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Anopheles gambiae
cluster # 9579 cluster # 9579       Sequences # 18       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9579#0 length = 951 sequences # 9  
consensus_9579#1 length = 847 sequences # 2  
consensus_9579#2 length = 740 sequences # 1  
consensus_9579#3 length = 734 sequences # 1  
consensus_9579#4 length = 633 sequences # 4  
consensus_9579#5 length = 575 sequences # 1  

consensusID : consensus_9579#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 951
fasta sequence
                              [GCTGTTGATTCCTCGAGAACTGTTGGCCCACTGGTGAGCCGAGTTTGAATTCGCATTCTATTGCCCCCTCGTTATCCGGCTGATAATAAAAAGCAATATTTATTCAGTCTCGACACCGCGAAGCACTACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTCTACTGTTGTACAAAAG-ATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTATGCACTGAAAAA-GGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCG-TTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGCATGTCGAACATCAT-CGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTCGGCCAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAAGGTTATCGGCATTTGCACGATTAAGTGATGCACTCGAGCGACTCATCTCTTGAAGGCTTCGCCGTC-TTCTTCTGCTTTGTTGCACAAAATATAATCCTCACTCGAGAGGCGGTTGGATGCCTCTTTTCCGCTG---AAAAAAAAAAA-AAAAAAAA---CAAATGTTCCCCAGCTTCT]

[-] EMBL CNS08F86             [GCTGTTGATTCCTCGAGAACTGTTGGCCCACTGGTGAGCCGTGTTTGAATTCGCATTTTATTGCCCCCTCGTTATCCGGCTGATAATAAAAAGCAATATTTATTTAGTCTCGACACCGCGAAGAACAACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTCTACTGTTGTACAAAAG ATGCAGAAAATTGTTTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTATGAACTGAAAAA GGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGA CG TTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGGACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGCATGTCGGACATCAT CGCCGCTATGAAGGAAG TTCGCTGAAGAAGTTTTCCGTCTTTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTCGGCCAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAAGGTTATCGGCATTTGCACGATTAAGTGATGCACTCGAGCGACTCATCTCTTGAAAACGTCGCCGTC TTCTTCTGCTTT TTGCACAAAATATAATCCTCACTCGAGAGGCGGTTGGATGCCTGTTTTCCGCTG   A                                         ]
[-] EMBL CNS09LNX             [                              CTGTTG GCCTA  CTGAATTCGCATTCTATTGCCCCCTCGTTATCCGGCTGATAATAAAAAGCAATATTTATTCAGTCTCGACACCGCGAAGCACAACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTCTACTGTTGTACAAAAG ATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTATGCACTGAAAAA GGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGA CG TTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGCATGTCGAACATCAT CGCCGCTATGAAGGAAG TTCGCTGAAGAAGTTTTCCGTCTTTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTCGGCCAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAAGGTTATCGGCATTTGCACGATTAAGTGATGCACTCGAGCGACTCATCTCTTGAA  CGTCGCCGTC TTCTTCTGCTTT TTGCACAAAATATAATCCTCACTCGAGAG                                                                      ]
[+] EMBL CNS08F85             [                                GGTGAGCCGAGTTTGCATTCGCATTCTATTGCCCCCTCGTTATCCGGCTGATAATAAAAAGCAATATTTATTCAGTCTCGACACCGCGAAG ACTACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTCTACTGTTGTACAAAAG ATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTATGCACTGAAAAA GGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCG TTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGCATGTCGAACATCAT CGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTCGGCCAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAAGGTTATCGGCATTTGCACGATTAAGTTATGCACTCGAGCGACTCATCTCTTGAAGGCTTCG CGTCTTTCTTCTGCTTTGTTGCACAAAATATAATCCTCACTCGAGAGGCGGTTGGATGCCTCTTTTCCGCTG   GAAAAAAAAAA AAAAAAAA   CAAATGTTCCCCAGC    ]
[+] EMBL CNS09E0U             [                                                      cccCTATTG CCCCTCGTTATCCGGCTGATAATAAAAAGCAATATTTATTCAGTCTCGACACCGCGAAG ACTACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTCTACTGTTGTACAAAAG ATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTATGCACTGAAAAAGGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGCTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGCCGCCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS09OXJ             [                                                                                                     ATTCAGTCTCGACACCGCGAAGC TTACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTCTACTGTTGTACAAAAGCATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTATGCACTGAAAAA GGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCG TTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGCATGTCGAACATCAT CGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTCGGCCAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAAGGTTATCGGCATTTGCACGATTAAGTGATGCACTCGAGCGACTCATCTCTTGAAGGCTTCG CGTC TTCTTCTGCTTTGTTGCACAAAATATAATCCTCACTCGAGAGGCGGTTGGATGCCTCTTTTCCGCTGGAAAAAAAAAAAAACAAAAAAAAGGCCACATGTTCTCGAGCTTCT]
[+] EMBL BM609191             [                                                                                                                   CCG GAAGCACTACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTCTACTGTTGTACAAAAG ATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTATGCACTGAAAAA GGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCG TTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGCATGTCGAACATCAT CGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTCGGCCAATTCCTCGTGGACTGCCTGTTCGATGAAGCACATGCG                                                                                                                                                                                        ]
[+] EMBL BM575114             [                                                                                                                          ccgCTACAGCCGTGATTGTAATTTTAGATACGATTGTTCTAGTCTCCCCTCTCGGTTCTACTGTTGTACAAAAG ATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAA GGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCG TTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGTATGTCGAACATCAT CGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTCGGCCAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAAGGGTATCG                                                                                                                                                                           ]
[+] EMBL BX622834             [                                                                                                                                                                                                     ATGCAGAAGATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAA GGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCG TTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGTATGTCGAACATCAT CGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTCGGCCAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAAGGTTATCGGCATTTGCACGATTAAGTGATGCACTCGAGCGACTCATCTCTTGAANGCTTCGCCGTC TTCTTCTGCTTTGTTGCACAAAATATAATCCTCACTCGAGAGACGGNTGGATGCCT                                                        ]
[-] EMBL AGA284823            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACGGTATGTCGAACATCATCCCCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTCGGCCAATT       GACTGCCTGTTCGATGAGGCACATGCGGGAAAGGTTATCGGCATTTGCACGATTAAGTGATGCACTCGAGCGACTCATCTCTTGAAGGCTTCGCCGTC TTCTTCTGCTTTGTTGCACAAAATATAATCCTCACTCGAGAGACGGTTGGATGCCTCTTTTCCGC                                               ]


>consensus_9579#0 GCTGTTGATTCCTCGAGAACTGTTGGCCCACTGGTGAGCCGAGTTTGAATTCGCATTCTA TTGCCCCCTCGTTATCCGGCTGATAATAAAAAGCAATATTTATTCAGTCTCGACACCGCG AAGCACTACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTC TACTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCA ATGTGCGGTTCGGTATGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGA GGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAA CGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCAC GCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGCATGTCGAACATCATCGCCGC TATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGA CCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGA GACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGA ACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTC CAAGCTCGATCTCGGCCAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAA GGTTATCGGCATTTGCACGATTAAGTGATGCACTCGAGCGACTCATCTCTTGAAGGCTTC GCCGTCTTCTTCTGCTTTGTTGCACAAAATATAATCCTCACTCGAGAGGCGGTTGGATGC CTCTTTTCCGCTGAAAAAAAAAAAAAAAAAAACAAATGTTCCCCAGCTTCT



consensusID : consensus_9579#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 847
fasta sequence
                              [AAAAATACGAAATTCCTCGAGCACTGTTGGCCAACTGGAATTCAGTCTCGACACCGCGAAGCACCACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTCTACTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTATGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGCATGTCGAACATCATCGCCGCTATGAAGGAAGTTCGCTGAAGAAGTTTTCCGTCTTTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGC-GGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCT-CGATCTCGGC-CAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAAGGTTATCGGCATTTGCACGATTAAGTGATGCACTCGAGCGACTCATCTCTTGTAAAGTCGCCGTCTTCTTCTGCTTTTTGCACAAAATATAATCCTCACTCGAGAGGCGGTTGGATGCCTCTTTTCCGC]

[-] EMBL CNS09OXK             [AAAAATACGAAATTCCTCGAGCACTGTTGGCCAACTGGAATTCAGTCTCGACACCGCGAAGCACCACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTCTACTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTATGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGCATGTCGAACATCATCGCCGCTATGAAGGAAGTTCGCTGAAGAAGTTTTCCGTCTTTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGC GGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCT CGATCTCGGC CAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAAGGTTATCGGCATTTGCACGATTAAGTGATGCACTCGAGCGACTCATCTCTTGTAAAGTCGCCGTCTTCTTCTGCTTTTTGCACAAAATATAATCCTCACTCGAGAGGCGGTTGGATGCCTCTTTTCCGC]
[-] EMBL CNS09E0V             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCATGCTGGAGACGGTGAAGGGCTGCGGGGTTGGAGTACCGGGCCGGGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTGCGATCTCGGCGCAATTCCTCGTGGACTGCCTGTTCGATGAGGGACATGCGGGAAAG                                                                                                                                ]


>consensus_9579#1 AAAAATACGAAATTCCTCGAGCACTGTTGGCCAACTGGAATTCAGTCTCGACACCGCGAA GCACCACAGCCGTGATTGTAATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTTCTA CTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAAT GTGCGGTTCGGTATGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGG CGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAAACGAAC GTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACG CGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGCATGTCGAACATCATCGCCGCT ATGAAGGAAGTTCGCTGAAGAAGTTTTCCGTCTTTCTGTCGTCGTTCCTGTTCATGGACC CGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGA CGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAAC CTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCA AGCTCGATCTCGGCCAATTCCTCGTGGACTGCCTGTTCGATGAGGCACATGCGGGAAAGG TTATCGGCATTTGCACGATTAAGTGATGCACTCGAGCGACTCATCTCTTGTAAAGTCGCC GTCTTCTTCTGCTTTTTGCACAAAATATAATCCTCACTCGAGAGGCGGTTGGATGCCTCT TTTCCGC



consensusID : consensus_9579#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 740
fasta sequence
                              [CAAGAATCGGCCGAGGCTGNAAAGCACTATAGCCGTGATTGTACATTTTGGATACGATTGTTCTAGTCTCCCCTCTCGGTTCTACTCTTGTACAAAAGATGCAGAAGATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGCCAGGAGTTGGTCTGTGTGGTGCTGGGCACGCGCAACGATCTCAAACCAACCACGGCCATGTCGGACGGCATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAAGCATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGACATTGCCGACGAACCTCAGGCCGAGTTTGGCACCGNCTACGACAAAGCGCCCGGGCCATTCGCGGGTCCATCGTACCAAGCTCGATCTCGGCCAATTTCCTCGTGGACTGCCTGTTCGATGACGGCACATGCGGGGAAAGGTTATCGGCATTTGCNACGATTCAGTGATGGCACGTCGAGCGAGTCAT]

[+] EMBL BX468624             [CAAGAATCGGCCGAGGCTGNAAAGCACTATAGCCGTGATTGTACATTTTGGATACGATTGTTCTAGTCTCCCCTCTCGGTTCTACTCTTGTACAAAAGATGCAGAAGATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGCCAGGAGTTGGTCTGTGTGGTGCTGGGCACGCGCAACGATCTCAAACCAACCACGGCCATGTCGGACGGCATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAAGCATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGACATTGCCGACGAACCTCAGGCCGAGTTTGGCACCGNCTACGACAAAGCGCCCGGGCCATTCGCGGGTCCATCGTACCAAGCTCGATCTCGGCCAATTTCCTCGTGGACTGCCTGTTCGATGACGGCACATGCGGGGAAAGGTTATCGGCATTTGCNACGATTCAGTGATGGCACGTCGAGCGAGTCAT]


>consensus_9579#2 CAAGAATCGGCCGAGGCTGNAAAGCACTATAGCCGTGATTGTACATTTTGGATACGATTG TTCTAGTCTCCCCTCTCGGTTCTACTCTTGTACAAAAGATGCAGAAGATTGTCTTTTTCG GCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCG TTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGC TGGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGCCAGGAG TTGGTCTGTGTGGTGCTGGGCACGCGCAACGATCTCAAACCAACCACGGCCATGTCGGAC GGCATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGT CTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAAGCATTAA CGGGGAGCACCGCCGCATGCTGGAGACGGTTGAAGGGCTGCGGGTTGGAGTACCGGGCCG TGCTGCCACCGACATTGCCGACGAACCTCAGGCCGAGTTTGGCACCGNCTACGACAAAGC GCCCGGGCCATTCGCGGGTCCATCGTACCAAGCTCGATCTCGGCCAATTTCCTCGTGGAC TGCCTGTTCGATGACGGCACATGCGGGGAAAGGTTATCGGCATTTGCNACGATTCAGTGA TGGCACGTCGAGCGAGTCAT



consensusID : consensus_9579#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 734
fasta sequence
                              [GCACGAATNGCCCCGAGGTTNATGCAGAAGATTGTCTTTTTCGTGCGTGCACGGCATGTCCTGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCTGTTCGTTTGCTGGTGCGCAACGAGTGCGACCTGTTCCTGGAAGATTTCAAAGCAAATGTGTCGAGCTGGTGCACGTGGTGATGTAACTGAACTGTTGTGATGTGACTGTGAACGAAATGCTGGTCTGCCTGGTCATGTGACATTTGGTCTTGTGTAGTTGCTTTGTGCACTGCGCAACTGACTCTCAAACCAACCACTGTGCTAATTGTCTGTGACTGGTATTGTACCGAACATACATACTGCTCTGCATAATAGAAATGGTGAAAAGCATATACGACTTGGAGAGGAAAAGTATATTATACACTGTACTTGTCNTNTGTNCGTACCAGTATACCCCTTGNTATCCANTTGGGAACACCTGNTGTAACCNCACAAACGNAGGAGTTAGGACNACCTGGTGNCCCACCAAATAACCTTACTTATCNGNTTAACCGACAACGACTTATTCAACAAACAGGAGACGAGGCAAAGAACAAACNCACTAGGAACCCCTGAGACACAATTTGCCCCTTCNGTGAGATATGAAAACACTGTAGCTTANNTACAACAACGAGCTGGNACTTNAGGACACAGAGGAGNGTTANANAGGGNGGAAAGGTTATAATACACCTNGAGNNAGANNACCCGGN]

[+] EMBL AL930007             [GCACGAATNGCCCCGAGGTTNATGCAGAAGATTGTCTTTTTCGTGCGTGCACGGCATGTCCTGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCTGTTCGTTTGCTGGTGCGCAACGAGTGCGACCTGTTCCTGGAAGATTTCAAAGCAAATGTGTCGAGCTGGTGCACGTGGTGATGTAACTGAACTGTTGTGATGTGACTGTGAACGAAATGCTGGTCTGCCTGGTCATGTGACATTTGGTCTTGTGTAGTTGCTTTGTGCACTGCGCAACTGACTCTCAAACCAACCACTGTGCTAATTGTCTGTGACTGGTATTGTACCGAACATACATACTGCTCTGCATAATAGAAATGGTGAAAAGCATATACGACTTGGAGAGGAAAAGTATATTATACACTGTACTTGTCNTNTGTNCGTACCAGTATACCCCTTGNTATCCANTTGGGAACACCTGNTGTAACCNCACAAACGNAGGAGTTAGGACNACCTGGTGNCCCACCAAATAACCTTACTTATCNGNTTAACCGACAACGACTTATTCAACAAACAGGAGACGAGGCAAAGAACAAACNCACTAGGAACCCCTGAGACACAATTTGCCCCTTCNGTGAGATATGAAAACACTGTAGCTTANNTACAACAACGAGCTGGNACTTNAGGACACAGAGGAGNGTTANANAGGGNGGAAAGGTTATAATACACCTNGAGNNAGANNACCCGGN]


>consensus_9579#3 GCACGAATNGCCCCGAGGTTNATGCAGAAGATTGTCTTTTTCGTGCGTGCACGGCATGTC CTGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCTGTTCGTTTGCTGGTG CGCAACGAGTGCGACCTGTTCCTGGAAGATTTCAAAGCAAATGTGTCGAGCTGGTGCACG TGGTGATGTAACTGAACTGTTGTGATGTGACTGTGAACGAAATGCTGGTCTGCCTGGTCA TGTGACATTTGGTCTTGTGTAGTTGCTTTGTGCACTGCGCAACTGACTCTCAAACCAACC ACTGTGCTAATTGTCTGTGACTGGTATTGTACCGAACATACATACTGCTCTGCATAATAG AAATGGTGAAAAGCATATACGACTTGGAGAGGAAAAGTATATTATACACTGTACTTGTCN TNTGTNCGTACCAGTATACCCCTTGNTATCCANTTGGGAACACCTGNTGTAACCNCACAA ACGNAGGAGTTAGGACNACCTGGTGNCCCACCAAATAACCTTACTTATCNGNTTAACCGA CAACGACTTATTCAACAAACAGGAGACGAGGCAAAGAACAAACNCACTAGGAACCCCTGA GACACAATTTGCCCCTTCNGTGAGATATGAAAACACTGTAGCTTANNTACAACAACGAGC TGGNACTTNAGGACACAGAGGAGNGTTANANAGGGNGGAAAGGTTATAATACACCTNGAG NNAGANNACCCGGN



consensusID : consensus_9579#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 633
fasta sequence
                              [CCGCCCACGCGTCCGCCGCGAAGCACTACAGCCGTGATTGTAATTTTAGATACGATTGTTCTAGTCTCCCCTCTCGGTTCTACTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGTATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCT-GTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTC]

[+] EMBL BM596547             [CCGCCCACGCGTCCGCCGCGAAGCACTACAGCCGTGATTGTAATTTTAGATACGATTGTTCTAGTCTCCCCTCTCGGTTCTACTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGTATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCT GTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCT ]
[+] EMBL BM608367             [                            ccGCCGTGATTGTAATTTTAGATACGATTGTTCTAGTCTCCCCTCTCGGTTCTACTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGTATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCT GTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCCGGCCATTCGCGGTCCATCTCCAAGCTCGATCTC]
[+] EMBL AGA283533            [                                       ttttTTTTGGATACGATTGTTCTAGTCTCCCCTCTCAGTTCTACTGTTGTACAAAAGATGCAGAAGATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGTATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCT GTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCAT                                                                                                                                           ]
[+] EMBL BX623839             [                                                                              TCTACTGTTGTACAAAAGATGCAGAAGATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTGGTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGTATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTNGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGC                                                                                                                        ]


>consensus_9579#4 CCGCCCACGCGTCCGCCGCGAAGCACTACAGCCGTGATTGTAATTTTAGATACGATTGTT CTAGTCTCCCCTCTCGGTTCTACTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGC GGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGGCTGTCCGTT CGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTG GTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGTCAGGAATTG GTCTGTGTAGTGCTTGGCACGCGCAACGATCTCAAACCAACCACGGCAATGTCGGACGGT ATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTG TCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGG GAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTG CCACCGCACATTGCCGACGAACCTCAGGCCGAGTTTGCCACCGCCTACGACAAAGCGCCC GGCCATTCGCGGTCCATCTCCAAGCTCGATCTC



consensusID : consensus_9579#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 575
fasta sequence
                              [CCGCGTGATTGTAATTTTGGATACGATTGTTCTAGTCTCCCCTCTCGGTTCTACTCTTGTACAAAAGATGCAGAAGATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGTTTCATTGCAGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGCCAGGAGTTGGTCTGTGTGGTGCTGGGCACGCGCAACGATCTCAAACCAACCACGGCCATGTCGGACGGCATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGGCGAGTTTGCCACCGCCTACGACA]

[+] EMBL BM608914             [CCGCGTGATTGTAATTTTGGATACGATTGTTCTAGTCTCCCCTCTCGGTTCTACTCTTGTACAAAAGATGCAGAAGATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGTTCGGTACGCACTGAAAAAGGGTTTCATTGCAGGGCTGTCCGTTCGTTTGCTGGTGCGCAACGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAACGAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGCCAGGAGTTGGTCTGTGTGGTGCTGGGCACGCGCAACGATCTCAAACCAACCACGGCCATGTCGGACGGCATGTCGAACATCATCGCCGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCATGGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCTGGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGACGAACCTCAGGGCGAGTTTGCCACCGCCTACGACA]


>consensus_9579#5 CCGCGTGATTGTAATTTTGGATACGATTGTTCTAGTCTCCCCTCTCGGTTCTACTCTTGT ACAAAAGATGCAGAAGATTGTCTTTTTCGGCGGCACCGGCATGTCCGGCCAATGTGCGGT TCGGTACGCACTGAAAAAGGGTTTCATTGCAGGGCTGTCCGTTCGTTTGCTGGTGCGCAA CGAGGCGACCGTTCCGGAAGATTTCAAAGCAAAGGTCGAGCTGGTGCAGGGTGATGTAAC GAACGTGGAGGACGTGAAGAAAGCGGTCGCCGGCCAGGAGTTGGTCTGTGTGGTGCTGGG CACGCGCAACGATCTCAAACCAACCACGGCCATGTCGGACGGCATGTCGAACATCATCGC CGCTATGAAGGAAGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTTCAT GGACCCGGACAAGGTGCCGGCCATCTTTGTCAACATTAACGGGGAGCACCGCCGCATGCT GGAGACGGTGAAGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCCACCGCACATTGCCGA CGAACCTCAGGGCGAGTTTGCCACCGCCTACGACA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9579#0      GCTGTTGATTCCTCGAGAACTGTTGGCCCACTGGTGAGCCGAGTTTGAATTCGCATTCTA 60
consensus_9579#1      ------------------------------------------------------------
consensus_9579#4      ------------------------------------------------------------
consensus_9579#2      ------------------------------------------------------------
consensus_9579#5      ------------------------------------------------------------
consensus_9579#3      ------------------------------------------------------------
                                                                                  

consensus_9579#0      TTGCCCCCTCGTTATCCGGCTGATAATAAAAAGCAATATTTATTCAGTCTCGACACCGCG 120
consensus_9579#1      --AAAAATACGAAATTCCTCGAGCACTGTTGGCCAACTGGAATTCAGTCTCGACACCGCG 58
consensus_9579#4      ---------------------------------------CCGCCCACGCGTC-CGCCGCG 20
consensus_9579#2      -------------------------------------CAAGAATCGGCCGAG--GCTGNA 21
consensus_9579#5      ------------------------------------------------------------
consensus_9579#3      ------------------------------------------------------------
                                                                                  

consensus_9579#0      AAGCACTACAGCCGTGATTGTA-ATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTT 179
consensus_9579#1      AAGCACCACAGCCGTGATTGTA-ATTTTGGATACGATTGTTCTAGTTTCCCCTCTCCGTT 117
consensus_9579#4      AAGCACTACAGCCGTGATTGTA-ATTTTAGATACGATTGTTCTAGTCTCCCCTCTCGGTT 79
consensus_9579#2      AAGCACTATAGCCGTGATTGTACATTTTGGATACGATTGTTCTAGTCTCCCCTCTCGGTT 81
consensus_9579#5      ---------CCGCGTGATTGTA-ATTTTGGATACGATTGTTCTAGTCTCCCCTCTCGGTT 50
consensus_9579#3      --------------------------------------------------------GCAC 4
                                                                                  

consensus_9579#0      CTACTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGCGGCAC-CGGCATGTCC-GG 237
consensus_9579#1      CTACTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGCGGCAC-CGGCATGTCC-GG 175
consensus_9579#4      CTACTGTTGTACAAAAGATGCAGAAAATTGTCTTTTTCGGCGGCAC-CGGCATGTCC-GG 137
consensus_9579#2      CTACTCTTGTACAAAAGATGCAGAAGATTGTCTTTTTCGGCGGCAC-CGGCATGTCC-GG 139
consensus_9579#5      CTACTCTTGTACAAAAGATGCAGAAGATTGTCTTTTTCGGCGGCAC-CGGCATGTCC-GG 108
consensus_9579#3      GAATNGCCCCGAGGTTNATGCAGAAGATTGTCTTTTTCGTGCGTGCACGGCATGTCCTGG 64
                        *              ******** *************   *  * ********** **

consensus_9579#0      CCAATGTGCGGTTCGGTATGCACTGAAAAAGGG------------GCTGTCC-GTTCGTT 284
consensus_9579#1      CCAATGTGCGGTTCGGTATGCACTGAAAAAGGG------------GCTGTCC-GTTCGTT 222
consensus_9579#4      CCAATGTGCGGTTCGGTACGCACTGAAAAAGGG------------GCTGTCC-GTTCGTT 184
consensus_9579#2      CCAATGTGCGGTTCGGTACGCACTGAAAAAGGG------------GCTGTCC-GTTCGTT 186
consensus_9579#5      CCAATGTGCGGTTCGGTACGCACTGAAAAAGGGTTTCATTGCAGGGCTGTCC-GTTCGTT 167
consensus_9579#3      CCAATGTGCGGTTCGGTACGCACTGAAAAAGGG------------GCTGTCCTGTTCGTT 112
                      ****************** **************            ******* *******

consensus_9579#0      TGCTGGTGCGCAACGAG-GCGACC-GTTCC-GGAAGATTTCAAAGCAAAGGT--CGAGCT 339
consensus_9579#1      TGCTGGTGCGCAACGAG-GCGACC-GTTCC-GGAAGATTTCAAAGCAAAGGT--CGAGCT 277
consensus_9579#4      TGCTGGTGCGCAACGAG-GCGACC-GTTCC-GGAAGATTTCAAAGCAAAGGT--CGAGCT 239
consensus_9579#2      TGCTGGTGCGCAACGAG-GCGACC-GTTCC-GGAAGATTTCAAAGCAAAGGT--CGAGCT 241
consensus_9579#5      TGCTGGTGCGCAACGAG-GCGACC-GTTCC-GGAAGATTTCAAAGCAAAGGT--CGAGCT 222
consensus_9579#3      TGCTGGTGCGCAACGAGTGCGACCTGTTCCTGGAAGATTTCAAAGCAAATGTGTCGAGCT 172
                      ***************** ****** ***** ****************** **  ******

consensus_9579#0      GG--TGCAGGGTGATGTAA-CGAAC----GTG--GAGGACGTGAAGAAAGCGGTCGCCGG 390
consensus_9579#1      GG--TGCAGGGTGATGTAAACGAAC----GTG--GAGGACGTGAAGAAAGCGGTCGCCGG 329
consensus_9579#4      GG--TGCAGGGTGATGTAA-CGAAC----GTG--GAGGACGTGAAGAAAGCGGTCGCCGG 290
consensus_9579#2      GGG-TGCAGGGTGATGTAA-CGAAC----GTG--GAGGACGTGAAGAAAGCGGTCGCCGG 293
consensus_9579#5      GG--TGCAGGGTGATGTAA-CGAAC----GTG--GAGGACGTGAAGAAAGCGGTCGCCGG 273
consensus_9579#3      GGTGCACGTGGTGATGTAACTGAACTGTTGTGATGTGACTGTGAACGAAATGCTGGTCTG 232
                      **    *  **********  ****    ***  * *   *****  **  * * * * *

consensus_9579#0      TCAGG---------AATTGGTCT-GTGTAGT-GCTTGGCAC---GCGCAACGA--TCTCA 434
consensus_9579#1      TCAGG---------AATTGGTCT-GTGTAGT-GCTTGGCAC---GCGCAACGA--TCTCA 373
consensus_9579#4      TCAGG---------AATTGGTCT-GTGTAGT-GCTTGGCAC---GCGCAACGA--TCTCA 334
consensus_9579#2      CCAGG---------AGTTGGTCT-GTGTGGT-GCTGGGCAC---GCGCAACGA--TCTCA 337
consensus_9579#5      CCAGG---------AGTTGGTCT-GTGTGGT-GCTGGGCAC---GCGCAACGA--TCTCA 317
consensus_9579#3      CCTGGTCATGTGACATTTGGTCTTGTGTAGTTGCTTTGTGCACTGCGCAACTGACTCTCA 292
                       * **         * ******* **** ** ***  *  *   *******    *****

consensus_9579#0      AACCAACCACGG----------CAATGTCGGACGGCATGTCGAACATCATCGCCGCTATG 484
consensus_9579#1      AACCAACCACGG----------CAATGTCGGACGGCATGTCGAACATCATCGCCGCTATG 423
consensus_9579#4      AACCAACCACGG----------CAATGTCGGACGGTATGTCGAACATCATCGCCGCTATG 384
consensus_9579#2      AACCAACCACGG----------CCATGTCGGACGGCATGTCGAACATCATCGCCGCTATG 387
consensus_9579#5      AACCAACCACGG----------CCATGTCGGACGGCATGTCGAACATCATCGCCGCTATG 367
consensus_9579#3      AACCAACCACTGTGCTAATTGTCTGTGACTGGTATTGTACCGAACATACATACTGCTCTG 352
                      ********** *          *  ** * *      *  *******     * *** **

consensus_9579#0      AAGGA-AGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTT---CA-TGG 539
consensus_9579#1      AAGGA-AG-TTCGCTGAAGAAGTTTTCCGTCTTTCTGTCGTCGTTCCTGTT---CA-TGG 477
consensus_9579#4      AAGGA-AGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTT---CA-TGG 439
consensus_9579#2      AAGGA-AGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTT---CA-TGG 442
consensus_9579#5      AAGGA-AGCTTCGCTGAAGAAGTTTTCCGTCTGTCTGTCGTCGTTCCTGTT---CA-TGG 422
consensus_9579#3      CATAATAGAAATGGTGAAAAGCATATACGACTTGGAGAGGAAAAGTATATTATACACTGT 412
                       *  * **    * **** *   * * ** **    *  *       * **   ** ** 

consensus_9579#0      ACCCGGACAAGGTGCCGGCCA---TCTTTGTCAA-CATTAACGGGGAGCACC-GCCGCAT 594
consensus_9579#1      ACCCGGACAAGGTGCCGGCCA---TCTTTGTCAA-CATTAACGGGGAGCACC-GCCGCAT 532
consensus_9579#4      ACCCGGACAAGGTGCCGGCCA---TCTTTGTCAA-CATTAACGGGGAGCACC-GCCGCAT 494
consensus_9579#2      ACCCGGACAAGGTGCCGGCCA---TCTTTGTCAAGCATTAACGGGGAGCACC-GCCGCAT 498
consensus_9579#5      ACCCGGACAAGGTGCCGGCCA---TCTTTGTCAA-CATTAACGGGGAGCACC-GCCGCAT 477
consensus_9579#3      ACTTGTCNTNTGTNCGTACCAGTATACCCCTTGNTATCCANTTGGGAACACCTGNTGTAA 472
                      **  *      ** *   ***   *     *        *   **** **** *  * * 

consensus_9579#0      GCTGG-AGACGGT-GA---AGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCC-ACCGCA 648
consensus_9579#1      GCTGG-AGACGGT-GA---AGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCC-ACCGCA 586
consensus_9579#4      GCTGG-AGACGGT-GA---AGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCC-ACCGCA 548
consensus_9579#2      GCTGG-AGACGGTTGA---AGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCC-ACCG-A 552
consensus_9579#5      GCTGG-AGACGGT-GA---AGGGCTGCGGGTTGGAGTACCGGGCCGTGCTGCC-ACCGCA 531
consensus_9579#3      CCNCACAAACGNAGGAGTTAGGACNACCTGGTGNCCCACCAAATAACCTTACTTATCNGN 532
                       *    * ***   **   *** *  *  * **    ***         * *  * *   

consensus_9579#0      C--ATTGCCGACGAACCTCAGGCCGAGTTTGCCACC--GCCTACGACAAA-GCGCCCGG- 702
consensus_9579#1      C--ATTGCCGACGAACCTCAGGCCGAGTTTGCCACC--GCCTACGACAAA-GCGCCCGG- 640
consensus_9579#4      C--ATTGCCGACGAACCTCAGGCCGAGTTTGCCACC--GCCTACGACAAA-GCGCCCGG- 602
consensus_9579#2      C--ATTGCCGACGAACCTCAGGCCGAGTTTGGCACC--GNCTACGACAAA-GCGCCCGGG 607
consensus_9579#5      C--ATTGCCGACGAACCTCAGGGCGAGTTTGCCACC--GCCTACGACA------------ 575
consensus_9579#3      TTAACCGACAACGACTTATTCAACAAACAGGAGACGAGGCAAAGAACAAACNCACTAGGA 592
                         *  * * ****         * *    *  **   *   *  ***            

consensus_9579#0      CCATTCGCGG-TCCATCT--CCAAGCT-CGATCTCGGCCAATT-CCTCGTGGACTGCCTG 757
consensus_9579#1      CCATTCGCGG-TCCATCT--CCAAGCT-CGATCTCGGCCAATT-CCTCGTGGACTGCCTG 695
consensus_9579#4      CCATTCGCGG-TCCATCT--CCAAGCT-CGATCTC------------------------- 633
consensus_9579#2      CCATTCGCGGGTCCATCGTACCAAGCT-CGATCTCGGCCAATTTCCTCGTGGACTGCCTG 666
consensus_9579#5      ------------------------------------------------------------
consensus_9579#3      ACCCCTGAGACACAATTTGCCCCTTCNGTGAGATATGAAAACACTGTAGCTTANNTACAA 652
                                                                                  

consensus_9579#0      TTCGATGA-GGCACATGCGGG-AAAGGTTATCGGCATTTGCA-CGATTAAGTGATG-CAC 813
consensus_9579#1      TTCGATGA-GGCACATGCGGG-AAAGGTTATCGGCATTTGCA-CGATTAAGTGATG-CAC 751
consensus_9579#4      ------------------------------------------------------------
consensus_9579#2      TTCGATGACGGCACATGCGGGGAAAGGTTATCGGCATTTGCNACGATTCAGTGATGGCAC 726
consensus_9579#5      ------------------------------------------------------------
consensus_9579#3      CAACGAGCTGGNACTTNAGGACACAGAGGAGNGTTANANAGGGNGGAAAGGTTATAATAC 712
                                                                                  

consensus_9579#0      -TCGAGCGACTCATCTCTTGAAGGCTTCGCCGTCTTCTTCTGCTTTGTTGCACAAAATAT 872
consensus_9579#1      -TCGAGCGACTCATCTCTTGTAAAGT-CGCCGTCTTCTTCTGCTTT-TTGCACAAAATAT 808
consensus_9579#4      ------------------------------------------------------------
consensus_9579#2      GTCGAGCGAGTCAT---------------------------------------------- 740
consensus_9579#5      ------------------------------------------------------------
consensus_9579#3      ACCTNGAGNNAGANNACCCGGN-------------------------------------- 734
                                                                                  

consensus_9579#0      AATCCTCACTCGAGAGGCGGTTGGATGCCTCTTTTCCGCTGAAAAAAAAAAAAAAAAAAA 932
consensus_9579#1      AATCCTCACTCGAGAGGCGGTTGGATGCCTCTTTTCCGC--------------------- 847
consensus_9579#4      ------------------------------------------------------------
consensus_9579#2      ------------------------------------------------------------
consensus_9579#5      ------------------------------------------------------------
consensus_9579#3      ------------------------------------------------------------
                                                                                  

consensus_9579#0      CAAATGTTCCCCAGCTTCT 951
consensus_9579#1      -------------------
consensus_9579#4      -------------------
consensus_9579#2      -------------------
consensus_9579#5      -------------------
consensus_9579#3      -------------------
                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)