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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9581#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 2006 fasta sequence
[TCAGGCAGAATNGGCCCGAGGGNCTATAACGGCATGACAACAACGATCAAACTACGAGATGTGCTTCCGGGCGGAGAATGTGGTGCTACCGAAGACGGGCTACTTTGGCCTGTCGGCGGCGACCGGTGGCCTGGCGGACGATCACGACGTGTTCCACTTCCTCACCACCTCGCGTCCACATCCCCGGCCAGTTCAAGGAGGAACCGGCACCGGGCGAGGATGCGGCCAAGCTCACGCAAGAGTACCAGGACTACCAGAAGAAGCTCGAGCTGCAGAAGGAAGAGTACCGCAAGGAGCATCCGGACGAGCAGAAGGACGACCTGGACAGCCTGTTCGAGGACTTTAACGAGCGCGAGCTGCGCCAAATCTGGGAAGCGCAGACCAACACGTTCGAACAGCTGCGCACGCTCAGCTCCAAGCTGGACGAGGTGATTGGGCGCCAGGAGCGCACGCTCGGTTTGCTGTCGGTCTCGGCCCAGGCGGGTGGAGCGGCCGGCGGGGCACCTCCGCCACAAATTGCCGTTGGTGGTGGTGGTGCGGCCGGTGGCAGTTCGATCATGCGGCACGAGGTGGACGCGCTGCTGCAGAATCAGAACGTAATGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACAGTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATGTGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGAC--AAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATC------CTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTATGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGCACCACAGCATAGAAAAAAGGCACATTTATTTCCAATGTGAGTGAATATGTTTTATTACCAATATGCTCACT-CCCCGATGATTTGTGCCT--TGTGTGTGTGTTGACTTAAGATGAGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAATTTTGATGTGTTTTTGCTGTCAATGGTTGTGTCTCGTTTTTTTTTTCTTTTTTACACGAGAGAGTGCTGCTTTAGCTATGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGAGTGTTGTGAAATTTAACTGCTGGTGGGATGGCATAGGTATCACGTTCTGATCAATGAAAACGAACTGTTTGATGGGCAAAACAAAAAAAAAACAAACAAAATACAATACATTCTTTCAGCTCAAATAGTATCCATCTTCCACCATTTCCTGTATTCGATCTAATACCGCTGGAGATAAGAGCGTGTAAAGTTAACACAATGTTTAGAAAAGAAAACTCCCACAAGCATATGTTGTCTGCGATTCATGTTTCTACTTAAGTGGGTTGTTTTTTTTATAGATGCATTTGAACTGTCTGGGGAAGCAGAAGAAGTACGTTCGATTAAGTAAACCTATCTAGCTTATATAAAAAAAAAACAATCGAGCATTTGTGAGCGTTCACTACTATCCTATTCATGTGTTTTGAGTTTTCCAATGTTACTCTGCTGTGTTAAGTGTAGTGTAAATTTTTCTTTCTATCACCCGTATACAACAAAACGAACGAGAAAAAAACGAACAGGAAAATAAACAGTCTGCTACAATGTGCANGTAAAAAAAA]
[+] EMBL BX466317 [TCAGGCAGAATNGGCCCGAGGGNCTATAACGGCATGACAACAACGATCAAACTACGAGATGTGCTTCCGGGCGGAGAATGTGGTGCTACCGAAGACGGGCTACTTTGGCCTGTCGGCGGCGACCGGTGGCCTGGCGGACGATCACGACGTGTTCCACTTCCTCACCACCTCGCGTCCACATCCCCGGCCAGTTCAAGGAGGAACCGGCACCGGGCGAGGATGCGGCCAAGCTCACGCAAGAGTACCAGGACTACCAGAAGAAGCTCGAGCTGCAGAAGGAAGAGTACCGCAAGGAGCATCCGGACGAGCAGAAGGACGACCTGGACAGCCTGTTCGAGGACTTTAACGAGCGCGAGCTGCGCCAAATCTGGGAAGCGCAGACCAACACGTTCGA ]
[+] EMBL BM630437 [ ccgACGAGATGTGCTTCCGGGCGGAGAATGTGGTGCTACCGAAGACGGGCTACTTTGGCCTGTCGGCGGCGACCGGTGGCCTGGCGGACGATCACGACGTGTTCCACTTCCTCACCACCTCGC TCCACATCCCCGGCCAGTTCAAGGAGGAACCGGCACCGGGCGAGGATGCGGCCAAGCTCACGCAAGAGTACCAGGACTACCAGAAGAAGCTCGAGCTGCAGAAGGAAGAGTACCGCAAGGAGCATCCGGACGAGCAGAAGGACGACCTGGACAGCCTGTTCGAGGACTTTAACGAGCGCGAGCTGCGCCAAATCTGGGAAGCGCAGACCAACACGTTCGAACAGCTGCGCACGCTCAGCTCCAAGCTGGACGAGGTGATTGGGCGCCAGGAGCGCACGCTCGGTTTGCTGTCGGTCTCGGCCCAGGCGGGTGGAGCGGCCGGCGGGGCACCTCCGCCACAAATTGCCGTTGGTGGTGGTGGTGCGGCCGGTGGCAGTTCGATCATGCGGCACGAGGTGGACGCGCTGCTGCAGAATCAGAACGTAATGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACAGTATTATGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATGTGCAAA ]
[+] EMBL BM605559 [ ccGCAGAAGGACGACCTGGACAGCCTGTTCGAGGACTTTAACGAGCGCGAGCTGCGCCAAATCTGGGAAGCGCAGACCAACACGTTCGAACAGCTGCGCACGCTCAGCTCCAAGCTGGACGAGGTGATTGGGCGCCAGGAGCGCACGCTCGGTTTGCTGTCGGTCTCGGCCCAGGCGGGTGGGGCGGCCGGCGGGGCACCTCCGCCACAAATTGCCGTTGGTGGTGGTGGTGCGGCCGGTGGCAGTTCGATCATGCGGCACGAGGTGGACGCGCTGCTGCAGAATCAGAACGTAATGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACAGTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATATGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTATCGATCGTTGCGATCGCGAC AAAAA ]
[+] EMBL BX607382 [ GAGCGGCCGGCGGGGCACCTCCGCCACAAATTGCCGTTGGTGGTGGTGGTGCGGCCGGTGGCAGTTCGATCATGCGGCACGAGGTGGACGCGCTGCTGCAAAATCAGAACGTAATGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACAGTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATGTGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAATGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGAC AAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATC CTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTATGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGCACCACAGCATAGAAAAAAGGCACATTTATTTCCAATGTGAGTGAATATGTTTTATTACCAATATGCTCACT CCCCGATGATTTGTGCCTTGTGTGTGTGTGTTGACTTAAGAT ]
[+] EMBL BM637586 [ cCGCGCTGCTGCAGAATCAGAACGTAATGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACAGTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATATGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAG ]
[+] EMBL BX621954 [ ttcgATTGGTGAGGTGCACGCACGAACGGACAGTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATATGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTATCGATCGTTGCGATCGCGACAAAAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATCCTCTCTCTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTGTGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGCACCACAGCATAGAAAAAAGGCACATTTATCTCCAATGTGAGTGAATATGTTTTATTACCAATATGCTCACT CCCCGATGATTTGTGCCT TGTGTGTGTGTTGACTTAAGATGAGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAATTTTGATGTGTTTTTGCT ]
[+] EMBL BX620973 [ ATTATGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATGTGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGAGTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTANNGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGAC AAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATC CTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTGTGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGCACCACAGCATAGAAAAAAGGCACATTTATTTCCAATGTGAGTGAATATGTTTTATTACCAATATGCTCACTCCCCCGATGATT ]
[+] EMBL AGA284962 [ GTCCGGCAAGGTGTGGCGAGTGTTGCCCAAATGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTTATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGAC AAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATC CTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTATGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGT ]
[+] EMBL BX618642 [ CTACAAACGCACGGTGCCGTACCGCAAGCGCAAGGATCGGTACAGTGTCCGACGCAGAACTGTCTCAGCTCGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGCTCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCATGCGAAAAAGTTTTATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGAC AAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATC CTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTATGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTAC ]
[+] EMBL BX623003 [ TATCGATCGTTGCGATCGCGACAAAAAAAAACGGAGATAGACTTTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACCCCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATCCTCTCTCTCTCTCTCTCTCTTCCAGCTCCTGTAGTAGTGTGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGCACCACAGCATAGAAAAAAGGCACATTTATCTCCAATGTGAGTGAATATGTTTTATTACCAATATGCTCACT CCCCGATGATTTGTGCCT TGTGTGTGTGTTGACTTAAGATGAGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAATTTTGATGTGTTTTTGCTGTCAATGGTTGTGTCTCGTTTTTTTTTTCTTTTTTACACGAGAGAGTGCTGCTTTAGCTATGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGAGTGTTGTGAAATTTAACTGCTGGTGGGATGGCATAGGTATCACGTTCTGATCAATGAAAACGAACTGTTTGATG ]
[+] EMBL BX612567 [ GTTATAAAATAGTAATCTTAAGCCATCTGGTAAATTTTGATGTGTTTTTGCTGTCAATGGTTGTGTCTCGTTTTTTTTTTCTTTTTTACACGAGAGAGTGCTGCTTTAGCTATGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGAGTGTTGTGAAATTTAACTGCTGGTGGGATGGCATAGGTATCACGTTCTGATCAATGAAAACGAACTGTTTGATGGGCAAAACAAAAAAAAAACAAACAAAATACAATACATTCTTTCAGCTCAAATAGTATCCATCTTCCACCATTTCCGGTATTCGAT ]
[-] EMBL CNS09JT4 [ atcCTTAAGCCATCTGGTAAATTTTGATGTGTTTTTGCTGTCAATGGTTGTGTCTCG TTTTTTTTTCTTTTTTACACGAGAGAGTGCTGCTTTAGCTATGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGAGTGTTGTGAAATTTAACTGCTGGTGGGACGGCATAGGTATCACGTTCTGATCAATGAAAACGAACTGTTTGATGGGCAAAAC AAAAAAACAAACAAAATACAATACATTC ]
[+] EMBL BX613006 [ GCCATCTGGTAAATTTTGATGTGTTTTTGCTGTCAATGGTTGTGTCTCG TTTTTTTTTCTTTTTTACACGAGAGAGTGCTGCTTTAGCTATGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGAGTGTTGTGAAATTTAACTGCTGGTGGGATGGCATAGGTATCACGTTCTGATCAATGAAAACGAACTGTTTGATGGGCAAAACAAAAAAAAAACAAACAAAATACAATACATTCTTTCAGCTCAAATAGTATCCATCTTCCACCATTTCCTGTATTCGATCTAATACCGCTGGAGATAAGAGCGTGTAAAGTTAACACAATGTTTAGAAAAGAAAACTCCCACAAGCATATGTTGTCTGCGATTCATGTTTCTACTTAAGTGGGTTGTTTTTTTTATAGATGCATTTGAACTGTCTGGGGAAGCAGAAGAAGTACGTTCGATTAAGTAAACCTATCTAGCTTATATAAAAAAAAAACAATCGAGCATTTGTGAGCGTTCACTACTATCCTATTCATGTGTTTTGAGTTTTCCAATGTTACTCTGCTGTGTTAAGTGTAGTGTAAATTTTTCTTTCTATCACCCGTATACAACAAAACGAACGAGAAAAAAACGAACAGGAAAATAAACAGTCT ]
[-] EMBL AGA283673 [ CAAATAGTATCCATCTTCCACCATTTCCTGTATTCGATCTAATACCGCTGGAGATAAGAGCGTGTAAAGTTAACACAATGTTTAGAAAAGAAAACTCCCACAAGCATATGTTGTCTGCGATTCATGTTTCTACTTAAGTGGGTTGTTTTTTTTATAGATGCATTTGAACTGTCTGGGGAAGCAGAAGAAGTACGTTCGATTAAGTAAACCTATCTAGCTTATATAAAAAAAAAACAATCGAGCATTTGTGAGCGTTCACTACTATCCTATTCATGTGTTTTGAGTTTTCCAATGTTACTCTGCTGTGTTAAGTGTAGTGTAAATTTTTCTTTCTATCACCCGTATACAACAAAACGAACGAGAAAAAAACGAACAGGAAAATAAACAGTCTGCTACAATGTGCANGTAAAAAAAA]
consensusID : consensus_9581#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 715 fasta sequence
[CTACGCGCTCCCCTGCCGAAACACTTTCCGAAAATGTTTCCCAAAGGGTTGACGTGTAGCGGATCCGCGGCCTCTCTGCTGCTGATAGGGCTGCTGGTGGCCCTCGGCACCAACCTGGAACGAGTGAGCGGCGACGCGGGACTGGTGCACCGGCGATTCGAGTACAAATACTCCTTCAAACCTCCGTACCTGGCGCAGAAAGATGGCACGGTCCCGTTCTGGGAGTACGGCGGTCATGCAATTGCCAGCTCGGAAAACGTGCGCATTGCACCGTCCCTGCGCAG-CAGAAGGGAGCCATTTGGACGAAGCAGAAGACCAACTTTGACTGGTGGGAAGTCGAGATCGTGTTCCGAGTGTCCGGCCGAGGCCGAATCGGTGCTGATGGTTTGGCCTTCTGGTACACCCGCTGAGAAGGGAAGCTATCTGGGCGATGTGTTCGGTTCGTCTGACCAGTGGGTCGGTTTGGGCATCTTCTTCGACTCGTTCGATAACGACAACAAACACAACAATCCCTACATTTCGGCCGTGCTAAACGACGGCACGCGGCAGTTTGACCATCAAAACGATGGTTCGACTCAGCTCCTGTCTGGCTGTTTGCGCGATTTCCGAAACAAACCCTTCCCAACACGGGCAAAGATCGAATACTACAACAACATTCTGACCGTCCTGTTCCACAACGGCATGACCAACAACGATCAAAACTACGAGATGTGCT]
[+] EMBL CNS09JT3 [CTACGCGCTCCCCTGCCGAAACACTTTCCGAAAATGTTTCCCAAAGGGTTGACGTGTAGCGGATCCGCGGCCTCTCTGCTGCTGATAGGGCTGCTGGTGGCCCTCGGCACCAACCTGGAACGAGTGAGCGGCGACGCGGGACTGGTGCACCGGCGATTCGAGTACAAATACTCCTTCAAACCTCCGTACCTGGCGCAGAAAGATGGCACGGTCCCGTTCTGGGAGTACGGCGGTCATGCAATTGCCAGCTCGGAAAACGTGCGCATTGCACCGTCCCTGCGCAG CAGAAGGGAGCCATTTGGACGAAGCAGAAGACCAACTTTGACTGGTGGGAAGTCGAGATCGTGTTCCGAGTGTCCGGCCGAGGCCGAATCGGTGCTGATGGTTTGGCCTTCTGGTACACCCGCTGAGAAGGGAAGCTATCTGGGCGATGTGTTCGGTTCGTCTGACCAGTGGGTCGGTTTGGGCATCTTCTTCGACTCGTTCGATAACGACAACAAACACAACAATCCCTACATTTCGGCCGTGCTAAACGACGGCACGCGGCAGTTTGACCATCAAAACGATGGTTCGACT ]
[+] EMBL BM580601 [ CCGGCCGAAACACTTTCCGAAAATGTTTCCCAAAGGGTTGACGTGTAGCGGATCCGCGGCCTCTCTGCTGCTGATAGGGCTGCTGGTGGCCCTCGGCACCAACCTGGAACGAGTGAGCGGCGACGCGGGACTGGTGCACCGGCGATTCGAGTACAAATACTCCTTCAAACCTCCGTACCTGGCGCAGAAAGATGGCACGGTCCCGTTCTGGGAGTACGGCGGTCATGCAATTGCCAGCTCGGAAAACGTGCGCATTGCACCGTCCCTGCGCAGCCAGAAGGGAGCCATTTGGACGAAGCAGAAGACCAACTTTGACTGGTGGGAAGTCGAGATCGTGTTCCGAGTGTCCGGCCGTGGCCGAATCGGTGCTGATGGTTTGGCCTTCTGGTACA CTGCTGAGAAGGGAAGCTATCTGGGCGATGTGTTCGGTTCGTCTGACCAGTGGGTCGGTTTGGGCATCTTCTTCGACTCGTTCGATAACGACAACAAACACAACAATCCCTACATTTCGGCCGTGCTAAACGACGGCACGCGGCAGTTTGACCATCAAAACGATGGTTCGACTCAGCTCCTGTCTGGCTGTTTGCGCGATTTCCGAAACAAACCCTTCCCAACACGGGCAAAGATCGAATACTACAACAACATTCTGACCGTCCTGTTCCACAACGGCATGACCAACAACGATCAAAACTACGAGATGTGCT]
consensusID : consensus_9581#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 632 fasta sequence
[GCAGAATCGCCACGAGGTTGAAAAAAGGCACATTTATTTCCAACTGTGAGTGAATATGTTTTATTACCAATATGCTCACTCCCCGATGATTTGTGCCTTGTGTGTGTGTGTTGACTTAAGATGAGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAAGTTTTGATGTGTTTTTGCGCTGTCAAGTGGTTGTGTCTCGTTTGNTGCTTTCCTATCTTTTACACGGAGAAGAGTGCGTGCGTTTAGCCGTATTGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGANNGTGTTGTGAAATTTAACTGCTTGGTGGGACGGCATAGGTAGTCACGTTCTGATCAATGAAAACGAACTGTTCTCGATCGGGCAAAACAAAGACGAAACACAGACCAAAGAGTACAATACATTGCTTNTGCAGCGTCAAAGTAGTATCCATCTTCCACCATTTCCTGTATTCGGATCTAATACCAGCTGGAAGATAAGAGGCGTGTAACAGGTTAACANAATTGTTTAGAAGACAGAGAGAANCTCCCACGAAAGCATATGTTGCTTATCGAATNGNCAGTGTTTNCGNACGTNTAAGGTGGGCTTGTANNAGACAGCTCGTATTAAGAATGCAG]
[+] EMBL BX469512 [GCAGAATCGCCACGAGGTTGAAAAAAGGCACATTTATTTCCAACTGTGAGTGAATATGTTTTATTACCAATATGCTCACTCCCCGATGATTTGTGCCTTGTGTGTGTGTGTTGACTTAAGATGAGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAAGTTTTGATGTGTTTTTGCGCTGTCAAGTGGTTGTGTCTCGTTTGNTGCTTTCCTATCTTTTACACGGAGAAGAGTGCGTGCGTTTAGCCGTATTGAAGAGAGATCACCTATTTCGGTGTTGTGTTTGANNGTGTTGTGAAATTTAACTGCTTGGTGGGACGGCATAGGTAGTCACGTTCTGATCAATGAAAACGAACTGTTCTCGATCGGGCAAAACAAAGACGAAACACAGACCAAAGAGTACAATACATTGCTTNTGCAGCGTCAAAGTAGTATCCATCTTCCACCATTTCCTGTATTCGGATCTAATACCAGCTGGAAGATAAGAGGCGTGTAACAGGTTAACANAATTGTTTAGAAGACAGAGAGAANCTCCCACGAAAGCATATGTTGCTTATCGAATNGNCAGTGTTTNCGNACGTNTAAGGTGGGCTTGTANNAGACAGCTCGTATTAAGAATGCAG]
consensusID : consensus_9581#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 294 fasta sequence
[GGCTCGACTCAGCTCCTGTCTGGATGTTTGCTGCGATTTCGAAACAAACCTTCCCAACACGGGCAAAGATCGAACTACTACAACAACATTCTGACCGTCCTGTTCCACAAGCAGGGATGAGCAACAACGAGTCAATAGACTAACNAGATGTGCTTCCNGGGACGAGTAGTAANTGTCGGGTGCTAACCAGATGTACGGTGGNTACNTATNTGACCTGCTACTTGGGCCATGCNCGTTGGGNCTGACCGGTGGACTGACCGAGATGATCACAATNNTGCTTCACACATTCTCTCA]
[+] EMBL AL695740 [GGCTCGACTCAGCTCCTGTCTGGATGTTTGCTGCGATTTCGAAACAAACCTTCCCAACACGGGCAAAGATCGAACTACTACAACAACATTCTGACCGTCCTGTTCCACAAGCAGGGATGAGCAACAACGAGTCAATAGACTAACNAGATGTGCTTCCNGGGACGAGTAGTAANTGTCGGGTGCTAACCAGATGTACGGTGGNTACNTATNTGACCTGCTACTTGGGCCATGCNCGTTGGGNCTGACCGGTGGACTGACCGAGATGATCACAATNNTGCTTCACACATTCTCTCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 TCAGGCAGAATNGGCCCGAGGGNCTATAACGGCATGACAACAACGATCAAACTACGAGAT 60
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 GTGCTTCCGGGCGGAGAATGTGGTGCTACCGAAGACGGGCTACTTTGGCCTGTCGGCGGC 120
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 GACCGGTGGCCTGGCGGACGATCACGACGTGTTCCACTTCCTCACCACCTCGCGTCCACA 180
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 TCCCCGGCCAGTTCAAGGAGGAACCGGCACCGGGCGAGGATGCGGCCAAGCTCACGCAAG 240
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 AGTACCAGGACTACCAGAAGAAGCTCGAGCTGCAGAAGGAAGAGTACCGCAAGGAGCATC 300
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 CGGACGAGCAGAAGGACGACCTGGACAGCCTGTTCGAGGACTTTAACGAGCGCGAGCTGC 360
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 GCCAAATCTGGGAAGCGCAGACCAACACGTTCGAACAGCTGCGCACGCTCAGCTCCAAGC 420
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 TGGACGAGGTGATTGGGCGCCAGGAGCGCACGCTCGGTTTGCTGTCGGTCTCGGCCCAGG 480
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 CGGGTGGAGCGGCCGGCGGGGCACCTCCGCCACAAATTGCCGTTGGTGGTGGTGGTGCGG 540
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 CCGGTGGCAGTTCGATCATGCGGCACGAGGTGGACGCGCTGCTGCAGAATCAGAACGTAA 600
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 TGGTGCAAACGGTGCGCGAAATCCGTTCGATCATTGGTGAGGTGCACGCACGAACGGACA 660
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 GTATTCTGAGCAATCAGGCACGGGCACCAACGGCACAGGTGCAGGCGGGCGGGTACGATG 720
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 TGCAAAGCTTGATGAACGAGATGCGCGACGGCATGAACCAGGTCCGGCAAGGTGTGGCGA 780
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 GTGTTGCCCAAAGGCTACAAACGCACGGTGCCGTACCGCAGGCGCAAGGATCGGTACAGT 840
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 GTCCGACGCAGAACTGTCTCAGCTTGACGGCATTCCTGGTGGCAATAGTGGTGCAGCTGC 900
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 TCCTGATGCTAGGTTACAGTATGTATAGGGATAGCCGAGAGGCTCAGGCGAAAAAGTTTT 960
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 ATTAGATAGCAAAATAACTTAACGATCGTTGCGATCGCGACAAAAAAACGGAGATAGACT 1020
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 TTTGTTTGAGCGGTAAGATCAATCAGCGACAGTCGAAACGCAACGTGTACACGAGAAACC 1080
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 CCTGGCAGCCAAAAATACCACCGTTCGTACACTGTCCATCATCCTCTCTCTCTCTCTTCC 1140
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ----------CTACGCGCTCCCCTGCCGAAACACTTTCCGAAAATGTTTCCCAAAGGGTT 50
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 AGCTCCTGTAGTAGTATGTTTTGTACTGTGTGAAACGGATTATTTTGTTTTGTTTTACGC 1200
consensus_9581#2 ----------------------------------------------------GCAGAATC 8
consensus_9581#1 GACGTGTAGCGGATCCGCGGCCTCTCTGCTGCTGATAGGGCTGCTGGTGGCCCTCGGCAC 110
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 ACCACAGCATAGAAAAAAGGCACATTTATTTCCAA-TGTGA-GTGAATATGTTTTATTAC 1258
consensus_9581#2 GCCACGAGGTTGAAAAAAGGCACATTTATTTCCAACTGTGA-GTGAATATGTTTTATTAC 67
consensus_9581#1 CAACCTGGAACGAGTGAGCGGCGACGCGGGACTGGTGCACCGGCGATTCGAGTACAAATA 170
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 CAATATGC--TCACTCCCCGATGATTTGTGCCTTGTGTGTGTGT----TGACTTAAGATG 1312
consensus_9581#2 CAATATGC--TCACTCCCCGATGATTTGTGCCTTGTGTGTGTGTG--TTGACTTAAGATG 123
consensus_9581#1 CTCCTTCAAACCTCCGTACCTGGCGCAGAAAGATGGCACGGTCCCGTTCTGGGAGTACGG 230
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 AGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAA-TTTTGATGTGTTTT 1371
consensus_9581#2 AGGTTTTAGTTGTTATAAAATAGTAATCTTAAGCCATCTGGTAAAGTTTTGATGTGTTTT 183
consensus_9581#1 CGGTCATGCAATTGCCAGCTCGGAAAACGTGCGCATTGCACCGTCCCTGCGCAGCAGAAG 290
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 TGC--TGTCAA-TGGTTGTGTCTCGTTT----TTTTTTTCTTTTTTACACGAG--AGAGT 1422
consensus_9581#2 TGCGCTGTCAAGTGGTTGTGTCTCGTTTGNTGCTTTCCTATCTTTTACACGGAGAAGAGT 243
consensus_9581#1 GGAGCCATTTGGACGAAGCAGAAGACCAACTTTGACTGGTGGGAAGTCGAGATCGTGTTC 350
consensus_9581#3 ------GGCTCGACTCAGCTCCTGTCTGGATGT--TTGCTGCGATTTCGAAACAAACCTT 52
consensus_9581#0 GC-TGC-TTTAGCTAT----GAAGAGAGATCAC--CTATTTCGGTGTTGTGTTTGAGTGT 1474
consensus_9581#2 GCGTGCGTTTAGCCGTA-TTGAAGAGAGATCAC--CTATTTCGGTGTTGTGTTTGANNGT 300
* * * * * * * *
consensus_9581#1 CGAGTGTCCGGCCGAGGCCGAATCGGTGC--TGATGGTTTGGCC-TTCTGGTACACCCGC 407
consensus_9581#3 CCCAACACGGGCAAAGATCGAACTACTACAACAACATTCTGACCGTCCTGTTCCACAAGC 112
consensus_9581#0 --TGTGAAATTTAACTGCT-GGTGGG-ATGGCATAGGTA-TCACGTTCTGATCAATGAAA 1529
consensus_9581#2 GTTGTGAAATTTAACTGCTTGGTGGG-ACGGCATAGGTAGTCACGTTCTGATCAATGAAA 359
* * * *** * *
consensus_9581#1 TGAGAAGGGAAGCTATCTGGGCGATGTGTTCGGTTCGTCTGACCAGTGGGTCGGTTTGGG 467
consensus_9581#3 AGGGATGAGCAACAA-CGAGTCAATAGACTAACNAGATGTGCTTCCNGGGACGAGTAGTA 171
consensus_9581#0 ACGAACTGTTT--GAT--GGGCAAAACAAAAA--AAAAACAAACAAAA-----TACAATA 1578
consensus_9581#2 ACGAACTGTTCTCGATC-GGGCAAAACAAAGACGAAACACAGACCAAAGA--GTACAATA 416
* * * * *
consensus_9581#1 CATCTTCTTCGACTCGTTCGATA-ACGACAACAAACACAACAATCCCTACATTTCGGCC- 525
consensus_9581#3 ANTGTCGGGTG-CTAACCAGATGTACGGTGGNTA-CNTATNTGACCTGCTACTTGGGCC- 228
consensus_9581#0 CATTCTTTCAGC----TCAAA-TAGTATCCATCT-TCCACCATTTCCTGTATTCG-ATCT 1631
consensus_9581#2 CATTGCTTNTGCAGCGTCAAAGTAGTATCCATCT-TCCACCATTTCCTGTATTCGGATCT 475
* * * * * * * *
consensus_9581#1 -GTGCTAAACGAC-GGCACGCGGCAGTTTGACCATCAAAACGATGGTTCGACTCAGC--- 580
consensus_9581#3 -ATGCNCGTTGGG-NCTGACCGGTGGACTGACCGAGATGATCACAATNNTGCTTCAC--- 283
consensus_9581#0 AATACC-GCTGGA-GATAAGAG-CGTGTAA--AGTTAACACAAT-GTTTAGAAAAGA--- 1682
consensus_9581#2 AATACCAGCTGGAAGATAAGAGGCGTGTAACAGGTTAACANAATTGTTTAGAAGACAGAG 535
* * * * * * * *
consensus_9581#1 TC-CTGTCTGGCT---GTTTGCGCGATTTCCGAAACAAACCCT-TCCCAACACGGGCAAA 635
consensus_9581#3 ACATTCTCTCA------------------------------------------------- 294
consensus_9581#0 --AAACTCCCAC--AAGCATATGTTGTCTGC-----GATTCATGTTTCTACTTAAGTGGG 1733
consensus_9581#2 AGAANCTCCCACGAAAGCATATGTTGCTTATCGAATNGNCAGTGTTTNCGNACGTNTAAG 595
**
consensus_9581#1 GATCGAATACTACAACAACATTCTGACCGTCCTGTTCCACAACGGCATGACCAACAACGA 695
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 TTGTTTTTTTTATAGATGCATTTGAACTGTCTGGGGAAGCAGAAGAAGTACGTTCGATTA 1793
consensus_9581#2 GTGGGCTTGTANNAGACA-GCTCGTATTA----AGAATGCAG------------------ 632
consensus_9581#1 TCAAAACTACGAGATGTGCT---------------------------------------- 715
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 AGTAAACCTATCTAGCTTATATAAAAAAAAAACAATCGAGCATTTGTGAGCGTTCACTAC 1853
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 TATCCTATTCATGTGTTTTGAGTTTTCCAATGTTACTCTGCTGTGTTAAGTGTAGTGTAA 1913
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ------------------------------------------------------------
consensus_9581#3 ------------------------------------------------------------
consensus_9581#0 ATTTTTCTTTCTATCACCCGTATACAACAAAACGAACGAGAAAAAAACGAACAGGAAAAT 1973
consensus_9581#2 ------------------------------------------------------------
consensus_9581#1 ---------------------------------
consensus_9581#3 ---------------------------------
consensus_9581#0 AAACAGTCTGCTACAATGTGCANGTAAAAAAAA 2006
consensus_9581#2 ---------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||