAAATCGCAATCGCCTGCACCCACTCGCGTTATGATAAGAAACGAACTAGTCCGATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAAGCAACCATCCTTCTTTAACGCACTGTACCCAAACTCACATCTCTTGACCGCTACTCAAAGAAATCCTTTAACAGTACATCCTGTCGCCCGCTCATTACCCGCTCTCCAACGATGCCAAGCAG]
[+] EMBL AL932959 [ATCGCCGAGTTACTGCTCCTGTTACTTATCTTTCCCACTCTGTTCGGTTCTGTTCTATTTTTTACAGACGTCGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAATAAAAATCATTCCCAATACAAAAAACGCAAGATACACACAATAGCCCATACCAGGCAAAATGAGTAAAAGGGAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGCAGGAAACCACAAGCCGTAAGCAAACCAAAATAATAAAAAAAACCAATTTGTCGAATAACTAGATGTGTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTTCGCTTAGGGGAGGGCCACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTGCTCGTTGCTCTGTAGATTCGTTCAAGCAAGCAAATCGCAATCGCCTGCACCCACTCGCGTTATGATAAGAAACGAACTAGTCCGATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAAGCAACCATCCTTCTTTAACGCACTGTACCCAAACTCACATCTCTTGACCGCTACTCAAAGAAATCCTTTAACAGTACATCCTGTCGCCCGCTCATTACCCGCTCTCCAACGATGCCAAGCAG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 CCGCGGACGCGTGGGCGGACGCGTGGGTGCGGTCGGAGAAGACGCGCGCCGAGCAGGAGT 60
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 ATCGCAGCTCGATACCGGCCAGCACCTACCAGCAGCAGAAGCTGCGCGTCTGCGAAGTCT 120
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 GCTCGGCCTATCTGGGCATCCACGACAACGACATCCGGCTGGCGGATCACTTTGGCGGTA 180
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 AGCTACATCTCGGCTTTCTGGCCATTCGCGAAAAGCTGGCAGAGCTGGAGAAGACGGCCG 240
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 GTCCGCGGCAGAAGGAGCTGCGCAAGACGGGGCGCGACCGGGACCACGAGGATCGGAGCC 300
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 GATCGCGGTACGTCGGCGGCAGGGAGCTGGATCGGCGTTCCCGTGCGTTGGCCCGCAGCC 360
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 GTGACCGGAAGGATACGAACCGTGAAATTAAACCGGGTGATGATCGGAAGGATCGGAATG 420
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 AAGGTCGTGATCGAGATCGCGATCAGCGTGACCGAGGCGATCGTCGCCGGTCGCCCGATC 480
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 GTAGCAGCCGCCGATCGAGAAGCCGCGACCGTAGCCGTGAGCGCGACCGCCACAACGATC 540
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 GGCACAACGATCGACGCCGGCGGTCCCGGTCACGCGAACGGTCCAGACGGTAAGCATCTA 600
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 --------------------TCCTGCAAAAATTGTACATTTCCGGCACAAAAAGTGCACC 40
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 TCATTCTGTAGACATCCCAAAACCACACAAAGCAGGTAGTAGCGGATAGGACTGCACAGA 660
consensus_9573#2 -----------------------------------------------CCGCCCACGCGTC 13
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 AAAGCGAGCGGCAACATGTCGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATG 100
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 GAGCTGATCTGTCCGACGTTCGTGCGTGCTGCAGCCCGCACCCGATTTTAATAAACGCAA 720
consensus_9573#2 CGAAACATTTTTGATTTTCAGGTCTTCTTGTTGTCGAATGCGTTCTCTCTCTCTCTCGTG 73
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 GGAACAGCTAGAAATGGCGAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAAAGTA 160
consensus_9573#4 ------------------------------------------ATCGCCGA-GTTACTGCT 17
consensus_9573#0 TGATCGTGCAGACGGCTTCAAAGGTTCAACGGAAAACTCGCGCTCTTGTTGTGGATGGAC 780
consensus_9573#2 TGCACG----CGCGCTGCTCCATCAAGCAAGTTATAAATTCCTATAGTAATTTCAATCTT 129
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 TGTAAG----AGTTTTTTATTAGGCTGCTGCCCGCACGAGATCCTGGCCTCCAC-GACGT 215
consensus_9573#4 CCTGTT----ACTTATCTTTCCCACT-CTGTTCG-GTTCTGTTCTATTTTTTACAGACGT 71
consensus_9573#0 CGCGGAACACCGATTAATTTGTAAGCATAGTTCTAACTTCATTATAATTTTTATTCAACC 840
consensus_9573#2 AACCTATTGTTCCTTTGTTTGATGTGTGCGGTCAGTGCAGCTGAAGACGCATTTCTATGC 189
consensus_9573#3 ---------CCGGTGTGTTTTGCTTGGGTGGC--GCATAGTTTTTCCTGAATTTTCCTGC 49
consensus_9573#1 CGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAA-TAAAAATCATTCCCAATAC 274
consensus_9573#4 CGGTCACAACACGTCGCTTTTTCCTCACAATTTCAAGCAA-TAAAAATCATTCCCAATAC 130
consensus_9573#0 TTACGATATTTGTTTTTCCTAACCTACACGTCGCAAATCGTGCTAATTGGACAGTGTTGT 900
* * * *
consensus_9573#2 TGCGTTTAAAGTAT-TGCCTTTTTACAATAAGATAGCGTTAAAAAGTTTAGTTGAGTTT- 247
consensus_9573#3 AA-----AAACTGT-ACATTTCCCGCACAAAAAGTGCACCGAAGCGAGCGGCAACATGT- 102
consensus_9573#1 AA-----AAAACGC-AAGATACACACAATA-GCCCATACCAGGCAAAATGAGTAAAAGG- 326
consensus_9573#4 AA-----AAAACGC-AAGATACACACAATA-GCCCATACCAGGCAAAATGAGTAAAAGG- 182
consensus_9573#0 TTAAATGAAACAATCACAGTTAGTTAAAAAAAAACTTCTTGTAAAATGGAACCAATTTCA 960
*** * * *
consensus_9573#2 -CCTTTTTTTTTTGTCTTTTTG-GCTGCGTGTTTGTCTG-TGCCTCCTGTACTAAACGAT 304
consensus_9573#3 -CGGCACACGATCAAATGCGGGCAATGCTTGATCAGCTGATGGGAACAGCTAGAAATGGC 161
consensus_9573#1 -GAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGC 385
consensus_9573#4 -GAAAGCGAAGGTGCGTGTGCATTCTATTTGGTAAGTTGTGCTATCTCGCAGCGAAGCGC 241
consensus_9573#0 ATGGAACATCTTGATATTGTTTAAACATTTAATTACACACTCTGTTCCGCTGCGTAGTGT 1020
* * * * *
consensus_9573#2 CGAGTGTTTCGTTTCTT--TCCTTCTCTTCCATCTTTC-CTTCGTTCTTCGTTCTTTTGT 361
consensus_9573#3 GAAACCAATCGGTACTCGGTCAAGTTCTACGACAGCAA-AGTATGTAAGAGTTTTTTATT 220
consensus_9573#1 AGGAAACCACAAGCCGTAAGCAAA--CCAAAATAATAA-AAAAAACCAAT-TTGTCGAAT 441
consensus_9573#4 AGGAAACCACAAGCCGTAAGCAAA--CCAAAATAATAA-AAAAAACCAAT-TTGTCGAAT 297
consensus_9573#0 CGATTGCCCGATGGTGAATGTATAAGTTAACACAGAAATGGTACAATAAACCCCATCGAT 1080
* *
consensus_9573#2 ACGTGACGTCACTGTGTGTGTCCGTGTGTCTGTAGCGTATGGACCTTGGCGAGT-GTCCT 420
consensus_9573#3 AGGCTGCTGC-CCGCACGAGATCCTGGCCTCCACGCGTATGGACCTTGGCGAGT-GTCCT 278
consensus_9573#1 AACTAGATGT-GTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTT-CGCTT 499
consensus_9573#4 AACTAGATGT-GTGCATGTTGCCCTATATGCATATAAAGCAAACTTTCATCTTT-CGCTT 355
consensus_9573#0 GGGTTATTAG--TGCATAACAATTTGCGAGTGTATCGT-TGCATCGTGCTGTGTCGTCGC 1137
* * * * * *
consensus_9573#2 AAGGTGCAC-GATCTGGCCCTGCGAGCGGACTACGAAA-ATGCATCAAAGAACAAGGACT 478
consensus_9573#3 AAGGTGCAC-GATCTGGCCCTGCGAGCGGACTACGAAA-ATGCATCAAAGAACAAGGACT 336
consensus_9573#1 AGGG--GAG-GGCC--ACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTG 554
consensus_9573#4 AGGG--GAG-GGCC--ACCCCGCGACCACACGGTATCGCGTGCGGCCGCCATCGTCGTTG 410
consensus_9573#0 AAATCGCTTTGATTCGGACCCGGAAAGAGAGAGAGAGAGGGAGATCAACTGAATTGGCGA 1197
* * ** * * * * *
consensus_9573#2 ACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGA-TCGT 537
consensus_9573#3 ACTACTATGACGTTGATGCAATGGAACATCTGCAAGCCTTCATCGCGGACTGCGA-TCGT 395
consensus_9573#1 CTCGTTGCTCTGTAGATTCGTTTCAGCA--AGCAAATCGCAATCGCCTGCACCCACTCGC 612
consensus_9573#4 CTCGTTGCTCTGTAGATTCGTTCAAGCA--AGCAAATCGCAATCGCCTGCACCCACTCGC 468
consensus_9573#0 ACCACCTCTGAGT--ATGTATTGCAAAGCGTGTAAATGCAGAATTATAGCAACAA-AAAT 1254
** ** * * * ** * * * *
consensus_9573#2 CGCACGGAGGCGGCCAAG--AAACG-GCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAG 594
consensus_9573#3 CGCACGGAGGCGGCCAAG--AAACG-GCTCGCCGAAACGCAGGAGGAGCTAACAGCCGAG 452
consensus_9573#1 GTTATGATAAGAAACGAACTAGTCC-GATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAA 671
consensus_9573#4 GTTATGATAAGAAACGAACTAGTCC-GATGGTCGCGACCGGTTTGTTGTCCGCCCGCAAA 527
consensus_9573#0 CTTACGTAGTTCGTAGGGGTAGTCATAATATTCTGAAGGCAAATCAGATCAGTAA--AAT 1312
* * * * * * * *
consensus_9573#2 GTGGCCG-CCAAAGCGAACGCAGT---GCACGAGCTGGCGGAGGAAAT-CGGTAAGAAAC 649
consensus_9573#3 GTGGCCG-CCAAAGCGAACGCAGT---GCACGAGCTGGCGGAGGAAAT-CGGTAAGAAAC 507
consensus_9573#1 GCAACCATCCTTCTTTAACGCACT---GATTGATAAGAGAGTCATGAT-GATGATGATGG 727
consensus_9573#4 GCAACCATCCTTCTTTAACGCACT---G-------------------------------- 552
consensus_9573#0 GGGGCTTTTTGGAGTTTTTGAACTATCGTCCGGGATGTGTGTGGTTTTGTTATGTCTAGT 1372
* * * * * *
consensus_9573#2 TTGCTAAAGCG------GAGGCTCTAGGTGAGGCGGGACAGGTGGA-GGAAAGCATGAAG 702
consensus_9573#3 TTGCTAAAGCG------GAGGCTCTAGGTGAGGCGGGACAGGTGGA-GGAAAGCATGAAG 560
consensus_9573#1 TGATGAAGATGATGGGAGAGAATAAGACTGAAGCCGAGTCGTAAGT-ACACACACTGTAC 786
consensus_9573#4 ---------------------------------------------------------TAC 555
consensus_9573#0 TTGAGCTGATTGCCGTCTATGCACTGGCACAACTGATTCACTCAGCCGTGAATCGTAATC 1432
consensus_9573#2 CTGATGTCGGAGAT-CGAGGAGCTGCGGTCGGAGAAGACGCGCGCC-----GAGCAGGAG 756
consensus_9573#3 CTGATGTCGGAGAT-CGAGGAGCTGCGGTCGGAGAAGACGCGCGCC-----GAGCAGGAG 614
consensus_9573#1 CCAAACTCACATCT-CTTG-ACCGCTACTCAAAGAAATCCTTTAAC-----AGTACATCC 839
consensus_9573#4 CCAAACTCACATCT-CTTG-ACCGCTACTCAAAGAAATCCTTTAAC-----AGTACATCC 608
consensus_9573#0 CTATCATCAGACATACATTGTCCATCGTTTAAAATTAATGTATCCTTGGGGAAGTGGAAG 1492
* ** * * * * * *
consensus_9573#2 TATCGCA-GCT------------------------------------------------- 766
consensus_9573#3 TATCGCA-GCTCGATACCGGG-CAGCACCTAC----CAGCAGCAGAAGCTGCGCGTC--- 665
consensus_9573#1 TGTCGCCCGCTCATTACCCGCTCTCCAACGAT----GCCAAGCAGTTTCTAGTTGTCCGA 895
consensus_9573#4 TGTCGCCCGCTCATTACCCGCTCTCCAACGAT----GCCAAGCAG--------------- 649
consensus_9573#0 CATGACTTTTTCATCTTTGCATGAAAACGAACGCTTCTATTGCTGTTGCAGGATGGCTAA 1552
* * *
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 CCCATTTGTCCTACCTACCTACCTTTCCCGCGTTACACGCGGTATGGCAAACCGCCCGTC 955
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 TTTATTTTGGCAACCAATCACCCATTAGGGCTTTGTAAAGTAAGCACACAGGACACAACT 1612
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 CGGAGGTTTGGTGGTTGC------------------------------------------ 973
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 GAAACGCGCAATAGCGAGCGTTTTTCATGTTCGAGCAAAATTCAAATGAAAAAAGTAAAA 1672
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 TAGGCATAAGCATTTAAATAACGTTTTATATCAACCATCTGTAAGATCCCCATACAGGTT 1732
consensus_9573#2 ------------------------------------------------------------
consensus_9573#3 ------------------------------------------------------------
consensus_9573#1 ------------------------------------------------------------
consensus_9573#4 ------------------------------------------------------------
consensus_9573#0 TTTTCGTAGGTGTATAGAAGAAATAAAATCGAGCATTACGTGTCAAATAAAAAAAAAAAA 1792
consensus_9573#2 ----------
consensus_9573#3 ----------
consensus_9573#1 ----------
consensus_9573#4 ----------
consensus_9573#0 AAAAAAAAAA 1802
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||