These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9578#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1410 fasta sequence [CCGGCAGATGGGCATTCCGGCCGGGCGCATTATCTTCTCGAACGTGGCCGCCAAGGAGGAGCACGTGCGACGGGGTCAGCTGGCGGACGTCTGCTTGGATACGCCGCTCTGCAACGGACACACCACCTCGATGGATGTGCTCTGGACCGGAACGCCGGTCGTAACGCTGCCGGCAGAAACGCTAGCGTCCAGAGTTGCCGCATCGCAGCTGGCAACGCTGGGCTGCCCGGAACTGATCGCCAAATCGCGGCAAGAGTATCAGGACATCGCGATCAAACTCGGTACCGACCGGGAGTACCTAAAGGCGATGCGTGCCAAGGT-TGGGTAGCCCGCTGCGAAAGTCCGCTGTTCGACTGCAAGCAGTACGCGCAGGGACTGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGCGAACGACCCGATCACATTTCCGCGAAGGACAAGTAGATTCGCTGGCGTAGTAGTGGTGTAGGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGGTGTGAAAGATTGAAAACAGACAGAGGTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTCCTACTTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGAAGACAGGAA--AA-GAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT-GTC--GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA-GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAATGGTTTACAATTACTTTAAACAAAA] [+] EMBL BM594596 [CCGGCAGATGGGCATTCCGGCCGGGCGCATTATCTTCTCGAACGTGGCCGCCAAGGAGGAGCACGTGCGACGGGGTCAGCTGGCGGACGTCTGCTTGGATACGCCGCTCTGCAACGGACACACCACCTCGATGGATGTGCTCTGGACCGGAACGCCGGTCGTAACGCTGCCGGCAGAAACGCTAGC ] [+] EMBL BX609462 [ CGATGGATGTGCTCTGGACCGGAACGCCGGTCGTAACGCTGCCGGCAGAAACGCTAGCGTCCAGAGTTGCCGCATCGCAGCTGGCAACGCTGGGCTGCCCGGAACTGATCGCCAAATCGCGGCAAGAGTATCAGGACATCGCGATCAAACTCGGTACCGACCGGGAGTACCTAAAGGCGATGCGTGCCAAGGT TGGGTAGCCCGCTGCGAAAGTCCGCTGTTCGACTGCAAGCAGTACGCGCAGGGACTGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGCGAACGACCCGATCACATTTCCGCGAAGGACAAGTAGATTCGCTGGCGTAGTAGTGGTGTAGGG GAAGTCCTTCACTTGGGTGAACTGTGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGATTGAAAGCAGACAGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAATATTTTCTTACTTTAAGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAA ] [+] EMBL BM643692 [ cCGATCAAACTCGGTACCGACCGGGAGTACCTAAAGGCGATGCGTGCCAAGGTGTGGGTAGCCCGCTGCGAAAGTCCCCTGTTCGACTGCAAGCAGTACGCGCAGGGTCTGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGCGAACGACCCGATCA ] [+] EMBL CNS08KN3 [ TGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGCGAACGACCCGATCACATTTCCGCGAAGGACAAGTAAATTCGCTGGCGTAGTAGTGGTGTAGGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGGTGTGAAAGATTGAAAACAGACAGAGGTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTCCTACTTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTCTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGAAGACATGAA AA GAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGCGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGATCCATCAGTTTTCATCCATATTTACCCTGGGTCCGCTTCTAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGTTGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATC ] [-] EMBL CNS08KN4 [ AGTGGTGTAGGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTAACTCTCTTCGGTGTGAAAGATTGAAAACAGACAGAGGTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTCCTACTTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATTACAGGCTTTATTTTCCTTTCTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGAAGACATGAA AA GAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAAAACATGCGCGTACGCACGCCAGGATT GTC GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGCGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTAAACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGATCCATCAGTTTTCATCCATATTTACCCTGGGTCCGCTTCTAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGTTGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAAaaa ] [+] EMBL BM639612 [ ccgGTTGGGTAGGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCA CACTTCGGTGTGAAAGATTGAAAACAGACAGAAGTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTCCTACTTTAGGGATGGGTGGGTGTGTGGGAGTTGCTGCTATGACAGGCTTTATTTTCCTTTCTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTCAACACGGGATACATAATGGCAACATATTTTATTAGGAAGACAGGAA AA GAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGCGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAATCCAAGCATTGTACA ] [+] EMBL BX610897 [ AGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTCTTACTTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGTCAGGAAGGAAGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCT CAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTC ] [+] EMBL BM653555 [ ccGACAGGCTTTATTTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGTCAGGAAGGAAGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGA ] [+] EMBL BM623439 [ AGGCTTTATTTTCCTTTCTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTCAACACGGGATACATAATGGCAACATATTTTATTAGGAAGACAGGAA AA GAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATTGGTCCGGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATT ] [+] EMBL BX622354 [ ctTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGACAGGAAGGAAGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAATGGTTTACAAT ] [+] EMBL AGA284756 [ AATGGCAACATATTTTATTAGGATGTCAGGAAGGAAGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGGCCTCTTCGAAAGTTGTACA ] [+] EMBL BM642461 [ ccggA AG GAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAA ] [+] EMBL BX625275 [ GCGTACGCACGCCAGGATT GTC GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAATGG ] [-] EMBL AGA283461 [ CATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAATGGTTTACAATTACTTTAAACAAAA] [-] EMBL BM638728 [ ACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGTTGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAATGGTTTACAATTACT ] consensusID : consensus_9578#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 657 fasta sequence [GGGTAGAGGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGGTTGAAAACAGACAGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTATTAGGAAGACATGAAAAGAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGAACGCACGCCAGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAAGCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGTGCGCTGTTTTGATTCCCTACGCGGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAAATGGTTCGCACCCTCGGAGCGGCATATTCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGATCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACG] [+] EMBL BX623540 [GGGTAGAGGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGGTTGAAAACAGACAGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTATTAGGAAGACATGAAAAGAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGAACGCACGCCAGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAAGCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGTGCGCTGTTTTGATTCCCTACGCGGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAAATGGTTCGCACCCTCGGAGCGGCATATTCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGATCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACG] consensusID : consensus_9578#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 569 fasta sequence [AATCGCNGAGGTAAGAACGACCCGATCACATTTCCGCGAAGGACAAGTATGATTCGCTGGCGTAGTAGTGGTGTAGGGGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGATTGAAAACAGACAGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTTTAGAAGCTAGCTGGAATGGATTTTGTGTTTATTTTTTAAGATTTTCCTAAATTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTNTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGACAGGAAGGCAACGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGACTTTACTTATCCTTCATACGTANGGTGTTACCAA] [+] EMBL AL696207 [AATCGCNGAGGTAAGAACGACCCGATCACATTTCCGCGAAGGACAAGTATGATTCGCTGGCGTAGTAGTGGTGTAGGGGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGATTGAAAACAGACAGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTTTAGAAGCTAGCTGGAATGGATTTTGTGTTTATTTTTTAAGATTTTCCTAAATTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTNTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGACAGGAAGGCAACGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGACTTTACTTATCCTTCATACGTANGGTGTTACCAA] consensusID : consensus_9578#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence [GCTAGCTCAAGCCAGAATTCGGCANCCNAGGGGGTGTNNANGTCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCCGTAAGTTTTGAAGCATTTTCAACTCTCTTCGACTGTGAACACGACTTGAAAACCCCCAAAAAGGGGGGGAAAAAGGCCCCAAAAGGGGGAAAAAGGGGCGCCACTTTCCCGGCGACNCCTNTTTGGGCGGGNGTANCTTTTGGGGGGCGCGTTTTTAAAGGGGTTTTTGCNGTGTCCNGTTCCCCCTAAATGGCGGGCGCCCCTCTCCACCCCCTACCCCTCGGGGGNCACAACCCTGCGGCCCAAAANANTANCACCGCGCCCTTTCGGCGCGACANACACCNTGCGCGNCACCCTCTTCTGCGGGGGCGCCCACTTTTGCGCNCCGCGNCNGNNCTCTGAC] [+] EMBL BX466324 [GCTAGCTCAAGCCAGAATTCGGCANCCNAGGGGGTGTNNANGTCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCCGTAAGTTTTGAAGCATTTTCAACTCTCTTCGACTGTGAACACGACTTGAAAACCCCCAAAAAGGGGGGGAAAAAGGCCCCAAAAGGGGGAAAAAGGGGCGCCACTTTCCCGGCGACNCCTNTTTGGGCGGGNGTANCTTTTGGGGGGCGCGTTTTTAAAGGGGTTTTTGCNGTGTCCNGTTCCCCCTAAATGGCGGGCGCCCCTCTCCACCCCCTACCCCTCGGGGGNCACAACCCTGCGGCCCAAAANANTANCACCGCGCCCTTTCGGCGCGACANACACCNTGCGCGNCACCCTCTTCTGCGGGGGCGCCCACTTTTGCGCNCCGCGNCNGNNCTCTGAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9578#0 CCGGCAGATGGGCATTCCGGCCGGGCGCATTATCTTCTCGAACGTGGCCGCCAAGGAGGA 60 consensus_9578#1 ------------------------------------------------------------ consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 GCACGTGCGACGGGGTCAGCTGGCGGACGTCTGCTTGGATACGCCGCTCTGCAACGGACA 120 consensus_9578#1 ------------------------------------------------------------ consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 CACCACCTCGATGGATGTGCTCTGGACCGGAACGCCGGTCGTAACGCTGCCGGCAGAAAC 180 consensus_9578#1 ------------------------------------------------------------ consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 GCTAGCGTCCAGAGTTGCCGCATCGCAGCTGGCAACGCTGGGCTGCCCGGAACTGATCGC 240 consensus_9578#1 ------------------------------------------------------------ consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 CAAATCGCGGCAAGAGTATCAGGACATCGCGATCAAACTCGGTACCGACCGGGAGTACCT 300 consensus_9578#1 ------------------------------------------------------------ consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 AAAGGCGATGCGTGCCAAGGTTGGGTAGCCCGCTGCGAAAGTCCGCTGTTCGACTGCAAG 360 consensus_9578#1 ------------------------------------------------------------ consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 CAGTACGCGCAGGGACTGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGC 420 consensus_9578#1 ------------------------------------------------------------ consensus_9578#2 ----------------------------------------------AATCGCNGAGGTAA 14 consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 GAACGACCCGATCACATTTCCGCGAAGGACAAGTA-GATTCGCTGGCGTAGTAGTGGTGT 479 consensus_9578#1 --------------------------------------------------------GGGT 4 consensus_9578#2 GAACGACCCGATCACATTTCCGCGAAGGACAAGTATGATTCGCTGGCGTAGTAGTGGTGT 74 consensus_9578#3 ----------------------------GCTAGCTCAAGCCAGAATTCGGCANCCNAGGG 32 * consensus_9578#0 AGGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGC-GTA 538 consensus_9578#1 AGAG-GAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGC-GTA 62 consensus_9578#2 AGGG-GAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGC-GTA 132 consensus_9578#3 GGTGTNNANGTCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCCGTA 92 * * * ********************************************* *** consensus_9578#0 A-TTTTGAAGCATTTTCA-CTCTCTTCGG-TGTGAA---AGATTGAAAACAGACAGAGGT 592 consensus_9578#1 A-TTTTGAAGCATTTTCA-CTCTCTTCGA-TGTGAA---AGGTTGAAAACAGACAGAGTT 116 consensus_9578#2 A-TTTTGAAGCATTTTCA-CTCTCTTCGA-TGTGAA---AGATTGAAAACAGACAGAGTT 186 consensus_9578#3 AGTTTTGAAGCATTTTCAACTCTCTTCGACTGTGAACACGACTTGAAAACCCCCAAAAAG 152 * **************** ********* ****** ******** ** * consensus_9578#0 GTGGTGTATTTCAGTTTGAGAATGAGTGTT--AGAAGCTAGCTGGAATGGATTTTGTTGT 650 consensus_9578#1 GTGGTGTATTTCAGTTTGAGAATGAGTGTT--AGAAGCTAGCTGGAATGGATTTTGTTGT 174 consensus_9578#2 GTGGTGTATTTCAGTTTGAGAATGAGTGTTTTAGAAGCTAGCTGGAATGGATTTTGT-GT 245 consensus_9578#3 GGGGGGAAAAAGGCCCCAAAAGGGGGAAAAAGGGGCGCCA-CTTTCCCGGCGACNCCTNT 211 * ** * * * * * * * ** * ** ** * consensus_9578#0 TTATTTTTTAAGATTTTCCTAC-TTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATG 709 consensus_9578#1 TTATTTTTTAAGATTTT------------------------------------------- 191 consensus_9578#2 TTATTTTTTAAGATTTTCCTAAATTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATG 305 consensus_9578#3 TTGGGCGGGNGTANCTTTT--------GGGGGGCGCGTTTTTAAAGGGGTTTTTGCNGTG 263 ** * ** consensus_9578#0 ACAGGCTTTATTTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTG 769 consensus_9578#1 ------------------------------------------------------------ consensus_9578#2 ACAGGCTTTATTTTCCTTTNTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTG 365 consensus_9578#3 TCCNGTTCC----------------------------------------------CCCTA 277 consensus_9578#0 AACACGGGATACATAATGGCAACATATTTTATTAGGAAGACAGGAAAA-----GAACAAG 824 consensus_9578#1 ------------------------------ATTAGGAAGACATGAAAA-----GAACAAG 216 consensus_9578#2 AACACGGGATACATAATGGCAACATATTTTATTAGGATGACAGGAAGGCAACGGAACAAG 425 consensus_9578#3 AATGGCGGGCGCCCCTCTCCACCCCCTACCCCTCGGGGGNCACAACCCTG--CGGCCCAA 335 * ** * ** * * * * consensus_9578#0 AAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCC 884 consensus_9578#1 AAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGAACGCACGCC 276 consensus_9578#2 AAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCC 485 consensus_9578#3 AANANTANCACCGC-----GCCCTTTCGGCGCGACANACAC-CNTGCGCGN---CAC-CC 385 ** * * ** * ** * ** * ** * ****** *** ** consensus_9578#0 AGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGA-TTTACTTAT 943 consensus_9578#1 AGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGA-ATTACTTAT 335 consensus_9578#2 AGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGACTTTACTTAT 545 consensus_9578#3 TCTTCTGCGGGGGCGCCCACTTTTGCGCN-CCGCGNCNGNNCTCTGAC------------ 432 ** * ** * ** * * * ** consensus_9578#0 TTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAAGCAAG 1003 consensus_9578#1 TTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAAGCAAG 395 consensus_9578#2 CCTTCATACGTANGGTGTTACCAA------------------------------------ 569 consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 CATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTG 1063 consensus_9578#1 CATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGTGCGCTGTTTTG 455 consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 ATTCCCTACGCGG-TTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGAT 1122 consensus_9578#1 ATTCCCTACGCGGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAAAT 515 consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 GGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAG 1182 consensus_9578#1 GGTTCGCACCCTCGGAGCGGCATATTCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAG 575 consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 GAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGC 1242 consensus_9578#1 GATCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGC 635 consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 AGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAA 1302 consensus_9578#1 AGCTGTCGGCACCGCACAGACG-------------------------------------- 657 consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 ACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGA 1362 consensus_9578#1 ------------------------------------------------------------ consensus_9578#2 ------------------------------------------------------------ consensus_9578#3 ------------------------------------------------------------ consensus_9578#0 ATGTTACAATTAAAGCAAAAAAATGGTTTACAATTACTTTAAACAAAA 1410 consensus_9578#1 ------------------------------------------------ consensus_9578#2 ------------------------------------------------ consensus_9578#3 ------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||