cluster # 9578

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Anopheles gambiae
cluster # 9578 cluster # 9578 Sequences # 18 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9578#0 length = 1410 sequences # 15
consensus_9578#1 length = 657 sequences # 1

consensus_9578#2 length = 569 sequences # 1
consensus_9578#3 length = 432 sequences # 1

consensusID : consensus_9578#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 15
consensus length = 1410
fasta sequence

                              [CCGGCAGATGGGCATTCCGGCCGGGCGCATTATCTTCTCGAACGTGGCCGCCAAGGAGGAGCACGTGCGACGGGGTCAGCTGGCGGACGTCTGCTTGGATACGCCGCTCTGCAACGGACACACCACCTCGATGGATGTGCTCTGGACCGGAACGCCGGTCGTAACGCTGCCGGCAGAAACGCTAGCGTCCAGAGTTGCCGCATCGCAGCTGGCAACGCTGGGCTGCCCGGAACTGATCGCCAAATCGCGGCAAGAGTATCAGGACATCGCGATCAAACTCGGTACCGACCGGGAGTACCTAAAGGCGATGCGTGCCAAGGT-TGGGTAGCCCGCTGCGAAAGTCCGCTGTTCGACTGCAAGCAGTACGCGCAGGGACTGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGCGAACGACCCGATCACATTTCCGCGAAGGACAAGTAGATTCGCTGGCGTAGTAGTGGTGTAGGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGGTGTGAAAGATTGAAAACAGACAGAGGTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTCCTACTTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGAAGACAGGAA--AA-GAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT-GTC--GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA-GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAATGGTTTACAATTACTTTAAACAAAA]

[+] EMBL BM594596             [CCGGCAGATGGGCATTCCGGCCGGGCGCATTATCTTCTCGAACGTGGCCGCCAAGGAGGAGCACGTGCGACGGGGTCAGCTGGCGGACGTCTGCTTGGATACGCCGCTCTGCAACGGACACACCACCTCGATGGATGTGCTCTGGACCGGAACGCCGGTCGTAACGCTGCCGGCAGAAACGCTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX609462             [                                                                                                                                CGATGGATGTGCTCTGGACCGGAACGCCGGTCGTAACGCTGCCGGCAGAAACGCTAGCGTCCAGAGTTGCCGCATCGCAGCTGGCAACGCTGGGCTGCCCGGAACTGATCGCCAAATCGCGGCAAGAGTATCAGGACATCGCGATCAAACTCGGTACCGACCGGGAGTACCTAAAGGCGATGCGTGCCAAGGT TGGGTAGCCCGCTGCGAAAGTCCGCTGTTCGACTGCAAGCAGTACGCGCAGGGACTGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGCGAACGACCCGATCACATTTCCGCGAAGGACAAGTAGATTCGCTGGCGTAGTAGTGGTGTAGGG GAAGTCCTTCACTTGGGTGAACTGTGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGATTGAAAGCAGACAGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAATATTTTCTTACTTTAAGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM643692             [                                                                                                                                                                                                                                                                            cCGATCAAACTCGGTACCGACCGGGAGTACCTAAAGGCGATGCGTGCCAAGGTGTGGGTAGCCCGCTGCGAAAGTCCCCTGTTCGACTGCAAGCAGTACGCGCAGGGTCTGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGCGAACGACCCGATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CNS08KN3             [                                                                                                                                                                                                                                                                                                                                                                                         TGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGCGAACGACCCGATCACATTTCCGCGAAGGACAAGTAAATTCGCTGGCGTAGTAGTGGTGTAGGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGGTGTGAAAGATTGAAAACAGACAGAGGTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTCCTACTTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTCTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGAAGACATGAA  AA GAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC  GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGCGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGATCCATCAGTTTTCATCCATATTTACCCTGGGTCCGCTTCTAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGTTGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATC                                                                               ]
[-] EMBL CNS08KN4             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGTGGTGTAGGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTAACTCTCTTCGGTGTGAAAGATTGAAAACAGACAGAGGTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTCCTACTTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATTACAGGCTTTATTTTCCTTTCTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGAAGACATGAA  AA GAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAAAACATGCGCGTACGCACGCCAGGATT GTC  GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGCGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTAAACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGATCCATCAGTTTTCATCCATATTTACCCTGGGTCCGCTTCTAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGTTGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAAaaa                      ]
[+] EMBL BM639612             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ccgGTTGGGTAGGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCA  CACTTCGGTGTGAAAGATTGAAAACAGACAGAAGTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTCCTACTTTAGGGATGGGTGGGTGTGTGGGAGTTGCTGCTATGACAGGCTTTATTTTCCTTTCTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTCAACACGGGATACATAATGGCAACATATTTTATTAGGAAGACAGGAA  AA GAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC  GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGCGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAATCCAAGCATTGTACA                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX610897             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTCTTACTTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGTCAGGAAGGAAGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC  GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCT CAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTC                                                                                                                                                                                              ]
[+] EMBL BM653555             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccGACAGGCTTTATTTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGTCAGGAAGGAAGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC  GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGA                                                                                     ]
[+] EMBL BM623439             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGGCTTTATTTTCCTTTCTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTCAACACGGGATACATAATGGCAACATATTTTATTAGGAAGACAGGAA  AA GAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATTGGTCCGGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX622354             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ctTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGACAGGAAGGAAGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC  GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAATGGTTTACAAT              ]
[+] EMBL AGA284756            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATGGCAACATATTTTATTAGGATGTCAGGAAGGAAGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC  GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGGCCTCTTCGAAAGTTGTACA                                                                                                                                                                               ]
[+] EMBL BM642461             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccggA  AG GAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATT GTC  GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAA                                                           ]
[+] EMBL BX625275             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCGTACGCACGCCAGGATT GTC  GAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAA GCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAATGG                      ]
[-] EMBL AGA283461            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAATGGTTTACAATTACTTTAAACAAAA]
[-] EMBL BM638728             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGTTGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAAAAAAATGGTTTACAATTACT          ]




>consensus_9578#0
CCGGCAGATGGGCATTCCGGCCGGGCGCATTATCTTCTCGAACGTGGCCGCCAAGGAGGA
GCACGTGCGACGGGGTCAGCTGGCGGACGTCTGCTTGGATACGCCGCTCTGCAACGGACA
CACCACCTCGATGGATGTGCTCTGGACCGGAACGCCGGTCGTAACGCTGCCGGCAGAAAC
GCTAGCGTCCAGAGTTGCCGCATCGCAGCTGGCAACGCTGGGCTGCCCGGAACTGATCGC
CAAATCGCGGCAAGAGTATCAGGACATCGCGATCAAACTCGGTACCGACCGGGAGTACCT
AAAGGCGATGCGTGCCAAGGTTGGGTAGCCCGCTGCGAAAGTCCGCTGTTCGACTGCAAG
CAGTACGCGCAGGGACTGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGC
GAACGACCCGATCACATTTCCGCGAAGGACAAGTAGATTCGCTGGCGTAGTAGTGGTGTA
GGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAAT
TTTGAAGCATTTTCACTCTCTTCGGTGTGAAAGATTGAAAACAGACAGAGGTGTGGTGTA
TTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTA
AGATTTTCCTACTTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTAT
TTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATA
CATAATGGCAACATATTTTATTAGGAAGACAGGAAAAGAACAAGAAGAGCAACAATAATA
TTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATTGTCGAAGCTC
TGTTACTTAAATTGTAGAGAGAAAGGTAGCACGATTTACTTATTTTTCATACGTTTGGTG
TTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAAGCAAGCATTGTACATAGCAAAA
TGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTGATTCCCTACGCGGTTTT
ACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGATGGTTCGCACCCTCGGAGC
GGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGAGCCATCAGTTTTCATC
CATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACA
GACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAAACAGTCGAATTATATTCT
ATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGAATGTTACAATTAAAGCAA
AAAAATGGTTTACAATTACTTTAAACAAAA

consensusID : consensus_9578#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 657
fasta sequence

                              [GGGTAGAGGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGGTTGAAAACAGACAGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTATTAGGAAGACATGAAAAGAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGAACGCACGCCAGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAAGCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGTGCGCTGTTTTGATTCCCTACGCGGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAAATGGTTCGCACCCTCGGAGCGGCATATTCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGATCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACG]

[+] EMBL BX623540             [GGGTAGAGGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGGTTGAAAACAGACAGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTTTTTAAGATTTTATTAGGAAGACATGAAAAGAACAAGAAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGAACGCACGCCAGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAAGCAAGCATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGTGCGCTGTTTTGATTCCCTACGCGGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAAATGGTTCGCACCCTCGGAGCGGCATATTCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGATCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACG]




>consensus_9578#1
GGGTAGAGGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCG
TAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGGTTGAAAACAGACAGAGTTGTGG
TGTATTTCAGTTTGAGAATGAGTGTTAGAAGCTAGCTGGAATGGATTTTGTTGTTTATTT
TTTAAGATTTTATTAGGAAGACATGAAAAGAACAAGAAAAGCAACAATAATATTACACTT
TCCAAAATGATTCAAACACATGCGCGAACGCACGCCAGGATTGTCGAAGCTCTGTTACTT
AAATTGTAGAGAGAAAGGTAGCACGAATTACTTATTTTTCATACGTTTGGTGTTACCACC
CAATCGACAGGTGTTAATTTCGTGCAGCAAGCAAGCATTGTACATAGCAAAATGACAAAG
TTTTGAGATAATCTAATTAGTAGTGCGCTGTTTTGATTCCCTACGCGGGTTTTACACATA
CGCAACACAGTTTTTGCTGATATGTCCTAGGAAATGGTTCGCACCCTCGGAGCGGCATAT
TCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAGGATCCATCAGTTTTCATCCATATTT
ACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGCAGCTGTCGGCACCGCACAGACG

consensusID : consensus_9578#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 569
fasta sequence

                              [AATCGCNGAGGTAAGAACGACCCGATCACATTTCCGCGAAGGACAAGTATGATTCGCTGGCGTAGTAGTGGTGTAGGGGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGATTGAAAACAGACAGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTTTAGAAGCTAGCTGGAATGGATTTTGTGTTTATTTTTTAAGATTTTCCTAAATTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTNTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGACAGGAAGGCAACGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGACTTTACTTATCCTTCATACGTANGGTGTTACCAA]

[+] EMBL AL696207             [AATCGCNGAGGTAAGAACGACCCGATCACATTTCCGCGAAGGACAAGTATGATTCGCTGGCGTAGTAGTGGTGTAGGGGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGATTGAAAACAGACAGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTTTAGAAGCTAGCTGGAATGGATTTTGTGTTTATTTTTTAAGATTTTCCTAAATTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATGACAGGCTTTATTTTCCTTTNTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGACAGGAAGGCAACGGAACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCCAGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGACTTTACTTATCCTTCATACGTANGGTGTTACCAA]




>consensus_9578#2
AATCGCNGAGGTAAGAACGACCCGATCACATTTCCGCGAAGGACAAGTATGATTCGCTGG
CGTAGTAGTGGTGTAGGGGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCA
TCTTGGAGCGTAATTTTGAAGCATTTTCACTCTCTTCGATGTGAAAGATTGAAAACAGAC
AGAGTTGTGGTGTATTTCAGTTTGAGAATGAGTGTTTTAGAAGCTAGCTGGAATGGATTT
TGTGTTTATTTTTTAAGATTTTCCTAAATTTAGGGATGGGTGGGTGTGTGGGAGCTGCTG
CTATGACAGGCTTTATTTTCCTTTNTTCTAATTTTCCAACATATATCGGTATGATTGATT
TTCTGAACACGGGATACATAATGGCAACATATTTTATTAGGATGACAGGAAGGCAACGGA
ACAAGAAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGC
ACGCCAGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGACTTTA
CTTATCCTTCATACGTANGGTGTTACCAA

consensusID : consensus_9578#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 432
fasta sequence

                              [GCTAGCTCAAGCCAGAATTCGGCANCCNAGGGGGTGTNNANGTCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCCGTAAGTTTTGAAGCATTTTCAACTCTCTTCGACTGTGAACACGACTTGAAAACCCCCAAAAAGGGGGGGAAAAAGGCCCCAAAAGGGGGAAAAAGGGGCGCCACTTTCCCGGCGACNCCTNTTTGGGCGGGNGTANCTTTTGGGGGGCGCGTTTTTAAAGGGGTTTTTGCNGTGTCCNGTTCCCCCTAAATGGCGGGCGCCCCTCTCCACCCCCTACCCCTCGGGGGNCACAACCCTGCGGCCCAAAANANTANCACCGCGCCCTTTCGGCGCGACANACACCNTGCGCGNCACCCTCTTCTGCGGGGGCGCCCACTTTTGCGCNCCGCGNCNGNNCTCTGAC]

[+] EMBL BX466324             [GCTAGCTCAAGCCAGAATTCGGCANCCNAGGGGGTGTNNANGTCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCCGTAAGTTTTGAAGCATTTTCAACTCTCTTCGACTGTGAACACGACTTGAAAACCCCCAAAAAGGGGGGGAAAAAGGCCCCAAAAGGGGGAAAAAGGGGCGCCACTTTCCCGGCGACNCCTNTTTGGGCGGGNGTANCTTTTGGGGGGCGCGTTTTTAAAGGGGTTTTTGCNGTGTCCNGTTCCCCCTAAATGGCGGGCGCCCCTCTCCACCCCCTACCCCTCGGGGGNCACAACCCTGCGGCCCAAAANANTANCACCGCGCCCTTTCGGCGCGACANACACCNTGCGCGNCACCCTCTTCTGCGGGGGCGCCCACTTTTGCGCNCCGCGNCNGNNCTCTGAC]




>consensus_9578#3
GCTAGCTCAAGCCAGAATTCGGCANCCNAGGGGGTGTNNANGTCTTCACTTGGGTGAACT
ATGAGGATTTCCTCTTCCATCTTGGAGCCGTAAGTTTTGAAGCATTTTCAACTCTCTTCG
ACTGTGAACACGACTTGAAAACCCCCAAAAAGGGGGGGAAAAAGGCCCCAAAAGGGGGAA
AAAGGGGCGCCACTTTCCCGGCGACNCCTNTTTGGGCGGGNGTANCTTTTGGGGGGCGCG
TTTTTAAAGGGGTTTTTGCNGTGTCCNGTTCCCCCTAAATGGCGGGCGCCCCTCTCCACC
CCCTACCCCTCGGGGGNCACAACCCTGCGGCCCAAAANANTANCACCGCGCCCTTTCGGC
GCGACANACACCNTGCGCGNCACCCTCTTCTGCGGGGGCGCCCACTTTTGCGCNCCGCGN
CNGNNCTCTGAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9578#0      CCGGCAGATGGGCATTCCGGCCGGGCGCATTATCTTCTCGAACGTGGCCGCCAAGGAGGA 60
consensus_9578#1      ------------------------------------------------------------
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      GCACGTGCGACGGGGTCAGCTGGCGGACGTCTGCTTGGATACGCCGCTCTGCAACGGACA 120
consensus_9578#1      ------------------------------------------------------------
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      CACCACCTCGATGGATGTGCTCTGGACCGGAACGCCGGTCGTAACGCTGCCGGCAGAAAC 180
consensus_9578#1      ------------------------------------------------------------
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      GCTAGCGTCCAGAGTTGCCGCATCGCAGCTGGCAACGCTGGGCTGCCCGGAACTGATCGC 240
consensus_9578#1      ------------------------------------------------------------
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      CAAATCGCGGCAAGAGTATCAGGACATCGCGATCAAACTCGGTACCGACCGGGAGTACCT 300
consensus_9578#1      ------------------------------------------------------------
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      AAAGGCGATGCGTGCCAAGGTTGGGTAGCCCGCTGCGAAAGTCCGCTGTTCGACTGCAAG 360
consensus_9578#1      ------------------------------------------------------------
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      CAGTACGCGCAGGGACTGGAAATGCTGTTCTACAAGATGTGGGAACGGTTTGCGCGCGGC 420
consensus_9578#1      ------------------------------------------------------------
consensus_9578#2      ----------------------------------------------AATCGCNGAGGTAA 14
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      GAACGACCCGATCACATTTCCGCGAAGGACAAGTA-GATTCGCTGGCGTAGTAGTGGTGT 479
consensus_9578#1      --------------------------------------------------------GGGT 4
consensus_9578#2      GAACGACCCGATCACATTTCCGCGAAGGACAAGTATGATTCGCTGGCGTAGTAGTGGTGT 74
consensus_9578#3      ----------------------------GCTAGCTCAAGCCAGAATTCGGCANCCNAGGG 32
                                                                                * 

consensus_9578#0      AGGGTGAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGC-GTA 538
consensus_9578#1      AGAG-GAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGC-GTA 62
consensus_9578#2      AGGG-GAAGTCCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGC-GTA 132
consensus_9578#3      GGTGTNNANGTCTTCACTTGGGTGAACTATGAGGATTTCCTCTTCCATCTTGGAGCCGTA 92
                       * *   *   ********************************************* ***

consensus_9578#0      A-TTTTGAAGCATTTTCA-CTCTCTTCGG-TGTGAA---AGATTGAAAACAGACAGAGGT 592
consensus_9578#1      A-TTTTGAAGCATTTTCA-CTCTCTTCGA-TGTGAA---AGGTTGAAAACAGACAGAGTT 116
consensus_9578#2      A-TTTTGAAGCATTTTCA-CTCTCTTCGA-TGTGAA---AGATTGAAAACAGACAGAGTT 186
consensus_9578#3      AGTTTTGAAGCATTTTCAACTCTCTTCGACTGTGAACACGACTTGAAAACCCCCAAAAAG 152
                      * **************** *********  ******      ********   ** *   

consensus_9578#0      GTGGTGTATTTCAGTTTGAGAATGAGTGTT--AGAAGCTAGCTGGAATGGATTTTGTTGT 650
consensus_9578#1      GTGGTGTATTTCAGTTTGAGAATGAGTGTT--AGAAGCTAGCTGGAATGGATTTTGTTGT 174
consensus_9578#2      GTGGTGTATTTCAGTTTGAGAATGAGTGTTTTAGAAGCTAGCTGGAATGGATTTTGT-GT 245
consensus_9578#3      GGGGGGAAAAAGGCCCCAAAAGGGGGAAAAAGGGGCGCCA-CTTTCCCGGCGACNCCTNT 211
                      * ** * *          * *  * *       *  ** * **     **         *

consensus_9578#0      TTATTTTTTAAGATTTTCCTAC-TTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATG 709
consensus_9578#1      TTATTTTTTAAGATTTT------------------------------------------- 191
consensus_9578#2      TTATTTTTTAAGATTTTCCTAAATTTAGGGATGGGTGGGTGTGTGGGAGCTGCTGCTATG 305
consensus_9578#3      TTGGGCGGGNGTANCTTTT--------GGGGGGCGCGTTTTTAAAGGGGTTTTTGCNGTG 263
                      **          *  **                                           

consensus_9578#0      ACAGGCTTTATTTTCCTTTTTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTG 769
consensus_9578#1      ------------------------------------------------------------
consensus_9578#2      ACAGGCTTTATTTTCCTTTNTTCTAATTTTCCAACATATATCGGTATGATTGATTTTCTG 365
consensus_9578#3      TCCNGTTCC----------------------------------------------CCCTA 277
                                                                                  

consensus_9578#0      AACACGGGATACATAATGGCAACATATTTTATTAGGAAGACAGGAAAA-----GAACAAG 824
consensus_9578#1      ------------------------------ATTAGGAAGACATGAAAA-----GAACAAG 216
consensus_9578#2      AACACGGGATACATAATGGCAACATATTTTATTAGGATGACAGGAAGGCAACGGAACAAG 425
consensus_9578#3      AATGGCGGGCGCCCCTCTCCACCCCCTACCCCTCGGGGGNCACAACCCTG--CGGCCCAA 335
                                                      * **  * **  *        *  * * 

consensus_9578#0      AAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCC 884
consensus_9578#1      AAAAGCAACAATAATATTACACTTTCCAAAATGATTCAAACACATGCGCGAACGCACGCC 276
consensus_9578#2      AAGAGCAACAATAATATTAAACTTTCCAAAATGATTCAAACACATGCGCGTACGCACGCC 485
consensus_9578#3      AANANTANCACCGC-----GCCCTTTCGGCGCGACANACAC-CNTGCGCGN---CAC-CC 385
                      ** *  * **           * ** *     **   * ** * ******    *** **

consensus_9578#0      AGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGA-TTTACTTAT 943
consensus_9578#1      AGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGA-ATTACTTAT 335
consensus_9578#2      AGGATTGTCGAAGCTCTGTTACTTAAATTGTAGAGAGAAAGGTAGCACGACTTTACTTAT 545
consensus_9578#3      TCTTCTGCGGGGGCGCCCACTTTTGCGCN-CCGCGNCNGNNCTCTGAC------------ 432
                           **  *  ** *      **        * *       *   **            

consensus_9578#0      TTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAAGCAAG 1003
consensus_9578#1      TTTTCATACGTTTGGTGTTACCACCCAATCGACAGGTGTTAATTTCGTGCAGCAAGCAAG 395
consensus_9578#2      CCTTCATACGTANGGTGTTACCAA------------------------------------ 569
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      CATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGCGCGCTGTTTTG 1063
consensus_9578#1      CATTGTACATAGCAAAATGACAAAGTTTTGAGATAATCTAATTAGTAGTGCGCTGTTTTG 455
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      ATTCCCTACGCGG-TTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAGAT 1122
consensus_9578#1      ATTCCCTACGCGGGTTTTACACATACGCAACACAGTTTTTGCTGATATGTCCTAGGAAAT 515
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      GGTTCGCACCCTCGGAGCGGCATATCCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAG 1182
consensus_9578#1      GGTTCGCACCCTCGGAGCGGCATATTCGGTAGCGCTAACGTTTTCCTCCAACACGAAGAG 575
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      GAGCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGC 1242
consensus_9578#1      GATCCATCAGTTTTCATCCATATTTACCCTGGGTCCTCTTCGAAAGTTGTACATAATTGC 635
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      AGCTGTCGGCACCGCACAGACGGGCCGGTAGCAATTAGATGTAATTTTTACGCGTAAGAA 1302
consensus_9578#1      AGCTGTCGGCACCGCACAGACG-------------------------------------- 657
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      ACAGTCGAATTATATTCTATCGACTCATCTGCGATCTACTAGATAAGAATTTTGAAATGA 1362
consensus_9578#1      ------------------------------------------------------------
consensus_9578#2      ------------------------------------------------------------
consensus_9578#3      ------------------------------------------------------------
                                                                                  

consensus_9578#0      ATGTTACAATTAAAGCAAAAAAATGGTTTACAATTACTTTAAACAAAA 1410
consensus_9578#1      ------------------------------------------------
consensus_9578#2      ------------------------------------------------
consensus_9578#3      ------------------------------------------------